Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA003846

[Submit comment/correction]

Sequence	AA003846
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA003846
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	CAGGAACAGCGCGGCGCGGCCATTGCCGTCCACCGCAAACCGACCCCACC TCTGCACCGTGCGGCGCGCGCCCGCCTTGCCTCGGCTCCTCACAACCACC CACACCAACCGCAGCGCCCGCCCTCCATCCAGACCGTCTCCACACTCTCG CCAGTACCCCGCCCCCCCTGCGCGCGCGCACTCCGTTTCGCCCGCCGCGA CGGGAGCGGATGGCGACGGCGAGCGCCCTCTGCGCCCCCATGCAGCTCCT CTCTTTGCGGCGGGTAAGAAACCCCATCTTGTAATCATGTTAAGGTTATC CTATATGCCTTTGTTTATGTGCCCGTCAACTGTTCGTGGTAATGTCTGCG AGGCGCTTATCTGCGTTTGTTGATGCCCAGGCACCTGCCAAGGAACTCTC GCCTCGGAGAGCAGCCGCGGTAGCTCTGTCAGGTACCACCCCGCTTCCCT AGCACTTTACATACAAGGGTGTAACATTCTTTGTTGCGAACGTAGGGCCT TTTGTGTGGTGCAAGATAGACGACTCTGACTTTCTGTTCTCGTTGATATG GTAATGCGTTGAGTTGCCTGGATAGAACCGTTCTAGATTAATTGATGCAG TGCAAGTCATTAATTAGATCAAAGTAATCTTCCTTCGTTGTTGGCTTGGC GCGATGAGTGTCGGGAGGATGAAGAAGGGAAAGGAGGAGGATGAAGAAAC AGAAAAGGAAGGGTGGCTGACCTCGACGCCAGCGACCGAAGAGGCGACGG TGACAGCGCTGACAGGGGTGGAGCAACAGAGCATTTCCTGATTGGGGTGC CATGGTGCCTCGACTTCACACTGGTGGTCACAGATCTAGCCAGAGCAGGC GCAGAAGTGGAGGAGGCAGCTCAGCTACTGCGTGGAGCAGAAGGAGGGGA AGATCGGCGGTCGGGATTGAAGGGAGGAGCCGACTTGGTTGCGAGGAGAC CTGGCGCAGGGAAGAACATAGTGTCGCGTGGTTTGTCCGCTAAGCCTAGG CCGCGGATCCATACTGTAGCACGGCACTATTTAGATTATTATGATATAAA GGAGATAATTGGGAAATGACAAAGCTCTGCTCATCGCTAATATCAAACTT CCCAATTATCATCCTTTTTTGGCAGCATTGTTTCATTGTCTGAATGTTGG TGTTCTTATGTTTCGCCAGGTTCACTTATTGTGAAGAGAGATTTTTTACA GAACGGGAGAAGTCACCACCGATTTTTACCATTGAAACAAAGAGGAAAGT TGCAAGCAGCAGTACTACCTCTTACTCCACTGCTTGATGATGAGGAAAAG AGGAAGCAGATGTCTGAAGATTATGGGTTCAAACAAATTGGAGAACAGCT ACCAGATAATGTTACTCTTAAAGATGTCATGGATACTCTGCCCAAAGAGG TACCAACTAGGCAAATGACGATACCAGCTATGCTGTAGATGTTTCCTATT CTAAAGTTCTTATGTGAAACTTCACTCCTGCTAGGTATTTGAGATCGACA ACGTAAAAGCCTGGGGATCTGTTTTAATATCAGTTACTTCATATGCTTTC GGTATTTTCTTGATTTCAAAAGCTCCATGGCATCTGCTTCCCCTGGCTTG GGCATGGGCTGGTACAGCAGTGACTGGGGTAAGCTCTCTTCCTTCCAAAC CTGCCTGTGGATATGCATGCACATGTGTTGCATGCTTGCTTGCGTTTTTC TATGTGGTCTGTCCACGATCTAATCGATTTTTTTGTGAAGTTTTTTGTTA TAGGTCATGATTGTGCGCACAAATCATTTTCGAGGAATAAGCTAGTGGAG