Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

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GrainGenes Sequence Report: AA017345

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Sequence	AA017345
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA017345
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	GCTTCGTCAGGGACGTGGCGTGGCGTACCACGCCATGCAAGCAAAGCAGC GCAAGATGCTGTTTCGCTATGAAGCTTCGCGGAAGCTTCGTTCCCGTCCA CCCTTCCCGCAAATCATTAATTGCTTTTGCAAAGTGCACCATATACGGAG GCATCGTCGCATTCAAACCAGGTTAGGATCAAAACCCCTTTCTCTTCTTA GATTAGATTCATCTACACGTCGAGCCATCCCAACCGTACACATCTCTAAC CCCTCTGTATATACTATTTTCTTGTTATTTTTCAGAAGGATATCTCTCTA ATCTCTATCTACCAGTCCAGTGTCCTCTGAAGATCATCACAAAGAACCAT TGGTCGTAGCTTATCTCTGAATTATTGTGCTTCTGGTTGTAACATGGTGT GATGGGTCAATAATTCATTCCTTCCAGGAATAATTGCTCTTATGCTCCCC CCAATAAATATGCGTTACACCTCCTCCTCACATCTCGCACAGAATAGCAC AGCACGAGGTTCGTACGTAGACGTAGTACTTGACGCGCGCCGGCTTGGCT AGCTAGAGACAATTGTCTTCCGTTGAGTCGGGAGATCAATCGATCTACCT CGGCCCTCCGGCCATGGATCAGTCTGCGGCGGCGATGGAGGCGGGCGCGC CGACGAGGAAGGAGTCCGGGCGGCTGCCGTCGCGGCACGGTGGCCACGCG CATGGCCACAGCGGCCTCGCCCGGACGGCGCACGGCATGTCCTCGTCGTC GCTGCGGAAGAAGTCGGACGCCACGCTGGTGCGCAAGGTGCCCGTGGCCT CGCTGCGCCCCGTGCTGGCCAACCTCCAGGAGGTCCTCCTCGGCACCAAG CTCGCCGTGCTCTTCATCGCCGTCCCGCTTGCCGTCGCCGCCCAGTGCTT CAACTTCGGCCAGGTAACAATTCCGCTACTGTCATGATCCATGTTCTCTT CTCGTTCTTCCGTTTCAATTCGCTACAAAACACTGTCGCGATCAGGTACC AGCCTGCCTGCCCATCGTTCATTACACTTTCCATTTGCGTCGTGTCCTGT AGGTTACCTGGCCTCGTAATGCCACGGCCACATGGCGCACACTGACACGC ACGAGAAATGTGCTGCTTTAAAACATAATCAAAGTAACCTATCAATATCC GTGCGCGACCAAGGTACAGACTGGCAAACAGGCTCGTGTTTAGTACCAAA TGGTTGTACTCTGTCTGTCTCGTGAGAATGGAATGAAACGGATGCTTGTG GTGTAGGTGAAACAGCACATGTCAGGCCAGTGTGTTTAAACCGATTTTCT AATGGTGCCGTGTCGGCCTCTACATACATATATATGCTCTCTATGGCAAC AACCGCTCACCGTCTTTGTTTAAAAAATTGAAAGTCGCTTGCACGTCTAA ACCTTGATTGACGCGTATGATCTGTTCTGTACACAAGTGAGATCTTCTAT GGGATCAAAGCTATTATGTGTCCTTACTCAATATAGTTGTAAACCCTGAT TAGCACGCGCTGTTTGTTTTCCAACTACTCCCTCCGTTTTGGAAATATAA