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GrainGenes Sequence Report: AA039647

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Sequence
AA039647
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA039647
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
AGGAGCAATGATGTTGCATTTAAATCCAGATTTGAAAGCTCAAACCGGTG
GGCATGATTTTGCACGTAAAGTCCTTCAAATCATATGCACAAGGCGAAGA
GTACCCGGAGCATATTTTCCCGTTGCGAGATGATATACTAGTGGAGTGCG
GTGGCTGGCTAACAACCAAGGAGATGGGGCGTCCTTGTTGCAGGGACAGG
CAGATGGACAGAGAGACAGTGGTAACAATCACAGCGAATTCACAGAGCAG
AGCACGCACTCTCCTCTCACTCCCTCACTCACCAGAAAAAGCAGAAAAGA
AAAGATTAACTAATTAGTTAAAGAGAGCACACACACTCCCACCTACACAC
AGCATCGATCGCCCGTCCTCTCCATTTCCACCCACCACCAAACGCCTCCC
GAGAACGCCACCACCAAGCACACCAACGGAGGAGCCAGCTAACAAGATCC
AAGTCCCGAGATTCTTGGCCTGAGAGCTGGATTCCTCGGAGCAGGAGCAG
CAGCATTTGTAGGGATCGGTCGAGGCTGCGGCGGTTGGATCGATCGGTCG
GGGAGGAGGAGTGGCGTGGCGTGGCCGGCGGTGGTGGTGGAAGAAGTGGT
TGCTGCTCGCGCAGGAGTGTGGGTCAAGTTCCTCTACCTTTTTTCACCTG
AAATCCATCTCCATCTGAAATCCATCCAAGAAGAAGAGAGGGAGGGAGGG
AGATTGCAGTACAACCCAAGAAACCATGATGGTGTGGCAGGAGGATTGAT
CGGTGCTCCTGCTCGGTAGTAGTAGTAGTGGCCGCTGCTGTTACTCACCA
GTCGCCATCCATCCTCGCTTCGCTTTCCTTTAATCCTTGCTTCACTTCTC
CTCTCCCTCTACCCCTCTCCCCCTCTGTCCTCGCCTATCTTATTGCCTTG
TTGCAAGAAACACACACCCTACCGGACGGACACATTTTCCCTTTCTTTCT
TTCTTGGTTGGTTGGTTGGTGCTCGCGTCGCGCTCGGCCGTTTGTTGTAT
GATCGGAGGCAGCCGAGATGACAATGGAGCACGGCGAGGATTGCAGCGTC
AAGGTGGCGGTCCATGCCAGGCCGCTCATCGGCGACGAGAAGCTGCAGGG
TTGTAAGGACTGCGTCAGCGTCGTGCCCGGCAAGCCGCAGGTACTTGCTT
CGCCTTATTCTTCGTGTTCTTCCTTCACTCGGTTGAGGTTTTCGTCTGTC
GGTCGGCTGGAATGTTCGTGTTCTTGCTCTTTTTTTCCATCTCTGCCGCT
TTTTCTTATTTTTTGGGTTTATTAGTGCATGTCTCAATTCAGATGCTAGA
TTTACTCGTCTGGCGAATTATGCTATTTACTGGATGATTTTCAGGGAAAT
TGGGCTACTTTTTCAATCCAATTCTGCTACCATGATAACTTGCACTTTTT
TCATTTTTATAAAATTCAGAGACCGCATGGAAATTTTCTGCCGATTTTTA
AGGATTGAAACTGTAGATTTACCAAGGAAATAAAAGAAAGACTTTTGTCT
CCCAATAGATGATACTCTCTGTGTTTTCTCCGTTGATGAATCAAGAACAG
CAAGAAACCAACCGATCCTCTTCAATCCTGTAATTGGATCGAGCAAAAGC
TTCTCAAATTCAGGAAGAGAATCTAGGTTGCTTGCTTTGCTTCCCTGTTT
TAGCCCCCCCAATGACAGAGATGCCTAGTTACCCTTTTTCCCTCCCTTTT
TGACACCATTATAAATGTGTGCGTGTTTCTCTCTCCTCGAAAAACTTCCA
CTGTCGGCAGTGCCAAGAATTCCCCACAATTCTGGTGCGGAGTTGCGTCC
