Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA024260

[Submit comment/correction]

Sequence	AA024260
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA024260
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	TCTCACCAAGCCAGCCAGCCCCCGCCTCCATGCTCACCTGAAGAATCCTC GTACATCCCCATCCGCGCGCCATGGCCTCCTCCAAGCTCCTAACCACCGC CATGAACGCCTCCTTCCGGCGCTTCTACCGCCTTGCCTCCTCCTCCCCCC TCCTCCCGCCCGCCTCCCGCCGCCTCCCGGGGCCGTTCCTCTCCGCGCGC TTCTGCTCCGCCGCCGCCGCCGCCACCAAAACCGCCCCCGAAGCGCTAGA CGTCGCCTACTCCGCCGTCGCCGCCGTATCCGCGGGCCACCCGTGGCCGG AGTGGGGCGACTTCCTCGAGAAGCTGCGGGCCAAGGGGTACTTCGAGCGG CCCCCTCCCCCCGGCTCTGATGCCGCCAAGAGCGCCGCCGGAGATGGAGA GGTGGCCGCGACGGACCCTTACGTCATGAGGGACCAGAACAGGGTGAAGA ACGCCTGTCTCAAGTTCGCACGCGAGCGCTTCGATCTCCTCAGGTTGGGA TTTGGGAACCGTGAGGTGGATTTCTTCTTTGCATGAATTGGACTCAACTT TGTTGCATACTGCACCTAGTCAGGGAGGCCTCACTCTGTTTGGAGTATGC AGCTCTTAGAATTGTTGGATACAACGAAAATGATCATGTCTGTAGCTAGG TGAAAATGTAGCAAAATTTGCCAATTTAGGCCTTGATCTGATCCTGAAGT ATAGCATACTCGGTAGTCCTCCATGCAGTATTTTCTTTTGGGGAGTGTCT AGATCTCAGGCGCCTGAGAACTTCTTATGTCTAAGTCGCTGATGTCATCC TAATATTTCTACTAAAATCTCAGTTGCAACCTAGTTGCAACTCATAATAT TTGTACTAATTCTCAGTTGCAACGTAGTTGCAACTCATTAAATTCTCAGT TACACCCTAGTTGCAACTCATGTGTATCTTTCACTTTGCACGAATCATGA GGTAAAACGAACGGTGAAAGAGGCGACTGAGACCTAAGAAGTTCTCAAGC GCCTGAGAACTAGAAAAACCGTTTCTTTTGTAGCTTGTTTTAGTTTCTAC TCAATTTTTCCTCTGCAGTGTAGCATATTTTATTGAGCACTTTCCGATGA TGATGGTCTTGGAGCATCAGCTAAATTCGTTGCTGCATCTTTTTGATGAA CATGTGTTGAATTCATGATCCTCGTCGTAGGATCATATGATTCTATGATC ACACAAACACAATACCAGTATGACTTAAAGTTGTAGCCTGAGTCATACCT GTTAGGATTGTACTCGGCCCTCCTAGGCGTACAATCCCATGGTAGAATTC TGCACACTCCCAGATCTAGTGTAGTCAGTTCTTTGCTGTCCCACAATTCA AATTGTATGGTTAGTCAAATTACTTACAGATTCGAAGGTCCAGAATAACA AGTAGTAGTATTTTTATTTTTTTAAATGGTCTGGTAGTCACAAGGTTGCT CAATTGACATTGATAGCATCAAATGGCACCAAAACAAAACCAAGATTCTA GCGATTAATAATGTATTTGTCAAATTACTCGTTCGATGGCAAAGAAGAAC