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GrainGenes Sequence Report: AA016671

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Sequence
AA016671
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA016671
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
CAGGTTTTGTGCGCTGTCTCAAGTCTGAAGCGCCGCTGCGGCAGCAAGAC
GCCAAGACCTAATCCGACGAACACAATTACCTGCTCCCCATCTTCTGTGG
CTTCTGTCGGCTCCAGAGAGGAGGTCAGAAGGGCGATGGCGTCGGCACTC
GCGAGGAGGGCGAGAGGCTCCCCGGCGGCAGCGTCGGCGGCGGCGCTGTT
GGCCGCGTCCAGGGGCTTCGCGTCCGTGGGCTCCGACATCGTCTCCGCGG
CGCCCGGCGTGTCGCTGCAGAAGGCGCGGTCCTGGGACGAGGGCGTCGCC
ACCAAGTTCTCCACCACCCCTCTCAAGGACATCTTCCATGTACGCTTCTT
CACTATATACTCCACATGTTTCCTCTTCCCGCAGTCCCGCTACCAACAGT
CTTCTGATTCTTTCGTGTTTCCTTATGTATGATTACAGGGGAAGAAAGTG
GTCATCTTCGGTTTGCCGGTAAGATCTCTCTTCCCTTCCCCAATCCTACC
AAATTCGTTATTGCTGTTAGCTTCGTTTCATGTATGATCGACTAGTGACT
ACGTTAGATCCCTGACAAGTCAGGGCGTTGTCTAGTGCTGATATTTTGAG
TGAATTCTATCACTTCTGAGTTGGAAAATGAATGCTGACCATTATTCCTG
GACTGCCAATTCGTGTGCTTGAGCTGCTTTATAGACTAGCATTTTAGTGT
CCACTATGAGATGTTACTTTTTAACTTCTGGGATTTTGAAGGGAACATCT
CTGATTCTATTGTACTAAACATGTTCTTTAATATCACGTTCCTAGAATAG
AACTATCTGTTTCATCTGTCTTGTCTGATTTGCCAGTACGGTGCAGCAGT
TAATTGAGGAATTGAGGGTAGTCTGGCAACAATGTTGCACAGACTACATG
TTTGGATCCACAGACCACAACCACATGGATATTTAATTGATCTTGAATAA
ATCGGCTCCTTCTTTCAGCCCTCTTGTTAAACCTTCCAGTTGCAAACAAT
GTTTTTGATAATTTTGTATACCTTGGAAATTTATGGCTACAACCATTAGT
ATTATAAACTTGCTTCGATAATAGTATTCTGCATTTTCCATCTCATTGGT
AACTATACTTTTGTAGGCTCACTCTCTCCTGGAATGGTTTATCGGTCATA
TAGTTGACAGCTATCTTTGTGATATATTTCAGGGTGCATATACAGGAGTA
TGCTCGCAGTCACATGTCCCTAGTTACAAGAACAACATTGATAAATTGAA
AGCAAAAGGGATCAACTCTGTTATCTGTGTAGCTGTTAATGATCCATATG
TGCTGAATGGATGGGCAGAAAAGTTACAGGCAAAAGATGCGGTGAGTACC
TACTCTTTCTTTTTATGGCAATGTAGGTTCAACAAAGAATAATGATTGTA
GTGCAGGTATTGTAGTGCATATCAAAGTAGTGTGTACTGACCCATGAGAT
AGGACTATCTGTTTTCATGTTTGGCAGTACCTGTTTGGTTGTCCTCCGCA
