Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA025368

[Submit comment/correction]

Sequence	AA025368
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA025368
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	AGAAAGGTGTGCCCCTGCATGTTGATGCTAATCACATGGTCTCGGAGTAA TTAAGCTTGCCTTTTCTGCTTTGCGAACATGAAGTTCACATAGTTATTGA TGCTCATGTGTACAGTAGTACCAATGCTCCTACTAACTTATGGTAATTCA CATCGCCTTGGAGGAACCAAGATTACTTGTATACAAAAATTCACTAGGAG CTAGATACCTACAACACGAGCATTGTACCACTGTAATTAACTCTGTGTAT AGTACCACTGTGCAAGAATTGGCTTTAGAAATTTTAGGTTAATTACAGCT TCCATGGAAACACAGTCAGTGAAGGAAAATGGAACCAGTGTGTAAAATGC TTTAGAATCCAAGTACTAAAATAAAATAACAAGTAAAAAAAAAAGATACT CAGTAACCCAAGATCTCTACAAGGCCCGCCCAACTTTCTCAAGATCACTT TTGAATTTTGATCAACAGCCAATCAAATGTTTTGCTCTTTAATGGGAATA GAAGACATTCATACCAAACTAAACTTTCTAGAATAGCAAACTGTTCACTA CACTCCCAAAAGAATACTGTCGTTGTGCAAACATATAAGGACACATAGAT TGCATATAAGGAAACGTGAATAGTGAAAACAAAATGGAGGATCTCTTCTG GCAGATGTTAGTCTGTTAATTTAATCTTCTAGCAACAAAATATAGAAATG TTTTAATTTTCCTTTAAATGGTTAGTTTAGGTGGCTAATGTAAAGATCGT CTAGAAGCATTGCCAGTAGGTAATCTACTTCACCAATACAATTAATCACG CACTAGTATTTTAGGCTAACTAGTACAGGAATATTTATCATGGAAGGATG TTCAAAAAATTTCAAGACCTTTGTTCCTAGATAAACTGGGAAATGACACT GAGCACTGATCGGTTTCAAATTTGTGATGCTTCTCAAAGCAAAAGTTATT CTATGGGCTGGTATGAAAAAATATGAACCGGATCAACCTAGTGGTAAGCT CAGCATGGTAGTTACAATTACAAAATCCATGTCCTAGTTGGACTAACCTC ATATGAATAAGAGCAGATAAGGGAAACGTAAGCAAACATTACAAGCATGC AAAAGGCTATTGGCTAATCAGTTTTGGGTATCAGCAAGGAAAACTGACGT GTGCAGAAACGGTAACAGGCACTTACCAATGTTGAACAGAGCAAGCTCTC TCTCGGGCACATTTGGCTTTGCAACCACACCCTCAGGCTCCACCGTGACA AGAACATAAACCTATATTCAACCACACACTGCCATTATAAATCATCCAAC GACGGGATTGTGCAGCCAAGCAACAGTTCGAGCTAAAAGGATTACTGAAT ACACACCGGCCTGGCGCTCTCGGCCTTGAAAATGATCTTCTCCGTGTTGA GCAGCCTCCTGTTCTTACTCCCCAAATCCTCCATAGCTTCAGGATCGTTC AGGAGGCGAATCGAAAAGCTGGAAGGTATCTGCAATCACAGGCAACGCCT TCAAGAACAAAAGCTGCGATGCGTTCATTGGTGCGTGGTGGAACAAAGTA TGCTATGTTTCTTCAGAGCCAATCAGAAGGGTGAGATCGTACGGAGGCCG GGTAGGAGATCTTGACTTCGTACCACGCAGGCGGCCGCAGCCCGGCGAGC