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GrainGenes Sequence Report: AA020877

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Sequence
AA020877
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA020877
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
GCACGAATCTCCAACTTACAGGGGATTGCTCTTCCTCCACCTAGCCATCT
ATTAGTAGCCGGCCGGGGCGTGATACCAGCACCAGATCAGATCAGCAGCC
ACAACACTCAAGCCTCAAAACATTAGTGAGACACTTTCCATCCATCATCA
GCAAGTATATACAAGCTGATCCTATAATGGAGCTTCTCCACTGGGCGTCG
TCCTTCCTGGGTGTCATGCTGGCCACAGTGGTCTTCCTAAGGGCTGTCCT
CCGCCGCCGCAGCAAGTACAACAAGCTCCCGCCAGGCCCCAAGGCGTGGC
CGATCATTGGCAACCTTAACCTCATGGGCACGCTCCCGCACCGCTCCATC
CACGAGCTCTGCAAGCAGTACGGCCCGCTCACCCAGCTCTGGTTCGGCTC
CTTCCCCGTCGTTGTCGGCTCCTCCGTCGAGATGGCCAAGTTCTTCCTCA
AGACCCGCGATGTGGTGTTCGCTGACCGGCCCAAGTTCGCCGTCGGCAAG
TACATCACCTACAACTACAGCAACATCACCTGGTCCCCTTACGGCGACTA
CTGGCGCCAGGCCCGCAAGATTTGGCTCACTGAACTCTTCAGCGCCAAGC
GGGTCGAGTCATATGAGTACATACGCAGAGAGGAGGTGCTCGCCCTCCTC
GGTGACCTGCATCGTGGCGCCGTCGCGGGCCGCGCCATGGTGCTCAAGGA
CTACCTGTCCACCATGAGCCTGAACGTGATCACCCGCATGGCGCTGGGGA
GGAAGTACCTAGTAGGGAAGGAGGTGATGGACCTGGACCTGGAGGAGTTC
AAGTGGATGCTCGATGAGCTCTTCATCCTTAGCGGCGTGCTCAACATTGG
CGACTCCATCCCGTGGCTCAACTGGATGGACCTGCAGGGGTATATCAAGA
GGATGAAGAAGCTGAGCAAGATGTTCGACCGGTTCCTGGAAAACGTGGTG
GAGGAGCACTGTGAGCGTCGCCGCCGCCATGACGGGGATAGCTTTGTGGC
CAATAAGGACATGGTCGACGTGCTGCTGCAGTTGGCCGGCGACCCCGGGC
TTGAGGTCAAGCTCACGAGGGAGGGCGTCAAGGCTTTCACCCTGGTAATA
AATCAAGTGTTATCCTTCCTTCTCTCGCGCTAGCTAGCTTTCACTGTTCA
TTAATGTTTCCTCGATCGGTTAGAGATCATATCACAATCGCGCATATACT
GGCACTTCCAGGACCTCATTGCCGGAGGCACGGAAACCTCGTCGGTGACG
TTGGAGTGGGCCCTCTCGGAGCTCCTGAAGAAGCCCGAGGTGTTGGCCAA
GGCGACCGAGGAGCTGGACCGCGTCATTGGCCGAGGCCGCTGGGTCACAG
AGAAGGACATTGCGAGCCTCCCCTACACACAGGGAATCGTGAAGGAGACG
ATGCGGCTGCACCCGGTGGCGCCGATGTTGGTTCCACGGCTTTCTCGCGA
AGACACGTCCGTCGGCGGCTACGACATCCCCGCCGGGACACGCGTTCTAG
TAAGCATGTGGTCCATCGGCCGTGACCCGGAGCTATGGGACGAGCCGGAG
