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GrainGenes Sequence Report: AA029070

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Sequence
AA029070
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA029070
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
CCGCGGATGGTGATCGCTAAGCATCTGCATCTGCATATATTCAAACTCTC
GCATCCTAACCATCACATCTCTTGTAAGTCGTCGGCAATTGATTAGCGCA
GCACACATGGCCGCAAGCAACGGCCGCGCGCTTCCCGTGGTGGACCTCGC
GCCGTTCTTCGTCGACGAGGGCGGCCTCGCCAGGGGCCGCGCCACCGAGG
CGGTGCGCGAGGCGTGCATGTCGTCCGGGTTCTTCCGCGTCGTCAACCAC
GGCGTGCCGAGCGAGCTCATGGCGCGCTCCCTCGAGCTGTCGGCGGCGTT
CTTCGCGCTCCCGGACGAGGAGAAGGCCAAGGTCCGGACCGCCGGGGGCT
CCTCCCCCCTCCCAGCAGGCTACGCGCGGCAGCCCGTGCACGCCGTCGAC
AAGAACGAGACCCTGCTTGTCCTCCATCCGAAGCCCTGGCTCGACTTGTA
CCCCGCCGAGCCTGCCGGATTCAGGTCAGCATTTGCAGTTTAACGCCTGT
AGTTTGGAGTTTCGGCTGATTTGGTTGAAGGTGCGGCGAGGAGCCGAACA
GTGCTGCCCAGGCTAGCTTCAAGGGTTGACCGATGCAGATGGTGTTGGAG
TAGAGCACTAGAGCAATCTTTTATCACGAGAGAATATATATTCGATGCTT
GTTTAGATGGTCGCCAATCAGCCCGTACCGCTCGAGCACACGATTAGCCA
TATAGATATATTGAGCAAAGGAAATTGAGATAGGAAAAGAACATTTCCAG
GACTAGTTTTCGTTGATAAAAAAAATACCGCATATGTATATATAATACGA
GTCGCGCTATTTGATCCTATAGTTATTCTGCAACCACCCTCTATCTTTGT
AACCATCCATAATTTTTACGTTATGTAAATTTTTTCATAAGAAAAATAAA
AACATGTCATACAAAATTAATTTACATGTCATATAAAAATGTGACGTAAA
ATACTTTATTTTGTGTTTTTTAACACTATAATGACTCATGCGCTATATTA
TTTTATGTCAATTTTTTTGTTGTGGACTAATACAAACATAATTATTTGTA
TACAGAACATAAATTTCTGATTTTAATAATATAAAAATATGATGGATGCA
AAATAATTTTTCTACACACTAGATGCAGAATAGGGTTCTATATACAATAC
CAAATATACATGATATAATAGTATATTGTATTATGATTCTAATAAGTTTT
ATTTCATTTTATAAATATTACTCCCTTGGATCCATATTACTTGTCGTTAA
AATGGATGTATCTAGCACTAAAACATGCCTAGATACCTCTATTTTAATGA
GAAGTAATATGGATCGAAGGAAGTACTCGTTTTATGTTCACAATTGGTAA
GATTACAAAGTCTAACTTTGGACAAACGTTATGTACGAAAAAATATGAAA
CACCTGCATGACATCCAAAGCACACTTGTGGTCTATTAGCGGTAGATCTT
AACGGTAAAATAATTGAGCCTATCACCTCTACTGCAGACTAGGCATAGCA
TGACCCCGTGGCTACATCTACGAACAAGATGTACTACAAAACATTTTTAT
GGGTAGGTTTGAAAACGGAACGGAAATGGATGAAAGCATGTGTCATCGTT
TTTGTTTGTGTCGTCGGATCGAAAAGGAAACGGAAAACTCCGAAAGCAAA
CATAGAATTGGAAATCATCGGAGACGTATATGGAATTGATAAGAGACGGA
TGCGATACGAAAACAAATATTTGTCGAAATATAATAGTGGCATAATATTA
TGGTCTATACATCTAAAGAAACATACAATAGATAAATAATAGCTCACAAC
ATCGAAAAACGACAATTGAATATAAAGTAATACACATAATTCAACTTTTC