TCTGTGCAGTTGTGAACTGTGATTTGATCCTAAACCGTGACCTCTACCAG AATGTCTTCAGCTCAGTTCAGAAGTTATCCTTGCCATGAGGATTTTGGGG GTATTTTTGGCTAGGCTTATTTATGACTTTTGGCTTATAAGCCACAAAAG CACCTAAATTCTGGCTTTGTCTTGCAATCGCTGTGGAAGCATCTAGTTGT GTGGCCATTGGTGCATCTGCTTCCAATAGGGCAGCACTCGAGAAGATCGT GGATGGCTGCTGCCGCCCCTGACAAGGGTCGGACGGAGGGCACTCCGGGG GAGAGTAGAGGAAGGAAGGCAGGCGTGCAGGAGGGGGGTGTTACTGCCGG AGTGCCTGTGAGAGACCTGCACACGCGAGAGAGATCACCGTAGAAATCAA CACTTCAGTATTCACAAACCTGAAGCATTACGAGTGAGCCAGGGCGGGGA TTCACAGAGGGTTACTGGGGGTTTCAAGGTGACAGGGGTGAATGAGGACG CCGGGGTGAGGAGGGGTGAATCCAAAAACCAAAACCAAAAGCACCTATTA TGTGCTTTTGTGGCTTATAAGCTAAAATCCAAAAGCCAGAAATAAGCTGC AACCAAACATCCAAATTTAATATTATCCAGAAAGTCATATTGAATTAATT TTAGAATCATGGTTATTGGCAAGTGATTCTGTTATTGGTTACTCTGTTTA TGCCTACTACCTTTGTAACTATATTAGATTTCTAGCTAGATTGGAAATTA ATTTGACTGCATTATTGTTGCAGCTCTCTTCCAAAGCAGGACATTCAAGC TATTGTTGAGTGTGGATGTCCCAATATCTTCCGAAAGGCTGTCAGTTCTG CAAAAAGGCTGAGAGAATTTGTGCAGGTTGACGAAGGAGATGTAAGTTAA AGTGTTCTTCTTTAGTATGTGTTCCCCTTGTAGTGACTCTTAATTTTTTT TAACATACAACAAGTTTCTTTCTTTACTCACAGTTTACCTTGATCTCAAA AGATGGGTCTCATATTTTCTGCTTTAATACAGGCATGCAGCGTCTGCAAA TTACGTGGATCTTGTGACAAAGCCTACGTCATTGCAAATGCTGAGGAAGC TGCTCGGACCGTAGATGTTGTGCGCATACTGCTAACTTATGCAATAGATC CAACCAGCCTTTCAGGAGAAAATCCTGTTGCCGGTGGTGTGCAAGAATCT GCACGCAAGCTTCTCTCAGATCTTACTACGCTTTGTGACACAACAATTGA TCCATCTCTTCCTAAACCTGTACTTCAAACTTCTAGCAAGCAGGATTCAT CGACCAAGCCTGGCAAGGGCACACAATCACATACAAAGTCTAGGGTATCA GCTGGAAATGGCAGAGAAACAGCTGTGACTGAAATGAAGAAGGGCGATTG GCTGTGCCCAAAGTAAGTGTGTTATGCTGCTCCACCTTTCTGTTATAGCG TTATGTGGACCTTGAAGTTAGTTTTCTTTACACTGCATTGTGAGATTGCT AAGTTACCATTAACTGTGTGCTGTTATTTATTGTTCATGATGATCAATGA TTCTCTCACCTCATCTCATGTAAACATAGGTGCCCAATACTATCATTAAC ATCTGTTATTTGTGCACAGGTTTAACTAGATCTGCTGAGTGGTGGAAGTT ATATTTTCCGTAGTTTCCACAGTTAATAGAATTATCGAACTACTCCATGC CATATTACATATGGCCATAGATAGACCTACTCGTGGCATGCGATTACCTT GTCCCATTTGAATGCTTTCACAGTTTTATTACAAGAATCCATTTCATGGT