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GrainGenes Sequence Report: AA045945

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Sequence
AA045945
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA045945
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
CCACGGGAGACGGGGGAGAGGCGGTAGCGATAACAGGCAGCTAAGCTTAA
GCTAATGACGTCTCAGCCACTAGGAGACGAGTCAATAGGTGCGTAAAGAA
AGTTACCCGTCCGGCCGCTGCCTGCGTCAGTGGCCATGTCGGATCCACCC
ACCCACCACCAACACCAGTAGGCAATAGCTGCTGCGGCGACGGCGACGGC
GACTTTGGTTTCGGCCTCGGCGGCGGCGGCATGAAGAACTTCTTCAGGAA
GCTACACATCGGGGAGGGGTCCGGCGACGGCGCGTCCTCGTCGCCTACCC
CTCCGCCCTCCCGCAAAGGCACAGGCGGAGGCGCGGTTCACCATCCGGTA
CCCGAGCAGAGGCAGCCGCCCTCGGTGGTGTCCAGCTGGCTCGACTCCGT
CCCGACCCGCCCCCCGCCGCCAACGCCCCCGACCCCTGCGGAGGCGGAGG
GCTCGGCGTCCGGGTCGCCGTCAGGGGAGGAGAGGAGGCAATCGGGCGCG
GGCGACAGGAGGCGGGCGCAGCAGGAGGAGGGAATGGAGCGGAGGCAGTC
GCAGGAGAACGAGGTAGAGAGGGAGAGGCGGCGATCGCGGGAGGAGGACG
CCGTGGAGGAGAGGGTCATAAGGGAGTCGTCGGAGGCGGAGGAGAGGAAG
CGGGAGAGGGAGAAGGAGGAGGACGACTTGGAGGAGTTCCAGCTGCAGCT
GGTGCTCGAGATGAGCGCGCGGGACAACCCCGAGGAAATGGAGATCGAGG
TCGCCAAGCAGATGAGCCTCGGCTTCTGCAGGCCTGCGAGCTCCACCTCT
GAGGTCCTCGCAGCTAGATACTGGGTCAGTTAGCAACCTAGCCCTGCCTG
GTTCGATAATCGATTTCACTGTCCATTACTCTTCTCGCAAATTAATTGTG
ATCATTCATTACGATAATGCTCATTGCATGTATCATCTCTAGTCTTCTAG
CTAGAGCATGATGCTGGTATAACCCTTGTTAGATCGGTAACAGTAGCAGC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
GCAAATGGGTAGTCAATGGTCCCTTTGGAACACAGAAATTGAAAACCACA
GTAATTGAATCACATGGAATGCTGAACTCTACAGGAACAAATAACTTTGA
CTGCACCATATCGGAAAAGAATGTGTCCTATGTAATTGGGGTGCAGTAAA
GCAATCCATAGGTCCATCTCATAAGTGATAACCACTTTCATCTACGAATA
AACACAGCAGGGTAATGCTTATCTCTTGTGTGAGTTCTAGAGTATTTCTT
ATAAGCTTACTACTAGTAGTAGACTGGTAACAGTAGGAACTCTCTTTAAT
CAAAGTACTTCTTCTAAGTTTATGTGTTTAGTAAGTTAATTGTAATCTGT
TGTTGTATAATGCATGAATGTTGGTTCAACTTTGTAGGAGTTTAGGGACC
ATACATTGACACAAATGTCATCTTTGATAGTGTTTCTTCATATACCACGT