GATGTTTTAGGTTTGTGAAGAAGATGTATCTAAACACATTTTAGTGTCTA GATTCATTTAAACATATACACTAAAAGGTGTCTAGATACATCTCCTTCAT AAATCTAAAACATCTTATATTTATAAACGAAGGGAGTACAATGTACGGTA TATCTCTAGGATTTAAGTCTAAATTCAGGTAGACACCTTCCTGCGCGTTC TAGATTTCTAAAACCTGAGCAATAGAATATTTTCTAAAAGGCCAGAGCTA GGCGTCTCCGAACAATGGGGTGTTCGCATTGTCCTGTTTCTGTGCATGAC ATGTGTCCTCAAAATCACCCTAAATCTTGCTTTTACTGCAAAACATCTAT TTTTTGCTACAAATGTCTCTACCTTTACTTCCGAAGCAAAAAAATGATTT ATTTTAGAAAATAAAACGTCTCGCCTGAGACCTCGTCGGACTCGCTAGAC ACCATGCAGCAAAAAAAATTATGATAATATAGCAACCGACTTCGCCAGAG ACATCGTCAGAAAAATCTCGTTGGTGACTCGTCGGAGACCTTGTAGCAGA AAGTTGTAGCAAAACCACAAGTCGGTTGTAGCAACAAAGTTCTTCTAACG TAGCAAAAAAAACCTATTTCGGTGGGGACTTTTGCCAGGGACCTCGTCGC AGAGCTCGCTGGACATGTAGTGTCAAAAAAATTACGCTATTATAGCAAGA TCACAAGACGGTTGTAGCAACAAAGTTTTTTCTAATATAGCGGAAAACCT ATTTCGTCAGAGACTTTTGCCGGGGACCTCGTCAGAGAACTGGCTAGACA TGTAGTAGCAACAAAATTGCGCTATTGTAGATGGTTGTAGCAAAAAAATT GCGTCATTGTAGCATCATTCAAGCATTTTTTTCTAGGTAAAAAAACAGTG CAGCACTAAGAGCAATAGCAAATTAGCAATATAGATACGAGTATGTAGCT AAAAAATATAAGATATGTAGCAGAAAAATAAAACTAAAAATCTGCAGCCT TGGAAAAGGGCAGGCGGAGGAGGCCTCAACGGCCATGGCCGCAGGCCACC TCGCTCCCTCGGCAACAACGTCACTGCTTCGTGGGCATGGAGGAGAGCAG GGGTGGAGGCCAGCATGGGCGGTGGAGACCTCGCCGGAGGCAGCGCCGAC CAGAAGCACCATGTGAGCCTAGCGGGAAGGAGCGCGCGCGAGGAGTGCGT CACGAAGGAGGCGCGACAGAGGCTCGCGGCGGCGCCACTGACATCCACCA TGTGAGCACCATGGGATGGGAGGGAGTAAGGCGAAGGACAATACGGAAAC GGAGGACAGACCGACGGAGGAGGCTTGCGACAGGGAAGGCGCACAACGGT GGGGCAGCCGCGCAGCGGCGGAGGAGGCGCACACGAGACGGCGGTGGAGG AGGCGCCAGCACTGCCGGCGACGTTGGGAGAAAACTGGAGCTTGACATAG AAAGAGAACGGGATGGAGAGGATAACATGTGCGGGATCCACCTACCAACC TCATGCCACGAGGCTGTACGTTCGACGGGCGATCCGAATGATGGAAGTCA CACGATCGTTCGGGGGATACGTATCATTTTCCTTCCTAAAAAGGGGGCTA CATGGACCGGAGTACTCAGGGCTGGGAGGAAGTGACTTAGATTATATTTT GAAGTTTTTTTTACATGAAAATTCAATTAATATATTAATAAGAGAAAACT GCCAACTTAATATATTAAGTTGCAAAACTCGAACTAACTCTTGCACATTG GACGTTAGATAGCGGGCTGTTTTTTTATAAATTAGAAAATTAGATTTCTT GTTTTTTTCTTGTTTTTTAATAAAATACATTCGTGTATTTTTACGAATTA