ACATGCCACTTCATGTTACTATACTCCCTTTCCCAGTCCACCACAGTAAT
ACTAAATGATCGATAACAGTCAGGCATGAAATTATTATCTCCTATTTTTT
TTGTCCTGTTTCCACTCCTTAGTGTGCCAGTGCTGAGCTGTAGTGTGTGA
ATCGCTTTAAGAGTGCTCATTCTTAACTTTATATCGGGATTTTTCATGAT
GTCTTACAAAACTACCTAGTGCATATTCAACTCACATGATTTTTTGGCTG
AATATATATACGTTGTTCTGAATAACTTTAGTATGGATTTTAAGGCAAAA
AGGGCCAGAAATGTGTTCAAATTGTATGCGTACCAGCCTAGATGGTCAAT
GCAAGTTTGTAACACAGATGTTCCGACTCTTCTAGCCCGTGTTGTTTTAT
GCTATTTATGCTAAACTTTCTCAAGAATCAAGATCGTGCAAACATTTAGT
ATATTTTAACCATCTGCCTTTTTAAATATTATTATCAGATCGAGTTTTAC
GGTGACCTTGATGGGAGTTTCCACAAAAGCTTGGATTTGGAAATAGATCT
CTCCGCTGCTTTGCTTGGCCGTCGCTCCCACAGGTAATTCTATTTTTTTC
CATCTCCTGAATGATTCCTAAACATTAATTAAGGCATGATATAAATATAT
AAGTTATGGTTTGCTGGTTGTCAAGTTTTCATAGGACATGCTTTTGTTTA
CAAAATTTGATATATTATGTGCTGATATTATATAGTTAAATGTGGAACCG
TGCATGCTTAGAAAGGATGTTATCCTATTTCTGTAAGAGCATCTCTAGCA
GACACCGAAAAAACGCTAGACCCAGAAAATTCCGGTGGTTTTTCGGGCTG
GGCCGCGAAATCTGGCCCGAACAGACACCGTAAACATGGACCGACCCGGT
AAATTTTTTCGGGCCCCTAGGAATCGACCCCCTCGACCCATAAAATCCCA
GTTCCGATCTCGATTCCTAGGTCTCGATCCTTTTCTCCGCCACCGCCCCC
TCGACGCCTCCGCCGCGCACCACCGCTCAAATCGCCGAGCACCGGTGAGC
AATTTCTCGTCGGCGATAGCAGATCCGCCCGATCTAGTACGCGATAGACC
GACGGACGAGGAGCGCAGAGGCGAGGAGACCGTTGACGCCGCGCTTCCGT
CGCCTCACCGATGCGGAGGAGGAGCGCCGCCGGTGCGTGCGCTCGGACGG
GGCGAGCTTGCGCGCGCCGCCCTCCACTACACGGGGTTTGGCTTGCCGGT
GTCGGCCGCGCTCCTCCGCCACGAGATGGAGTTCGACGCCCGCATTCGCG
CCCGCCGGGGGAGGAGGGCAGGGGAGCTCCTCATGCACGCCGAGGACTCC
GGCGCCGCCAGTGAAGGAGGAGCTCTCGGAGGGCCGCGTCGTCACAGAGG
CCGATTACGCCCTCGACGACGCCTCCTTCGACCGCTGGGTTGAGGTCATC
CAGCGGCGGAGCATCGCCGAGGCGGAGGCGGAGGCCCGTCGAGCCCAGCG
CGATGAGCTCATCGACGACATCCTCCTCGAGCAGGGGCTCGCCATCAACC
GTGAATCCCGTGGGAAGGAGGTGGAGGCCATTGACCTTGTCTCCGACAGC
AGCTCCGGGCTGTCGGCCTTTGACTTCTCCGACGAGTGAATCCCGCCGCC
GGAAGCGTAGCCGCCGCTCCCTGGGTTCCGGTGAGCCTGATTTTGTGTAC
ATGCTAGGGTAGCGGTGGAGAGCCCCCCCTAAGTATTTGATCGCGTCTTG
TACATATGATCGCGTCTGCTATGTATGAACTATGCTCGCGTTTTGAAATC
