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GrainGenes Sequence Report: AA020171

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Sequence
AA020171
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA020171
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
ATGGCGTGCGGTGGCCTTCTCCGCTCTGAGCTCCACGACAGCCTCCATGT
TGCATCATCATCGTCGACGGTGTCCCCGTCCTAGGGCTCATCGGAGGCGG
CGGCCTGGAGGATCCCTCACCACACCACACCAAGCTCGCCGACGGCGGCC
AGGAGCAGCCCGACCCGCGCCCAGGAGATTTTTCCAACAATGTTTATGGG
GTTTGGAAAATTGGTCACATGTTCAATTTTTTTTACAGCATCAAGAAGAG
AAATGACTCATATATTACCCAAGAAAGAAATGATAATAAAGGAACGAAAT
GATATAAAAGTAAATAATAAAAATAAAAATAAAAGGGAAAGTGAAGGCGA
AAAGTAAAAAGAAACAAGAAAGGAAAAGAAAAAACGTAGTAAGAAATAAA
AGCGTGCTTCACTAGGCCGGCCCATGTGGGCGAACCTGCGGGCGATCCCA
GACGCCAGTCACAGACCACACTCCACCTTCTGTCAAAAAAAAAAGACCAG
ACTCCACCTCACCCGTCATGCGAGACCCCCAAATCCCCAAGGGCTTATAA
CTCCTATGCGATGTCTTTACGCGGAATTGGAAGGAACACGACATCGTTGA
AAAGAATAGCTCGCATGCGACGGTTGTGAGGCAGCTAATATCCCAGGGCC
ACACGGGCCATAAAACGATCGTTAAGGACACATTTAACTTTGTTCCAATA
TTAGGGTTAAGCCAAACCGGTCGGTTGGGATAGCCAGTCAAGCCAGTCAA
ACCAACCGCTTCCGACCGAGAGCGCGCGTCACACTGACTGTTGCTTCCCC
GACAGCGGCGGCGGACCTCACCCATCGTTCTCGGCGGTGGCGGCACGGCA
ATTAATTTAGGCGGCGGCGCTTTCGTTCGACGGAGAAGGTGGTGAGTGCC
ATTTGAAAGATAATTTCTCTCCCATTCTTCTCAATTCGAGATCTGAGTGT
GCCCATTGATGCTAGATTGTGGAGGCGAGTGTGTGCTGAACGGGACGAGG
GGGAATGAGATGGAGCATGGAGAGGGGACTTCTAATCGGTATATCACGTA
TCTCTGCACTTAATTTCTCTAAGATTGAGCTCTTTGTTTGCTTTCACCAG
CTCAAAGTGCCCGCGAAAAACAGGGGAGACAATGTTGCGCGCCAAACCTT
CGAATTTCGCATCAATTTCTTTCCCTCTAGGGCTGTTTTAGTTGATGGCA
GCACGCAGCTCATTGAGAGAGACAAAGTTGTTAAATGGGAGGTGGAACTA
GAACATATTGATCCCCAAGAGCTAATAAACATGGGAGAGGAGGCGGTGAG
GAAAATGGTGGAAAAAATTGGGGATAGTGTGGTTTGGGGGCCAGAGCAAG
AAGTTTATTTGTTACGATTTGATGATTGCAAATGTGACTATGTTAGGGTT
GAGATAGGGGAACATATAGTTGATAAAATCGATGAGCGAAACGGTTAGAC
AAGCAAAACTGTTCTGTTTTTAGCAGAGCTCATTGATCTGAAACCTGATT
CGAGGGTTGGATATGTGGCCTCGAAGCTGGCTGCTCAGATGGTCGAGGAT