AATAAGCACATAAGTTCATATAAATAGTTTCACATAAACGCGAAGACACT
CATTTGATTAGTATATAGGCTAGGTCGGTTGCATGTATATTACTCAAACC
CTGCATATATACTATGACCCCACAAGAGTAAGAGAAATCACTGACGCAAA
GTACTATTTTGTACATGGGCCTGGCTCGTTATATTTTCAGAAAGTTTTCA
TATTTGATTATCCGGAATTTTCTTACCGTTTTCGTTTCCACACGAAATGG
CTCCCTCGTTTCTTTTCCGTTTTCATTAAGAATATTCTGTTTCCGTCCCT
TTCTCGCAAAATGCCATTTCTGTTTTCTCTTAACTCTATGTTTCCTTTTT
CTCAGGAAACAGATGAAAAGTTTCTTTACCGTTTTTAATCATACTTACGG
ACACCCTACGTGGCACAGCAGAAAAGTAGACCGATCCGTAGATGCTCCGA
AATTTAAGGAAAATGATTCCACTCCCCCGGGGGATACCATGTTTCCATCC
CCTGGGTCCATTTTTTTTCTGTGTCCCGCGTGCGTGCGTGAAGCGGGCAT
GTCCTACCCACTCTACGTCTCTTCTCCAGGAAACCGCCAGGAAACCGCCG
CCTCCATGGATATTCGTATCGAGCACCGCCGCCGGCAAGGCCCCCTCCAC
GAGCCACCGGATCTTCGCCGCCACCCACTCCCTTCACGCCGCCGGCCTCC
CATCTCCAACTACGGCGTACACAGCCCCCCACTACTAGGAAACTAGCTAT
AGATAGACATACCTTCTGTGGCGCATGGTTCTGACCATGCGCCACAAAAG
TTGTCCAGTGGCGCATTTCATCAAATGCGCCACAGAAGTCTTCCAACTTT
TGTGGCGCATATAGTAAAAATACGCCACGGAAATTGGAACTTCTGTGGCG
CATATGGACATATGCGCCACGGAAATCTCGGGTGGACCCTACCACAGAAT
TCTTTGACTGTACTCTGACCAACATTCTGTGGCGCATATGACCATATAAG
TTTCTGTAGGAAAAACAGATTCTATCCCCCTCCCCCCGCGTGAATCGCCT
TTTTAGCCTTTCACATAGAAAATGAAAAACACTTAAAAAAATAAAATCCT
TTCACATAGTGATAGGTAATATGGTCTAGTTTGTTGAAAAATTAACAAAC
ATGCATTTCGACTTTTTATTAAAAAAAAGTTTATGTCACGGTAAAACGGC
CATAACTTTTTCATACGATGTCGAAAAAATACGTATAATATACTAAAATG
ACGAGAACGAGATTTCGGAAGGGATTTCGCATATGGTCGTTTAGCGATTA
TTTAGATTTTCAAAATTCGAAAAGAGTAAAAAGTTATGGCCAAAAGATCG
TTTTTTCCTGCAAAAAAATAAAAAAGGAGGACAAACTTCTGTGGCGCATT
TCTTCCCTATGCGCCACAGAAGTTTTGGGAGGGATTCGAATTTTGAATCC
CTTCCCCCTTCTCACTCTCTTATTGAAGGGAATATGCCCGAGAGGCAATA
ATAAAGTGGTTATTATCGTATTCCTTATTTATGATAAATGTTTATTTTAC
ATGCTATAATTGTATTAATACGGAAACATTAATACATGTGTGTTTAATAA
ACAAAAAGGAAGTTCCTAATTATGCCTCTCTTATAAACTAGCTCGTTGAT
TAACATGATGATCAAAGTTTCCTGATCATGGACATTGGATGTTGTTAATA
ACGAGATCACAACATTAGTGTAATGATGTGATGAACATTCAACCGAAGTA
TAACATTACGATCAAAGTCATTGAGTTTATATTGCTATAACAACTTACGA
AATGATCCTAATCCTTAGACCATGAGATCATGTCAATCACTAACACCGGA
AGAGTTTCTCGATGACATCAAACGTCACACCGTAACTGGGTGATTATAAA
GATGGCTTCAGAACTACTAAAGTGTTATGTTGAGACCCATGGATCAAGAG
TGGAATTTTTTCATCCCGATGACGGATAGATATACTCTGGGCCCTCTCGG
TGATATCACATTGGTTAGCTTGCAAGCAAGTGATTTGATCACTAGAATGT
TATATCACGGAAACGAGAAAAGAGTGCATGTCGGTAACGAGATCAAACTA