TCCTGCGAATGTTCAAAAATCTCGTGTTTACGGTTTGAATTTGTGGTTTT
TGTTCTGGCCATCGTGTTCTTCGAGCAAAAACTAGCTCGAACGCGACCCG
GGAACACGTTTTTCGGTTCATGTTTTTTCGGTGTCTGCTAGAGATGCTCT
AAGCTCGTTTGGCACCAATTCATTTCATTTATATTGTCATTTCAAAAACA
TCCACATGTTTGGCTGCCATCGGAATTTGGAAATGACTATGGAATTCAAA
ATGAAATTTCAAAATAGTTGCCATGTACTAGAATAAAAACACATGCATCA
AGTGATTGCAACAGTACATTTCATAACTTTTGGACCTCAAAACACACATC
TTTCAAGTTCAAAAATTCTAGTCCATGTTCAGTCCATAAAACATAGATGC
ATCGACATAATAAATACAGATTCTAGAGTTCGAATAAGTTAAACGAGATG
AAATGGCAAACTGCTACAACACAAAGGAAGATTTGAATCGTGCGTTTATC
TGCTTGAGCACCCACTTCTTTATCCGTATAGGCAGTGCCACCAAAGACTT
GAACTTGCGATCATCGGCTACAAGAACATCATATATTGACAACTGTTAAT
CATTTTCTAGATCTGGTATGCCATCAAGAACAGCCCAGATTTCCTCAGGA
GATGCTGACTTTGGTGGAGGCTCGGGAGCATCAGCTTTGAACGCAGCACT
GAAGTTATCTAACTTATCACTAAGCATGGTTGCAATTGAGTCATCCGATC
GATACCTCTTCTTCGGATCATCTTCATCAGCTTGAGTTGATGAATTGGCA
TCTTTATTGTTGGCAGTGGTGTTAGCATTCTCCTCCGCCATTTCAGCTGC
GCTTTCATTAGATGTCCTTGCACCCGCGCCGGTAGCACGGTCTCTAGAGT
ATAGTGTGCTAATCATGTCCCAGAATTTGATTGACTTATACCTATATGAA
GCGGCATCTTTGTTGGCCTGCAAATAAATCACAGGAAAGCAACACGGTTC
AACATAGAAAGCATCCTAATTTAAATGTGTAATTGTTCAGACAAGAAAAG
TTTACTGATGTATGTTCTCAAACGATTAGTCGATTACAATCATGCATGAT
GCACATAGTAGAGCTGACTCCTTAATTAAGGAAAGCATCCTAGGAAAAGC
AACATTATAAACAAGGCATACTATATAAATCAACGAGACATATTGTGCAG
ATACAAATCAATGTGATATGCAAGGAAAATATCCTTGGAAAAGCAACCGA
AGTAGTTTTTGACCAACCTGACAGGCATATCCTCATAGAGATAAAGTACA
AAAAGAAAAGGCCATAGACATGCAAAATCACGCCTAAGCGATGAACCTGA
ATGTACAATTTGGATGGGTACGTCTCTCATGTCATCCAAACATGGTAGAT
TAGTACTATAGTTAACTGTTCCTTCAGTAAACATAATAGCCCTGAACTTA
TACTTTGATCAAGCTAATTTCATACATGTATGCGTACGTCTCTCATGTCA
ACCATATTAGATTAGTACTGTAGTTAACTGTTCCAGGTTATAGCCTATAA
AGATAGACAATGCTGCAGTGTACATATAACAAAGTCAAATAGTCGTTTGG
GTTGGGTTTGAGTCAAATAGCCATCTGTTACCGATCAATAATGAATGGAA
CTGATAATATTTAAGTATCGGTGCATAGATCAGCATCAACCATATATACT
TTAAATCACATGATGTGCTTTTCACTCGCTGTAAAAATTCCCAAATATAA
GCCTCTCTGATCTAGAAAAGAAATGGTTCAATCGATCACTTCATCCATGG
