Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA003580

[Submit comment/correction]

Sequence	AA003580
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA003580
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	ATGGCCACGGCGACACCGCAGAAATGCTGCCTTCCCGCCCCCGCGAGCCC TCCTCCAATATCCGCTCGCCTGCGCCTGCCCTACCTCGCCAGGGGAGCTT CTTCCTGCCACTTCCCGGGACGCCGCACGGTAACGGCAAGGAGAGGAAGA ACCGCCTTCGCCTTCTCTCCAAGGTAGCAAATTAGCGCTTCCCTATGGCA AATGATGCAATCCCCGGACCCGTGTTATCTAATTTGGATTGGGTTCTCTT CTTCTGTGTTCGCGTAGATGCACGTTGGAGATGGCTGGCCCAGCCTTTGA TCCTCTAGGGCTCTACAAGGAGGACCCTTCCAGCTCTGATTATCAGTCTC CCTTATCGACATTCTTTGGCATCCTGTCTCCGGTGTTCGGGAGCACCAGT GGCTCCAGGAAGGAGAAGTCATCCTATGGCCGAGGAGCAGCAGGTTGTAA TTCGAAACTAATCCCTTCTCTATCTATTATTTATGGCAAAAGTAATCTTA TCCCTCCATCCAGAAATAAGTGACTTGGATTTATGTAGATTCGTATGTAT CTAGATGTGTTTTGGTGTATAGATACATGTGAATCTTGACAAAGTCAAGT CACTTATTTCCGGACGGAGGGAGTATTATTGGTTGGGCAATGCTTTAGAT GGATATAGGTATGTGTTTATCTAAGAAGTATTAATTGTATGCTACCATAC AAATATGTTACTTTGCACAAATGCTATATTAGTTTAGTTGAGAAAACTGT CACTCCACTGCTTGTGATTTTTTTGTCAAATCGAAATTATTAAAGGTATG GGAGAAAGCCACCCTGTACCTCCTTGTAACTAGTAAACCTCAAGGTCCTC GATAGTCGATACCGATGAAACAATCCAGATCTTGATTACTCATCCACTTT TGTCAAATTTTTTTGAAACGTTCACGGTAGGACCTGAATATATTGCTTGA AAAGAGCGTTACAAGACCAGGCTCTTGTCCACCCTTGCGGGTTGACATTG GTCAGGATACATAAGATTGTTACATTAGAAAAGGAGAAAGGAGGACAGCT TAAACACTTGAGCAACACTATGGGGCCTATGAGCACGACAACCATCACCA GGAGACAACACACATGCACTAGACCGAGGAGTGCCACTGGATGCTATTGA AGGGAATCACAATACCGAGACCTTGCAAATGCATCACTACCCGCACACAG GCGGTCATCCAGGAGCTGCGAATTCGAAGCAAAACGGGTCAACGAGTGTC GTCAGCTTTGTCAAAGGGCCTTGCTCCACCGAGACGGCATTTCAGATGAG AAAGCACAATGCCTTCGAAGGGCATTACAAGACCGAGATTACACCAGACT TCACGAACCTTGACCAGAAGCTCTGCTGTAGGGACAACAAGAAGCACTTG CGAGGAGAGGCAGGGCTTTTACACCGTCAAAGGGTGCTGGTGAACCGAGA CCACAGCAGAAACACGAAGCTCAGGTCAAGAGCAGCGGCAGTCGCCGTCA GACAGAGCCCAGCTTGCGGGGCAAATAGCATAGAACCAAGCTTTGTTGCT CTTAGCTTTCACAGCAGACCGAGAACTGAGGTCAAAGGAACCATATGGAC TGCGAGGACAACGCATCGCCGCCTGATACCCCAAAACATCAAGGCAACCT