GAGTTCATGCCAGAGCGGTTCCTTGGCAGCAGGATCGACGTCAAGGGGCA
AGACTTCCAGTTTCTGCCGTTTGGGTCGGGACGCAGGATGTGCCCCGGCT
ATAACCTCGGGCTAAAGGTAATTGAGGTGAGCCTTGCCAACATGCTGCAC
GGCTTCGAGTGGAGACTCCCTGATGGCATGGCCAAGGAGCAGCTCAGCAT
GGAGGAGATCTTCGGCCTAACTATACCGCGCAAGTACCCTCTAGAGGCTG
TCCTCGAGTCTAAGCTCCCAGCTCATCTCTACGCCAATGCTTGAATACAT
ATATATACTCTCTCCGTTTTATAATACATGCACTCGTGTGTTCGGTAACC
ACGTCTGTTGCAATAAATGTATTATACTATGCTTGCCGGCCGTGAACAGC
ATGCATATGGGTCCAAAAACATGTTGCCAGTAAAAAGATTTATTAACAAC
TTATGTTTGTGGTCGACTCCAAGGGACTTGGGAGTGAATGTCTCCCTTAT
AAATTCCATACGTATTAATAGGACACATTTAGAGAAAATAGTACTACCTC
GGTTCTAAAAAAAAGTTATAGGCCTCAAGCCTTGTGATGGAGGGAGTAGT
AGTATTTGTCAAGAAGATTCTACTCCTTCCGTCTCGAAATAGATATCTTA
AATTTGTTTTAATTTATATGTACGTAGAAACTAGATTCTGAGAGCAGCAA
CAGGTGTTCCCAAAAAACACATCTGAGAGATCCCGCACCCCTCCTCCTCC
CGCACCCGGGCGGCAGCGCCGTGCCGCGCCGCGCCGGGCGGCCTCCCTTC
CCCGCCGCTGAGCCCTCCCGTCTGTGTCCTCTCCTCCCCGTCGCTGCCGC
CCGGTTCGTCGTCAGGGAAAGACCTGGGGGCGTGGCGACGGCGGCAGCGT
CATTGATCGCGATCTGGCGGAAGGCGGCGACGTCCGTCTCGGCTGGTTTC
GCGGTGGTGTTGCGGCGAGCGGCGACCGGTGATCCTCGGCCCAGATGGCG
GCAGGTGGCAGCGGGGATCTAAGCCTAGCCGCGATCTGTCCCGTCCGTTG
GCCTCGACGCCGGCGCCCAGGCGACCCGGGCCTTGTCCGTGACACTAGGG
CGCTTGGGGCATCTGCCCCCGGCATGGTGGTGGTGGCCTCCTTCTCCGTC
GGAATGGTCGGTTGGGTGGTCTTGCCATCTTGCGGCGGATCCTGCTAGTT
TCCGGCGGGTGGCGTGGGGGCCGCTGGCTCGGTTTAATAAAGGAGGTGGT
CCTGGATCCCTCTTAAGCCAAGACGATGATCTGCCGGATGTTGGTCTACA
TTGATCTGGTTTCTGTGTCGTGTTCCGGAAGGCTCCATCGGCGAACTTCA
TAAGTGTTATCATGCCGTGAGTTTGCTGAAAGGATTGAATTCGGTCGTTC
GCACCCATATTTTACTCTGACCGTTTGGTTTTAAAGGATGTGCTTCGAAG
CTTTGTTGGATGTTATTATCATGGGACATGTTCTCGTTCCATGATGCTGA
TGGAGAAAGTCATGGAGACCGAGATCCGAGGACAGACAATGGTGGTCCGA
GTCTGGGTGGTGATGAGGAATTGGCTAGGTGACTTGTGAATTGGAGAAAT
GGCATGCAAGTGGGGGCGACTGCACATGAGAGGTTTATGGTCCTACCTCT
CAGGATGAAAACCCAGGGTCTGGCCTTAATTTATTGTGTCTGGCAATGGC
CTTGTTGAAAGTATTGATTTGAGATCATGGACTTTCTTCAGGATGAAAAT
ATAGATCTTTCATCAGGCGATAACGGTGTTTGTGCACTGTTTCCTTCTTG