ACTCTTAAAAATTATATTTCTTATCTTTTTAAAGGCTAATTCATAAAAAA AAAACGTCACCTTAGCAAGCTAACGTCCACCGTGACTGAGTGATCAAACA CTCCTGTGAGACAACTTTGTGACCTATAGTTAGTGTTTTACAACTTCATA ACCAATGCTCTCATTTTAGCAAGTTGATGTACCAAATTTGTGTTTTAGTC TATTAATAATTATTAACAACTGTACTACAAAGATGTCTAGAAGTAATAAA ATTTACATATACGTTTCTAGACACCTAGCGATGACTATAAATATATGAAA ATTTTATCTCGTACAACTCAAACAAAAACCACTAACACGAGCCAATGACG CGACACCGTCCTCGTCCCTGCAGAAGATCAAACAAATAGACATGAAAATT GAACGAAACCGGAAGACCTACCAAACACATGACTCCACGCCTCCACCTAT GCTAAACGATCACGGGAGCAAGGGTAGTACTTAGATGACCTTATTCTGGA TTAGGATTTAGCCGCCGGTTCACCATTCCAAAGAAAATATCAAAAAATAC TTATAAACAAAGAAACATTCCGTTGACGAGGGGCCGTCGCCCGCCGAACC TTCAAAGGCCCAAGGCAACCGCAGACGGAGCAGAAGAAGGGTCGTCATCC GCCGCACCATCAATGGCAAGTGAACAGGAGACGGGGCGGACGAGCGACGT CGCAGACGAGAATCGGAACCATAGATGAATAGATGAGTTCTAGACTGGCC TCACAAATGGCTTCTTCCTGTCCTCCTCGTGTACGTATAAAATTATGATC CGTAGTAATTGCGTTGGCAATTTCTTGGGTCCTCACGTAAACCTTGATGC GACTCTAGACTAACAGCCAAATATGCACCGCCAAGAGAACAGTGGATGAG CGTGCAGCCACATCAGCAGATACGAGACGTCATTCCGGCTTAGAGCATCT TTACACGTTGGGCGTATCCAGGCCATTTTAGGCCGAACGAATCGTGTTTT CGGTCTAGGTACGCCCAGTCGCGTACCTAGGTCATGTTCTTAAGTTTGAC TAAATTCACTTAAACTCGGCGAATATAGGCAGAATTTCATTAAAGCAGGT GAGGAAGGTACATAGTACATTGGTTTTAACTAGGAAAGGACACTGCTGTG GCGACGCCGCAATGGTCGACGCCGGACGTCGCAACTACAGGTCGAGGCGG GGGTTGTTGCCGGCCTCGATGTGCGCCACGACTCCGGCGAGAGTCCGCCC TGAAACGCTCCACCAGCGGCGGTAAGCCATATTGTTACGCGGCGGCGGCG AGACCGGCGGTCCTTCGTGTCGGGTGAGTTCCTCGAGGCGCCTGCCGGCG AAAAACTGCCTTCAGAAGACCAGGTTGTCCTGATCCTCGGCGAGTGCCTT GCCTTGCATGGCGGCGATAGCGGCCTGGATCTCTCCGGCGAGTTTTGGGT CTTCCATGGCGGCAATAGCCACCTAGATCTCTCCGACGAGGTCATGCCCG TCCGGCACCGGCGGAACAGGGATCCCACCGGCGTTGAGTTTCCAGCCTAG GGGGAGACGCGTGTCTGGCGGGGCCGTATAGCGCGCCTCGCGGAGCAGCC GGGCTTCCCACGGCGACAGCGTGCGGCGGCCGGCCATGGCTTCTCGGCGG AGTTGAGGAAGAAAGGTGCGGGCGTCTGAAGTTCGCGGGAGTTGTGGTGG TGTGAGGGGCTGTGAAGAGAGACGGTGAAATGTACGACTTTTATAGGCCG GAAGAATGGCGGGAGGGGTGTAGCGGCGAGGGCGGGAAAAGTGGAAACGA CGGGAAGTTAGTGACCGCCGGTCCGTCGCGGGAGCCGAGGCGGCGACGGT GGCGCCGTAAATCGGCGACGCGTGATCGACGCGACGGGCAGTTATTGCCC