CTGTAGAGCCTCCGGCCGTGGCGGAGCGGCATAGTCTCGCCCACCAGCTC ATCGCCGACGCGAATGGCCCTCGCCTCCTCCGCCTCCAGGCTGCTGCGGG GGTACACACAGGGGAAGCTGTTGGCGGACGGTACCGGGAAGAGGCGTGGA TGGAGACAGCGAGAGGGGCGTACCTGCGCGCGGAGGAGAGCAGGAAGAGG ATGATCAGGAGGACATGTTGCCGCGGCATGGTGAGGAGGAGAGCGGAGGC GGCGGAGATGGCATCCGCGCAGGATTCCTTCCGGCGACGTCGACGGCGTC GGAGAAGCAATGAGACCGAGGCGCCGAGCCAGTGTGGAGGCTGGATGGGC CAGAACAAGAATTACGGGCCAGAAGGTTTCATTGAGATGGGCCGTTTGGG CCATAACCTCGGCCCGTTATAGCCCATCCAGACGATCGCAGCCGTCGGAT CCTCTCCCAAACCCTAGCCCCCAAACCCCGAGGCCCTACATAAGCCACTC CCTTCACCCGCCGCCGCCTCTCTCTCGTCCCCTGCTCTCTCTGTATCTCT CGTCGCCTCCTCCTCTTGCAGGGAAGCTCGTCGAGGTAAGCGCACGCCCT CCCATCCCTCGCGCCAGGGCATTTTCTGCCGCTCGCCGCCTCGATCTGAT CATTCGAGCGCTCGTGGTTGCGTCCGTTGCGTGCAGATGTCGTCGGAGGT GGCCAAGGTGGTGCCGGAGTCGGTGCTCAAGAAGACGAAGCGGGCGGAGA CCTGGGACGCCGAGAAGAAGACCAAGGCCGTCGAGGAGAAGAAGAAGTCC GCCGAGAACCAGAAGGTCATCTACATCCGCGCCAAGGAGTACGCCGAGGA GTACGATGCCCAGGTCAGATCGCTGCCCACGCTCGATCCCAGTGCGTCTT AGCAGTCTTTCGTTCACGCTCACGGGCATAAATTTTCGCATGCCGGGTTG CGCTGTGTGGGATCCGCCACTTGTTCGGTGGTTCTCGGGTGACCCGAATA TATAGTTGTTATTTGTTTGGATTAATCTTAGATCAAGAGAAGATAGATGC TAATGTAGCGCTGAGAATTGGGGACAGTAACATAGGTATACCATTCGTTT CCGTGATCCCGCGGTAACCTAGAAATGTGCAAAGTTTTTTAGTGGTAGCA GAACTGCGTCTGATGTTCTATGTGCTATTATTTTCGTTTTGCCTTATGCT TCCTGCCAATTTGGATATAGATAATGACTTAGGCCAGCTTTGCATGTTTT GAAGCAAAATACAATCAACCCTGCACCATCCAAGGATGATATTTCTTTTC TGTCTTGCTGTATAGTATATATTGTTGAACGCTTTGTTGAAATGTAGCTT TGCATGTTTTGCAGCAAAATACAATCAATCCTGCACCATTCAAGTATGAT ATTTCTTTTCTGTCTTGCTGTATTGATTAGAAACTATTTAGTATAAATTC TTGAAAGCTTTGTTGAAATATTAGCTCAGAGATTTTTGGAATATTCCCTT TTGCTTGATGTCTTAGTGTTGTTTCCTGTATTTTTCTCTGTCAGTAGCTT AACTTTGTTGGAAACAAGCTAAATACTTGTTTTGCTTGCAGGAGAAGGAG CTAGTTCAGCTTAAGCGCGAGGCTCGGTTGAAGGGTGGGTTCTATGTCAG CCCTGAGGCTAAGCTTCTGTTTGTTGTCCGGATCCGAGGGTGAGTTACAC CACCTTGCCACTATATTTTGGGAATATATTTTGGTTGTGGACATGTCGGT TTAAGGTGATGTTAACCTTTTCAATTTTGTGGCTGCAGTATCAATGCGAT GCACCCCAAGACCAGGAAGATCTTGCAGCTGCTGCGTTTGAGGCAGGTTG