GAGGCGTCGTTTTTGGAGAAGTTGGATTTCTGATGCTGTCTTGGTGGTGG
TAGTATTACTGTTTCAATGAATGAGTCACTGTAGCAGGACTTTTCTTTTT
TGTAATTCTTTTTTCTTTTTTTTTGCTGTGTGCATCCATGTGGCCGCTAG
GGCAATGTGTCTTTGCAGAGGCTGGGTGTAATTGATATCCTCTGATATTA
ATATATGCTCTTTTCCAAAAAAAAATGTAGAGACTAGATACATTAAAATC
TAGACAAAATTAAGACTTCTATTTTGAGACGAAGGTAGTAGTTATGTTTA
ATCTTGACTAGCCTTTCAATATCTAGAATTCAGAGAGAGCATTGTGGTAC
AAGGAATCCTATTTGTCATCTTCTCCTTCCGCTCCTTTTGCTGGCCGTGA
ACCGTATGTGTGTGTGTGTATCCATGTATCAAAGGCACAAAACTATTTTG
GTGGAATGGTCCGACTTATACTTGGAAATTCGCTTCACATGAGGAAACAT
TGATGTACACTATGGAGTTCTCCAAGAAACACGTGTTGAAAATATCAGTC
ATTAGCTCTAGCAATTATCAAAATTATTCTGAATTCAATAACAGTGAAAA
ACACATAGTTGCCAGCAATACTTTCTAATAAGGTTTGATAAGTGACGCAA
GAATATGTGGTGGCTCCGCTTCCTATTTTACGAAGAATATTTCACATATC
AAAATTGTAAATTAGTTCCTATGCTAACAGGATATAGTAAGAGTGGGGAG
GAAAAACTGTTGTGAATCTAGGCAATATTTTAATTATATTAATCTATAAA
TAAAACATGAGACAGATGTACGTACTGATATTCGGTAATGGAACCGTGAA
GTACTAGACCAATCGTAGAATCATCTACGGACATTACTAGTACTATATAT
GCACACAGAAATAAGTAGGCCAATTGGCTGTAGCGTGGGCCCACTTGAAC
GCAGCGGCGGCCTGTTCGGCTTCAGTAGCCATGGTGATGACGGAGGCGTG
AAAGTGATGGATCGAAGGCGAGTAGTCGTGTTGAAGATGCTCCCCAAAAA
CCTAATTGCTCCTCTCCCGTACAGGATCTGAAGAGGCGGGGTTTCAGAGG
CCTGCTCTTCCGTCAGCCGTGTATGCGGTAGACGGAATGGGATCACCCGC
AGTAGCAACAGTAGAGGAAACGGCAGTGGCTATTGCGTGTGGAGGCAGTG
GTTCTCTTCTGTATCTGAAGAGGAGAGAACTCTTCAATATATAGGCACAG
ATGGATATGAGATGGCTCAACGGAAAGAAACAACTGTAATTAATTACTAG
AAACACCCATAATAAATTACTGAAAACATATGTACTTAAGACAAAACGTT
TCAACTCGTATTCATTCTCATTAACGTTTTAGTCGTTTCAGTTGCAACCA
TTTGTATCCCACTCCTGCGCGACAAAAAGAACACATCGGCTCGGTGAGAA
TCCCGCGACCCGCGCGTGCCGTGCCGTTTCGTGCCGTGGCGAGGCGAGGT
GGGCGGCGGATGAGGAGGAGCGCGCGTATAGGACGCCTCTATTCTCTTCA
CACCAAGTCATACTAGTGGGAGAAGAGCTCACGTTATATGTTGGTGAAAA
TCTCTCCTAACTAGCCATGTGGGACTAAACTCCCACCACTCCTCTTGTCA
TGAATGTTCCCTTAGGGATTTTCCTAAAATATTTTGATGGGCCTAAAGCC
CACCTTATATTTCAAAAATCCCCCACTAGATTCCAAATGCCCATGGTGTT
TCCAACACTGTTTTGATATATTGGTATTTTCAGTGGAGACCTGTTTAAGG