GATTGGGCTGCACAAAGGCAAGTAATGCCTATACTTACTGAGTTGGAAGT
GTTAACAGTGGATAATGATGCTAATGCACAAGAGGATGCTGCAGATGCTA
ATGCACAAAGGATTGTAACTGTTGACTGGAATTCAGTTGAGATACATGAC
CGGACTGATTTGGTCATTGCACCAATAGATGCCATTGAAATGGCAAAGCT
TTTTGGCATTCCTATAGATGACAGAGACAAGGATAAGAAGAGGGATGAAG
CTGCAAATGATGGTGACAACCATTTAAGAGATAAAGAGGCAGATATAGAT
CTAGAGTTGTTGGAAATGTTGCCGTTCATATAGATGATGCACATGATGAT
GAGATAGTAACAGTTTATGACAAAGCGGACCCAGTTATTGAAGTTGGGAG
ATTGTTTCCAAGCATGGATTAATTCAGGATGTCTTTCAGGACATATGCAG
TCAAACGTGAGTTTGCTACCAAGACTATGTGGACTGATAAAAAGAAATTC
AATGCAAAATGCATAGGTTATGATGGTGGTGCCAAGCCTTGCAAGTGGTA
TATATATCTGCTAGACGCCAACCTAATGGAAGGACAATAAGAATGAATCA
AATTCCAAAACCTCATACTTGCATTACAAGTTCTCACACAGTTACAAAGA
TGACATCACAATTATGGGTTGCAGAAAAGATCAAGCCCATTTTAGCCACA
ACACCAAACATCACTGCAAAGAGACTGAAAATAGACTTGGAAAAGTAGTA
CCCCATTAAGCTGAATTATACTACAGTGTGGAAGGCAAAGCAAATGGCAA
TGAAAGAGCTATATGGTGATTTGGTAAATACCTTTCGAATGCTTTATAAC
TTCAAAGCAGAAGTAGAGAAGAGGTCACCTGGTAGTGTTGTGGAGATAGA
TACTGAGGTAACAGTTGATGGGAAAGTCTTCTTATCTAAATTCTTTATGG
CTTTAAAGCCTTGCATCGATGGCTTCAAAGCAGGGTGCCGTCCATATTTG
AGTATAGACTCATCTTTCTTGACTGGAAAGTGGAATGGTCAACTAGCAGC
ATGCAATGCTTTAGATGGACACAATTGGATGTTCCCTGTAGCTATTGGCA
TGTTTCAGTCTGAGATAGATGCATCATGGACATGGTTCATGATGCAGTTG
AAAAGATGCATATGGACAGTCTCTCCATTGGCAGTGCACACAGATGCATG
TAAAGGTTTAGAAAATGCAGTGATGATTGTTTTCCCTCATGCTGCGCAGG
GGGAGTGCTTCGGCCATATGTGGATGAATTTGATCAAAAAATTCAGAGGA
GATGATTTTGGACGCATGTGGCCAGCAGCAAGATCTTACACCAGACAAAC
ACATTCATATCACCTTGATAAGATTAAGGCGGCATGCTCTGAGGAGGATA
GGGTCATGTTTTGTACATGGTTGGAAACCTACCATTTTCTTTTATGGTAC
AGGTCTGGTTTGAACACTATCATCAAATGTGATCATATCAACAATAATTT
GGTAGAAAGTGTCAACAACAAAGTGGAGGAGTTAAAAGACTTGCCTGTCC
ATGACATGGTTGACCAAATCAGGATCATGATCATGAGGTTGTGGGAATTG
AGAAGAAGGCTTGGTGATGTTCTTCAAGGAGATAAGCTTCCTGATGTTGT
GCAGCAGGTGGTCAACAGGAGCAGAAATCTTGCACATTTGCATGTTGAGA
AATCCTCGTTGTGGGGTGCTGAAGTCAGAGATACAAAGACTGGCAGGAGG
CATGTTGTTGACACTCAATTGCATGAATGCACATGCCTTGAGTGGCAACA