GGCGGTCGCCGCGTGGTTTCAAGGATGACGACGACTCGGCTTTCGTCACT GACTCGGTGGGTCCACGCGCTGTTTTGATTTTTTTTCGCTGATTTCGCTG AGTCCGGCGTCCCCAGGGCTACCCGGAAACCTGGGTTCGGCCTAGGTAGT CTGGACCAAAAATGGCCAAATCCAGCGAAAACAGGTCCTTAGGTACGTGA CTGGACCAGTTTTCGGCGTCCGGATCGGCCTCCTGGATAGGCGAGTGGAG ATGCTCTTATACTTAGTTTCGTTTAATCCAACATGGATTGGGCTTTCCAG CCCAATAAAATAATTTTCCCAGACCTGCAAATCGGTGGTCTTGGTTTATC AGTGAGATTTTGGCCCAGCCTGTCGCGTCTAGTTTCTTCTGAATCGGTTT TGGCCCAGCCTATCGTCTCAAGTTTCTTCTGAATCGGTCTGGGTTATTTT TCTCGCCGGCTGATATATTGTACAATTCCACGACGCTGGAGAGAGATAAC CGTGATGGAGATCTTGCAACCCTTGTGTTAAATGGACACGTATTTAAGGG CATGTACGATCCTAGTGAAGGCAGGTTTTTTCGTAGCCCTCCACGTAATC TAGAGAAGGTAACAAAAATAAGTTATACAATGGGTTAGAGTTATTTCTTA TTGTCACCTCTAAGAATTAATGTGAATCGACTAATTATTGTAAAAAATTG TGTTGATAAGAGAAGACATAAGCTACAATGAAGAAAAATAGTTTTCTCTT ATTGTTAAGGGATCATCCCTTAACTAATGGAAGACAAACTTCTCTTTCTT TATTCTCTCCTCCAACTAAACGAAAATCCAACGTGACAATTGTAAAAAGG AAAAATTGACGTCACCGTATTGTACATGCCCTAAAAGGTTAGACGGTCCA TACATGGATTTGGTGAAAGAAAGAGATTCACCCGTTCCCTGCGTGAATCC GATTCCATGCTGGGATTCAATCCCATGAAACCAAAAGAGGCCCTAGGCCT TGTTCGTTTCTTGTGGATTAAATCCGGACGCGTATTTGTTCTAGATTTGG ATTGGATTGATCTCATCCAACCACCAAATCCAAACTTACATCCGCTCAAT CCTTTTCCATAATTATTTATATTCCCATCAGCCGTTCTGTTAATCCAGTC CCCATTGTCTTTTTTATGTGTTGTCACTCAGTGTTGCGTGATGGAAATTA TTTCACGTCTCAGGTGAAGAAAATTTTCCAGCCCAAATCAGTGGAAGATG GACTGGATGAGTTGGGCTAAAAATCACTATATCTAAACAAAGACTAGAAA TCAGCTGGGCTGGAAAAATTATCACGTCGGACTGGAAAACCTTGTTCAGG CTCCGATCCAGGGCAATCTATGCCGATGTGGGATTAAACGAATGGGGCCT TAGGGTGTTAATGAGTTCCCGTGTTATCTTGGTAGGTTTTGTTTTTTCCG ATCGAAGTGTTTATTTTGGATTGTTTGTGGTCTGGTGAGTTTACCTTTAG GAGTCATGTGAGGTAATTTTCCGCTGCATCGTCTACACCCACAAATTTGT TGAGAAATCTCAGTGGTCATTCGAGTATTGCACAAACACATGTTCCTTTG GTTTGTAAGATGCCAATAATATTGGAATAGAAAATACGTATAAATAGACA TCATGATATGCTGAATCCTAGAACGATTGAAATCGTAGGATTAATTGCAT ATTAATCCTATAAATAATGTTGAATGGCTACTTATGTTAATAGATCGAAA TATAGATTGCATATTAATAATTTTTTTGTTGCCTGAAAGAATCACGTCCA GTTCTATTAAAACAAAGGAAATTTTCCTGCAAACAAAATAAGCTTATAAG