TTAAACATCCACCTAGAACAGATGGCTAGACTCCTTTACAACTTGTTTAA
GGTTAAACATCCACCTAAAACAGATGGCTAGACTCCTTTACAACTGAACA
ATGGACTATGTATTGAATTGTCAGTTTGGCGTAAATAGGTTTCACCGAAC
GTCTTACTAGTACTAGGCTGCCAAAAGATGATCCCTTGGGTGGATGATAT
TAGTCATACTCCTGGACTTTTTATGAACTTACTAGAGATCAACCCAATCT
CATAGGCTGTGACCAGCAGTCGGGCTCATATAGGTGTGTTCCTTCAAAGA
TTACTTTGTAGGATAGCATCTTGCTTATAAAAGATTTGGAACACATTAAA
ACAAAAGTCAACCTGCCATACAGTTTCTGAGAGTATTGTATCTCCAATGT
AGTGAGTTAGTAAAACTACTCTCCTTTGTTAACCCCTAGCTTGTTTTTCC
AGGTCCTACTTCACGAGATCTCTGATCACCTAGGTTGGGTTACTACCATG
GTAACTTATGTGGGTCTCATACCCATCTCCCACGATGCATTTTCTATCAC
AACATGGGATATCCCTTTAGTAAAGGGATCTACCAGATTCTTAGCCGAGT
GGATATAATCCAACGCTATCAGTCTGGATTTTCTTAAATGTCTGACAACT
TTTAAGCTCATTCTTATGTGTTTGCTGGACTGCATGTTGTCCTTTGAACT
CTTTACCTTGACAATTACAATTTGATTGTCACGGTTCATAAGGATAGCCG
GTACTGGGTTTTCAACCACTTTCAAGTCAATCAAAAGATCTCAAAGCCAT
CCTGCTTCGACACCAGATGTGTCTAATGCTGTTAATTCTGCTTCCATTGT
CGATCTCGTTAGGATTGTTTGCTTGCAAGACTTCCAGGAAACATCACCAC
CTCCAAGAGTAAAGACATACCTCGTTGTGGCTTTCATCTCATCAGCATCA
GAGATAGAATTTGCATCACAATACCCTTCAAGCACCGACGGGTACCTAGT
ATAGTGAAGTCCATAGTTCATAGTACCTTTCACATAGTGCATAATTCTTT
CAGCAGCACCCCAATGCACATCACCCGGATTGGAAACAAACCGACTCAGT
TTGCACACGGCAAACATGATATCAGGCCTTATAGCATTCGCTAGGTACAT
GAGTGAGCCAATGACTTGAGAGTATCTTAGCTGATCCTAATGGAGCTTCT
CCACTTGGCATCCTTCCTAGGTGTCATGCTTGCCACAGTGGTCTTCCTAA
GGGTTGTCCTCCGCCGCAGCAAGTAGAAGCTCCCGCCAGGCCCCAAGGTG
TGGCCGATCATTGGCAACCTTAACCTTATGGGCACGCTCTTGCACCGCTC
CATCCACGAGCTCTACAAACAGTACAACACTACTAGGAAAACGGCATTTA
GTGGCGCACCTGAAAAGGCCATCTGTGGCGCACTAACAGTGCGCCACGGG
CCTCGCGCTACGGCTATCTCCTAGCCGTGGCGCACTACCTGGTGCACCAC
GGTTGTGTCGAGATAGGCGTGGCTCACATGCCAGTGCGCCACGGAAAGTA
GTCCAGGTGCGCCACGCGTATGAAACAATAACCGTGGCGCACTAGGTGCT
GTGCGCCACGGATATAAATTTCAAAATTAAAAAAAAAGCAGCAGATCTGG
ATCTCGTCGTCAGTGTCGTCGCGCGTCGGTGCAGGTCGCCATCGTCGCCT
CGTCGTCACCTCGTCGTCGTCGTCGGAACTGCAAGGAGGAGGAGGAGAAT
AGGAGGAAGAGGAGGAGAAGAAGAGGAGGAGGAGGAGAAGAAGAAGAGGA