GATATCGTTGGAACTCTAGCTTTCTTGCCATTAATTTACCCTTATGAACC TTGGAGATTTAAGCATGACAGACATCACGCCAAGACAAATATGTATGTAC ATATCTCCCTGTATAATCATCTCGAATATGGCGCAGATGATGTTATTGGT GTTCATGCTAATGACTTAGTACTAAAAACCTTAATACTTTCATTTCGATG CTTTCAGTTCATGCATCGCACTGCAAGAACACCCATGCACCACCTTGTGC ACATATCCATATGGCAAACCAAAACCAGTTCTTCTACCTATTTTCCTTTT ATTGCTGCAACTCACATGCCAAATGCCACCATGTACAAATATATATGGAT TGCAAATTCTTTATTCACTAGCATACATACAAATCAGATATCAACAGTTT CAATCTTAGTTTTGTTATCTGTATCATCTCCGTACTTGAAAGCCATATTG TAACTTTAAAGCCTTGAACATTTCCAATGATGTTCTGCTTTGATCATTCC AATTTTTACCTTTTGCATACCTCCAGGTTAGTAGAAGATACTGCATGGCA ACCTGTTTGGCAAAAGGAAATCGAATCGTCTTATTTGCTAAGGAAGGCAA TTATATTTGGTTACGGTCCTATCAGGCCATGGATGTCTATTGCTCACTGG TATGTCTTTTCCAACATCTGTCAAGTCACATGTTCTGATGGTCATTTGTT TTGTTGAATTAGTTCTCATTACTTCGCCCCCCCCCCCCCCCCCCCCCAGG CAATAACATCTCTGTTGTCTGTGTAACTTGTCAGGTTGATGTGGCACTTT GATCTTAAAAAATTCAGACCAAATGAACTCCCTAGGGTGAAGATAAGTTT GGCTTGTGTGTTTGCATTCATGGCAATCGGATGGCCGCTAATCATTCTCC AAACAGGGATAGCTGGATGGTTCAAGTTCTGGTTCATGCCATGGATGGTT TATCACTTTTGGGTACATTGCTGATTTTTGTTACTATGACTTACTGCAGA TGTATAGTATCCAAGTTTGTTGTCCTGTTAAGCTGTTTAAATCATTATAC TAACTGTAAAGTAAACTCATGGTAGTTGAATAAGAAGCACTTGCTTTCAT ACGGCGGGAGTCATTGGTTCAAATCCAATAGTAGGTAAGTAGGTAGAAAA ATTGAATATAGTGAATCTCTGAAGTCTGATCCATGGAGTCCCCAAAATTA TCTAGAAGCCCGCCTAATTGTGCAGGCTTCCACCTAAGAGGTTGCTAAAT TTATAGGGGGAAATGTAATCATGCCGTCAAACAGCTTTTGCAGTCTAGTA GCCATAGGATTTTCCTTTATTGCATATAAGAGTAAGTGTCTGCAGTTTTG CAATCTGCACACAGTGATCTTCGTATGAACTTGGAAGGTACAAGCAAGCT AGTAGTCTTCTTCAAATACACAAGTTTATATTCTTCTTCTGACGCTGAGA ACAACTGCTACACTATAATACGACTAACATTGACTAAATTGGCTAGAAGC CTCAAGAGACACTGTTAAAAATGACCATGGTTTGATATACAATGCCTCGA CTCAGTTTGACAGAGCAAGGAATAACATACAGAAATGGATAAAAATATGT GGTCTAAGTTATCAAGTACTATCAACTTACTGCATTCCTTATGAGTTTGT ATGCTGAAAGTTAACTCTGTAAATTTAACCATTTGCTTCAGATGAGCACC TTTACTATGGTACATCACACTGCTCCTCATATACCGTTCAAATCTCCAGA AGAGTGGAATGCTGCACAGGCGCAATTAAATGGCACAGTTCATTGTAGCT ATCCTCGATGGTACAGAATATTTATCTTTGCTTTCAAATTTTTTTCCATG GATATTTGGACTCCTGTTATGATCATATATGTTAAATAAACTTGCAGGAA CTGGTCATGATGTTGATTTTTATTGCACATGGAATTAGTACGACATGATA AAACAATGACTTAACTTGCAAATAATAGGACACCTCATTTATTCATTGCA TCGTCTTCCAATATAATTAAGAAACTTCGTCAACATTTATGTTGCTATGT