Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA004284

[Submit comment/correction]

Sequence	AA004284
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA004284
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	CGAGTGGTACCGGCCCTTTATACGAAAAGGAGAAAAGAAAAGTGCCTCTA ATCTCTAGACATTGCTGATTCGTTATTCTTGCCTGCCCCCACAGCTCCAT CGGGACGCCTCGCCTCCACGCGTCCTGCTCTATCCCCTCGCAATCCTGAT CGACGGCCAGCGGACAAGCCAATACAGGACCGACGGCTGAGAACTGTTCA TCCTTTTTCCTTTTCCCCCAACCTTCTTCACCTTTCGTGTTCGCGTGGTC GTCGTCGTCGTCACCATCGCCTCCCCTGTTCTATATAAGCTGGCCTGGTC GAGTCGGACAGTTGGGAGAAAGAGAAAGGAAGGAGGTTGCGTCCCGCTCG TCTCACTCATCCACTTGTCTCGCCTCTGGCCGGCCCAGCCTTGCGGTGCT CTTCCAGATTCCGATCGGAGAGGAACAGGGATCCATCCGGCCCGGAGAGG GATGGGGCAGGACGGGCAGATCCGCCGCGACAGGATCATCATCGACACGG ATCCCGGCATCGGTGCGCCTCCTCTCTCTCTCCCTCCCTCCTCCATTGTT TCTCTCGCTTAGGTTCCCCTGGACTTTTTCTACACGGAAATTCAGTCAAT GGTGGAGTTCGTCAGGCAGAAATTAATTACAATTCTCGTTTGCGTCTGCC CGTAATAACTGGAAAAAATGTCCAACTTACCTAGTAGCACTGGCACGAAT TTCCTCGCACGTGGTTGGGTAGCAACTGGCGTTTCAGCCCAGCCCGCCGT TGAAAACGATGGCGCCGTGCCGCCAACACGATGATCGCGACGGTTTGTCA TCTTCCCTTTAGTCAGTGGAGCCGAGTATGCAAAACATGTCATACTGGTT GATTTTTTCTGCAGTTGGATGGAGTAGCAGACTGAACAATTAACTTGCGT ACCACTAGTTTACAGCAACCGGAACTGATCGTGTGAGAGTTGTATATTCA GACTATATTGACTTTTTCCTATGGGCTTGGAGTTAAGCTCGGAGCTCCCA CTTCTGATCAGCAAGTTTGAGGCACCAGTGTACACTATTTGCAAATGGTA CACACCCTTTTAATAATATCCATAGGCACGGCATGGTGGAGGTCCTGGAC AACACACAGCCGTCCTTCTCGACACGATACGGGATGAGGCCTGTTTGGTG GGCGAGAGCGAGGCCGTTGGCCTAAATGCGCTGCTACCGGGGGTTTGTAG CTCTTAGGCATATAGCGTTGTAATCTCAGGGTGTTGGTCATGTCCTGCAC TTGTGCATAGCTTTTCTTCTATCACTGCATCGGGACACAGCGCCTTTATG TTTTCTCCAGGGAAAAAGTGTCAAAAGGTTCAATTCCATTATGCACAATC TTAATTGTAAGAAGTTAAATTCCTATATCCTCACTTCTCACTGCCTGCTT CTTCTGCAATCTGGTTTCTAGATGATAGCATGACAATCCTAATGGCTTTT GAAGAACCCAGTGTGGAGATCATCGGGCTGACAACCATTTTTGGCAATGT CACGACCGAGTATGCTACACGCAACGCTCTCTTGCTGGTGAGCAACGGAC ACTGCTGGATTTTGTTTTCTTCTGTTTCTTGGGTTCGCTGACCGTTTTGA TTCTTCAAAGGACAGTGTGAGAGAGCAGGGCATCCTGAGGTTCCAGTAGC AGAGGGCAGCCCTGAGCCTCTTAAGGTACAATGTGGATCATATTGTAATT TCACACATTTCAATCTTCACCATGGCTTTGCAACTTGACATTTCCTATTT AGCTCAGGCAAGTGCACAATTCATGTCATCAATTTATAATGACTCCGAGT GTCTGCTATCCATCAAAAGCATTTTTTTTTTACGGTCAGATGGAAGTACA AGATGCAATTGCTTTTTTTTTTCCATTCTTGTACAAGTGGGTGATATGGC