CACTGGGAAGCCTTGTGAGCATGCCATACTTTTCTTGGCCTCCAAACACA
GGCTAAATATGCACCCATATTTGCATGAGTATTATTCTGTAGAAAAATTC
AAGGCTGCATATGGAACACCAAATCCAGCACTTACAGATCAGTCTCAGTG
GCCTGAAGTGGACATTCAGTTCTCCTTGTGTCCTCCTTTGATGAAAATAA
AGGTTGGCTGGCCCAAGCAGAGTAGATTCAAGGCTTGGTTTGAGAAATGT
GGGAGCAACAAGAAGGGAAATAAAGATGAAAAGAAATATGCCAAGCCAAA
AAGGGCCCAAAAAAGTAACAAGAATAGATGCAAACTTTCTGAAAAACTTG
GACACCGAGCTGGCTCTACCAAGTGCAGATACACTGCTGAAAAGCCAAAG
TATGTTCATCCAAAATCTATCCCATTTCTTGTTGATGATTTTTCTCCCCC
AGCTAACTTGCTTGTTTTCAGGAGGAGGCGTGGAGAAAAAGGCCCACCTC
TTGTTGTTGACGAATGTTGGCCAGTGAAAAGGGCAAGAATCAATGGCCAA
AGAAAGAAGAGAAGTAACCAGATCAGGTTTGGTGCTGCTGAGGTGCAATC
TGAACTTGTTTTGGAGGATGATGTGCAAACTGTTGAGGCTTTAGGGCACA
CCGTTTCTGATTTGGAAGCTCTGGTGCAAAATGAGGGGCAAAATGAGCAT
GTTGTTGAGGCTCTAGTGCAAAATGAGCCTGTTGTTGAGGCTCTAGTGCA
AAATGAGCCTGTTGTTGAGGCTCTGGTACAAAATGAGCCTGTTGTTGAGG
CTCTGGTACAAAATGAGCCTATTGTTGAGGCTCTGGTGCAAACTGACCAT
GTTGATGAGGCTCTGATGCCAGATTGTGTTGTTGAGGAGGTGCAGGAGGT
GAAGGAGACTCTTGGACGTGCTGTGGGGAGGCCAGATGGTAATGGTAAGA
AAAATAAGAGCATAAACCTGTTGTGTGGTGTGAAACTTGTGAAGGAGAAG
AAAACGAGGGGTAAGAAGATCCAAAAGAAATAGACTTTGAATTTGGCACT
TGTTGTTGTAAACATTTGTTATTGTAATAATTTGGCAGTTGTTGTTGTAA
ACATTTGTTATTATAATAATTTGTCACTTATTGATAATTTGGACAAAATT
CAAATATGATGGTAAATTTGAATTTCAACAAATGTAGCTATGTGTACTTC
TCTATGTTTGTATGAACTTCCAACGTTTTTCTCATATGTACAGTACAACT
TATCCTCACCATGATCCCTTTTGTGAAGTATAACCCACCCTCACCCAAAA
TGTGGTAGAAATGGGCTCCAAAGCTAGGGTAAACCACCCCATTTCTAAGC
GAGTTTTTCTGGACCATTTCTAAAACCAAGTTTGGTATTTTTCCTCACAA
CTATTTGTTTTGAATTAGTTATGCACATTTGAATGTTTGGTCAAACTTTT
TGAAAGGTTTTCATAAATATTCTTAGCTAGGGGCTGAGTCTCACAAAACT
AGCATTGGATCTCTGATGAAATAGCATGTTGTGAACCTAAAAATGATTTT
TACAAAAAATCATCAGCATAAAATCATGTACCTGTAGTTCATATCTTACC
CACTTCCAGCCGATTCGGCAGGATTTGTCTTTTTACCAGGGATGGAATAA
AAGGTTTGAGATAGTCAAGTTGGGAAATTGTACATGCTAGGTGGTCTAGT
ATTTTTTAAAAATAGGATGTTACCATTTTGAAACTTCAATTTGGTGGTTG
CTTCACAAATCCCCCCTCTTTCGGCACTCAGAAAATAGAAAATGGATTTT