GGAAGAGGAGGAAGAGGAGGAGAAGAAGAGGAGGAGGAGAAGGAGAAGAA
GAGGAGGCCTCGTCATCTTTGGAACTACAAGGAGGAGGAGGAAGAGGAGG
AGAAGAAGGAGCCCGCCGTCTCGTCGTCGGAACTGCAAGGAGGAGGCCGC
CACCATCACCATCTTCACTGCAAGGAGGAGGAAGAGGAGGAGAAGGAGAA
AGAGAAAGAGAAGGAGAAGGAGGAGAAGAAGAAGGAAATGAGAAGGGAGC
AAAAGGAAAAGGAGAGAAGGGGAGGGAAGGTGGGCGGGGTGGGGATTCGA
AATTTGAATCCCGCCCAAGCTTATCCGTGGTGCACTAGGTGGTGGTGCGC
TACGGGTAAGTCGCCCTCTATTTTTTTTCTGCAGGAAAAAATGGTCTTTT
GACCGTAACTTTTTACTATTTTCGAATTTTGAAAATCTAAAAAATCGCTA
AACGACCGGAGGTGGTTGCCAGCGGATGCGAAATCTCGTTCTTCTCATTT
TGGTATATTATACGATTTTTTTTCGATATCGTATGCAAAAGTTACGGCCT
TTTTACCGTGGCATGACTTTTTTTTGCAAATAAAGTCGAAACTCATGTTT
GTTAATTTTACTAGAAGCTATACCACATTACCTACCTAAATATGAAAGGA
TTTAATTTTTTGAAGTGTTTATCATTTTCTTTTATTTTTTGCAAAGCCTA
AAAAGGCGATCCACGGGGGGAGGGGGGGTGGAGTTGGTGCAGGATAGTTA
GGCGTAGGGCACTAGGGCAAGGTGCCCTACTACTAAGTTTATATATCCGT
GGCGCACATGCGATAGTGCGCCATGGATGTGTCTGGCCGTGAGGGACAGA
TAGGGGCATGCGCTTAGGCGTAGCGCACCCCCTCCATGTGCGCCACGGTT
GACACTAACAACCGTAGCGCACCTACCCTATGTGCGCTACGGATGTTTGG
CGTGCGGCTAATAGGGCCCTGGCCCACACATATCTGTGGCGCACTATGGT
CATGTGCGCCACGGTTGTTCTAGTTACTAGTAAGGCCCTGCCCATAGGTG
AGCCACGCCTCTTTTAGCCGTGGGGCACTTCAACCATGTGAGCCACGGAT
GTGCTGATTACCTATAGCCGTTTTTCTAGTAGTGCAACCCTCTCACCCAG
CTCTGATTTGGCTCCTTCCCCGTCGTGGTCGGCTCCTCTGTCCATATGGC
CAAGTTCTTCCTCAAGATACAGGATGTGGTGTTCACTGACCGTCCCAAGT
TCGCCGTTGGCAAGTACACGACCTACAACTACAAAAACATCACCTGGTCC
CCTTACAACGACTACTAGAGCCAGGCCCACAAGATTTGCCTCACTGAACT
CTTTAGTGCCAAGCGGCTCGAGTCATATGAGTACATACGCAGAGAGGAGG
TGCTTGCCCTCCTCGGTGACCTGCATCGTGGTGCCACCGCGAGCCGTGCC
GTGGTGCTCAAGGACTACATGTCCACGATGAGCCTGAACATGATCACCCG
CATGGTGCTCGGGAGGAAGTACCTGGGAAAGGAGGTGATGTACGAGAGCG
GCACGATGGTCACAACGCTAGAGGAGTTCAAGTGGATGGTTGATGAGCTC
TTCATCCTTAACGGTGTGCTCAACATTGGCGACTCCATCCCGTGGCTCAA
CTGGATGGACCTGCATGGGTATATTAAGAGGATGAAGAAGCTGAGCAAGA
TATTTGACCGGTTCCTAGAAAACATGGTGGAGGAGCACTGTGAGGGTCGC