TGTCATTATGTCCTCATGTACCACTAACCGCAGCTTAATTTGTCCTTTTC TTACTGTGGCTTTTATATGATTCAGAATCCCTCTTTATTATTACTGCTTG GTGACCAAAATTTTCTCTTAGATTTTGCTCCTACCATGTTAAACATTCTG AATTTCTTGTTGAAATTGTTCTTTTTTCTTATTTAAGCGTTTGAGTTTGT ACAATTACAGTGTATCCTAATGTACTTAACCTCTTGGGCCATGACAATGC CATCAAGCTCTTGCTGCAGTTCGTTGCTTAAATTTGAAATCTATATTTTT AAGGAAATAAAATTTAAAATAATATCAGTTCTGGATCGATTATCTATAGC AATAATGTATTCTAGAACCAAGTCTATCTGCATGTTCAGCGATAGTCTCT CCATTGAAATTTGGACCAAATAATGTTGTGATGAGATTCCCAACTTCCTA GCATGTCCACATATAGTATCTAATAAAAGATTCCCAACTTCTTATTGTCT CGTTAATGGTTTTTTCTGTAATTTTGCCAGCTGCAACTTCTTAAACTTTG CTCGGAATCGACAATGTCTCGAATGCAAAGAAGATGGACCGAAGAAGATT CAATCAGACACCACTGAAATGAAAATGGGAGATTGGATCTGTCCACAGTA ATTATCTAGTCCTATATACGGTTTCTCCTAGAGTTTTAGCACTGTTCTAT TTTCTTTAATCATTTGATTTGAATGTGCTTTCAGGTGTAACTTTATGAAC TTCTCCCGCAACAAGATGTGTTTTAAATGTGAAGGGCATAGGCCAAAGAG GCAGCTGAACCCTGGAGAGTGGGAATGCCCCTCGTATGTGACCAACACTG GTCCCCTTTGTGACTCTTCCCTGCTTGCAAACTAATCATAAATCATCTCA TTTTATAGGTGTGACTTTGTGAACTTCCGGCGCAACCAGGAGTGCAAGAA GTGCAGCCACGACCGTCCTGAAGATGATACCCATGATAGTAAGCTCGGGT ATGATGTATGGAGAAACACCAAGGGAGCTGACAAGGCCAGAAGCTTTGAC GCCCAGGAAGATGATGATGGCGATGAAGAGGTGCTCCCATACAGAACGGA GCGCAGGCATGTAGAGAGCAGAAGGGCGCCACCCGCCCAGAGGGGTTTCG CTGGCAGGAGTAGGAGGGGTGATGATGGAGACGACTTCTTGCCATATGAA GGGGAGCGCAGACATGTATCAAGCAGAAGGGAGGCACCAGCCCGGAAGGG ATTCAGGAGAGATGACGATGATGACGTCGAGTTCGACGTCGTGCCAGACG AAGGGGAGCGTAGGCATGCATCAAACAGAAGGGCGGGACCAGCTTGGAGG GAATTCAGAAAGGATGATGGCAGCGAAGACGATGTCTTGCCGTACGAAGG GGCGCGTAAGCATGTAGTGAGCAGAAGGGCGAGCCCATCTCCAAGGAGAT TCACTGCTGCTAGAGGCCGTTGAGAATATGTGGTGGCCAAAAGTAGGCCT TGATTTTTTTGCTTGTAGTGGTGACTGTATTGCTTGTGTTGCTCAAGTAA GGTCGTGCTTGTGTTGCTCACGAAATAATAACGGTTGAATATTTTGGGGA CAATATTGACATATTCATATCCTCTGCTGATGTATGAATATTGCCCCAGG GTGCGAGAAAAATTAGATCAATACATCTATTTCTATACGAGGTTTTCGTT GGCTACCATTTGAGTTCAGTGGATATATTCAGATTTAGGAACAGACTCGT ATGTGTTAGACACAAACGCATACAGGCTTCGTCGGAGATAATAAAAAGGA