CTGTGCGTAGAAAAGGAAAACTTTATACTACAACATTTTTAGTAATCCCA
TTATACACATGCATGCCCAATATGGGCACATTATCACAAACTATGCCTTG
ATTCTAGCCATATCATTGGTCATTTGACCCGAAAGCCAGAAAACCTCGGA
GAAGATAGGTCATTTTGTGAAGGGTTTTTTGAAATATGATCAATAGACCA
AGTTTGGTATTTTTTCTCACAACTATGTCACATAACATGACACCATGCGA
AGGTTTTGTATTTTTTTTGATTTTTTTTGAATTAGGTATGCACATTTGAA
TGTCTGGTCAAACTTGTGAAACCCCGTTGACTGCATCCTAAACCCAGCTA
ACCCTAAGGTCGAATGAGGAACGTAGATCTAACCCTAGCGCGACACTGTG
GCCGTCCGATCACGTCTTCTAGAAGGATTCCGCGGGTGGCTCTGGGCGAT
CCGTGGAAGGGCTTGTTCTGCAACCTGATTGGTTGGCGTCTCTTAGAAGG
ATTTCGCGGCTAGCTCTTGGCGATCCATGGAATGGATGATTCTGAAATCT
GATTGGCTTCATCGTTTTTTCATGAACATATAAGGTACAACGTGGCACAC
TCCATTGACCGTTGGACTGAGCGTGGCATGCGAGGGCGCTGGGAGTGGCG
GGCTGCATCATGCATGCAGCTGCCTCTAGTGTCACAGTCTAGCTATTTTG
CGTGCAACAGCGCTGCAGCGTATTTACTCCCTCTGTCACATTAAATAAGA
GGCAATGTACGTCTAACAACTTTTTTTAGTCAAACTTACTCCTCTCAGGT
TCATGCGCCATAGAAAAACTCAATATTTATAAATTTAACTATATATATAA
GGCTAGTCATAGTGGGAGTAACTTGAATAGTAACATAGTCCTACATGTAT
TGTCAACTAAGCATTTAGATGACATGGCATGCAATTAAATGATGAGAGAG
AGGTTTGTGGTACTAACTAGCAATGTTAACATAACATCACGAATTTCAAT
ACAAAATGAGTCTACATTGTAACAAATGAGACTTTGCATAATACCACATC
TATGTTATTTTGCACTATGGAGTAGTAACTTAGACTAGTAACATATGCAT
GTTATTACTCTAAGTTACTCACACATACTCGTATGCATGTCACTATGACC
AGCCTAAAAAAATATCAAAATCTAAAATATGTAATAAATATAAGGTACAG
CGTGGCACACTCCATTGACCGTTGGACCGAGCGTAGCATGCGAGGGCGCT
GGGCGGGGCGGGCTGCACCATGCATGCATGCTATGCAGCTGCCTCTCACG
TCGCATTCTAGCTATTTTGCGTGCAACAGCGCTGCAACGTATTTACTCCC
TCCGTCGCATTAAATAAGTGTACGTCTAACAACTTTTTTCAGTCAAACTT
ACTCCCCTCCGGTTCATGCGTCATAGAAAAAGTCAATATTTATAAATCTA
AAATATCAACTTTGACTATGTATATAAGAAAAAATATCAAAATCTAAAAT
ATTATAAACTTAGTTTCATACTCCCTCTATTCCCTCCAATTGATTACTCC
CACCGATTTTTCTTGCATGTGTAAAAACGAACGAGTTTGTTGCATGCGGC
GTGTAAAAACGAACGAGTACCTTGGTCCTAGATTCCTTCATTTATTACCG
AGTAAATCAAGGCCAAATTATATTTTCTCTTTTATTTTTCACTGCCAATG
AACAACTACCTTGGACGTTTTTTCTCTCGTTCGCATTAATGCATGAATGC
ATGCAGGGGCGACGGTGCAGGGGTCACGTCGCATCCTAGCAATTTTATTG
