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GrainGenes Sequence Report: AA000116

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Sequence
AA000116
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA000116
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
CAACATTAGGATCGTCCAGCCTCCGCCTAGCCCTCGACCGAGATGGAAAC
CCCAGAAGCCCTCGCCACAGCCACGGAAGCGCCGTCGGCATCCCAGCCGG
GCGCCACCCCCACGTCTTCCTCCTCCTCCACGCCTCCTGCTCCGTCTCCG
GCGCCGGTGGCGAGGAAGAGGACTCCAGGGAGATGGAAGAGGATCCCGCG
CGTCCTGACACCTGACATGCAGGCCAGGATGCTGCTGGGGGGCCTGGATT
TCGAGGACAGGAGTCGGCGGCTCCTGAAGAACGCCGAGGAGCTGGAGGCC
ATCGACCCCAACGGCTGCGACTCGGAGGAAGCCAAGATTGCCTTCATTGC
CTTCCAAGCCGAAGAAGCCGCCCGGTACCGCAGAATCGCCAGAATCAGGC
CGCAGGATTTGGTCTTACGCCCCATCGTGCTCAGCGACACCAAGTAATTA
ACGACGACACTACTACGGTTCCTTTCATCAGTTTGTTCGTCGCATAATAT
TGTGCCTTGTCAATCATACAGACCATGCTAATCAGCTTACTTTACCTACA
GGGAAGAGCTCCTGACTGCTGAGGAGATGGAAGCACGCTTCGTTGAACGC
AAGGGCTGTCATGTGGCACAACTAAAACACTTTGCTCAACTTTCGTTGGA
GCATTACAATGCCAGAAAGGCCGAGGTATGCATCTAAAACTTATACCCAT
ATAATAATTATATTATTACCTGTTAGCCCCTAGCCCTATTCCAGCTACAC
ACGCTTGGACTTCTTGGCCTCCAAGGTCAATGGTTCACACTTAGAGAGTA
GTACGTGAGCTGGTTTGTTCAGCTCACTAGTAGTATAAATAAGGCTTCAT
TGTATCAGCTCACAACACCAAGTAGTAGAGGAATAAACAGAAAATTTCCC
TAGCTTCTTGTGTCCTCTCGTGAGAGTTTCCATCCTCTCTAGAGTGCGTG
TGTTCTTGCCCATTCTCTTTGAGTTTGAGTTGTGTCCAAGTGATCAAGCG
TGTGTAGCTGGAATAGGGCTAGGGGCTAACAATTGGTATCAGAGCCAAGT
TAGTAGCCATGTCGCAAGGCAATGGGAGAGGCAATAACGGCACACCACCG
CCACGCCAATCCGCTACACCTTCGCCCGGGCAGCGACGACGATCGCCGAG
CCGTGGGCGCAGCAGGGTGCGGCGCAATGGCGGTGAGATTGTCGTGCAAC
AAGTGGTGCACGAGACCGGAGGCGGCAGCGGCACCAACCTCTCCTTCCCG
ATGTTGACGCGCTCCAACTACACCAACTGGGCAATGGTGATGGAGGTGAA
CCTCCAGGCGGCGTCGCTCTGGGAAGCGATCGAGGACGAGACCCTACCTC
GTAGGGAGGACAAGCAGGCGTTGGCGGCGCTGCTCCGCTCTACCCCATCG
GAGATGCACTGCATGCTCGTGGGGAAGGGGAGCGCCAAGGCGTCCTGGGA
GGCAATCCGCCTCCAGTACCAGGGGAACGATCGTGTGCGCGACTCGCGTG
TGCGCCGGCTTCGAACTGAGTTCGAAACCGTCACGTTCAAGGCCAACGAG
CGGATCGACGAGTTCGCGATGCGCATCTCCAACATCGCGTCCGCTCTGTG
CTCTCTCGGCGACTCGGTCGACGAAGAGAAGGTTGTCAAAAAATATCTCT