GCTACAGAAAATTATTTGAGCCAACAGGGTACACACAAGTAGCATCTACT
TAAAAGCAACATCTAGGAATATACAGAAAGCATCCATGTATAGTAAGGAA
TATACAGAAAGTATGCAAATAGCAGTACTAAGCACAAGTAGGTTACCTTG
ACATAAGTGTTCCAAACATCATCTTCCACAGTGACCATATTCTTCTCGTC
ATCCCAACCAAATCCACTCTGAGAAAGCATCTTGTTGACGATAGCATAAC
GTTTGTCAAAAGTCTTGCTCCTAGAGATGATATTATCCTTTGTGAGCTCA
ATCTCATCTTCCTGATCTTCTTTGTGGGAAAGAAGGAAGTCGAGGACCAA
CATTTGCATTGTCATGGTTGTCATCTTCCTGATCTTCAGTCTCAATTGTA
TGTTGTTGACCCTTGACAACATATCCAAATGCTGACATCTTCTCGAACAC
ACCAATGTTTTTGCCCGGTCCAAAAACCAGTCCATCTGCTTGTGCTGCCA
TGAGTTGATCATAACAACCGCTGTTTTCATGGAGCAATATCTCCCGCTGC
TGCAGTATAAGACCTTTTCCAAGAGAAGTCCCATCAACCTCGGAGAAAAG
ATCCAGCCTTTGGCACTTGATCAAACGGAGAAGGAAGTGACTGCAGCGCT
GTGGCTTCCCGATCAACACATCCCACCTCAGAAATTCTTAGACAAACCAG
CCCTAGTCCACCGCGTACGTCTTCCCATCCTCCAGCAGCTGCAAGGACGT
GACGATCTCCTCCGGCAACACCTGGCCACCCCCTGTTCTTGCAGCTGCGA
CTTCACGTCCTTGCAGCTGTTGGAGGATGGGAAGGCGTACGCGGTGGATT
GGGGCTGGTTTGTCTGGGAATTTCTGAGGTGAGATGTGTTGATCGGGAAG
CCACGACGCTGCAGTCACCTCCTTCTCCGTTTGATCAAGTGCCAAAGGCC
GGATCTTTTCTCCGAGGTTGATGAGACTTCTCTTGGAAAAGGCCTTATAC
TGCAGCAGCGGGAGACATTCCTCCATGGAAACATCGGCTGTTATGATCAA
CTCATGGCAGCACAAGCAGATGAACTGGTTTTTGAACTAGGCAAAAACAT
TGGTGTGTTGGAGAAGATGCCAGCATTTGGATATGTTGTCAAGGGCAAAG
TTGTCAGAATCGTGATTCTGAATCGGATCGAAACCTCTATGGTAGGATCG
TAGATCGTAGGATCATAACTTTTAGAATCGTAGAATCGATCCACTCAATT
TGGGTCGTAAAGTCATAGATTCGCATGGTAGAATCACGATTCTGACAACT
TTGGTCAAGGGTCAACAACATATAATTGAGACTGAAGATCAGGAAGATGA
CAACCATGGCAATGCAAATGTTGGTCCTCAACTTCCTTCTTTCCCACAAA
GAAGATCAGGAAGATGAGATTGAGCTCACAAAATTAGATGGTACCTAATT
TTTTATTCCAAAAAATGAACTAACCGTGAGAAGTAGCCCATCTCATCTTT
AAAAGATCCCAAATCCTCTCAACTACGTTTCTAGCAATTGCATGCCGCAG
GTTATAGAGCTCTTGTGGGCTCTTGTGGAGTTTCTGGATTATTCCCATTG
GCAGCCCACTCTTTCAAGTGATACCTTGTATTTCTGAATGGAGCAAAGAA
GCCTGGACCATTTGTGTATTCAGCATCTACTAGGTAGTATTTTCCTAAGG
TTTATGAAAATAGCCCACATTAGATTTCAGTTGAGAAATTTAGTGGCAAG
TTGTATCATACTAAGATAGGAGTTACCATTTGGAACTTTGAAAGAGTCTT