TTCTGGATTGTAGATATTATTTTTTAGTTTGGATATGTGCCATGAGAAAA TATTACGGGGCCATCCAAGTACAGTTTTGAGGTCCTGTAAGGATCAGTCA ACAAGGCAAACACGAGATTTTTGGGTGAACTCTGAACAACGCGAGAGAGA GACGAGAGTTTTGTGCTGCGCACTACTTGCAGCTTTTCTGGTTCTTTTCA TTCACTATTTATTCAGTCTTACAAACGGATTGCTGAAAAAGAGGATCGTG GACCGATCCTACTGGAGAGTGCCATCCCACTCCCGATCGTATCCAACTCC CCTGCTATCTCGCTGCATGATCTGGGCTGTGCCATCCCACAGGCATCCTA TGCAGCGACTAAGTCTAAAATTGAAAACAACCTAGCTACTGTCAGCTGTA ACGTGCACAAACACACGCCACACTCTGAACTTTATTCAGACTAAGTGAAC TGCATTGATTTAAGCCAACAATCTCCCCCTAAGAGATGCAGTTCACTCCC TGGATTTCGACGACCTTGATCTTCTCGCAAATCTTCTGAAACCTTACTCT GCCAAGAGCCTTGGTAAAGACATCTGCAAGTTGATCATCTGTACCGACGA ACTCGACAGACACAGTCCCATCCTCGATGCAGCCTCTGATGAAATGATAC CGCACCTCGATGTGCTTGCTTCTGTCGTGGAAGACTGGATTTTTGCACAA TTGGATAGCAGACGTGTTGTCCACAAACAGATTGGCGACCAAAGGAGCTG TTCCCAGTAGATCGCCAAGCAAACGCCCAAGCCAAACTCCTTGGCAAGCT GCAGTTGCTGCTGCCATGTATTCAGATTGACAGGAGGACAGCGACACCAC CTTCTGCTTCTGACTTTGCCATGACACTGGGCACTCACCAAAAAAGAACA GAGTCCCTGACGTACTCTTCCTGTCATCAGGATCCCCAGCCATGTCTGAA TCGCTGAATCCCACCAATTTCACCCCATCAGGGCTGGAGGCATACCGGCA GCCAACATTCAGACTTCCAGAAATGAAACGCAGCAGATGTTTCACTGCGC TCATGTGCTCTGTAGTGGGTTTCTCCATGAACCTGCTCACCACTCCAATG CTGAAACTGATATCAGGCCTTGTATGGACAAGGTAACGAAGGCTGCCAAC TATGCTCCGGTACAGCGTGACATCAACTGGTGGATTCTCGCTGTCCTTGC TCAGCTTCAGGCGTGGCTCCATGGGCACCAGAGATCGGTTGCAGTCCGTC ATGCCTGACTTCTCCAGCAGTTTCTTCGCGAACGCAGTCTGCTTCAGAGT GATCAATCCAGGTTCCTGGCTCACCTCAATGCCAAGGTACAGAGTGAGTA AACCCAGGTCACTCATCTTGAAACGGCTGCTCATCTCCTGCTTGAACGCT GTGATTGCTGTGGTGCACGCGCCCGTCACGATGAGATCGTCGACGTATAC TCCGAGCAACAGGCGCGTGTCCCCTTCTCCACGGACATACACCGCATGCT CTGACTCGCTTCGGGCAAACCCAAGTGACACCAGGACAGTGTCGAGCTTG ATGTTCCAAGCTCGAGGAGCTTGGCGCAGGCCATAGAGAGCTTTGTGGAG ACGGAATACCTTGCTGGAGTTGTTCCCGTCGATGAAGCCCGGCGGCTGGC AGACGTACACCTCCTCACCGAGCTCACCGTTGAGGAATGCCGTCTTCACG TCCATGTGGTGGACTTGCCACTTGAATTGAGCGGCGACAGCTAGCAGCAG CCTGACGGAGTCCAGACGCGCGACGGGAGCAAAAACTTCATCGAAGTCAA TCCCCGGCCGCTGAACGAATCCTTTAGCGACGAGCCTGGCTTTGTGCTTG AGGACGTTGCCAGCGGCGTCGTGCTTGAGCTTGTACACCCACTTGAGGCC GATTGGCTTGTGGCCAGCGGGAAGCTCCATCAGTGTCCATGTCCCATTCT CCTCAATCGAGTCCAGCTCCGCTCGCATCGCCTTCCGCCATGCCTCGTCG