GGTATGGAGATACCGATGATCGAATCTCGGACATGTAATATATCGTGAAA
CAAAGGGATTAAGATACTAGCGTAAAAGGTTCACACGATCACAGAAGTCA
TCGTTGAATGTGTGGGAGTCAGTATGGATCTCTAGGTCCCGCTACTGATT
ATTGATCGGAGAAGGGTCTCGATCATGTCCGCATTATTCGCGAGCCTTAG
GGTGACACACTTAAGGGATACCGACACCATTTGGAGCAAATGATATGCCA
GAAAAAGAAAAGGAAAGTGTAGGAATTTATTTCACTAGACACCGAAACTG
TTTCGGTTGAAATTGCTGAAACTGGTTCTGCATGTGAAATTGAAATGTTG
TAAGGGGTTTTATGTGAATGTTTGTTAATTAAAGTAATTAACAAAATTCT
GAATAAATAAATAAAAGAGTTTTATTTAAACGAGAGCTTGCATTAAATTT
GGTGGAAATTTAATGCATGTGAGTGGATTTTTGAGTGGAGGCTTTTTAAT
GGGAGTGGAGGCTTTTCATTTTGAGTGGAAGCTCCACCCACATGAATGTG
GAAGAGGTGGGGGCAGCCCCATGGCTGGACACCATGCCCCATGGGTGCCC
CCTCTCTCCCCTATAAAACGCCCCCCTATCCTCCTCTCAAAGCACACCTC
CTCGTGAAGGATCTCTCTCACCCCTTTAGAATTTCCCCATGGTCTCGGAT
CAGCGAGATACATGTTCCGGTGGCTTTTTCTGGAAGGATTTGTTGCTTCC
GCTGCTTCGCTGGAGTGAGGGCGCGAAGGTTGTCAGGATACCCGTACGTG
TGTGCGATCATGGATGCACCACTGCTTTGAGGTGCTGGACTTGATCGTGC
TGGACCGGCTGGACCAGATGGACTTCATCACGATCTTGAGATCGGCAAGC
GTTCGTCTACATCATCCATGAGTACAACCTCGTTAACTCTATTCGGTCTT
CGAGGGTATGTATTCTATGGATGTATATCCACCTGTTGCTTCTATCTAGT
AGATAGATCTTGGTACTTAGTTGTTCCCATCGTAGAATTTTTTTTGTTTT
CTATGCTGCGAACCCTACACTTATACTCTTCCACTCCTACATCCTCCTTC
TTATCCTCCACTTCTTCTCTCATTCTCCTCACCTTCTCCTCCTCCTCCTC
CTCCTCTCCTTCTCCTCCACCCCGGTGAGCTTCTCCTCCTCCTCCTCCTC
GACCACCACCGCCCCGGTGAGCTCCTCCCTCCTCCACCCCGGTGAGCTCC
TCCTCCACCCCGGCGAGCTCCTCCTCCGGCGACCTTCTCCTCCTCCTCCT
CCTCCTCCTCCTCCTTCGGTGGCCTCCTCCAATCCTCCACCGGCGACCTC
ATCCACCAGCGACCTCCTTCTCTCCTCCATCGGCGACCCCCACCTCCGGC
GAGCACCACCTCCGGCGAGAACCACCTTCGGCCAGATCAGGCCGGTGTTT
TTTTTTTGAATTTTGAAAAAAACTTCTGTGGCGCATATTGGCCAAATGCG
CCACAGAAGTTTGAGATATGGTTTGGGACTTCTGTGGCGCATTTTGGCCA
TATGCGCCACAGAAGTTTTTCACACTTCTGTGGCGCATTTCAATATGCGC
CACAGAACTGAACTTTAGTGGCGAGATAACAGTGGCGTATCCCATATGCG
CCACACAAGTCCCAAAATGGTGCGCCACTGATGGGCCTTTTCCTAGTAGT
GCCCGCTACTACCTCCATTAGAGCTCCCCGTCATCGGCCACCACCTCCAT
GGGAGCGGCCGCGCTGACCCATGTACGGCCTCCCCTTGGCCTCCACCTCG
CAATTGCCTTGCCGCCGGCCCCATCTCCTATGAGCCCCAACTCCACCCGA
ATCGTGCAGTCCGGTGTCAATGACGATGGGGATCACCTTCGGCTGGGCCT
TGCCTAACGAGACGTCCTTCCCGGTCCTTCATCACAGCTCTCGTCGCTAG
CAGTGGCGGTTCTGCGAGGGCAACCCGGCGCTGCTGCTAGGCTCCACCTC
CGGCTTCGTGGTCATCGTTTTGCAGTGGAGCCACGACACGGTGCTACATA
GATAGGAAGACAATGCTACTGGAAGTGGTCATCGTTGCTGCATATGAAGA