AATAATTTATAAGAAATAGAATTATCCAATTCATATGAAAATTTCTTTAA ATCAAAGAGGTCAAAATTGTGTGCACATTTCCACTAGTAGCCACGAACCG TTTTTACTGTACTGCAGCCCTTTTGTTCGTGGTATAGTGCAAGGAGTATT TGCTGTTGCTCGAAATTACCGAGTCTTAAGAGAGTTATTATACTAGTACT AGTATTTAAATTGGATCTTGGTTGGCAGGTATGGGTGTTCGCGCTTAGTC TAATCGGCCTCATTCCTCTCGCTGAGCGAGTCAGCTTCCTGACAGAGTAA GTCTTTGCTCTTCATGTTACACGCTGGTTATTAGAAACAATTCTCTGTTA TCGGATGCTGGCTTTATATTTGCTGCTGGTAATTCTTGCAGGCAGCTTGC GCTCTACACTGGCCCCACCAGTAAGTCAAGCGAAACCTTCCCGAATCCCC CTCTCTCCCCCTCTCTGTATTTAACGCGAGAGTATGGGTACCATCTCATT TTCCCGACTCATTTTATATACTCTTGGGTATATGTACTCTTATATTTAAT GTATCTCATACACGAGGGGATTATACATACTTATTATTTTTGGTATATCT TATTATTTATTTTAAGATACCTCAATACAAATACTTTTGCTTCGGTGTTC CCCCTCCCGTTTAAACTTTGACGAACAAAAACTCGATATCGATTGTTTAG ACCGTAGGAACCCATCCGACGTCTGTATGGTATACTCATAGTACACTTAT ACTCACGTGCCTGCGGGGAACAAAAATCGATAGTTATATAACACATACAA CAAAAAATTGAAACATGACATGCAAAGACTGATAATGAGAGTTGGAATCA GTCGGCCGGGGCATAAAGTATATCAAGTACACATATAAAAAAAAGTATAT ATGTGCAAATAATATAGATAAACTTATATAATTTTTTTCACACTCACTTT GAGGAATCTAGTATGTAGCTATGAATTATGATAAAAATTATAAACAAGTA TAGTAAACTCATGTAAGCGGTATAATGAACGTGAGAGCACGTACATCCAG GTGTACCATCTTATTTTCCAATAAATATATATGAGATGATACACCTAGGT ATACGTACTCCCATGTATAATATACTGCACACATGAGTTTATTATATGTG TTTATAATTTTTAATCTACTTCATACATAAATACTAGATACCGCAAAATA AGTTTTGTGAAAAACATTATGTAAATCTATATACCTTATATTACTTGCAT ATATACTGTTTTTCTGTACTAAAAGTGGTATATTAAATAAAAATAATGGT TTTGATGAATGTTTTTCATACTAGTAGTACTTGTGTAAGGGTATCTTAGA ATAAATAATGAGGTATATAAAAAATAATAAATAGGTATGATACCCTCATA TATAAGGTATATTAAATATGAGAGTACGTATACCCAGGAGTATATAAAAG GAGTCGTTTATAGGACTATATTGAATAAGGACCATGTAAAAGGAGTGTAT ATATATATACGTATTCAGCATCCAGTGTTATTCTGCACCCCACATATTTT TATGTTCTTATATTTAGAAATTTACGTTTTATATACTAATAATTATGTTT ATATTCATCAGAAACGCAAAAAAAAATCGCCATAAAAATACAATTTATGA GCCATTGTAGTATAAAAAACTTACAAAAGTACACATTTTTCTAAATATTT TTATATTGTATGTAAATAAAATAAATTATGACATGTCTAAATTTTTTTAT GTTCTTCCTGACTACCGAGGTAAGAGAAAATTTACATGACATAAAAATTA TTTACGGTTTGTAAGATAGAGGGTGGGTGAAGAATAACTATTCTACACTC TAGGGCGCCACTCTAGAAACCCTATTCAGCACACTAGATACAGAAAAGTT