TAAGATATTTTTTTATTTATACTACACATTGTCATCATATGCTTGTTGAT ATTCGGTAGTTGGTAGTGTGGCGTGTCACATCAGCATCCATATTTTATAT GGTAGATGGGGTTAAGACTTGAGACTTCCAATAATACTATGCTACCTACA GTTTCTGTTGGTTAACTCAATGATTAATGATATGCCTTCTGTATTTTAGG GAGGAATTCCACGTGTTGCAGATTTTGTTCATGGATCTGATGGCCTTGGT AATTTGTTCCTTCCTGCACCTACTACTAAGAAGGTCGAGGAAAGTGCTGC CGAGTTCTTGGTTAATAAGGTCTCCCAGTTTCCTGGAGAGATCTCTGTAC TCGCCCTGGGTCCCCTGACGAACGTAGCATTGGTATGCTTACAGTTACAG GATAAATCTATTAACCAGTTTGTGTATGACGTGCAATTTTCTAATAGGAA GCGTTTGCTATTTCTTAGGCCATCAAAAAGGATTCTTCCTTTGCAAGCAA GGTCAAGAAAATAGTTGTACTGGGTGGAGCTTTCTTCGCGGCTGGAAATG TCAACCCGGCCGCTGAAGCAAATGTACTGTCATGTGCATTATACACAACG CTGCTGCATTAATTTTTGAGAAAGCATAGACAGCAACACACATATTAAAC CTTGAATGCACAACTCTGCAGATCTATGGAGATCCGGATGCGGCGGACAT AGTTTTTACCTCAGGAGCAGATATTGATGTGGTTGGCATTAACATAACAA CTCAAGTCTGCTTTAAAGGTTTGTCCCTTTATATCAGCAGCATCTCCATA GTTCAAGTTGTGAACATGGGAGGTTAATTTCTAGCCCACCGTGTGAATTT CTTTGATGCAGACGAGGATCTGTTGGAGCTAAAAAACTCAAAAGGGAAGC ATGCACAATTCTTGTGTGACATGTGCAAGTTCTACAGAGATTGGCATACC AAGTCTGACGGCTTCCATGGTACTCCCTCCGTTTAGAAATATAAGATGTT TTAGGTTTGTGAAGGAGATGTATCTAGATACCTTTTAGTGTATAGGTTCA AACGAATCTAGACACTAAAAGGTGTCTAGATACATCTCATTCACAAACCT AAAACATCTTATATTTCCAAACGGAGGGAGTAGTATATTGTAGCCCTCTC CTTTTTGTATGCTTTTGCTAACATTGACGCTAAATCTGCAAAACCAGTTT CAACTGATCATGACATTCTATTCAGGGATTTTCCTCCATGATCCTGTGAG CTTTACAGCCTTAGTTCATCCTGAGTACTTCACATTTAAGAAGGGTGTCG TGAGGGTTGAGACCCAGGGCATTTGCACCGGACATACTTTGATGGATCAT GGATTGAAAAAGTATGTATCGTACTGTTATAAGTAAATAACATCAGTTCT ACTTACTTAATGTTCTGACATTTTTACAGAGATATCCATATGATGATATA AGCATCACATGCGCCCAAACCCACTATTCTGAATTTAGAACAGGATGTCA TGCTTCTGCAGTTATTCAGTTATCCACATATGTTACTGATAGCTGTCTCA CATAACATTACAGGTGGAATTCAGAAAATCCATGGTCAGGTTATGCACCG ATTTCAGTCGCATGGACAGTCGATCTCCCCAAAGTCCTTGCATACGTGAA GAAGCTGCTGATGAGCGATGCGACGACAATTTAACAGATGTTCTCTGAGA ACAAGAGATCTGCCCTGACTGTGTTGAGCTGAAGTGTCATGGTTCAGATC AACTCTCACGGTCAAAGTAATCTCTTCTGTTCTTAGAAGCAAGCATAGGA AGAAAAGGAAAGCTTCCTTGTGAAAACAAGCATTGGGGGTAAATTCTGCA TATGACAGACAGCATTGTAACACATTGTTTTCAAACATTTATACCAAGTA CTACATTTAAAATTTGGAAACAACTTCCCAGTACGCCTTGTTACTCTGTG CCTGTCGGTGAGCTCTCATTTCTGTCTTTCGCGTTTCTGTCTCTGCACCT GTTTATCCAATGAGAAAGATTGATTGCGCGTGCTTAGGACTAACTCTGAT CCATCGATAAGATGTCGAACTGAACATGGATTGGCACCAGTTCATGTTTA GAACTGCTTTCCTATTTTAAGCCCTTATTGGAATACATGATTACACTTGA