AATCCTGATGCAGTTCGTGCTCTTCTTTATTTGGGCAGGAATCCTGTCAG
CGTCACCACACGCAATTATCATCCCCGGGTGTTTTCAGTCCAGCTTTGTT
TTGCTGATCCGGTCCTTTTCACCCCTCCCAATTAGAGCTTGCTCCCAGTT
CCTTCTTCGAGAAAAGATTTATCAAACCTTGCGGAAGGATTGGGTTTCCA
GCCTGGGCTGAGACTGACTGACTGAGATCTGGCTTATCTCGCTTTCCCCC
TATTCTATTTTTTCTTTTAATTTCCCATCTCCAGCTGTCACCGGCACTCC
TCGCCAATCTGTTCTTGATCTGTGTGACCTTTTTTTTTTCTTCCTTTTTG
TGGTCGAAGCAAATTTGGGGGTTGGGATGAGATGAAAAGGTAGTAATAAC
TTTCTAGTAGCAGTAAAAGTAGATGGAACTGACGTTTTTGTGTTTTTGGA
TGGAAAAAAATGCAGGTCCAGATCGGCACCCACTCCTTCACCTTCGACCA
TGTCTATGGCAGCTCCGGCACGCCGTCGGCGGCCATGTTCGACGAGTGCG
TGGCGCCGCTGGTGGAGGGCCTCTTCCAGGGGTACAACGCCACCGTGCTC
GCATACGGCCAGGTCAATCATGCATACCCCATTCATTCAGTCAGTCAGTC
AGTTTTGCTTCTCCCATGTGCCCTTCATTCATATGGTAGAGCGCATCTGG
ACCACCACGTTGGGGTGGGGGAGGGAGGTGCAATGCGAGCGAGAAAAGCC
AGCAGCACATCATGTGCCGCTGCTGGAACTACAATCCCTTTTCCCTTCCA
GCTGTTTCTGCCATAATGGGGCAGGCCGCACTGCCTAGCTTTCTTGCTCC
CACAAACTAAACCCCAAAAGTTGTTGGTTGTTGTTTCTTTGGCAATTTAC
AGTGACCACAAAATGCTGCTGGTAATTTTTCCAAGTCTAAACTCTTGTAA
GTATCTTTTTTTTTTCCTTTCAATAGACTGGCTCAGGGAAGACATACACC
ATGGGGACGTCGTGCAAGGAGGGGTCACATGTCGGGATCATCCCGCGAGC
CATGGCGGCGCTCTTCGACAAGATTGAGAAGCTGAAGAATCAAGTAGAGT
TCCAGCTACGTGTTTCGTTCATCGAGGTAACAGTCTCATCTGAACTCACA
GTGGCTAGCTAACAGTGGTGTCCTCTACAAAATTTAATCGCATTAAACCC
GTCCTTCTGGATAGATCTTGAAAGAAGAGGTGAGGGATTTGCTTGATCCT
GCTACAGTTGCTGCTGGCAAAGTTGAGAATGGCAATGGACACGTCGGTAA
ACTGTCCGTGCCAGGTAAACCTCCGGTGCAGATCCGGGAGGGGTCAAACG
GGGTGATAACTCTAACAGGGTCGACGGAGGTGCACGTCACTACTCAGAAG
GAGATGACTACATGCCTTGAGCAAGGTTCTCTCAGTCGCGCGACCGGGAG
TACCAACATGAACAACCAATCAAGGTTAGCAACATTATCACCATTTGTCT
TTTGGATGATGACGCTTTTTAATCACTCATAATTTGTTTGACAACAAATG
GAAGAGGCATCATTAAGGTTGCAAACATGCAATAACTGCTGGATACAGTT
TCTTGTGATGAATTCTTGATTACCTGTCACTATAGGATTTTTTCGCAATG
AGTCAACATATTTTGTCTTTCCCTCATAAGAAAAGCCAATGTTTTTTCCA
GTCTAATCTTAATTTTCTGCTCAAGTGCTTTAGGGCACATTCAATCATAT
TGGCTATGTGATACTCCTTTTACTAAATTGTGTAAATTTTAATCAACTTT
ATTTATGCTTTTGGTTTCGGCATGTAATAGTCGTTCCCATGCCATCTTCA
CAATCACATTGGAGCAGATGCGCAAAGCAGACCCCATCATGACATCAGAT
GGAATGCCTATAGAAGAGATGAATGATGATTATCTCTGTGCCAAACTCCA
CTTAGTTGATCTTGCGGGGTCAGAACGGGCTAAGAGAACTGGTTCAGATG