ATCCTGGTGTTTCCATTTACTTAAACGTTCCCCACTTATACTGTACTGTT
ACCATTTGTTGACACATATCATATGATATCCTCGCAAATGCTTCACAGAA
TTTCAACGCCCTTGGTTATGATGACATAATATCAGATGGCTTTTATGATC
TTTATGTCACTGGGAATGGGCCAGCATCAATAAACATGCCCTCTCTTAGT
GATCTGCGAGCGCAGCCACTTTCACATGATAGTGTCAATTGGGAAGCTGT
ATTGGTCCACAGAGGTGAAGATCCTGAGCTTATGAAACTTGAGCAGAAGG
CCTTACTCACTGCTCTTGAACTTCGACAGAGAACTTCAGAACTTGTTGGC
AATGTTTTGATTCATGAACTTGCTAATCTAGTTGCTAAACACATGGGTGG
AATAATATTTGACCCTGAGAACATGTCAGTGAAATACCAGAACATGATCA
GGTCCCTGAGAACACATACTGAAAGTGTAGTTGTGCCTCTTGGACAATTA
AAAAATGGACTTGCTCGTCATCGCGCGCTTCTGTTTAAGGTTAGTAACTT
ATAAACATGTTAAGCATTTTTAAATGACAGGGCCTGTCTTTGTACAAACA
GAATTTGCGAAACATGAACATTGAAGACTATCTGTTATAATGTTGTAGAT
TATCAACTTCAAAATTCATTTCACAACTCCAAATCAACATTATTATGTCT
CATTGTGCTAATATAAAAATGTGTAACATCCTTTTTTTGCTGTTCTATAA
GTACCGAAGACATAACTCAGCAAGCCATCTGCACAACTTTTGTTCGAAAT
GTATTCCATCAATATGCTAACAATTACTTCGCTGACATGGAAAAACACTG
TGCAAGATATTTGTCCATTAGTTGATTCATTAGTGTGCTGACAATTATTT
CTCTCCATGTTTGGATGTAGGTTTTGGCTGATAGCCTTGATGTCCCCTGT
CGACTCCTAAAAGGAAGACAGTACACTGGATCGGATGATGGAGCTTTGAA
CATTGTGAAATTTGATGATGGAAGGTATTACACCCTGTGCATACTCAGCA
TAATATGATTTTTCCTCACATATGAGCATTTGATGGAACAATAGATATTG
GACTTGCTTCATCCACTAGAAGCTTTATAACCATCTACCCATTTTGCAGG
GAGTTCATTGTTGATCTCGTGACAGATCCAGGCACAATTATTCCTTCAGA
TGGTGCTGTTTTGTCTACAGAATTTGAAGACAGCTCCGTCTCAGATAATC
ACCAGTTAAGCAAAGCTGATGCGACCAATCAGTTGGGATCTTCTCTTAGT
GGAGTGTCAAATTCTGCATGTGATTCTTTTGAGTACGAGTTACTTGACAG
AAGATCGACATCTAGCACTGTAGGTCCTTCTGATACCGATGGAGCCGCAA
CTAGCCAGACAAGCAATCAACAAAATGCACTATCAAGTTCGTTTGAAGTT
TTATCAGTTAGCACATACCCTAGTGAAAATAAGCCTTTTAACGAATATAG
AAGCACAAACGAAAGTGTGGCTTCAAAGAACAAAGAAAAATCAACAGGAG
CAAATAATTCTTTGTCAAGTTCACCTTCATCCCCAGAAGTGGGCAGCAGT
ACAGGTTTCCGGAGGATGAAAGTAAAGGATATCTCAGAATACATGATTAA
TGCTGCCAAAGAAAATCCACAATTAGCACAGAAGATCCATGAGGTATTAC
TTGAAAACGGAGTAGTTGCACCACCTGACTTGTTTTCAGAAGATTCAATG
GAAGAGCCAAAGGACCTCATTGTGTGTGACACCACCCTGTTTCAAAGCAA