CCTTGATACATAGAGATTGTCATTACATTTCATTTTCATGACATGGCCAA ATTACACAAACGTAGATATATAACACCAGAATACATGCTCTTTTATCACT GATGGATGGTGCTTCTCCAGTACAATACTCCAGTAGTCTACTGGTCATCA GAATAGTTTTTCTTCTTTTTAGCACATTCCAACAATACAAGAACAAGGAG CGTGGGATTGGGATTTGCCTTTTTTGCTCTTCTAGAGAAAATATGTCGTA AAGGTTGGAGGAAAAACTGCAACTGCTGCAGCTTTACTTGAGCACATACT TGAGGATACCAGGTATGTGGATCTTGTAGAAGTACTCGTTCCAGTCGACG GTCTTGGGATCGAAATTGAACAAGTCGTCTTCGGGGCTGGTCGGTGCTGC CATTGTCAACCTCAGCCGCTCCAGGTTCATGTCGTCGAAACTTTGATCAG CCAAGGAAGAAGAAGATATTTTGGGAGATCAGTCAGTTAGTACTTGTCCA TGTAATTAAATATCTCGGGGATTAGCTAGCAGCTGTAGTAGTAGTGATTT AATTACCATCCTCTGAAGAAGGCGAATGGCCCGTAGACGTCGACGAGATG GACGACGAACTTGTACTTGCGGTTGAGATCTTCGTAGAGCTGCGAGAAGA GTCCGCAGAGGAGCAGGTTGACCAGGTGCAGGATCTCGAGCGGCAGCTTG TACTTGATGAGCATGTAGAGGTGGAAGCTGGCGATGGTCTTGAAGAAGTG CATCTCCTTGGTGGGGATGACCCTGCCGTCCTTGCCGAGCCTGGGGTTCT CGTAGAAGTGGCGGCGGCCCGACTCGTAGAGCACGCCGTAGGGCGCCGGG TTGCGCAGCGAGGAGGTGGTGTGGTACATGACCTCGGCGCCTTCGTCCCC GGAGTGCGCCACCATGGCCGCCATCATGGCGTTGGCCACCATGTCCCCCG GGATGACGTCCATGGTCAGCTCCAGGTCCGCCAGGAAGCACGACAGGTTC TGCTTGGCGTAGCCGATGATGATGGTGTCGATCGTCCTCGTCCCCTGCAT CCACCCCGGGAGCGGGTCCCGGAAGATGCTGGTGATGATGCTGGGCCGCA GGATCACCACCGGGATGGCGCCGTGGAGCTGCCCCAGCAGCATCTCGCCC ATGGCCTTGGTGAACACGTACGTGTTGGACCACCCGAAGTGGCGGGACCG CTGCAGGCCCAGCTCCTTCATGGCCTTCCGCTCCGTCTTGTCGCTCGCGT CGTCGCCGGCGGCCAGGAGGAGCTGCTTCTTGACGTCGCCGACCAGACGC AGCTCGGCGTCGATGTCCAGGTAGGTGCCTTCCCGCAGCGTCTCCCCCTT CTTGAACGGCTTCTCCATGATCAGACCTTCCCTGTCACCCGCTGCAAACG CTGCATCCATTTTTTTGTCGGTAAGAAGTACGGCCATCGAAATTACTACT ACAGTACATTCCACAAATCGTGGAGACAAGAAAAAAAAAGAGAATCTACT GACCGGTGGAGACATGGAGGAGCATCTTGAGATTGGCACACTTCTTGGCG AACTGGCACAGGTACTTCACCCCCACAACATTCACATCCAGTGCGACATC ATATCTAAAATTAACACGTATATTGTGTGTGTGTGTTAGAAACAATAATA CGCAATTAGAAATGTGTATTATATCATGATTTTACTTTATAGAAACAAAA CAATTAATGTTATTCATGGAGACACCTTTCATAAAAGTTGGTGGTTGCAG CTCCATTGACGATGATGTCCACCTCTTTGGCCAGCTCCTCTAACATGGGA GCATCTAGCCCCATGTTCTCGAACATGACGTCGCCCGCTAAAGGGACAAT CTTCTCCTCCACAAACAGCTCGAATCCTCCTTTGCCATGCTTCTCTCTCA GGAGACAGAAGAGCTCGGCGTCTGTTACCTGCACACATCACCATCTTCCA TGCATCCATAAAACATGCACCCTAACTTTATGAAAATTTCAAATAAAGTA AATACTACAACCCATGATCTTGGAGATGTATTGGGCATACGAACATGCAC ATGCCCCATAGTAATAACTACAGTACATGAACATGGGCATGTCGTATCCT