CTCTAAACATTGCATCTCTCAACACTCTGCCATCTGATGCTGAACCTTCC
CAGCCAGCCAACACATAAACAAACTTCATGTTGCGGTCACAAACACCCAA
CACATTTGTTGTTATGGCTTTCTTCCTATTCCTATATCTACCTTGCTTGT
GTAGCGGAACCCGGACATTAACATGTGAGCCATCTAAAGCTCCAAGCCCA
TCGGGAAACCACTTCCATTTGTAATCTTTGGGTAGTTCAGTAGAAGGGTC
TGACAACTTGATGATTTCATGAGATAAAGAAAGAATGGCTCCTAACACCT
CATTAAAATGTCTATTAATTGGCTCAAGTGTCAACCTATAGGTGCTACGG
ATCAACCTAAACTTCATGCCATGGCTAAGAACAAGCAGTACAATGGTCAC
AGCTTCTTCAACAGTCACATAAAAGGTGTCTTTCAATCCAGCCCTTTCAC
GTAAAATGGCACATAGGTCAAAGAATGACTTTTTGGTAAACCGTAGAGTA
TCATAGCAATATAAATTTGGACCCATATAAATATTCCTTAGCATCTGTCT
CCTAATTCTAATCTCTTCCTCTTCCTTACTGAAATCACCAAGCTCAACTA
TCCTTCTCCTACAACACATATGCTGTGCTACCGCAACTATAGTAACAAAA
AAACCAGCTGCTGCCCTCTTTCTTTTCTTCCTCCTCTCATGATATAGTAC
TACTTGTTGATCAGCCATCTACAAGAGATACAGCATGGGGAACTGAGTAG
AGTAATAAACTATCATGCAAAGATATAACCACTTGATGTGAAGCAACCAA
GATATAACCACTTAGTATGATACAACCAAGATATAACCAAGCAACCAAGA
TATAACCACTTGATGTGAACTGAGTAGAGTAATAAACTGAGCAAAGATAT
AACCAGTTGATGTAATATAACCCGCCGTAGAGCACTAACACGAGTGATAC
ATACACAAAACGAACGACTAATTAACCGGTGAGAAATATACAGATATACT
AATTATTTATAATATACATACACTAATTATTTATAATATACAGGTCCAGC
TTATAGATAGAATGTTACCTGTAGTGCTACACCCTTGATATACAGGTATA
CTACTACAACGAAATGAAATTCTGAAGTAAAGAGTGACATATAGAACCTT
CCAACCATATGTACATGTAAAGAAAGCCAGGGAAAACTGCAACTGACCAA
AGCAAAAACAAGGGGAGTGGGGCAAAATAGAGCAGAATTATGTGCTGACT
AATCAAGGATGTGTCACCACTCACTACTGCCAGCTAAAACCTAAAATACG
GCTCAACATAAATTTTAGTGGGAGAAATAGCTTGTTAGTGCTGGAATGGA
AGTACAAGGAAACCAGTGAAACCAGAATAAGCTATAGTCTGGTAACTAAT
AGGATAGCAACAGGCAAATAGCAGTACTACAAATAATTGAAGGACACTAA
TAAACAAACAGGTCATATCCACACTTTTGTGGTGCCATAGTCATCATGAA
AGGCACATCTTGCGAAGATTTAACACACAGACAAGAGGACCGTGACCTGT
AATTTGTCTATCACAGATTATCGTTCCAATCAGGGGATATACTATTCAAC
TACGTCAACATGAGCAGGAAGGCTAAAAACCAACAAGTCCACTTGGTTTC
TTCAACATGAAAGGAAGCACAGTCTCCTTGAGCAAATTTGAGGCTCCAAT
TCCTGTACTTTTAGCTTGACACTTTGCTGATACCTAAATGCTCAACTTGC
TCTCCCTATAAAACCTTATGCTGAAAGATAGCATGGCCCATCTAAATGCT