GTTGCCAGGATTGTTGTTGTCTTCACATGTCTCTTTTTAAATTTTTGCTG CTTTTGTTCATTGTGCCATTATACAACTTTGCAGATCTTCAACGGAGTGT TCCTGAAGGTCAACAAAGCCACCATCAACATGCTCCGCAGGGTGGAGCCA TATGTTGCATATGGGTATGTTCCAATTCCACTTTGGGTTTGTTTTGTTAC ATGCCCTTGTGTTTTATCCAGTGTTTTCTCTTATGGTGATTGTCAATTTT GATCTGAACTAGTTTACCATATAGTTGTAAACATTTATCTAGAACTATGA CTATATATGTCTAGCTATTCCTCTTTCCTGAAAAGATCAAACTGAAACAA ATAGTAATCTTAAAATTTGAACTCCTGTTTCTCTTGGTCAGCTGCTGTTT TTATTCTGAAAGAGACAATACTCAGAGAGGAAGTAGTACAAGTGACTGCG ATCTTCTATATTTACTGATTTTGTCAGCTCTTTCTCTTTGTAGGTACCCA AACCTGAAGAGTGTTAGGGAGTTGATCTACAAGAGGGGTTATGGAAAGAT CAACAAGCAAAGGATTCCTCTGTCCAACAACAAAGTCATTGAGGAGGTTA GCATCAGTCCTGGACTCTTCAAATGGCTCGTAATCCATATGCAGCGTAGA GCTGGTTCTGACCTTTTCTGGTGTTCTTATCAGGGTCTGGGAAAGCACAA CATCATCTGCATTGAGGACCTTGTTCACGAGATCCTGAGCGTCGGGCCAC ACTTCAAGGAGGCCAACAACTTCCTCTGGCCCTTCAAGCTGAAGGCGCCC CTGGGAGGCCTCAAGAAGAAGAGGAACCACTATGTCGAGGGTGGTGACGC TGGTAACCGCGAGAACTACATCAACCAGCTTGTCAGGAGGATGAACTAGG TTGTTGTGTTGTCTGTCTAGCTTGTCATCGATGTTTGCTATGTTACGCCT GCTTTACATTAGGAAGTGGATGGTGGATGCAGTTTTGATATTTCGGAACC GTGCTTGTTTGGAAGAATCTGACTTTGTATGTGGATGTCTTGAGACGGTA TTTGATGCCTTCCATTTGGAGCTCCCAATATGTTTGTTTGTGTTGGCTGG CTGTCAACCGTTGGCTGTGGTCTTACTAATGCGTAGGTTCTAGGCTTGCT TATTTTCTTGACGCTCATCGTGATAATAATCCTCCTGACGAAAATAGTCT GTCTGCATCCTGGGTAATGGAGAAATCAATGCCCAACGTCTTATTATGTC AACAATAGAGCAAAAGATGAAAGATACTGAGATTTTAGAATTGTTGATAT AAGGCAGGAAGATCTGAAAACTTCTGTTATCTGAGTTTTAAAACCGAGTT TTATGGAAAAAAAAAGCCTTCAATCAAAACAATCTTCATAACGAATTTTC CAAAGTCCAGAAACCGCAATGATTCCCTTTATATCCTGGTTCACACATCT AGAGGGCCAGGTACTGAACAGGGATTTGAACAGTATCAGGAACAGGTTAT TAATGGGGTGAGCAACCAAACCCTGCAGCACCGACACCTACAGCAATCAT TGTGCGCATCTCAACCAGACCACACCAAGAAAGTAATCAGACGGCGAGCA GGAGCATCCATGGATCTGGCGACGGGCGCCATGGGCTCCCTGCTCCCCAA GCTGGTCCAGCTCCTCGGCGAGGAGTACAAGCTGCACAAGGGGATCAAGG GGGACATCAAGTTCCTGGAGGGAGAGCTGAGGAGCATGCACGCCGCTCTC AGGAAGGTAGGGGACGTGCAGCGGGACCAGCTCGACGAGCTGGTCAAGAT CTGGGCCGACGAGGTCAGGGATCTGTCCTACGACATGGAGGATCTTGCTG ATAGCTTCCTAGTGCGCGTCCAGGGCTTCGAGCCTGACACCAACTCGCAC