AAATAGAAGACGGTTATAGGCAACACAAATTTAGAAAGAAATTTTCTATT GTATCTAAAAAACTGTTGCTGCAAAAGCCAAACCTGGACATCACAACCCA ATGCAGAACTGTTAATTCTACTACGGCAGGCATCATCTGCATCCTCCAGC CTTAAACCGTGAAAGAGTATGCGGTAGGCTAAAGAATTGTGGAGTCTGTC GGACAACCTCAAGTCTGAAATAGCAAAAAAGAATTGTGGAGTCTGTCAGA CAACCTCAAGTCTGAAATAGCAAAAAAGAATTGTGGAGTCTGTCAGACAA CCTCTGGGCCACCCTACACACCAGGGTTAGCTGGGCAGGAACGATCATCT ACAGCCATCGGATTGCTCCATCAAGAGAACCCTAGCCGTTAATCACGCTC TGGCCCAGAAGGTCAGAATGCATCAACCAGACTGAAGTGCTTGCCTCCTT ATTAGTAAAGGATGCAGCGGTACGATCCTATAGAACAGATCCTGTTCAAG TAAGGTCGTGTTGGGGTAGCTCAGTCTCCGCCTTATAAACCGGTCCGAAC GTTACTCAACTGGCGAGGTGGGACTAATGTTCCGCACCCGACGCCTCTGT GCTACGAGCTTTGCGAGGTGGTTCGTGAGTCATGGCCCGTGTCGTTGGGC TTGGAGAACACAGACGGCCCAGCGGATCTGAGAAAAATATTTTGCATCGT ATCGTCACTCGTCAGTCCAATCTGATCGCAGCTGCCCTCGTCCTTCTCCT CTCTTACGTGGCCGTTCCGCCGCCGAAGCAAGCAGCAGCGGAGACGGCCC AAGCAAACCCGCCGCCCCCTCCGCCGCGGAGGAGGAGGAGGAGCTCGGCG TGACGCCGCTGCTCCGCTGAGGCTGTAGGCGTCGAGCTCCCGGACTGGCA GCATCGGCACACTGTCCTCGTGCTCGCCAGAGCCAAGGTAGGTTTCCCAT CTCGTGTCGCGTGGCCATTTCTTTTTCTCCGGCTCTGAACCCACGCCACA TGAAGGATAAGCAGTTCTGAACATTATACTTCCTGCTCGCCAGGAGCTAA ATCTTACCTAAGCTCTTTACCTTGTTTTGTTTTCTCCTATGTTTAAGTGC ATACTGTGCAAATCGAAGATTGTAGTTAGCTTCATCGTGTTGATACCACT GCAATACCGTACTGGTCGATGTGTAGAAATTTGCCCCCACGGTTCAAAGT CGACTCAAACTAACTTGAGAATTGATTTGACTTTGTAAATATTCAGCGAG GAATTGTAGTCCATGTTGTGCCTTGCCGTCCATAATGTTATTCGGTGTAA CACATAGGGACATTGTCTGTACTTGTACATAAACGTTCAGCAAATTGGGT CTAGATTTTTTATAAAAGATCATGTCAAGTGCAACCTCTGTATGCCAAAG TTCTTTTAGACCTCAGCTTTGATTTGCCACATGTATGTAAAACCGAATGT CATCTAAAGAAATTAAAGTATGCCAATTGTGAGTACCTCTGTTTTGATAC ATTCAGCAAAAAGGGATATTGGTGTTTCAAGGTCATCATGTAAACTGTCT CTGTTTGCTCAAGACTTTGTTGAGGTGTAACTCCACTAGATTTAGCTATA ATATACTAGTCCTGTTGGTTTCATAAATTTTCTCAAACATCACCAATCTC AATGAAGCAACTGGTATCATGGATTCTTGGAGCCATGAAGACTTCTCATT GCAACAATTCACTAGCTTTTACTGCCTGAAAGACTACATCGAGTAGGTTT ATAGAGAACCTGGAACAGGAATTTACCATTCTTAGTTCGTCCTGAAGATG