GTCTTCGGTTCAAGGAAGGTATTTGGCATGTTTTTTTTGTTTTGTTTTGG
ATAAACCCTTTATGCACTATCATCTCGGCCCTAAACTAAAGACGATTTAT
GCCTCATGTCATTAGGTGTTCATATTAATAGAGGACTTCTTGCCCTTGGA
AATGTCATAAGTGCTCTTGGAGATGAGAAAAAGAGGAAAGAAGGTGCACA
TGTCCCTTACCGGGACAGCAAACTCACTCGCCTTCTGCAGGTTATATTCT
TCTCACGCAACTGAACAAACATGCCCTTAAAATGTTATTGATTTCATAGC
TATGTCCAATTCAACCGTACCAGGCCAACTACTGCTTCAGCATCGGATAC
TTCTTGTTTTAGTATCTTATATCTGCTGTACTTCTATTTTCTTCGTAACA
GGACTCACTCGGTGGAAACAGCAAGACTGTAATGATAGGTAAGCCATTCT
GCTGGATACCGCTTAATCTCACTTTCCTAATGTTTAGAATATAAGTGCCG
ATCTCCTGTTATATGACTCAGTTTCTCTAGAAGTTCCAGTTCATGTTATC
TGCAGTTTCTCTATTAGATAATATGAATCCCATTATATGACTCAAGTCAT
GTTATCTTCAGTTTAATTTTGTAGACAATATGAATCCAATTAAATGATTC
TGCCATGTTATCTTCAGTTAAGTGTAGTAGACGATATGCATTCCATGCTA
TTTTTCACTAATTGGCCTTAGTGAACTTACATTCAACTGACATGTATCTA
TGTTTTCTCCTGCAGCCTGTATTAGCCCAGCAGATATTAATGCTGAAGAA
ACACTGAACACACTGAAATATGCTAACCGGGCACGTAATATTCAGAATAA
GCCAATTGTGAGTTTGTTATCTTTAGAATCCCAGAAATATATCAGACATG
TATCCTTTCTTACTAAATTGGTATTTGTTTTCCAGGATGGCTATCTGACA
CTTTGCTATTTACTTATCTGATTTCTAGGTCAACAGGAATCCTATTGCTG
ATGAGATGAAAAGAATGCGCCAGCAGCTCGAGTACTTGCAAGCTGAGCTA
GTTTTAGCTCGCGGAGGAGTTGGATCAGATGATGTTCAGGTAAATGTTCT
ATAATCGTTTTACAATGTCATCGGCAAAAATTAGACTGTAGAATGCAGGC
ACTCACACTAAGCATTATAATAACAAGAGATCAATTTACAGGGTCTCAGG
GAAAGGATCTCATGGCTTGAACACACGAATGAGGACCTTTGCAGGGAACT
ATATGGCCTTCGCAATCATGTTCACTCTGATCCATGTGAACCTGAACTGC
ATGTATGTCGAATTCCTAAGCATGCTTTTGGATTTTGTACATTTGAAAAC
AAGCATACACTTGCATTTTCACTGTTCCTTTCACACTAAATGTCCATTCA
CGCAAAGGGAAATAGTGACATAACAAAATTGTCTGCTACTTCTTTTCCAT
GTTCATGCACTTCAAATGATAGCTAGACTGTGCAAAAATCTCACTGCTTT
TGCTATCTGTTTCAGAAAACTGCAAGTGGCTTTACAAAAGGTGAAGGTCT
CAAACGGAGCTTGCAGAGTACGGAGCCATTTGATGTCCTTATGACTGACT
CAGTAAGAGGTAATCATTTGGTTGCATTTTAAATCATGATTTAACCTGGA
ATTTATCTCTTCTGTCTTACTATGCCTGTATGCCACTAATTTTCTATACC
TCCAGAAAGCAACCCTAAAGATATTGATGATGAAGTGGCCAAAGAATGGG
AACACACAATGCTGCAGGATAGCTTGGGCAAGGAGTTGAATGAATTAAAC
AAACAACTGGAGCAAAAGGAGGTATGACACGATGACACAGGAAATTGTTT
CACCAGTAAATAGAAAAAATGTTGTACATAATCTCGCTGGGAGTTAATGA
AATATGGATTCACTTCCCCAAACCTTTTCCTCTGGCCTCCTTTTTTTGAC
TCTTCCCTAATCTTGTCCATGTCTTGGTAAAGTAGACTTCAAAATGCATT
ATCGATGAAGTTGCAAAGGTCGTACCATTGATTACTCTACTAACTTGAAA