GTCGTGATGCTACCGGCCAATAAATGTTTTTGATATTTTTGCTACAGGTT
AATGCTACAATAGTAGCAAGTTTTTTCTATTTCTCTTCTATGCTTTTGCT
ACAATAGCACAAAGTATTTGCTACGACATTTTCGGTTTTGCTACATCCAA
TCTCTACAGTTGTGCTACGAGATCTCCGGCGAGGAATATCCGATGATGTC
GCTTTTGCTATATTAGAAAAAATATTTTCCTACAACCGTTTTGTGGTTTT
GCTACAATAGCGCAAAAAATTTCGCTACAAGGTCTCCGGCGAGATCTCCG
GCGAAATTCTCCGGTGAGGTCTCCGGCGAGTCTCCGATGAGGTCGGTTTT
GCTACATTAGTATTTTTTTTTGCTACACGGTCGCCGGCGAGATCTCCGGC
GAAACCTCCGGCGAGGTTAGTCTATTTTTTTATTTTTATGACGAACCGTT
TTCTGCTATAGTGTAGTAAAAGCGGGGTATTATGTAGCAAAAGCGGGTTT
GAGTGTAGCAAAAACGGAATTTGGGTGGACACGTGTCAGCAGGAGGACCC
GGAGGATTTTGGGGAAATATCCCCGGGGGACGCGTAGTACGACCCGAAAT
TTAAGCAACGAAAAAATCTGCACAAACCTTCTTCCTACACGTCCGTTACA
ATCTTTCTCTAAGTCTAATCTAGCTTTATTTTTTGCAAAAAGTTTAGCAG
TCTATTGTTAATTATCGATGGTAGCACAAAGAGTCTAAAAATATATCACT
TAGCAACGACTACATACACATTAGCGCGAGCCAAAAACTACCACCGTCCT
TGCCCCTCATCACCAGAGTCGGATAAAACTTGTAATAATAGAGTTTGTTG
CAGTAAACATAAAAAAAAAATTGTGCTAAGACCCAAGAAACCAGCGCAAA
CATGGGTGAAGCCAGCGGATTAGTGCATTGGGGTCACCTGACATCAACGG
TGTCATCCTATAATTATCAGCAGTACTAAATAATGGTGATGTCATCTCAC
TTACATAACTTAAAAATCTTGGTTGCCATCTCAGTTGTAACAAAAGAAAG
TCAGTTGCAACTCCATTTGTAATTGAAAAATTTTAGTTATAACGTTAGAT
GCAACTAAAAAAATTGCAGTTTCAATTCCACTTGTAAATCATAGGACACA
CAAATCACGATGTAAATTTCATGGTTATAGAGTTGAATGCGACCTAATTA
ATTCTTGATCGACTGAGAATTAGCAAAACAGATAATTTATGGCTATGCGG
ATCAACCAATGCTAGCTAACCCCGCGGTGGAGCTAGGATGGCCGAGGCGA
GCGTGTCATAGGTCGACACCGGCTGAGAGGGCGAGTGGACTGCTGCCGAT
GGTGGAGGATGACCAAACAGGGTACAAATCGCCGGAGCTGTCACTACGGT
GGAAAAGCATCCGAGTACGACCATCCTTAACAGAAAAAACCAGAGACGTC
AAATTCCACAGAAACATTATTGTCGCGAGCAAGTGAACGAACAGAAACAA
GATTTTGGATTAACTGAGGAGAAACAATGACATTATTGAGAGAAAGAGGG
GTGGAGGTAGAGGGAAAATAGGCGGAGCCAGTGTGAGTAATAGGAAGAGC
ATAACCGTTGCCGACGATTATGCGGGAGGAAGTGGAGGCGGGAGTGGAAT
TAGAGAGGTTACCGGGGTGGACGGCCATGTGCGCGGAGGCTCCGGTGTCC
ATGAACCAGTCCCCGCCACCGCCATACGCGCCCGCCGTGGAGGCGGACTG
GAGGCGGTCAGCCAGGCGGGGTCCCACTGGGCCGTGCTCGGGGGCGCAGC
GTAGTAGGCGGGAGGGGCAGGGGCGCGGCGTAACCGGGCGCGACGGCGGG
CTGGGGTGCCGCGGCGTAGAGCGCCTGGTGCAGGGTCGGGCGCCCGAGTA
TGGGGCACGCGGCACGGGCATGGTGTAGGCGTGGACGACCCCGGTCCAGG
GGTTATGACCGGCGATCCATGGCGGCGTAGGGGCGATCTGCTGCGATGGA
CGAGGCGTGGTGGTGGTGTCACCGGCATGGCCACCACCATTGTCGCCACC
GTTGCGACGTCGACGACCGTTACGTCCTCTGTTGCCACCACCGTGGGGAG