ATTTTACACCTAATATATTTTTAAGTTTTTAGATTAAAAAAATTATATTT TATATACGAATAATTATGTTCATATATTCACCACAAGCAAACAGATCCAA AAAAATGGAGGTTACGAGTCACTTATAGTGTAAAAAACACCCAAAATATG TATTTTACGTCATATTTTTATACGACATGTAAACAAAAAAATATGTTATT TCTTCTCGACTTACGAAATAAGACAAACTTTACGTGATGTAATAGTAATA TATCATTTTAAAGATAGAGGGTGTATGTAAAATAACTGATGCACTATGGT GTCCAGACATATAGTGATGCTATTTGACACATGGTATGTAAAATAGTTAT TTTTCACCCACTCTCTATATTTAGAACGATATATTATTTTTATATAGCTA TAAACGATTAAATCTCGCCGGAAACATGTCGATGTTGTCTGGAACGGTAC TTCTGTACCTGTAGGAGTTCAAGTAGACTTGTTTGATTCCACGCGCGCGT TGCAGTTGGCGGGCTCCTGAACGCGACCTGCGGCAACGCGACGGAGCTCA TCATCGCGTTGTTCGCCCTCATGGAGGGTAAGATCGAGGTGGTCAAGTGC TCGCTGCTGGGCTCCGTGCTTTCCAACCTGCTGCTCGTTCTGGGCACCTC GCTCTTCTGCGGTGGCATCAAGAACCTCGGCTCCGAACAGCCCTACGACA GGGTACGTATGTGCGCAGATCATTTCTCGGTCGAGATCGATCGCAGCTTT CTTACGCTCGACTCATATGCATTGCACGTATACGCGCGCAGAAACAAGCG GACGTGAACACGGGTCTGCTGGTCCTGGGCGTGCTGTGCCAGTCGCTGCC GCTGCTGTTGCGCTACGCGGTGAGCTCCGGGGAGCACGCTGTGGCCACGG ACACCACGGTGCTGGAGCTATCCCGGGCCTGCAGCTTTGTCATGCTCCTC GCCTACGTCGCCTACCTCTTCTTCCAGCTCAAGACACACCGCCAGCTCTT CGAGCCGCAGGAGGTGGAGGGCGGCGACGAGGAGGAGGCGGAGGAGGAGG CGGCGGTCCTAGGCTTCGGAAGCGCGCTCTTCTGGCTCGTCCTCATGACC GTCGTCATCTCCGTGCTCTCCGAGTACGTCGTCGGAACCATCGAGCCCAC CTCCAAGTCATGGGGACTTTCCGTGAGCTTCATCAGCATCATCCTGCTCC CCATCGTCGGCAACGCCGCGGAGCACGCCGGAGCCATCATCTTCGCGCTC AAGAACAAGCTCGACATCACTCTTGGGGTGGCCTTGGGGTCGGCGACACA GATCTCCATGTTCGTGGTGGGTACATTCACTACATTTCATTTGCAGGCAT GTCCCTTGTCCAAATCGCGGACGATGGACAGATCGAATTTACGAATCTGC TGCACTGTTTTCCAACTTTTGGTAGGTGCCATTGAGTGTCCTTGTCGCTT GGATCATGGGCATCCAGATGGATCTGGACTTCAAGCTGCTAGAGACCGGC TCTCTCTTCATCTCGGTGGTGGTGACAGCATTCGCCCTCCAGGATGGCAC GTCACATTACCTCAAGGGGGTCCTCCTCCTCCTGTGCTACATCGTCATCG GCGCTTGCTTCTTCGTTACCAGACAACCAGCACGTACGTTTCCCTTTATA CCACAGTAACAAAGATTTACGCTAGCTTGGTTTCCTCTTCAGCTGTTCCG ATTTCAGAATATCTTCTCTGTTTGACAGATCAACCAAACAGCAGCGGCAG CCTTCTGGATGGACCAATGGGTCCCATGAACGTCCAGATCGCATAACTGG TAAA

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