GAGAGGAAGACATTGACCGGTGTTCATCGAAGGTGAAGTCACGGAGCACC ACAGTACAGTAACATGCAACCGAGCCAAGTCTGGAACCTCTCATGCGCAC GCCCCAGTCAAGCAGGACAACCGGCGTTAATGGCGAAAACAGGGGCCCCT CACGACGTCTCCAAGAGGTGTACGATGCCCACACGCGCCATCATCGCAGA GCTTGACCTCACCTGTACGTCCATCGAGATCATTGGCAGGAGGTTGGGAG CATGGAGCAGCACCGAAACCATGCCTCCAGCAAGGTTAGTGACGCCGTGG TCCGCTCATGCAGAAGCATGAGCACGGGCTTCCCCAAGTGGCAGCAGCAT ACTCACGAACCTCACCAGATCGAAACCGCCGAAGGCGAGCTGCAGGGGAT CGAGGCGGAGCAGTGGCGCACCGCGGGGCAGATCCTGAGCGGCGCGGGCA TGTTGGCAGAATGCACAGCTGTGCATCGTCTTGGGCCACGAGCAGGAAAG CCGCGGATCTGCAGGTGTGCCATCTGCCGCAGCGCGCCCGTCGGCGTAGG CTAAGGAGGCCAGCTGCGCGTGCCACGTTGGAGCAGCACAGGGGGTGGAT CGACGCCAGGGCAGGGGCACTGCGCATGCCCGGAAGAGCAGCGCGGGCAG CCAGACACACCAGGAAGGAGCCGCACGGCACTCCGACGCGGAGCAGGGCC GGCCGTTGTCGGCGCAGAGGCCCCCTAGTAGGCTGGATCGCGGTGCTTGA CGGATCGAGATCTGGAGCGATCCGTGAGATGGCTTCCTGCGGCCCCAGCG GGGGTAGAGGGCGCGGTTTGGGCGGCTTTTGGCGGAGGCGGTGCGGTCAC CTCGGGGACGCCTGGGAGCGACCCGGAGGTGGCTAGGGTTTTCACCCAAG CCTCAATTTTGTCAAAATTTTAACCACTGTATCTTGTTGATAAGAATTTT GTTCAACTAAGTCTAAAATTCAATCTGAAGTTACCACAAATATGTCCATG CTGTTCATTTATTGTGAAAAGTTTTGACCTAGGCCCTAGGGAGTGCCTAC CCAACTTGCTTGGGACAAAAGGTTTTGTTGCTGTATGAGTGCCAAGTAGA TTGCTAATATTTGACTCCCTCTGTTCCGAAAAAATAAGGCATAAAAATGT AGTAAAAAAGTCAATGCTTCTAAGTTTGACCAATTTTATAGACAAAACTA TGAACGTCTACAATACCATAAAACATAATTTAATATAGTATTTATTCAAT ATTGTGGATTTCTTCTATATATTTGGTCAAACTTAGTAAGCTTTGACTTT GACTAAAGTTTATGTCTTATTCTTTTGGAACCTATGCAATAGTATTTAAT ACTCCGTCCCAAATTGTAAGGCGTCTAAGATTAGTGAAAAGTCAACGTTT TTAAGTTTGACCAAGTGTATACACAAAAATGCTAACATCTACAATACTGA ATAAATATCAACAGATTCAACATAAAGTATATTCTCTCAATGTGTCCATT CAATATTATAAATGTAGATATTTTTTCCTAAATATTTGGTCAAAGTTAGT ATGATTTGACTTTAACTAATCTTTTAGATGCCTTACATTTTGGGACGGAG GGAGTAGCAAATTTCCCGCCCAAGTCCACTTTAGTTTATTCAGCTATATC TATAATGCACTTTAATCCAATTTGAGCAGCTGCATTGGAGGATAGTACTA TTGACATTGGTGACTTCTTCAAGGGCCCTCTACCCGGGAAGTTTCTGAAG CTCCTTGGGTTTTTGGCCTTGTCTCGACTTGGTGTGTATATACCTTTGGG TGGAGTGAACCGGGAAGCTTTTGCTGGTAATCTTGACCAGAACAGTCTGC TGGGCACTTTAGATTCTTTTTCTGGTGGAGGCATTGGCCGGCTTGGAATA