ATAGTGGATTACTACTACTAGCCGTAGTACCACACTACCACGGCCAGGGG ATCTATTCCTACTTTTACTCCTCTCTTTGGGCTGAATAATTATTGGTGGT GTATATATAGTGTGTGTAGGGTACACGTTCATGGGCTGACTCCATTCCAC AAACCAACCAACCCTCCATATGGCGCATTCATTGGGTGTGCCTGCTAGGC TCATTACTTCCGACAAGGACACGATATTCATTAGGCCGCGCTCTCCATAT TGATGGCACGACCACGGTTCTAAATATGCGACGTTTTAGAAAGTTTACGT CCAAAGTTCTTTAGTTCCACTGATAAAGGTTTGTTGGTTAGGTCAAGTGG TACCATTAGGGTTGTCATGAACATTTTTGTTCCACAATAAAAAAATCATG ACCTTGTACTTATACCCTTATAAAGAGAGCACCTCACTCTTGATTAGAGC CGTTGGTTGCACCTAAGGAAGATGCACAAAAGCACAAAGCCAAAAGAATG AAAGTAAAAGAGTCCAGTTTTTTTACCCTAGACATGGATCTAGCATACCG AGTTTTCTACACTTACCACGACCAATTGACTCGGCCTTCTAGAGATAGCC GGGAGGGTTAAATAGACTGTGTTTGGTGTGAGTCCAAGCAAACCAAATCA AAAGTTTGACACTCCATATTTTGGCTATGATTTTGTTTGCCCATGTTTTG ATCAATGTTGGTATAGAAAATGTGCTAGAACATGACCATATTTTGGGGGG GGACCAAAATTTTATCAGGGTTAGATTTAATTTGTTCACAAAATAGAGAC ATACCGATCGATAATACGAACTCCGTATGCAAGAGACTTTGGGGTACAGG GGTAGGTGCTGCCATGACGAACCATCATCACTGCTACTAGATCGGCATGC ACGGTGCATGGCGTGACTCAGCATATGCATGGATCGATCGATCGCATTCA TGGCTTGCATGTTAGACATGCCAGAGATGGAATGCGTTAAATTGTACGTT GCAGCAGAGATCAGGCTAGATAGATACAGTGCTCCATTGTACGCACGCAT GCATGTATGTCGCGCGTGGTAATTGGTAAACACAGTAGAGCTACATGGCA GCGCACTAGCTAGTCTCGAATTGAGAGGTACGTACGGGCAGAGATGGACG ATGCTGAAGGACGGGCGAGAGACAGAGAGGTAAATTCGTCAATTTAACAC GCGAGAATTGATGAATCCATGTGCTGATGCTTCTAGCTGCTGCATGCCAG TATGCCACACAGACACACACTTGGATCGGAAGATCATAATTGGCCACAAT ATGCATGGGAAATCTATACCATGTCCATATGAGTCATGACCATTTTTTTA CAAATCCATGCCATTTATGGTTTGTAGTAGGTAAATTAACCTATTAGATT AAACATCGGGTTAGTATATATATGATGTAAGTTGGAGTGAATTAGAATTA CCTCTGCTTCGACGCGTTGCTTTGCGGACTCGGCGTCCATGGCCCGCACG AGGAGGTAGATCTTCCTCACCTCCGGCTGCACTCGGAGTATCTTCTCCAC GAGAACTGTATGCATACAGATAGATCAGCACAAAAATCGACCAGACACAG ACAGTACCACAGGCCACAAAATTCGACGATCGTCAGCCACAAACATCATG CACTTGCGTGGGCAATGTGCATTACGTACATGGCTGTGGCCAGTGCCAAT TAAGACAGTGGAAGAATAAGCTAAACTGTAGTAGTTTTTTGTGTACTTAC TCTTTCCGAGGAAGCCAGTGGCGCCGGTGATGAGGATGCTCTTGCCCTTG AAGTACCCCGCGATCTTCTCCGCGTCCAAGCTGCCATCCATCATCACCAT GATCAAGAAATCCTCCTCCTTCTGATCTCCTTCTTCTTTCTCCTCTTATT GCTTCAGACAGAGGATGGTATCTGGAGGGAGAAGAGAGAGATGAAGAGAG CACAAAAGGAGTGGCCGGTGACTGCAGGTGCGCGCCACACGTATTTATGC AGTTAGGCGATGATGCCACACTGCATACGGGCAGCATATGCATATGCATG CACGCAAGCAAGGCGGGCATGGCATGGCATGGGGTGGGTGTGATGAGCG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.