GGATGAAATGAAAAGAAGGATGAACGAAGTTGGGTCAAGGGAATATGCTG
ATCGTGGTCATGGTCCATTACCATCTCATCATCCTGGACATGAGCTCCAA
TCAAAAGTTGTGCCTCACCGGGCACCTTTAGATTCACTTAAGCCTATCGA
AGGTTTAGGCATATACCCAGCCCCTGATATCCGTGGTAGCCCATCTCCTT
ATTTTTCTCATTATGAACCATCAGCACCTCCCCAGGAAACTTCGTCACAG
CTCTCAAAGCAATTGCCTGTTACGGCTGCTGCTGTTGCAACTGCTGCAGT
GGTAGCTTCTTCGATGGTTGTCGCAGCTGCAAAATCAAACAGCGATATGA
AATTTGACGTTCCTGTTGCAGCCGCAGCCACTGTCACTGCAGCTGCAGTT
GTTGCAACAACAGCTGCTGTTAGCAAGCAATATGAACACTTGGAGCCTGG
TAATCAGATATTTGGTTTACCAAGTACTTCTGAAAGAAATGAATCAATTG
AGAAAGCTGCTGATCACTTTTGGGATAAACAGCACAATGAAATCGGTCAT
GTCCAAGATAATGCTCTAGATCAAGAAAAGGATTCATCTGAAGTTCCCCG
GGAAGCTGAAAGAACCTCAGACAAATCAAGCGGTACAGAAAGTGCAAAAT
CTGAAAGTGCCCTGGACGAGGTTGCAGATTTTGAAATGCAATTGGAAGAA
ATTGCAATTGGTGAACGTATTGGCCTTGGTACTGCTCTTGTTTTCATATA
AATGCATTTTAGCCCCGTGAGGCAACTATTTCATCTACTGTGATTATCTG
GAATTAGCATAATACAATTTCAACTTTTTTTAATATGCATGCAACCTTTT
ATGTTTCAGGATCGTTTGGCGAAGTTTATAGAGGAGAATGGCATGGAACA
GTAAGTCTTTCAGTTTTAGATGTACTCGTATAATTTTAAAATTTATCAAC
GAGTTCCATGTTTGTTATCTTAATTGGCTATTGCTAAATGGGCAGTGGAA
TATATGGAAGCTAATTTAAGTTCTTTTAGACTAAGTGACGACTAATGATG
CGAAAGAAATGTTAACTTATAACATACATCATCCTACTGTGACTAATTAC
TGAAACTAGAATAGGCCTCTACTTTTCAGCGGTTTTAGCATTTAGCAATG
GGGAGGTTGGTTAAAATCTGTTTACCAACCGTCATAGCCATTTAGCTCTT
CTTCTCCATTCAAAACGTGAAACACTTGCATCTGGACGACTATTGCTAAA
TGGACAGGGAACATACAGGAGCTAATTTAAGTTTTTTTTGGGTCTAGTGA
TGACTAATGACATGGAAGAAATGTTAACTTATAACATACATCATGCCACT
GCGGACTAATTACTGAAACTAGAATAGGCCTCTACTTTTCAGCATTTTTG
GCAATTAGCAATGGGGAAAGTCAGTTAAAATCTGTGTACCAACTGTCATA
GCCATTTAGTTCTTCTTCTCCTCCATTCATAACGTGAAACACTTTCATCA
GGACACAATGTCAAATAAATACTATGAAATGCTTAGGTCTTGCATCAAGA
ATTGAAAATTTAGCTGTAGACTTTTGCAGCGAGTTACTCTGTGTTTTGAC
CCGGAGCTTGAAGTGAAATGTGATTCCTGTAGTGTCAGGCTTGAATTGAT
ACAATATATGTGGATTACATTAGCCCTTTCCATCACTTCGGACTGTTGGT
TGCGTTGGATAGTGCATGAAGCTTGACATCAATAGCATTTTTTTTTTCAC
AAATATCCATGATACAGCTCATGCAAAAATCTACGGTACCACTCGCGCGT