CGCCATGACGGGGATAGCTTTGTGGCCAAGGACATGGTCGACGTGCTCCT
GCAGTTGGCCAACGTCCCCTGGCTTGAGGTCTGATACGTCCATTTTGCAT
CACTATTTTATATCATAATTTACTGTTATTCATTGATATATTTCATATTT
AGAGATGGTACTTATGTTATTTCATCTATTTTGCATGTTTGATGATTCTT
GGAGATTTAACTGCTGAATTCAGAATTCTACTAGAAAAAGCGCTATCTAG
ATGCAATATTTCCGAAGATCAGGAAATCACAGAAAATATACGGAAATTCC
TATTTTTCCAGAATACGGAGATATCCAGAAGATGGAGTGGAGATGGGCCA
TAGGGGGCCCACACCACCCCTAGGCACGGGTCCCCCTGGTCCACCTCTGG
TGTTGCCCTTTCGTGTATATATTCTCCCAAAATCCTAAGACTCGGGGAGC
CATCACAGAAATATTCCGCCGCCTCTGCGGGGTGAAAACTACAGAGAGAG
AAAGAGCTCTTCGACAGGGAGAAATCTGCCGGGGAAATTCCTTCCCGGAG
AGGGGAGATTATCGCCATCGACACCGTCATCGAGCTAAGCTTCATCAGGA
TCATCATCATCATCATCATCATCACCACCAACACCATCACCACCACGCCA
TACCGTTGTAACAATTGAGTTGAATCTTGCATAGTTCATAGGGGGAACTT
TTCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNGCGTTGATTACTTTTTTTTGACATGGAAATGATCTTTCATTAACC
AGAGTGCTTAGCAGCCTCGCTGGCAACTAAATCAAACATAAAATCTGGGG
CAACATCGGCCCAACCCACACACTCTTCCTCACTATGACCTCCAAACCTA
GCTACAGTGTGATCAACTTTATTACAATCCCTTCGGCAGTGGACAAACTC
CCATGAGGAGAACGAAGTAAAGCACAAGCTTCTAATCTCTCGGAGTAGAA
CACCAATCTCCGACAACTCGTGGCTTTCCGAGTTCAGTGCCTTCACCAGG
GTTTCGGCATCTGATTCGAAGATAACCGAGGACATGCCAAGTGCCAAAGC
ACCCTCCACAGCGGCACGCACGCCTCCGTCTCAGCCTAAAAAGCAGATCG
CAGGTGTCTCAGTTTGCCTACTGCTGCGGCGACGAACTCGCCATCATGAT
CCCTCGCGACAAAGCCCCAAGCCCCACGTTTATCAGGCTCCCAATAGGAG
GAATCCACATTTACTTTGATCATTCCCTCCCGCGGTTTCTTCCATAACGC
CACCGCTGGTGTCGCCGAAACTTGCTCTTGAGAGGTATGCGCGTCGGTAC
CGGTCACCGAACACAGCTGCAATTCCACAACATGTTTATGTATGATGTTG
CACACCCCCGCTGTTGTCCTCTCCAATTCTCCTGTGTTCTGCTTGTTTCG
TGTCATCCACCATTCCCACAGCAGCAAGCATACGAGAGCTCTTTTATTCT
CAGGTAAAGCAAGGATATCCTCCATCATTACACCTGTGTTTGGGGCTTTC
ATGAGTTTCTCCCGAACCTCCTCCAGTTCCATCCCTCTCCAAATCTGCTT
GACTTTTTTGCATTTGAGAAACAAATGGCCACCGTCTTCATCCAGTCTAT
AACACATCGGGCAGCGGGTATCAAGCTCCAGTTTCCTCCGACTGATATTC
ATCCTCGTAGGGTGGCTATTATGGCTAAGGCGCCAAAGAAAAATGCGGAC
CTTAGCAGGCAGTTTTAA

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.