AAGCTCAAGCGGCTGGTTAAGCAGATGGGGGACCTGCTCACCAAGGGCAA GACCCGCCATAAGATCGCCGGTGAGATCAAGGACATCAAGGCCCGCGTCA AGGAGGTCGCCGACCGGCGTGACAGGTACAGGGTCGACAGTATTGTGGCT AATCCAGCAGCCGCAACTGCCATCGACCCTCGCCTGCTGATGCTGTACAA ACCAAATCAAGAGATTGTTGGTGCCGAAGAGGCGAGGGATGAGCTAATCA AGAGGCTTACATATGGTGAAGATGGCGTGTCCAAACTCCAGCTCAAGATT CTGTCCATTTTCGGATTTGGGGGATTGGGCAAGACAACTCTTGCCAAAGA AGTGTACGACAGGCTTCATGCAGAATATGCCTGCAAAGCATTTGTCGTGG TGGGCCGTAATCCTGACGTGAAGAAAGTTCTCAAGGATATTCTCCTTGGA ATTGACAAGCAAAAGTATATGGATTTTAATCTGGCCATGTTGGATGAAAG GCAGCTCATCGACGAACTTAGAGAACAGCTCGTGAACAAGAGGTATGCAC GATCCACCATATTATATTCTAGTTAAAGCAAATTATGTACTTGGCATTTA GCTCCGTAGAAATTCATATACTCCTTTCGTCCAGAAATAACTGACTAGGT TTGACTAGATTCAAATGTATCTAGACATATTTTAGTATATATAGATATAT TTGTATCTAGATAAACTCAAGTCAGTTATTTCTGGACAGAGAGTAGTTAT AAATAGCATTGTCATAAATATATGTATGCATAAACTATTATACATACTCC CTCCGACCTATATTAGTTGACTCAAATTTGTCTAGATACGGGTGTATCTA GCACTAAAACTTGACTAGATACATTCATATTTAGATGAATCTATTTTATT TCAAATGTCCTTCATTAGGTTTCGGATAGCATATGCTGTATAAAACTCTT CCATATTGTGTACGTGCGATTTTTTTTGTTAGCCCATGGATGTTCTAGTA TTACTTTTAGAAAATAAAGCAATATTGTGCCATGTTTCCTAACGGGTTTT TTGACCATTGGGGTTACATTCAAGGTCTGGCTAATTAAATGGAAAAAGAT AAATGCATGTCCCTGTCTATCGGTTTTATTTTTTTTGGACTTTCATTTGC GTATATCATTATTAGTTACCTACATCTTCGTCGTGCACATTGAATAATGA CACATTTAGATTCCTCAAAAGCAAGGTTGATTGACATGCTTCTTGTTTTC ACATAGTCAATCAACAATTTTACTAATTCTTGACTCTTGCCCTTTTGTTC GAATAGGTACTTTATAGTTATTGATGATATATGGGATACAGAAACATGGG GAATAATCAGGTGTGCTTTCATGGATAGTGACTGTGGAAGTAGAATAATC ACAACTACTCGAATTTTTGAAGTCGCCCAGAAGGCTGGTGATGTTTATAG GATAAAACCACTTTCTCCTGAGAATTCTGAAGAATTATTCTATACAAGAT TGTCTGGTGATAAAAACAAATGCCATTATGATCAACAAGTTGAGCTATCT GAGAAAATTTTACGTAAATGTGGTGGTGTACCATTAGCTATCATTGCTAT AGCTAGTTTGTTGGCTAGTAAGCCAATGGATGATTGGTCTAAGGTGTACA ACTCTATTGGTTTTGGTTCAGGACATAATGAAGAGGTCAAGAACATGAGA AAGATATTGTTATATAGCTATTATGACATGCCTTCTTATCTAAGGACTTG CTTATTGCATCTAAGTATACACGCAGAGGATGTAGAAATCAATAAAATGG ATACGATACGGAAGTGGGTGGCAGAAGGATTTGTACATGAGGAACCAGAT