CGCAGAGTTCACCAATATCCATAGCCTCCTGCCTGTCCACACGCTGCAGT
GAGCACCCAGCACAGATCCTGCGTATATCAAGAAGATTAGCCTGCAAAAA
ATCGGAAAACTTTTTTTCATTGAAAACTAAATCATTACGGCCGGGCCATG
ACCCAACATACAACACACGCTGAAACGAGGATTTGACTATTTGAGAATGC
AACAATTTACGCAAACGTGCAAACCACTTAACACACATATTAGAAATCTA
GTAGGTGGTGAAAGGCTCAAGCCCCCCAAAAAATAACCCGTCGCACTAAG
TGAGGAAAAGGAATTTATAAAAAGATGCGAAATCGTTTCTTCGTCGCCAC
AGAAGCAACTCATTTTGCTCCCCTTCTACTTATATTTAGCCAAAATATCC
TTTGTTAAGATAATCCCCTTGCAAACATATTATACAAAGAAATTTGTAGA
GTGATATTTAGTTTGCAAATGATATGTTTGCGGAACTGACAACCCAGATC
TACCATGGACGCATAAAATTGACTGTACCAAGAATTGGCTGGAGGTATGT
AAACTCCAGCAGAAGTGCAGAACGAATCTACATAATGAGTTAATTGAATA
TGGTCTACCCTGTACCGTAAACTCTCCCAAGCCTAGAGCTTAGGTCCAGT
TAGGGCATGGCATAGTTCAATATTTAGGGGCACCGAGCCCATCACATCTG
CAACCATGGCATGTCGATTCCTGATGATGTGGTACATGGTAGGATTTTAA
TCACTGAGTGGCATGGTTCCAAGCCAAGTATCTTCCCAGAAGTGAGTTTC
TCTCCCAGGCTAAAAAATACCTACCATTATCCCTTTTGGTTTGTTTAAAG
GTCCCTCTGTTTAGCACTCATCATTTGTTAACCCTTTACGATGCCTTTAA
TATTTCCCAATAACCTTAAATTGCTTTGTTTATAGGAAGTTGCCGTCAAG
AAGTTTTTGCAACAAGACATTTCAAGCGATGCTCTGGACGAATTTAGAGC
TGAGGTATATCGATTTCATGTATTCAGTTGGCATAAATGATTGAAGTTCA
ATGCTGCCGGCTTTGTTGCTTGTGTTTATATGAGTATGTGCTTATGCCTG
TTGTACTCGCATGTACACTTGCTGCAGTCATGTGCACTTGTGTGTGTGCA
TTTTGTAAACTGAACATTCAAGTTTGTATGAGTAATCATATTTTTATTCC
ATAGTTGTAAACCGTAATACATTCCATTCCATTAGAAAGAATGTCTAACA
GTAATGGTAGATTTAAAGCAGGATATTGCTAAAGGTTTAGAAATTACGTC
AGCAGCTGATTATGATCTAAGAACTTTGCTTCCATTATGTGTAACAATGT
TTTTTTAAAGTATGTTCTTATTCATTTATCTTGATAATTGCTTCATGTCT
AGGTGCGAATAATGTTGCGGTTGCGTCACCCGAATGTCGTTCTCTTCATG
GGCGCTATCACTCGGGTGCCTAATCTTTCCATTGTCACCGAGTTTCTTCC
AAGGTAGGATTTCTTGATTTGAATTGGTTTTGGGGATTTGCATTTACTAT
GTAACACATACCAATATCACACAAGATCATCAAGCCACTTGACCATTTGA
TGCAAAATTTCATTTTTTTTGGAAAGGGGCATATATTAATATCAGAAGAT
ACCAATTACACCCAGCCTCTGCAACAACGCATTGCCCTAGTGGCCATACG
GATGCACACAGCCAAAAAAAGAAAGAAGGAATACAAAAAAAGAAAAATCC
TGCTACAGTGACCCATTCGTTGAAACATCGGTACTACCACCACCAAGACA