TGCTCCCTTGGCATTGTTCCATTTATCAATGCACAGATTGTGTTTCAGCT TCTTGCTCAGCTTTATCCAAAATTGCAAGATCTTCAGAAAAAAGAAGGGG AGGCGGGTAGAAAGAAGATCCTTCAGTACACAAGATATGCATCTGTTGGT TTTGCAATTGTCCAGGTTAGATTCTTGGAATATTGGGCAGTTCTTGGATA TTTTTTGTCAAGATAATTCTTTGACTAGTTAAAATTACAAGAACAGCTGC TGGATTTTTTTTTGATGTCAATACACTTGGTTCAGAAATATGCCAAAGAG CACTGCCTGGACACATGCAAGTTCCTTGTTCAGTTCTTTGGTACCTCAGG TTTCCACGGTTCCATGGGGGCACCTCTTGTGTATGACTTACTCGTGTTTG GACAAATGAGCATACAAGCTCTGTCATGTTTTGTGATCACATGCTATATT AATTGAGAATGCTACTTAACAGAATACCATGTTAAAAAGTTTGGACTGTG TCAAATATGCCACACAATTTGACCACATAATTTGCAGTATCAAGGAATTT GACACTTCCATTTTTTAAATTATACATTTTATATACATCGTTGATATTAT CTTTGACATGGCAAAGAAAATTTAGAACACAACATAACTTGTTTCCTGAT GCTGAGATGTGCATGTGCTTCGCAGAAGTAACTATGCTGTTGAAGGTTAC AAATAACAAAAAACAGTTCTGGTATTAGTGAGTTAAGTTTTAAGCTTCTG TTGTCAATAATTTGGGAGAATACTATATTGTTGTATCTATGTTGCATTTT AATACACTAGTATTGAAGAGTTATCGATTATGAAGGTCTAATTTTGTTGT GAATGTAAGTTATAATTGTTCTGTTTATCTTTCTGGTCGCTTCAAATATA ATGTGTACTTTTTGCTAGGCTATTGGGCAAGTTCTTTTTCTCCGTCCTTA TGTTAATGACTTCAGCACGGAATGGGTGTTAACATCTGTCACACTATTGA CGCTTGGATCGGTGTTTACAACTTTCCTTGGTGAAACAATATCTGAGTTG AAACTCGGGAATGGAACGTCACTTCTTATATTTACAAGTATAATATCGTA TTTGCCCGCATCATTCGGAAGGACAGTTGCGGAGGGTTTTCAAGCAGGGA ATTATGTTGGACTTCTCACAATCATATTATCATTCTTTTTTTTAGTTCTT GGGATTGTCTATGTCCAGGTGAGCAAGTATACTTCGCTTTTCAAGATGCA TAGAAATTTATTTATGTATGCTATTTGCTTAATTCAGAAGATTTGTGTGG TTTTAGGAAGCAGAGAGGAAAATACCATTGAACTATGCTTCTCGATACAG TAGCCGAGCTGGAGGCCCCCAGCGTTCTGCATATCTACCTTTCAAGGTTT GCCTTCCTTCCATATGGTTTTATTTAATTTATGTGTCCACACATATGGTT TTATTTTATTTTTGTCTCTTGATACAACAGTTACAGTTTGGAAACTGTCG ATTATTTCAAAGCATTTTTTTCAGCTTACACTGAAAATAACTCATTTTCT TAATACTATCCTGAGACGTGTATGGTTTTTTGGAGAACATGCAAACACAT CTTTTCATTAATAGAAGAAGCAAAACCATAATTACAAGAATTCAGATATG CAGTACATTCACCACATAGCACAAAACACCACTTTATACTATCCTGAAAC GTGTATGGTTTTTTGGAGAACATGCAAACACATCTTTTCATTAAGAGGAG AAGCAAAACCATATACCAGAATTCAGATATGCAGTACATTCACCACATAG CACAAAACACCACTTATACAGCAGAAGGACGGGTGTGGACAAATGGAGCT CGGGCTCCATGGAGCCTGTATTTTGAAAAGTTCAAAAACAGCATTTTGAA