ATGGGTTCGTTTGAGGTTGGAGAGAGATATTTTGATGAGCTCATTAACAG AAGTATGATCCGCCCATATCAGTCTAGACCCCATGGTCCTGTAACTAGTT GTTATGTTCATGACATGGTGCTTGACATGATATGTTCCTTGTCAAAAGAA GAAAATTTTGTTAGCATACTGGGTAGTGACGAGCAACGTACCTCCTTGCA AGGTAATGTTCGCAGGTTAGCCATCCAAAATGGAGTCCTAGATAAACATG GCCCTTTGGCTCACACATGCAGTCAGCAGTTGAGATCATTTAATGCCACT TTGTGTGTTATCGGTGCGATGCCACCGCTTGAAAAATTTCAAGCTCTACG CGTCCTAGATTTGTACAGTTGTACATATCTGGATGGACACTCTTGTAATC TTGAGCATCTTGGGAAGCTACTCCAGCTGAGGTATCTTGGGTTACACTGT ACTCCAATAACTGAACTGCCTGAAGAAATTGGAGATCTTAAGTTTCTGCA GACACTGGACATAACCCTAACTAGGATAAGAGAACTGCCATTAGGCGTTA GTCTACTGAGGCAACTCAGGTGCCTCTGCATGTATCTTTGTTCTGTAAGA GTGCCGGACTGGATGGGAAACCTGACGTCACTAGAAGAGCTAGAGGTGGA AAATGTCAAGTCCCCGAACTTTGTAAAGGAGCTGGGCAAGTTGACCGAGT TGAGGAGGCTCGTGATTGATATTGGAGACTTGGGTGCAGACAGCTGGAAG TGCAAAGCTTTCGTGGAATCTCTAGATAAGCTGCAGAAAATACAATTACT GCGTATTAGCTCGAGGGAGGAGGTCAACTTGGAGACCCATGTGCCCTCAA GACAACTCCTTGACCTGTTACTACGCACCAGTTCCCCCAGGCTGCCGGCG TGGATCAATACCTTGCTTGTTCCGAACCTCATGTACTTATGGGTGACCTT GAAGGCTGTGACGGCACAGGATATTGAGATCCTCGGGAGGTTGCCGGAGC TCCTCACTATGCAGCTGGAAGTAGCTATGTCCGAAGGTGGCTATAGTTCT CCATGTGAATGCAGCGGAGGTGCATTCCCCAAGTTGAAATACTCTGACAC GCCTGCGCCGCTCCTGGCTCTTAAGGGAGCTATGCCGAGCGTTGAATCCG TCTGCTTCAAAGTCTATGTGCAGTCCTTGAAAGATTCCAACTTCGACTTT GATTTCAGTAGCTTGGGGAACCTCCCATTGCTCGAGAAAGCCACTGTTGA TGTCGTCTGCACGGGTGCCACTGTACGGGAGGTGGAGGAGGCGGAGGCTG CCGTGCGGCGCGCAGTCCAAGCCCATCCCAACCATCCATTCCTTCTTCTC GAGAGAGAGGGTAAAGATATACCCGCTCCTTCTACCGTTCCAGGCACGTG CTTCGTATCCTTTTCTGCTCCGCTCGTCGTTACATTCATGCTAGCTAGCT ACCTGCAGCTCCCTAGTCCATATCCTTAATTTTGTTTCTCTTGCAGGAGA GACCTAGTTAGCTGTGCTTATGAATAATTAATGAGCAGTATTTCTGGCCT GGCGGAGAGTACAGGTACATGCTACACGCACATTATTGTTCATCTGGCGC CCGCATGACAAGTACTCGTACTAGTTTTTCCTTCTTCTTTACACGCTGCA AGTTTGCATGCACATCGTTTTTACCTACTAAAGTCATTGTCGCTTCCAAT GTTAAAAAAAAAACTCTACATTAGTTGATGCAAGCGGCCATATATACCTA ATTAGTTTTGGAGCTCATCTATGTTATGTTATAAACTGGGAGATATAGTC CTCACACATCTTTGTTGTCTTTAATTTATTATTATTTTACTATTTTAGGA TCCCATTGAGCCAATCGACGTCTTTGGAATTATGATTTAAGGAAGCACAT