CTGTTGTCCCTACGCGCTTCGTTCAAATTGCCTTCTCCATCGAGACACTC
CTCGACCCAGCAACACTCACTGTCGAGGAGGTTGTTGGCCATCTCCGAGC
CGTTGAGGAACGACTGGACGATGATCAAGGAGGCAGCTCCAGCGGCCAGC
TCCTACTCACTGAGGAACAGTGGGAGGCGCGAAAGAGACAGCCACGGGGA
GGCGGAACAAGCGGCAAAGGGGGTGGCCCCAACAATGGCCGTCTTGGAAA
TGGGCGAAAGGACGGTCAGCCTCAGCAGCAGACTGCGCCGACGCAAGGTT
CCGGCAACAACATCGGCAGGAATAACTGTCGGTACTGCGGGAAAAAGGGC
CATTGGGCCCGTGAATGCCGCAAGAAGCAGCGGAATGAGGCGGCGGCGAC
GGCACCGTCGGCCGCTGCCAATCTTGTCTAGGCCGAGGAAGATGAAGGCC
CTGGACTGATGATGGCGTGCGTCGAGGAGGTGCTCGAATGCCCTGAGAAC
ACCATGACACGCACTAGTGGTCAAGTGTTCCTCAACGAGGAAAGGGCCAT
TGTCACCCCTGCCCACGATGACGACCAAGGCGGCGAAGTATGGTACCTCG
ACACTGGCGCGACGAACCACATGACAGGCTCCATTGATGCCTTTGCTGAG
CTGGACCGTTCGGTCACCGGCAAGGTGCGTTTCGCGGACAGCTTAGTGGT
GGATATCCATGGACGCGGCACCGTCGTGTTTGCCATCGACGGGGGAGATC
ACCGTGCTTTCACCGAGGTCTTCTTCATCCCGGTGCTCAAGAGCAGCGTC
GTGAGCCTCGGCCAGCTCGACGAGAGTTGGTATGACATCCACATACGTCG
TGGAATCCTCAGCGTGCGAGACCAGCGAAATCGCTTGCTGATGAAGGTAC
AACGGTCGCCCAATCGCTTGTACAAACTTCGGTTCACACCCGTACGTCCA
GTGTGCCTCGCCATGGGTCACGTGTCCGATGCCTGGCGCTGGCATGCGCG
GCTTGGGCACCTACACTTTGATGGCCTGCAGAAGATGGCTCGTGGAGGCT
TGGTGCGTGGTCTTCCACACATCGAGCATGCAGACGAGCTGTGCGAGGCG
TGCCTTGCCGGGAAGCAGCGGCGCCTGCCGTTCCCGCAGAAGGCGCACTA
CAGGGCCCAGAAGCCGCTTGAGCTCGTACACGGGTACTTGTGCGGCCCGA
TCACGCCGCCGACGCCAGGAGGCCGACGTTACATCTTGCTGTTGATCAAC
GATCGTAGCAGGTACATGTGGGTGGAGCTTCTGGCTTCCAAAGACAAGGC
TGCACGCGCCATTGTCAAGTTCCAGGCGGCAGCTGAGGTGGAGTGCGGGC
ACAGGCTGCGTGTGCTGCGCACCGATCGTGGCGGCGAGTTCATGTCGGCC
ACCTTCTACGAGCACTGCGCCGAGAGCGGCGTGAAAAGTCACCTCACCGC
GCCATACACGCCGCAACAGAACGGCATCGTCGAGCGGCGGAACCAGACAG
TGTTGGGCATGGCACGCAGCATGCTCAAGGCTAAACGGGTGCCTAACCTA
TTTTGGGGAGAGGCGGTACTCACGGCAATGTTCATCCTCAACCGGTGCTT
CACGAGGAGCGTCGATGGCATGACGCCCTATGAAGCATGGCACGGCAAGA
AGCCGGACGTGCGCTTCCTCCGTGTCTTTGGCTGTGTTGGACACGTCAAG
GTGGCGTGCCCGCACCTGCAGAAACTTGATGACAGGAGCACCCCCATGGT
CTTCATCGGCTAAGAGACAGGTTCTAAGGCGTACAGGATTTATGATCCTG
TCTCCAAGCGCCTACATGTGTCACGCGACGTCATCTTCGACGAAGAGGCA
CGGTGGAACTGGGAGGCGCCCGGTGAGGCCCCGGCAAGCAGCTCCTTCAC