TATTAAAAAAAATCTGAAAAATACCTAGATGTAGATAATGTTGTGCTTTA CTAATGTGCAAAAAATCAACTCAAAATACCTTATATTCGAGGCTACACAA AAATGACAAAATCTGACATCTAAAGTAGTGAACAGCGCAAAATTTCAAAC CTCTCAAATCTGTCAGATTTTGTCATTTTGTGTAGCCCTGAATATAAGGT ATTTTACACGTTGGTTTAGTACAACATTGTCTCTACATATAGGATTTGTT TCAGAAGTTTTTGAAACTTTAAAATATTGTTTTCAAATTTTGAAAAAAGG GCTCCATTTGGGGTTTCCACACAAGGACCCTGTAGTCTATTCTTAAGGCG GCTCTTACGACATACGTGTATGCATTATGACGGTCTGCGGGAGTTGTCTA TTGTGGTACATTGACTCAGTGAGGTCTGTGTGAGGGTTTGACAGGTGTAG TGAAAAACAGTATGCTTCATCACTATAGTCTGATGGATATTTTACAAGAT CAACAATTTTGGGTCAGAAAGTCAAAACTTACCTTGAATCAGCGGTAGTG GCATGGAGGAGGGACCCTTGAGTTCTGATGTTATGCAATAAATAAATAAT GGCAGATCCATAAAAGGGAACTCCCAGTGTCATACTGTAACACCACCTTG CTGATGTAATCGAAGGCGTGAGATCTAGCAATTGATAGAAGGATACAAGG GACAGAAGAGAAGAAACGTGAGGAAAAACATGATCTCGATCAATTGGTTC ATTCAAAGATTACCTGGATACAGATGGCACACCCCTCTGGCTTATAAAGC CACCCACACACACTTAACTTGCGCACACGTCACCCTCTGGTAACCCACAC TCGATGGGCGCCTTTCTCACTTACGTCTTGACTGGCTCGTCATTCTCTTT AGCCCATGACACATACACAATATTTTCTCATATTTGTTCGAATGACTCAA CTCAGCATATAAAGTTTAGATTTGAAATTCTATATTTTTTAGTTTCTCAG GGATATGTCCCTTTTTTGAATAAATAAATAAATATTTTTTAGTTTCTTTA TGTTAATCTCTTCCCCAAAAGCTTTGTGATGTTTGAGAGGAACAATTTAA AATCTCAAAATCATTTTCTAGCTGTCACATGAATACAAGAAAGGAGACCG GGGAGATACTTGCTCCCGTGGGGAGTTGAACCTGTCACATGCATGGAACT GGACATGTGGAATTCATCATTTGTTCATTTTCATGAACCAACAAAGATTC ATAGCATGTTGGACTATGCAAAACATGTATTTGTTTCTTCATTAGCAAAT GAATAAGATAAAACTGCTTTTATTCACAATTGTGCTAACCTCTGTTTCAT ACTTTTCCTGATGTTCACTTGTTTTATGACTTACCGGTTGAATTATGGAA GGAATTAGTTCTTACTTCAGTTCCACTACGAGCAGGTCAATAGTTCCGGT GTCATGCCTATCATATTTTCTACATCTTCATTGGCTTTACCTGCTACTTT GGCACGATTCACTGGCTTAGATATTCTTAAAAAGGCTGCCATAGCCCTAA CTCCAGGAGGTAAACTGAGAGGTTTTCTAGTTTATTTTGCAACTGATATT TGTTTTTTTAGGGAGAATTGGAATGCCATAAAACACCTATTGTTCACAAT TAATTTCATTCTGTTAAATGTCTGCTACAGGTTCTTTCTATCTTCCAACT AATGTGATGCTTATAGCCTTTTTCAATTACTATTACACTTTTCTTCAATT GGATCCTGATGATCTTAGTGAGCAATTGAAGAGGCAAGGTGCTTCAATAC CGCTTATGCGGCCAGGAAAAAATACAGCTGCCTTTATTAAAACA

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.