TATATTCTTGTAGTGCAATCTTGACATGCAACCATTTTGCCAACACAATG CTGGACTTCCATAATTTAGGCTAGCGTAATTGACAATCCTGTATGATGGT AGATCGAAATGTCAAACGCGCAGTCGTCAGATAGACTTTAGCTGTAGCTT TTATAGGATGGTCCCATTTTCTCTTACCATGGGTAATTGACAGAATCAAC AATTTTGAAAACATGCCATGTTCTTGCAGGTACGAGCTACGTTCCATACA AAAAGAAAAGGTAAGAAGGATGGAGACAGAAAACGGGAAGCCAAAAGATG CGATTACTGTTGAGGTGGAGATGCAAGAATCGAAGTGCGGTAGAGAGTCT CAAACGTTTACAGATGATTCAGAACATCATGGTTCTTAGTTAATGTACCC ATGCTCCGAAAATTGCTCTGACTTTTTGCCAGCTTATTCCAATCCCACTT TTGACATGTGAACAACAACAGGTTTACAAATCTGGAACCTACGGAAGGTC GCTTGATATCACTAGGTTTAGTAGATATCACGAACTACGTAGAGAACTGA GGCGCCAGTTGGAAGATCCTTTGAGTTCAGGCTGGCAGCTTGTATTTGTC GACCGGGAGGACGATGCCCTTATTGTCGGTGACGATCCCTGGCAGTAAGT TCTGCAAGCATCCTCCTAATGATGTTTTGTGACTCGAAACCTTTCCTTAC AGTGCTGGCGAGTGACGTGCCTTCACATGTGCAGGGAATTCGTGAACAGC ATGTTCTGCATAAAGATCCTCTCCCCGCAGGAGGTTCAGCAGATGAGCAA GCAGGGCCTCAAGCTCCTGAGCTAGGCCCCAGGGAAGAGGCTAGGTAATA GCAGCTGAGACGACTACGTTAGCAGGCAGGAGTCGACGAGCCTGAGCACC AGGATCACGTCCGTCGGTTTGGTCGAAGTCGAGTTCTGAAGAGAGGTTGT TTGCAGCTTAAGACTAGCTCTGCCGTGTATGTTTCCGCAGCCTCCCCTCC GCTAGTTTTTTGAGACCTGGAACTGGAAGCACATAGATCATGCCTTAGCC TTTTAAGTCTATGTACCATCCATTCATCCTGAACTGTGACCTCTACCAGA CTGTCTTCGGTTCAGGACAGAAACTGGCAACCTTGCCATAAGGACATAAG GACTAAATGTTGCCCAAAAAGTCATTGTAATTATTTTTAGCATCATGGTT ATAGGCAATTCAGCAGTGATTCTGTGGTTGGTTACTCTATATGAACATGG CCCTTGCCTTTTGGGTGCAATAAAAACAAGATCAATACAACTATTTGCGT GATAAACATTGTGTGCCAAATAGGCATATCTAATTTGTTCTCTTGCCACA TGGATATATGTATCGGACACGGCGCATAGAGGCTGAAATCCGTCGGAGAT AACAAAGAAAATAGAAGGAGGTGATGCATGCCAGAGCCAGACAAAGGAAG CTCACAAGGAAATTTACACTAGTATATTAAAACTGATGCTGCAAAAGCTA AACCTCGATATCATACAGTTTACAAAGAAAACAGAAAGAAACCAGTAGGT GGAACTGTAAGTACAAGTCCTCTTCTGGTATCCTCTGCATTCAGCCTTAT TCCGTGAGACTCCAACACACATGACACTTCATACTTTGCTTGTTAACACC AAAAGACAGTGCAGACCACTACATCTACTAAATGATTCGAGTCACGACGC CTATGAAGTCAGGCATCGGTCCGAAAACCACTTTCAGATCGCCTCCCTGA TGACGAGGTTGATGCCGAACGACGCCGTGCAGAGGATCAGCCCGATGATC