ACACCAGAAGTCCAGCTTCTCCGAAAGCGACGCCTCCAAGAAGGGAACAG
TGCACAAACACCGTCATCGCCCGATCATAGATCTTAGGTTTTCACCCTAA
AGAAAGTCCACGCTTTCAAAACAATACCTTCAACAAGGCCATTGCCAGGC
ACAACCAATTAAGGCCAGACCCTGCACCCTGAAAGGTAGGACTGTGAACC
TCTCCTGTGTAGTCGCCCCCACTTGCATGCCACTGCACTAAGTCACGAGT
CACCAAGCCAATTCATCATCTCCACCTAGACTCGAACCACCATTGTCAGT
CCTCAGATCTCGGTCTCCATGACATTCTTCCTCAGCACCATGGAACGAGA
ACATGCCCCATGATATTAACAGCCAAGAGAGCTTCGAAGCGCTCCCTCTG
AACCCAAACAAACGGTCAGAGTAAAACATGGGTGCGCACGACTGAATCCC
TCCAATCCGGCAATCTCCAGGCATTATTCGCCCATGGGAGTTCGCCGGCG
GAGCTTCCGGAACACGCCACTTCCACCAGATCGATGGGGAAAAGCTCCGG
CAGACCATCATCTTGGCGATATAAGGAATCCTAGGACCGCCGCCATTATT
CGCGAGACTAGCAGGCCCCACTCCGCCAGTCACCTCCATGCCGGAGTGAC
AACAAGAGAGGAAAGAGGCAGTCCAAGCGCAAGGCTGCAAGTAACGGCGA
TCCGAGGAACCACCAGATCCCTCCGCCCTGGCCATGGCTGGACCCATCTG
ACCAGATCGGCCTCGCAGCCCAGATCTTGGCCCGACGACCCAGCTCGCCG
CCATGCTTGCCGAAGATGTGCTGAGGGCGCACCGCCACCTCCTCAGTGCC
GCCCCGCCGGAGGGCTTCAGGCCCCGGCCCGAACAGCCGCGCTGCCCTGT
GCTTCCGCCGGCGTTCCTCCAACTCCTGAGGAAAACTAGCAGCAGCACCA
CGCCATCCCTGCCGCCGTCTTCGACGCGGAGGGGGCCGCTACCGCCGCCG
GGGAGGGCAGCGGGGGCGGGGGATGGAAAGCGCCGCCTAGATTTTGGCAG
CGGGGGCGCCGCCAGAGACGCTCGGGAGGGAGTGCCTCGAGCGGTTTCGT
ACGTAACGTAGTTTTCTCTTTTCCCATGCAAAATTTCATGTGTCAACAAT
ATGCGCTTTTCCTGACAACTCTCATTTTGAACTAGTTTACTTAAATGTCT
ATGATCCATGTTACTCATGAATATCCTAGAAGTTTGCATGGTTTTCTGTT
CAACTGGAAATGTTAGAGCAATTTGGAACAAAGGAGTTGCTGTAACTATT
TGTTATAAGTATCTGGATTCTCAAATACTCTGTTAGGCAATTTTTCTCTG
GAGAATGACTCTGTCTTCTATTTTTTTATCATGTTGCTTTGATTTCATCT
TCTCCATTATGTAAGGGTTTTGATAGCCTGGCTTGCTTTGTAAGTCGAGC
TCAATCAAATCTCAGTTGACCATAGACAAATATCACACGCATTCCAGAAT
CCTCGTCCACAACCCCCTTTAGTACCATGCATTAGGTTGGTGACACGTGA
TTCACTAAGGGTACAGTTGTGTGTGCGGAAACAAATATAAAAATACGATT
CAGATACTTGATATAAATATTATCAACACTTGTAACAGCTCGTTTCCCCT
TTCATATGAACTATGACCTCTTCAATTCCACAGCTTCCTTTAAAAGAGTC
TACGTTATTTACTGATTGCTAGTTGTGTTATTGGTATTTCAGAGGTAGCT
TGTTCCGGTTGATTCACCGACCTAACAACCAGTTGGATGAAAAGAGGCGC