CACTGACCGCATTGATCACGCACGCGGCTATGCCCGCTGCCTACACGCAA
CGCAGTGCACGCGACTGCGCCAACGCTGGATTCCCACGCCGCCCTTCACG
CTCCGCCCTCAATAAATAGGCAAAACGCCTTTGCCTCCTCATCTCATCTT
GCCCCTCATGTTCAACCTCGAGCCCGTCCCTTTGCCTCCTCCTAGCCCCA
AAACACTCCGGCGACCATGTCGACCTCCCCCCTCCGCTTCACTTCTGATT
CCGAAGTTAGCGACGAGGACAACCACCCGGACCACAAGCAGGTCTGGGAG
AAGGAGGCGCCCACGCGCCCCAAGCGTAGCAAAAACGGGGGGTGACGCAA
AGCCCCGCCCTGCCCCTGGGCGGAGGGCCACTTCGTCCACAACCCCCTCC
CCGGCGGCAACCTCCCCGATGATGGCCCCTCCGAAGAGTAGTAGAAGGCA
GCGGAGAAGGAGGAGGCGGAGCTGGCTACTTACGCCAAGTGGGAGAAGAA
GTAGGCCGCGCGCGCCTTGAAGAAAAGGCGCAAACGGGAGGACGAGGAAC
GACATGAGGCCAATCGCTGGGTCTTCCTGGAGGAGCAGCGGTGGTGGGAG
CAGCGGGAGAGGCTGGCGGCTTGGAATTCCGCGGCGGTGGCTCGGAGGGA
GGCGGCACCGGCGCCGCCTCCACCGCCGATGGAGTAGGGTAGCTAGGGTT
AGGGTTTAGCCCAGGGTTTAGGCGCCTAGTTGCCCTTCCCTTCTATATTA
TTGTACCCTTTTTTTCTTTTTATTGTAATGTTATCGGGCTATCTAATATA
AATGTTATCTAATATATTATCTATCCCGTGTTTTATTGTAATCTGTGTTT
TATTGTATTGTCATTTGTCAAAACACCCAAAACAACAAGTGCATAAAACA
AAAGACACAAAAACAAGTTCTCATATAATACTCGTGCAATATTTATAAAA
TGAGTGAAATTAGAAAACCTCAAAAGGAAGAATAAGTTAACGTTATGATG
GTTGATTATTTTCAAACAACATATGGTTCATTTTCAAACAAGACATTTAC
ATATTTACATAAGTTAAAGGGGCGCCTAAGTTATGTTAGTTAAATGGATG
CCCTTGGACTTCATTTATATATTTACTTTCGCAAAAAATAAAAGATTGCG
ACCTGAGCACGAGTATCTGCAGATCACATGTCCCTATTTAGATTGTAACG
CGGGTACCATTTGTTTTGCCCAATCTACATGTAGTTACTATTGGGCCTGG
ATACGACCATTTTGGCCTAGCTAAGTTCTATTTGGGCCTGGACTTTTTCA
ATCACTCCTCGTCAATTGTTTTTTTTAACTTTTCACCCCCCCCTCCCCTG
CACACGGACGTCCCCTGCACACTTACAAAACTGAAGGAACACTGAAGAAA
CTGACGAAACTGAAGGAACACTGATTTCGAAAACAGAGCAGCTCAAAATT
AGCCCGAATTTGTGTTGCATTTTATTCAAGCCAAAGACATAGACCATTAC
ATCTATTACAAAGCATCACTCGAACACTAATTCAAGCCAAAGACATAGAC
CATTACATCCATTATCAAGAGATAAACTAATCCGAGAGAAATTACACAAA
AATAAAAAAAACCGGCTATCAGATTGTCCTGCTTCTTCAATTTGATGATT
TGCCTTAGCTGCTTGTTCATCTTCTTCAGCTCGGCTTTCACTTCCGCATC
CACCGTAGTACCAGCGGAAATGGGGTTGCCACATCCCAATTGCTCCACCA
CAGACGGATTTTCGAGCTCCCGGGATGCTACCTCCACCCCAATTCGCTCG