AGTTGAGTACCTCGTCTACGTCACGCATGCGGCCACATCGACCACGACTC
GTTCCCGGGACACAACTCCCGCAAGCAGTCGTGTCGCCGTCACGCCTTCA
GGCACACCGTCTCCAGCACGGCAAAAGCTCCCGACAATGACGCCTAGCAA
GGATGTTGAGATTCCCCCATCTGGTTCCACTTAGGTGCGGTTCGTGACGC
CCCCGTCAGCGCAATCGGCTCTCTTCGATGCCCAAGACAGCGCCACTGCA
CCACACCGGTTCCGGCTCATCGATGACCTGCTTGGAGCTCCTGCCGGTAC
ACCGCAACTAGCGGAGCAGTTCTTCGACGACGAGGTGTTGCATCTCGTGG
CTGGAGAAGAACCGACATCGTTTGGTGAGGCAGAATGCGAGGACTATTGG
CGCCGCGCAATGTTAGACGAGCTTCAGTCCATCGACGACAACAACACATG
GACTCTCACCTCTCTACCTCCAGGCCACCGTGCGATCGGCCTCAAATGGG
TGTTTAAGGTGAAGAAAAATGAGCATGGACACATCGTCAAGCACAAGGCC
TGGCTTGTCGCAAAGGGCTATGTGCAGCGTCAAGGTGTGGACTTCGAGGA
GGTATTCGCGCCAGTGGCAAGGCTCGAGTCTGTGCGGCTCATCCTTGCTC
TGGCGGCACACCATGGATGGGAGGTTCATCACATGGATGTTAAATCTGCA
TTCCTAAATGGAGATCTCGAGGAGGAGGTCTATGTGTCCCAGCCACCAGG
GTTCATCGCTAATGGACACGAACACAGCGTCTACAAGCTCCATAAGGCCC
TGTATGGGTTACGACAAGCACCAAGGGCGTGGAACGCCAAACTGGATGCA
AGTCTAGCTTCGCTCGGCTTCACGCGCAGTGTCACGGAACACGGCGTGTA
CGCACGAGGAACTGGGAACGCACTGTTGATTGTCGGGGTCTATGTCGACG
ACCTGGTGATCACCGGTGCTGAGCAGCGAGAAGTGCACCGTTTCAAGGAG
GAGATTAAACGGTTGTTCTCCATGAGTGACCTCGGCTTACTCCGATACTA
CCTCGGCCTAGAGGTGAAGCAAGAGTGTGGGCGCACCACGATCACACAGG
CTGCGTATCGCGAGCAAACTGCTCGACAAGGCGCGCATGGCGGGCTGCAA
CGCCGTGCACACGCCCATGGAAGCATGATGTCAGCTGAGCAAGGATAGCA
AGGAGACGCTGGTGGACGCAACGTTCTACCGCAGCGTCATCGGCAGCCTC
AGGTACCTGGTTCATACCCGCCCGGACATTGCGTTCGCCGTGGGCTTCCT
AAGCAGGTTCATGGAGGCGTCGGCGGGCGATCACCTTGCGGCGGTGAAGC
ATCTTCTTCGATACATCGCCGGTACACTAAACCACGGGTGTGTGTACCGC
CGCGGTGACAGCGAGACACTGATCGATTTCAGCGACTCTGATCACGCCGG
CGACATGGACTCCAGAAAGAGCACATCTGGCGTGTTGTTCTTCCTCGGTG
TCAAAAATAAGCTGGCAATCTCAGAAGCAGAAGGTTGTCACCACTTCTTC
GTGCGAGGCGGAGTACATAGCGGCAGCAACGGCGGCGTGCCAAGGGATTT
GGCTTGCTCGTCTCTTCGGCGAGCTACTGAACCAAGAAGCTGTGCCGGTC
AAATTGTTCATCGACAACAAATCTGCTATCTCGTTGTGCAAGAACCCTGT
TCTCCACGATCGCAACAAGCATATTGATCTGCGTTACCACTTCATCCGCG
ATTGCGTGGAAAACGGCTCCATTGTCGTGGAGTTCATCGGGACCAGTGAG
CAGAAGGCAGACATCCTGACCAAGGCTCTCGGTCGCACTCAGTTCCAGAG
TCTGCGAGAGAGAATCGGGATCGTCAAAATCTAGATCAACTAAATTAGGG