CTGTGAAGTAATAAATGGTCGATACAAATACTTTTGCGATCTGTTTTCTG
AGTTAACCTCTTACTCATGGATCCTGATTATGCTTGCCAAGAACCTTACC
ACAAATTTTCCCAAACACTTCGCAGTCTGAGATGAAAGGGTACGGACATG
ATACCGTGGCACTTAAGCAACACTTCGGAAAGAAACTTATGGAGCTCGAA
GAAGAGAAAAAAGCTGTACAGGTTTGTCATAACATCTTCACACTAGCATA
CTCAGTCAACAAGAGTTGCAGATTACTACCCCAGCCATAAAACATACTGT
AGTAATTTTACAAGAAAATTTTGAAAAATTCCAGAAAGAGAGGGACAGAT
TGTTGGCTGAAGTTGAAAGCCTAAACGCAGACGGTCAGACACATAAGGTG
CGAGATGCCCAACTGCAGAAACTTAAAGCATTTGAAGCACAGGTAAATAA
TGCTTCTTAATTATGTGTTCTAATAAATTTCACAGGTTAGTACATGTTAG
TCATAAAATACTGGACATGCAGATTCTAGAACTCAAGAAAAAGCAGGAGA
ACCAAGTCCAACTTCTAAAAGAAAAGCAGAAGAGTGATGAAGCTGCTAAG
AAACTGCAAGAAGAAATCCATTTTATAAAGTCTCAGAAGGTTGCCTTACG
TTTGTGATAACTGCATCATTTGGGAGTATTTGTTATCATGCATATTAAGA
CAATCTCTTAATGTCAGGTTCAACTACAACATAAAATCAAACAAGAAGCA
GAACAGTTCCGGCTATGGAAGGCTACCCGTGAGAAGGAACTTCTACAGGT
ATGAATTATTCCTTGGTAGTTAGTGCCACATTCGTTTGCAGTGACACTCA
AGCACATACAAAAATGTATTTCAGAAATGATTCACTTCTAATTTAATAAC
ATGGTGTTTAAATTTGGAACAACCTTTTGTTGGATACTGGATTTGGTATG
TGTAACGTTTATACAATGCTTCTCTTGTACTATTTTCATAGATGGAGCTT
AATGTTCCAGAGATCATTTTCAAAAGCATGCTCTTCATTATCTGCTTCCT
GAATGCAGTTGCGGAAGGAAGGGAGGAGAAATGAATATGAACGTCACAAA
CTTCAAGCACTTACCCAAAGACAAAAATTGGTAAGTTCGTCATCTAAAGT
TGCTTTGTAAGAAAAAAAAGGTGTGCCATGATACTTCAGAAACAAGGAAC
AAAACAATTTGATTTAGAATTTTTGTGCCGTGCCAAGGGATGCTTGTGTC
CACTTCACTGGAAGCTAGATTTGATGTGAGATATGGTTTATTTACATGTC
TCCACACGCTCAATTAATGCCACCGATTTGTCCAGCGATACCCGTTCGGT
TAGTGCACATTAAGGCAACACGTAAATGATGCAACTCTGCTATGCACCAC
CTCGCTGTGCTGCATGCAAGTACTACTAAATTACAGTGTTGAAGAGACAA
AGGTGTTGTCATCACAGTTTTGTCCCTTCAAGACTGATTAATGTCAAAAC
TCAAAACCAACAAATATGATTAAGAACAGAACATGTTAATGCCCCTTCTA
TCCATAATATAAGTTGAATACATGGTGCACTTTTCTCTATGTGTAGGTTC
TCCAAAGGAAGACCGAAGAAGCTGCCATGGCTACCAAAAGGCTGAAAGAG
ATACTTGAAGCTCGGAAATCTTCAGGGCGTGATAATTCAGGTATCTCTCT
CGCGGTCTCTCTGGTGATGACAATATTATTTGCATCATAATTAAAACTTT
GAATCTAACAACATTCCAATATTATTCATTCCTCCAACCATAGGTGGCAT
GAATGGAACTTCTCCTGGCTCTCATGTAAGATCTAAACATACTTGCCCAA
TAAATTCTGATATTTATTTCGAACATATTCCTCAACATATTTCTTTTGTG
ACACAGATGAGTGAGAAATCGTTGCAAAAATGGCTAGATCAAGAGTTAGA
AGTCATGGTTCATGTTCACGAAGTCCGAAACGAATATGAAAAGCAGTCTC
AATTGTATGTCCTGTTGTGTACTTTTTTTTTTCTCAATTGTTTGTTGCAG