ATGTACTCATCAAGCCACGCAAAATGCCCACATTTTGGTAGTTCCTGAAA
TCGCAGAGATGAACCCTAAATCCCAAATTCGATGAAATGCATGAAATTTC
GAAAGAAAAGCGAGAAATTGGCGCTCGGAACACTCAGATCTCACCTTTCC
CGGCTCGGGCTTGCTCTCACACTTCACAAATTCCCGGCCAATGTTGTCAT
TCTTGTCGGTGGATGTGACAAGCCTCTTCAGGGGCACGGTACGGGGGCAA
TCGGGGCACCTCCTCATCGGCACCGCTCCATACCGAGGCCATGAGCGGTG
GGAGGCTGAAGCAGAGCTCGACATCCCTCGCCGGCATTGCCGCACTTGCT
CGCCGGAGAAGAAAACAGAAGGGGATGAGATGCTAGAATGGTGGCGGAAG
TGCTCGGGTGCGGGGACGGATCGGGGCCAACGTCTCTCTTCAACCACAGC
GTGGGTCCCACGATATGAGGTGGACATCAGGTGAGTTCCGACGTGACATG
GAGAGGCTCTGGGTCCTACTGTGCTCAGCTGATTCGAATTCGTTGACAGT
CTCGTGGGGTTAAGTGGAAGTGTCGCACGGGAGCTATTTGCGCTTCAGAA
GTGTCGCATGCGAGCTATTCTTTGCAACGATGTCGCGTTCCTTCCAATTC
CACGTAAAGACGTCGCATGGAAGCTATAAGCCCAATCCCCAAACCCTCGC
CGGCTCATCCGCCCTCCCTCCACCGGCGAGCGCTTGCGCAACCACGTCTC
CCGCCTCGTTGTCAAGGAGGACGCGGGCAGCCCCGCCCTCCGTGCCCCCG
ACGGTGTCGAACGCATCAGCCGCCTCCCCGACGCGCTCCAGCGCAACATC
GTCGCTCGCCTCCCCGTCAAGGACGCCGCCCGCACCTCCGTCCTCTCCTC
CCGCTGGCGCCGGGTCTGGCTCTCCACGCCTCTCGTCCTAGTCGACGCCC
ACCTCCGCCCGAAAGGCTGCGCCTGGCCACCCACAACCGCCGACTCGCCG
GCCATCACTGCCATCGTCTCCAGTGTCCTCGAAGCGCACGCAGGGCCGTT
CCGCTGCGTCGGCCTCACTTGCATCCACATGAAAGCCTACCAGGACCACC
TCGCGCGCTGGCTCCAGCTCCTCGCCGCCAAGGGCGTCCAAGACTTGGTC
CTCATCAATCGCCCTTGGCCGCTCGGGGTGCAACTCCCGGCAATGCTCTT
CACCATCACCACTCTCACCCGCCTCTACATCGGCATCTGGAAGCTCCCGG
ACATTGCCAGGTTACCGCGCCGCACATCCTTCCCCCATCTCCATGAGCTC
GGCATCTGTAACGTCGTCATGGAGAACGGAGACATCGACGTGCTCGTCGC
CAAGAGCCCCGTCCTGGAGATCCTGAACATCCATGGAATAGACAAGACCG
TGCGCCTTCTCCTCGTCAGCCAGAGCATCAGGCTGTGGTGAAGGCTCCAT
GCCTCGATCGGCTCATCCTAGAGACATCCCGGGGTAAGAGCAACGCCGAT
GGCTCGTGCACCAGAATCAGGATTGATGATGCCCCCATGCTTCGGGTATT
TGGATTCTTGGAACCAGGGAATCACATCTTAGACATCCGAGACAGCATCC
TCATGGTACATCTCCTGTCTAAACTCCATCTCAAAATTTTCAACTAGTCA
AAAAATAAAAAATAAATGTGTACAGGCTGGAATAAAGGCGAGCCCAAGAA
CCATTATCATTAGCGTCAAGATCCTAAGTTTGAGTGTGCAATAA

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