TCCTCAGCTTCTGCGAGCGTGGAAGGCTCGCCGGTAGGCGTGAGTAGGAG TCGCTCCGCCCTTCCTGGGTTCGCCGCGCCGGGATCTATTAGATCCAAGA CGGGGCGGTAGCGGCGCGCTTGGCTTTGGTCAGTGGCTGCGTCCAGGTTC TCTTCCCCTCCACTTGGTGGTGAGACAAAGCGGACAGGCTGCATGGAGGA GGGCGAGATGGACTGACCCACTGGGCTCGGCCCACTGCTGGCCCGTGGAG GTGACGACGCCACTGGGCCCGATGGCGAAGCTGGAGCAGGGGCGTCTTCT TCTCTGAATCTCTCTGATGCTGCAGCTTGAGGCTGTGACAGCGTCCAGCT CTCCACCGTCAGAGGAGCGGAGCTGCCATCGAGCTCCCCCCAGTTCCAGC CTGTACCCTCGTCGAAGACGACGTCACGGGATACATGGATCCTCTTCCTC TCTGGATCAAATAGCCTGTACGCCTTGCTTCCGGGCTCGTAGCCCAGCAT CACCATCGGACGAGATCGATCGTCGAGTTTCTTCAGCCCTGGTCGCGTCT CCTTGGCGTACGCCTTGCAGCCAAAGACACGGAGGAAGTGGACGCTGGGT TTACGGCCGTACCATCCCTGGAACGGAGTCATGCCCTCCAGGCTCCTGGT CATGGACCTGTTGAGGATGAAGACAGCAGTGAGCGCAGCCTCACCCCAGA ACTCCGCAGGCACGCCCATGGCCTTGAGCATGCTTCTTGTTGCGCCAACA ACCGTCTGATTCCTTCTCTCTACCACCCCATTTTGCTGTGGTGAGTAGGG GGCAGAGAGGTGGCGCTGGATGCCGCGGTCCGCGCACCATTCTGCGAATT CTGCTGCGGTGAATTCACCACCACGGTCAGTGCGCAGGATCCGCAGCGGC CGCCGTGACTCCAGCTCCGCCTCTGCCTGGAATCGGCGAATTGCTGCTGC TGCTTCGTCTTTAGTCTTGAGCAGCGTCAGCCACATGTACCTGCTGCAGT CATCGACAAGCAACAGAAAGTAGCGCTTGCCTCCGTGAGTCGCCGGCGTG ATGGGGCCGCACAGGTCGCCGTGGACCAGCTCCAGCGGCTCGGTGGCGCG GTATCTTGCTGCAGCAGGGAACGGGGCACGGCGGTGCTTGCCCACAACAC ACGCTTCACACAGCTGCTCTGCGTGACTGATCGCAGGGAGGCCACGCACC ATCCCCTGTTTCTGCATCTTCTCCAGGCTGCTGAACCCTTGATGGGCAAA CCTCGAGTGCCAGCGCCACGCATCCTCGTTCGCGTGCGCAGCGAGGCACA CAGGCTGGACGATCTTCAGATGCACAACATACAGCCTGTTCTTTGTCCTT GGTACCTTTGCGATCAGTACCTTGTCAGCGTCACGAACGGTCATGTGACC GTGCTCAACATGGGTGGGGAAGCCGAGCTCGTCCAGCTGCCCGATGCTCA CGATGCTGGACTTGAGCCTCGGTATCCAGTAGACACTGGCGAGCTCGTGA TGCCGTTCGTCGTCGATGGCGAAGAGGACGGTGCCGCGTCCACGTATCTC GACGACGGAGCCATCGCCGAAGCGGACCTTGCCGGAGACGTTCTTGTCTA GCTCAGCGAAGACGCGCTCCTCACCGGTCATGTGATTCGACGCGCCGGTG TCAAGATACCAGGAAGCGTCGAGGTCATCCGGCGTGCGCTTGAGCACGAC GCGGGCACGCTCCTCGTTGAGGTACACCTGCTCTCCCGCCAGCAGAGCTG CGGAGCCGTGTGCAGCGGGTGACAGGCACGGCGTGGGCACCGTGTCCTCG AGCTCGATGACGGTGGCCATGTGCAGGCCTGGCGCGTCTTCTTCCTCCTT TTCGGCCAGGTTTGCCGATGCTGCTGCGGCCTGGTCACGCTGCTTCTTGC GGCACTCGCGTTCCCAGTGCCCTTTCTTCTTGCAGTAACGACATCGGTCG CGATCGACCTCGCCGCCGGCGTCAGGTGATGAGGTGGACTTGGGCTGCGA CTTGGCACCCTTTCCGCTGCTCCCCCCGCCGTCACCGCGGTTGCGGCTGC