ATATTGTTTACATTTGTCTGCACTGGTTCATAACCACTTCAAAATAATGT
GCTTTTATAGGCGTGCTGCACTTGGTGAGGAGCTTGCCATTTTGAAGAAA
GAAGATGTGATGTCTGGTGCAGCCAGTCCACCCAGAGGGAAGAATGGAAA
CTCTAGGTAATAGTTGCCTCCTTGTTTTGTGATAATACTTAAGGTATCTT
TTAATCACATACTTAATCCATTTAGTATCACAGTAATTAAGTCATATGCA
AGAATTCTCACCATTACTATGTAAAGTTCTACAATCCAGTTTCTTGTAAT
ATGAGTGAACATAGTTACTTCCCTTGTAGTATTCAGGGCTTCTAGATGTC
CATGCATGTCTTGACTGAAATTTCTTTCGCAGGGCAAATACCTTGTCACC
AAATGCACGACAATCTAGGATAGCAGCACTTGAGAGCATGGTCACAATAT
CTTCAAATACTCTTGTTGCAATGGCTTCTCAACTCTCAGAAGCTGAAGAA
AGAGAGCGTTCATTCTCGGGCCGAGGTCGTTGGAATCAGTTGCGGTCAAT
GGGAGAGGCAAAGAGTTTGCTGCAGTACATCTTTAGTGTTGCTGCGGATG
CAAGGTTATTATGGCATCTTAATGGTTTCATACAGTGGAATAATCTTCTG
TCAACAGAATATATCATCCATACTGCTTGGACTTAAATTTGTAGAAATTG
AAACTACGAGCACCCTTCATTTTAAGCAATAGCTGATAGTAAACCAAAAC
TTGAGAGTGGTTTTTCTTTTTCTTTCAAGTAATACAATAATTCATATATC
AACGAAGCAGACACACTTAGCCTTTTTGTGATACCATGCAATAAGTTCAT
TTTTTTTCCTTCTGAAAGTGTGATTCTTTCAAAGCCAACTTCATTTAATG
TATTTTATCTTTGCTGTTGAACCAGATGTGTAGTAAGGGAAAAAGAAATT
GAGATCAAGGAAATGAAGGAGCAAATGACAGAGCTTGTGGGCATTCTTCG
ACACAGCGAATCTCGTAGGAGGGAACTTGAAAAGCAGAACAAGCAGAAAG
AACAGACAGCCCCCATGGCTACTACACCTCCGGTGCGATTTCTCGTAAAC
ATGGCACCCTATTTTTACCATGGACATTCAACGTATAACATGAACATTTT
AATGAAAAACATATACACCTTATAGGTAAGCGGGAATGGGGCTGTGAAGC
ACTCTGCCGATGACTCCAACACACCATTATCCCCAGTCGCAGTTCCTGCA
CAAAAGCAGCTGAAGTACTCAGCTGGAATAGCAAATAGCCCAAGCAAAGG
GGCACCGGCATTCAACAAACAACAACTTAAGGTTTCATATCTCAACCTGA
CATATTTTTTTCCTTGTCATCTTTCTCCGTATCTTATGCATTTTTTATAC
GATGATCTTCAATGCAGATGGTTCCTATTGCACAGTTACCTGTCGGCAAA
AAGGTTTCAATATCAGGGAAATCAGGAAAACTCTGGAGATGGAAAAGGAG
CCACCACCAGTGGCTCTTACAGTTCAAGTGGAAGTGGCAGAAGCCCTGGA
AACTGTCCGAAATGATCCGCCACAGCGACGAAACGATGACGAGGGCTAGA
CCCAGACCCCAGCTTCTTATCACGCATAAACCTCAGAAAGTGATGTGAAA
GGGGCTTTTTCTTTTTTCGGCTTCACATGAACTGACACGGTTTGCGGACC
TACACAGCTAACACTGCAGCTAAAAGACTCGATGGGATCTCCTTTGCGCT
TCGTTTTTACTTAGCCACGGGGTCGGTCAACAAGTATATGTTCTTGATAG
GGTGACTGCCTTTGGGTGTAAATTTCCTGTGCCTATAAAAGTGAGATGTG
AATGTAGAGGTGGTGAAATTAGTGAGTGAGTAGGTGAGTGAGTGGCCATT
CTTCCTGGAAGAAGTGAGCACAATGTTTCAGCCTTCCTTCATCTGACTGG
AGAGATGTCAACAGTTGGTGCTCTTCTACATAAAGATTTACAAGAAGGAT
GATGAAAGTTGGATGC

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