GAAAGAACCCATGTTTAGTAATATTTATATATACGTCCCTTTATATTGAA TCGATATCTAATCCCGTCGCTTCAAACTTCTCTCCAATAAGAGAAAATTA TGTACGTTGATTCCAAAGTACTTACATTTTGCTATGTTTTCTTATTTATG CAACCTTGCATCATTTCACTATGTGGCACACTATTTTATAGGTTGATATA ATTTATTGAAGACTTCTACGGCCATGTTGCCAGCTGCTGCACAATATCTA CTCGTCATTCGTTAATCTCAATTCTTCGATCAAGCAAAGCAAAAAAAAGA TACAAAAAAATTCTATTTATGTTCTTATTGTTTGCTTTCTTTGCTATTTT TTCTCAAAAAAAACAAAAAAAAGTTACCATGTTTCCTACTAAGTTCTTGT TATTTACTAAAATGATCCTAGTTTTTTTTAATATCTCGTTCTTTAGAAAA GGTTTAAAAACTACTTGATTTGTGACGTTTTAGTTAGATTCTTCAGTATC TTTATAAAAATTAAAAAAATAAAAAAATTAAAATAGTTAAATGTGTTCCT TTATTTGTTCTTTGGTGTTTTATTTTGTCATTTTGAGTGTGCCTTTTTTT TGTCTAGTAGTGGGGTAGGGGTACTGGGGGGGAACTCCGCCTATGCATTC TAAGGATAATTCGCATAGCCGGTCCCAAGCCCGGAAAAAGGAGGAGGGCC CAATGCTAGACTTAATGGGGATGTTATGTTGTGAGTGGTGATTTCATGGG AATATTTAGCATATCTTTTTTGGCATAAATGATAATATTTTATTTTAGCA TTTAGTAGTTTATCGCTTCAGTTTTGAACTACAAAACTAAATACATGGCA CATGCTTTTTATGTCTTTTAGTGGTTTTTGACATACTATAGCAGCCAGAT CTTGACTTAATTAGGGACAGGTCAGGCAACCATTCCATTATGTCAATCTA GCAATTTTAGCTACAATCTATGTTGAATATGTAGTCGATCCCGGCGCCAA AGCACTTCATCAGCTGCCTCTCCATGCTTGGCCTCCCGAGTTCTGGTATT TTAGGTTAGGCGTGTGTTAGCCTTGCACGGTTTCAGTTTTTGGTACTTCT TTCTTTCTGTTTTGGGTGGTTTTGCTACATGTTTTGTACTTGGAAGACGT TTCTTTTTTTTTAGGTAGGGGAATACTCTAGATCTTTATGGTTCTTCTAA TATATTACAAAGACATGCTTTGGTGTTCGTTCAAGAAATAGAAATTTATA GTCGATCTGCTTTCAAGCTTAATCTTTGATAGTTAGGGTGGGTTCTATGT CAGTCCTGACTCCTGAACCTAAGGTGTTGTTTGTTGTTTGGACCTGCAGG TGAAATGCCCTACCTTGTTCACTTGTATGCCAAAGTTAACTGATTGTTAA TCATGTCAAATGCCTTGACTGCACTATCAATGCCATCCAACCAAAGACCA GGAACAACGTACAGATTTTGCAAGGCAAGTCAGTTGTCAGATTTGTTATT TCTGTTACCATCCATTTTTCAAAAATTGTCGCTACCTATGTTCACTGTTC CAGTTATTTTGCAGCTCTTCAATGGATGTTCCTGAAGTCAATAAAGTCAC CATTAACATGCTATGCAGGGTAGAGCCATGTTCTAGGTGCTCATTTTGGG TTATCTTTGTACATGCTTTCATTATCACTGTTGTATGTTGCCTGAGACTT CTGTTTTGGATCAAGCTAGTAGAGTACTACATTAGAGAGGGAGGCACCGT ATAGCATTATTAGGCGTCAAGAAGAATACAATTCCCTGCACTGGGTTTGG C

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.