GCCAAGAAGTTGAGCCCTCTGCGGAGTTCACCAAAAGGAGAAAAGTTAGT CAGACAAATACAGAAAACAACCTCTGGCAAAAAGAAGTCTGCATTGGAGA AAAATGAACTGATATTACGCATAAGCAGGCGTCATACGCCGCAAATTTAG TTCCAGGTCATTCCTTTTCCATACTCAAATCCAGAGCTCACGGCTTTGCT AGGGTGATCATTTTATAAACTGAGGTGGTTGACATAGGACAGAGGCTTAG GTAGGATTGCGGCTGTACAAGTATGTCAAGTGCTGACAGACGCATGGCTT CTGGCCTACTCCATATCCAATTATTCAATGACCTTATGATGCAATGTGCA GGAAACCCCACATTAACTACCAACCAAGGTCTTCACCTACCGCAGTGAGC GACCTATGTCAATTGGGACAAGGATGTGCAGGCAAGTTGCAGCTGGGGTC CTATGATGTATGATCTGATGGGGCCTGAAGCCAAAACTAAAGAATGAAGA ACTGAAGATAAAGGGACGTCTATGTATTCAGGAGGTTGAAGAAGCGCTTC AAAGCTACTCCGCGTTGTCGGTGCCATTGATGCTCGGTGAGCATCACTGA AGCCGCTTGCACCTTTGACATGTTCAGTTAATTAATGGAGCACCACGTTG AGCACTGCCTACCCACTCCCACTGCATTAATGAGTTGAGTGTTTGGTTGA CCAATACTACTCCTAGAATCAAAGGCGTGGGTCATATGTTTGCAGCGCTT ATAAAGTCCCAAGAAACTACTACTACTTGAGCATACTATAAATCATCAAG TGGATATCTATTGCTTCACAACCACACAGATTTGGATGTCATTGTCAGCT AGGCAAATTATGTGCATATGGACCAGTTGGGAGGAAACAGACAGCAACAT GGGTTGTTCATTCATTGCTGCTAAGCAAAGCATCCAATCCATACCCGAGC TTGAGGCGGTTGTCGGGGACTCCGGTGGCGTATCCCTTGAAGTAGAAGAA CCTGGCGAGCGTGTAGAGGGTCCCCAGCGCGGCGGCGATGACGGGGTGCT GCAGGCCTCCGACGAGCACCGTGACGAAGAAGAGCGGCATCATCTCGAGC GAGTTCTGGTGCCCCCTCTGCATTATTTTCCACGCCACAAAATTTGACAA GAATTTTAGTACTACTCAGACAGGAAATCAGTCCACGGAGGGAGTAAAAA GGAAAAAGAAAATCTGGGCGACGGACCTGGACGCAGTTGAAGAGCTTGGC ATCCTTGTTCTCCGACTCGACGGCGTACAGGGTGGGGTAGAACACCTTGT ACCTGAGCAAAACAGCAGCAGGTCGTCAGATTCTCCCAACACGAAAACGA ACAGAGCAGGGGAGAAGGGGATTTGGCGCGTACTTCCTGCGGGCCTTGCC GACCTGGAAGCTCATCCAGAAGTTGAGGAAGGCGTAGGCCACCACCGTGA GCACCACGTAGCCGTACTCCTTGGTCAGCTCCATCGACACCGCCATCTCT TCTCCCCTTTCGTCTACCTTGGTTTCCCTTCCTGGATTCGTTTTCCTTTT TCTTCTCCCTTGGAAACGCCGTTGCCTGTTGTGCAGAGGATGGGTGGGGA GTGGAGGTCTATCTTATGGGAGGCCGGAAGGGTCTAGAAGTCCTGGGGCA AGTGTGCCTGCCCTCCGGCCCAAGAAAGCTTTGACCGATTCCCTCGGGCC CAGCTCGGCCACGGCACCCAACCAATGGGCTAGCG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.