ATGCCGAAAGGTTGCAAAGCCAAAGCATGTGTAGCTCAAATTCTCAGTAG
TTGTACTCGAGTCATCTTATTTAAAACAGGAGCAGAGCCAAGTTTAAGGT
AACTCAGTCAAGATCGATTCCTTACAGAGCAGAGCCAAGTTTAGGGTTAG
GGTTCAATTACATGGGAAGATCAAGTGAGAGAGAGAGAGAGAGAGAGCAA
AACAGGAGAGACGGAGGGGAACTTGCCTGCGGTGGAGGAGAATGACTGAG
GTCGTCGGCCGCTTACTGGCGGCTGTTCGTCATCAGGCAGACAGGAAGAT
GGGGTCGGGGAGGAAGGCGGCAATGCGGTGGGAGGAGGCGGCGAGGTGGA
GGGAGGAGGAGGCGGCGAGGCAGACAGAGGAGGAGGCGGCGAGAGGGAGG
GAGGAGGAGGCGGCGCTGAGACGGGAGGGAGGAGGCGCTGCAAGGTCGGG
AGAGATTGGCAAATGACGGGTCTCAGATCAGAATCGGGTTTACACATGCC
GTCATTTTGGTGGAATTGCCAAATGAAATGACTGCGTGCCAACCAAGCAA
TATAAGGATGGAATTCCAAAATGAATTCCGGGATTCCAGGCCCAAATGAT
GGATACCAAACGGCCTCTAAGTCATTTTTCAGCATTTTGTAGCTTGCCTT
AAGCTTCTAGATTGACTTTGCCAGTTTTCTCTTGTCGTGTTTGTCCCAAA
TTAACAATAGTGATCACCAATTTATCTAGGGGGAAAGATAGATTATGATT
TCTTGATGATTGGCTTGTCTCATCATGACGCAATTGTTAGTTTTCTCTTG
TTCGACACTGTTGAACTGCCACGACTGTAAAACCCAATGAAAAATCATGC
ATGAGTGCGGGTGCCAAGAAATACTACATAAGAACCAGGACTTTCTATAT
TCCCATGAATTGTGCTGTAACTCTGAGAAATTGGTTGCGTTTGAGTGAAG
GCCTGACTCCCTTAGGTGTTTCACCCATTTTTTGGTGTACAATCAGTAGA
CTCCAAATAGCTATTTCATTGACTCGTACACGTGATTAGGCGGGGACAGG
ATTCGAACCTGCAGTCTTCAGGTCATGAGCCTGATGAGTTGACCAATTCC
TCTACCCCGCTTCTTCCCCTGATCTTTCTTTCCCGGATAGAACCAGCGTT
TAAACACGCTATATCTGTATTATATTGCAAATAAAGAAGAAGTTGGCAAG
TTGCATAATGGATAAGTGCAGAGGTTTATATTATAAGTCTTTTTTTGGTG
AACTTGAACATACTTCAGGAGAGGTCCAGCTGTTTGACCTCTCCGTGGTG
AGACTTTTTTGCTGAAGTTGCTTATCCACAATGTGTGGAGATATCTTGGT
TTCCTCAAATGCTACTAAGAGCACTCTACTTACTCGCAATCTGGCCAATA
TTGTGCGCTTTCACCAGACCTGAAATGCTACCCCATCTTTGAACTCATGC
TATGGTGATTACTACTTTAAGAATGCACCTTGTCTAATTTCTCAGCATTC
ACCGTTGTTAGGTGGTCAGCCTTCGTCGACGACGGGAAGATCAAGGCCTT
CAATGTTGAGAAAGCCCCTTCTGAATTCAAGGTTTCTGGTGCCGAGGTGA
TCTTGGATCAAATCTGAGCCAGCCGGTGATACCTTCCCTTGTTTGGCTTG
CCTATGCAGCAGCAGCATAGAAGATACACGATTTGGTGCACCGAATAAAT
GAGAACTCGA

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.