GTGGTATGGGTGCGAGCGGCGGGGGCGAGTAGAAGCCCGGGGGAGGACCC
AAGGCGCGCGGGGCAGGGGTCGGGGCGCGGGGGCAGGTCCACCCTGGGAG
TAGCCGGCGACGAAGGCGGTGTGGGCCGCCCGAGCCCAAAGGTGCTTGAT
CCGGCGCTCCTCGAGACAGAGATAGGCCACTGCCTGCTCAAACGTCGGCG
TGGTGAGGAGCGTGAGGTTGGAGGCGGCGTTGCTAAGGTCCTCCCCGAGG
CCGGCCGACATCATGGAGAGCATGATCTTGTCATCGATCGGGAACTCCAA
GTCGCGAAGCTCGTCGGAGAGGCTCTTGAGACGGAGGCAGTAGTCGTCGA
GGGAGAGGTCGTTCTTGTGGGTGCCGAAGAACTCCTGTTGGAGGAACGTG
ACGCGCTGGATCTTGTTGTCGGTGAAGAGGCCGGTGATCTTGGTCCATAC
GGTGTGCGCGGAGTCGCCCTCGCGGATGAAGGTGCGGAAAATCTCGTTGG
AGACGGTCTGGAAAACCAGAGGATGATGGTCGCGTCGATGGCCAACCAGT
CGGGGTCGTGCGGCATGGCGAGGAGGTCGATGGTGTCGTCGACATGATCG
AGGAGATCATACTCGAGGAAGAGGAGGCCGAAGTACGTCTTCCACGGGAA
GAAGTTTGCAGCGGTGTGAGAGAGCTTCACCGGCACGCGCTCGAGGATGG
GGACGTCGTGGATGACGGCGACGGAGGGGCCGGCGAAGGGGTTGCTGCTC
CCGAAGACGGTGTCACTGAAGGGGTTTCCAGAGTACGGGGAGTTGGGATC
GGCCATGACGGCGTCAAGGGCGGAAGCTGTAGTGGTGGGGCGGGGCAGAA
GCGGTGAAGGGGAGGAGGGGCCGGCGGCGCACTAGGAGGCGGCGGCTGGA
GAGGAGAGGGAGGAGGCCGACGACGCTTGGGGAGGCGGCGGCTAGGGTTT
GGGGAGGAGGGGCCGGCGGCACCAGGGAGGAGGCGACGGCTAGGGTAGGA
GGACCGGAGGAACCTCTGATACCATGTAGAATAGTATGGGATAATGCACA
GGCCAATAGGGCCGGCTGCTCTCATTACAGGTATATATATAGACACAATT
ACAGGTATAACCCTAAAATATACGGAGACCTATATCTATACAATATATAT
CTCAACACAATCAAGAAGAAGAAAAAAACAAGGCCGCGTCACCTGTATGT
GAATTTTCTTATTGTTTGTGGAACTGAATAAAGAAGCTCCTCTCATGCAT
CCTTAGGGAGGCGCTAGTGGAGTGCCACGCCAAGCTCACCGACCTGGGGC
TCCTCATCCAGGAGATCCTGAACGAGTGCCTGGGCCTGCCACGAGGCTTC
CTCGGCGAGTACAACGACGACCGTGGCTTCGACTTCATCTCGGCGCGGCA
CTACTTCCCGGCGACAGAGGAGGGGAGCAGCGGCACCTACGCACACCAGG
ACGCCAACATCATCACCTTCGTCCTGCAGGACCAAGTCGGGGGCCTGGAG
GGCCTCGGGCCCCAAGGGGACTGGGCCCCTGTAGAGCCCTTGGAGGACAG
CATCATCGTCAACATCGGCGACGCCATGCAGGTGCTAAGCAACGCCAAGT
TCAGGAGCGTCATGCACCGGGTGGTGAGGAAGCCGTCGGTGCACCGGTAC
TCGCTCGTCTTCTTCTTCAACGTCCACGGCGAGAAATGGGTGGAGCCGCT
GGCTCAGTTCGCGGGCGACGTCGGGGAACCGCCGCGGTACAGGGGGTTCC
GGTACAGCGAGTACGTCAAGCTGAGGATGAGGAACAAGACCCACCCGCCG
TCCAGGCCTGAGGACGCCTTCGACATCGACCATTATGCAATCTAGCTCGA
TCGTGGAAGCTGACTTCCATTAACTTTCAGTTCGTCTGCGATGGTGCTCA
GCGCGCAAGGCAGCCAGTTTGAATAGTACTGGATCATTCAAAATTATGAT
AAACAAATTTGGACGGACCAGTTACATAATAAGTACGCACAACTTTTGTA
TTATTATCATTGGACTTCTTTTCAAAATGTG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.