GGGAGAATTGTTGCCTTTAATTTACATTGCTAATTAGTGTTGACCTAAGC
ACATGCGGTGCATGCACATGCACCCTGAGACTCCATGTGCATGGAGTGTG
AACTCTGAGTATACCACTAGTCCACTAGCAAATATTCTACAATGTCAGGA
TAGCATTCAGAATGTCAGGTGATAAGCTACATGTCAGGATAACCTGCAGG
ACTGCAGTTAGTTGCAGGTCAATTTGCTAGGGCGGCTTGGACTTCTTGGC
CTCCAAGGTCAATGGTTCACACTTAGAGAGTAGTACGTGAGCTGGTTTGT
TCAGCTCACTAGTAGTATAAATAAGGCTTCATTGTATCAGCTCACAACAC
CAAGTAGTAGAGGAATAAACAGAAAACTTCCCCAGCTTCTTGTGTCCTCT
CGTGAGAGTTTCCATCCTCTCTAGAGTGCGTGTGTTCTTGCCCATTCTCT
TTGAGTTTGAGTTGTGTCCAAGTGATCAAGCGTAGGGGGCTAACATTACC
AAGTGATCAAGCGTAGGGGGCTAACATTACCAAGTGAGCCTTGGTCTCAG
TTTAGTGTGTGTGTGTGTTGAGAGTGTGTAGCTACTGTAGGGGGCTAACA
TTACCATGGTTTTAGCCTAGGCGTCCAAAGCGGTCGATTTTCCAAGGCGG
AGGGGGGCCTTTAAAACTATGATTATTACTTGGTTCACTAACAAGATCTT
GTTTCTCAAATATTGCAGCACAACAAGTTTGAATTAGCTCAAGCCCTGAC
TTCCAACTGCTTCACCGAGGATTGTGGAACGACCTATGCACATGTGAATT
TCACGGCTGCTCCCCAGAGCAATCAGAATGACCAACCAATGAAGAGGCTC
TTCTTCGCCGAGCTTATGCTCGTTCCAGAACTCCGGTTATGTGAGGATGT
CGAGCCTATGCGCGTGCTGCAAGTCTCCACTATTGACGAGGCTCCTTGTT
TTGGTATGTTGTTTGAATCTCTTGCTATGTATTTCGCTGTTGTTAACGCG
TTGCCCGATAAGCTAATAAATATAGTTATGTATTGCAACCATTAGACCTG
TCGGTAGAGGTGTATACTGTTTAGCAACCAACAATATCCTTCCTGGTGAC
TATGAATGAGCACGATATTGCAGAATTGCAGATATAACGTATAAGTGTGT
TAAACATGTAATTTCAGGGTATGGTGTTTGCATGGAATTGCAGAATATTG
TAAGGTGAGAATGGATGCACATACAAAATGTCTAAGGCGAGAATGAATGC
AAAAGAAAAATATCGGCAGGAGTACCATGTAACAAATGGTAGATAGCTAT
GTATTTTTCTTGTAGTGCTATATATGCAATTTGCTAGTCTAAGTCTGCTG
CATGTTTGTAGTGATATATGACGACCACTTTTTTCATACAGAGATCTTAT
GTACCATCCATAGTGGAAGCATATACTTGTGTGTTTGTACTTGAACTTAG
TACTTTGTACGTATTATATTTTGAAATATCATGTGTTCTTACTTGTGTTG
CTCTGCAGGTGGATGCCACGAGATACGTCGGAGGATTGATCACAAGATGA
GGGGGGTTATGGATTACGAGCGCTGCCATGCATGTCACAACATTCTCAAG
CATCCAAAAGGAGATAGTTTCGTTGGAGGACATAATAGTACCAGGAGGCC
TTACTACTCTGCAACTTAAATCTGAATTGGTGCCAAATTGAATATTATCG
GCATGCGTGATGTGATGAGGTAAGTTATTGTCATGTACTGTGTTGTAAAC
ATGCTTTCAGTTTAGAGGGTCATGAGTAGTTTGAAACCAAGTAGCTTCAA
ACCAGTGCTAGTTACCCTGGTGAACACCCTTGTTC

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.