TTAAGAATGGCACTTGATGTGGTAAGACCAATGCATAATTTGATATACTT
GTCTCTGTATTTTGCTGACTAATGCAGACAAGTACAACAAATATATACCC
TCAAAAAAAAAAGTACAACAAATATATACTTTTACTTAGCTTGCTTTGGA
TGCTCCCTAGGCGCGTGGTATGAATTATCTGCATAACTGCACACCAGTTA
TAGTCCATCGAGACCTGAAATCCCCAAATCTACTGGTTGACAAGAATTGG
GTTGTGAAGGTAACACACAAGTACCGCTATCGCAAATGTCATTCTGTGTT
TTGTTTCCACTGCAAGCTATATAATCTTTTGCAATTAGGTTTGTGATTTT
GGTCTATCGAGAATGAAGAACAATACCTTCTTGTCATCAAGATCAACAGC
TGGAACAGTAAGCTTGCATGATCCCGCAATTTGACTCTGTAATTTTTGCA
TGAGCAGTGCTTTAAGCTTTAATGGAGTATTGGAAGGTTTAACTGTAGCT
ATCCTAGTATGGAAGGAAGATCGAACGCTGATAGTACAGTGCTTGGATGA
ATGGTGGAGCTTCAAATTATATCTCAGACTTGCACTTAACTGGAACATCT
TAACCCTCCACTGCCTTCAGCTTATATCTCCAATATTTCAGTTCAGTTTA
TAGTCCAGAAATAACTAGCTGTGCAGTCACGTAGTTTACATTTTGTAGGG
GAAGTCACATAGTTTGCTAATGTAATAAAGCTGCCTAACAGGCTCAATTT
TCTTAGAACTTCGTTGCCCTTCTATCAAATAGTTCATATACCATGGAGAC
AAAAGTTGATTTATATTATATGTGGGCATTTTTATCTGAATCATGGTGGT
TCAGGTGCTGCACCAAAGCTACCACTAAATGTATGTGTTGATGTGCAGGC
AGAGTGGATGGCACCTGAAGTACTACGCAATGAACCATCAGATGAGAAGT
TAGTCTACTGCCTAAGACCCAGTTCAGGTGTACTCATATCTCGCATAATT
TTGTGCTTGCTAAAATATTTGTGGATATTGGCAGATGCGATGTTTTCAGT
TATGGTGTCATACTGTGGGAACTATGTACATTACAACAGCCCTGGGAAGG
TATGAACGCCATGCAAGTTGTTGGAGCAGTTGGGTTCCAGAGCCGACGCC
TTGATATTCCAGATAACGTTGAGCCCGCCGTTGGAGAGATCATAACAAGA
TGCTGGCAGACGTTAGTATGCCTAATTTGCTCGGTTTCAGTTTCAAAATC
ATTTCATACCATGTCTCCATAATCATCATCGAAACTCTTCTTCGGTGAAT
GCACATTTCCCAGTAATCTCAATGCTGCTGCCTTCTGTATTTACTGTAGA
GACCCAAGGGCCCGACCATCATTTGCAGAGATCATGGCTGCATTAAAACC
ATTACTGAAGACCATGCCTGCCAACCAAGCACCAAGGCAGAGAGTACAGC
AAACAGATGGTTAGGAAAGAAAAACGAAGATTAGCAGCTGCTCAGCGTCC
GTAATACAGGATTGTTTTTTGTACAGTTACACCAAATGTGTGTGCAGAGT
AAAAAAAACGTGATGTTGGTCTTTGTTTCCCCTGTATAGATGTAAGTTCC
AACTTCCAAGAGTGGATGAGCCATACGAAGAACAAGGAACTGACATGGCG
GGCGGAACAGGGTCTTTGATCATACCGTCTCTGTGTTGTGTTGTCCACCA
AATGGTGGGTATT

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.