CCGAGCCGCCACCACGTCCCTGCCTGCGCTTCTCCTCCCACTGCTCTTTG GTCAGAAGCAGCTGACCGCTGGAGTCGACGTTCTCCGCGGCGAGGCGTTC GTCGACGGCGCGCAGGTGACCGACGACCTCCTCGACGGTGAGGGTCGCCG GATCCATCATTGTCTCCATCGAGAAAGCGATCTGCACGAGCCGGCCTGGT ACGACTGAGAGGAATTTCCTCACGATCTTCTCGTCGTCGCAGGCGTCGCC GAGTGAGCGCAGAGTCGCGGCGAGGTTTGTGATCCTCAGCCCGAACTCAT CAACGCGCTCACCATCCTTGAACGTGATCGTCTCGAACTCCGTTCGCAGA TGTCGCACGCGAGTGTTGCGCACGCGATCATTCCCTTGATGTTGCATCCT GATCGCCTCCCACGCCGCCTTGGCGCTTCCCTTGCCGATCAGCATCGGGT GCATCTCCGCCGGGGTGGAGCGCAGCAGCGCGGCGAGCGCCTGCTTGTCC TCGCGCCGGGGGACGTCATCGTCCTCGATCGCATCCCAGAGGGACGCGGC CTGCATGTTCACCTCCATCACCATGGCCCAGTTTGTGTACTCACCGCGCT TCAGCATCGGGAAGACGAGGCTGGCACCTCCGCCGCCGCCGCCGGTCTCG CGCACGACCTCGCGCTGCACCACGATCTCCCCGCCACCACGCCGTCCTCT GCTGCGCCCGCGGCTTGGCGAGCGCCGTCGCTGGACGGGCACTGGAGTGG TGGATTGGCGAGGCGGTGGAGTGTTGCCAGTGCGCTGGGCTGCAGGTGGT GGAGTGTTGCCGGTGTGCTGGCCGCCGCCGGTGTGCTGGCCGCCGCCGTT CGACATTGCCTTGCCCTAGGGCTCTGATACCAACTGAGGTCCTGTAAGGA TCAGTCAACAAGGCAAACACGAGATTTTTGGGTGAACTCTGAACAACGCG AGAGAGAGACGAGAGTTTTGTGCTGCGCACTACTTGCAGCTTTTCTGGTT CTTTTCATTCACTATTTATTCAGTCTTACAAACGGATTGCTGAAAAAGAG GATCGTGGACCGATCCTACTGGAGAGTGCCATCCCACTCCCGATCGTATC CAACTCCCCTGCTATCTCGCTGCATGATCTGGGCTGTGCCATCCCACAGG CATCCTATGCAGCGACTAAGTCTAAAATTGAAAACAACCTAGCTACTGTC AGCTGTAACGTGCACAAACACACGCCACACTCTGAACTTTATTCAGACTA AGTGAACTGCATTGATTTAAGCCAACAAGTTTTGACTACAAATTAAGAAA ATGTTCTATGTAGCAGCTAAATTGAACTTTGGAGTTTTGATCCTAGTCAG CACTAACCTTAGGAATATCATAATACTTCACTTCACTCGAGTGCATAATG GACTGTGCAACGTTTTGTGAATATCTGTGATAAATGATGTATGTAAAATT GTGAGTACTGAGTGCAAGTGCCAATTTAGGACAACTGGAGTAAATCGAAT CATCTTCCCTGTCTTGCCAAATTGTCTTGGAAACATGATCCTTCTGTAAT TGGATTTTATCTGGCTAACCTATTATTATTTTTACAGGATAGAGATCCTT TGCCATGACATAAATGTACATGTCCCACACCATATTTCTCCGAGAATTCC AAGTTATAACCTTCGTGCTGCCCATGACTCCATTAAGAAGAACTGGGGCA AGGTGCTTTGATATTTCTTCTTCTAGCTTTGTGCATTTTTCTAGTTCTTG ACAACATAGCTTCATTTATGCCCCCTGGATGCCTTCTACCTGCAGTATAT GAATGATGCCGACTGGAATTGGCGGTTGATGAAGACAATATTGACTGCAT GCCATGTGTACGACAAAGAGAGATACTATGTTTCTTTCGACGAGGTCGTA CCCGAGGAATCTCAACCAATCAGATTCCTTAAGAAGTTCATGCCAGATTA TGCTTGA

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.