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GrainGenes Sequence Report: AA023247

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Sequence
AA023247
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA023247
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
CTGCGGCGGCCATCCATCTGTGGGTACTATGGTAACTGGCCGATCAGCAT
TATCTCCCTGCTCCCGCCATTGGCAACCGCTAAAACAACCCAGGCCCTCC
CTACCACACTTCACAGCAGGCCGCGGCGGCCATCCATGGCCGCCTCCACT
CTCCTCCGCCTCCTCTCCCCGTCAGCGCCGAACCTGCATGATCCAAGCAC
TAGGATCCACACTTCACTCCTCGCGTGGCCGACGCGCCGGCGCCGGTTCC
TGGCCGCCCGCTGCTCGTTATCGTCGCCACTGCCGCCGCCATCGTCGCCG
CTCGAGTTCCCCCTCCTACCATTCCAGCCCGCGGAGGTAAGGCTTCTCAG
CACCGACAAAAGAAGGAGGCCCCTTTCTGCTGTTTTGTCTGGGATAGTTT
TAGATGAAATCTGATGATACTGATTTATTATCTTAGCGAGAGTCCACGAG
TACTAGAGCTCACAATCGCAATGGTTGATTGGAAGCTGCATGTCGAATTG
ATTTGGTTCACGGAATAGAATTACCAATGGTGAGTCAGGATGGATTGGGT
CCAGAAAAAATAATCAGAAATACGATACTACTTATTTCCATTAGATAGGA
CGTCTGGGATGAGGGGTTCAACAATATCTTATCAGGTTTTAAACTTTTAA
TGGAATAAATTAGTTGAATCAGCCAAAGTAGAGATTCTGGCAGGAGTTGG
TGAGGGTAGGTGCTGTTTGATAACCCTTCTTGATGAAACATGGTAGAACT
TGGTACTGCATATCATCACCTTCAGGTTTGTACAGTGATAGCAATTGCTA
GGTGGGAATTTTAAAGCAGATTTTTTTCCTCGCAAGAGCCTGTTAACTGG
GCCTACTGTTAGCTAGACATGACTGTTGTAGAAATCAGCATCTCCAAGTT
TCAATAATGCCACAAGTTATGATTTTGGCCCAAGGGAATTGTTGGTGAGG
TTATCACATCACCATGGTCTGATACTCCTCTAGCTGTGTGCTGCCTTTGC
ATGAGCCAATTAAAGAGTTCTCATTTTCCTTCTAGCAAACTTCTGGAATT
TATTTTGGAGTCACATGCCTGAATCTGCACCATTTCTAATCAACAAGTTT
GCCTCAGTATTTATGCTCTGTCATGAACTCTAATAAAATTATCACTTGGG
CCAGTTGTCGGGCGTGAGGCTTGCACATTTTCCTAGAAAAAACAGGGTAA
TGAGATTGTACTAAGATAATGAAAATGTTTTAGGTGTTGATTCCATCTGA
ATGCAAGACTCTGCACTTGTATGAAGCAAGGTATCTGGCATTGCTAGAAG
AGGTAATTACCATTGGCTCAATCCATTGCTTCATGCTGCTTTTGCTACCT
CGGTATATATTTTCCTAACTGACACAATCCAGCATTTTTTCCACATGAAA
GATGTTTTTCATCCCCTACAAAAAAAAAGGTTTTCCTCACATTTGTTTAT
CATCTAAGAACTCTCTTTTGGTGCATCTCCCACGTGAGAGGCAAAAGAGA
TTTTAAATCGTGACCATCCATTGGTGAAGTTTACCTTTTGGTATTATGCA
TGTGTATGCCATCACAAAAAAATAGCACATATTTTATATTTACTTTAGTA
AAAATGAAACAACACAACAAATTACCAATGCAAAACTATCACAATCATAT
TGCTAATAAGAATGCTAGCACGTCTTTTGGCTACAAAATTACATGCTACA
TCAAATTAAATTTGAAAAATCCACCTTTGTCCCTCAACTATTGCAAAATT
TTATGTTTGGTCGCACAACTCTATACCAGATAAGTTCCATCTCTAAGGGT
AAAAAAGAAAATTTTAGATGGGAAAGAATCATTTTTTGATTTTGAAAAAC
CGTGAAAAATGATTATGAAATATTTAATGCCACGATGTAAAACGCATAAA
TTTTAAATTGTAGGAAAAGAATCAATTGAATTTTGTCAAAATTCATGTTT
TTATAGAATATTTATAAATGTTACATACTTCAAAATTCCTATAATATTTT
TTAAATTTTCTAGAATATTTTTGTTTTTCATCTCGATTTTATCTTTTCTA
TTTTTACATGAATTGTTTCCCAGTTTTTTGCTGCTATGATGCTCAGTGTG
CGAAACTGATGACACACCATTGCAAAACTGCTTTCGGTGGGGTGAGGGAT
AAAATCTAGGAGGTTTTTGCAAATGAGTGGACAAACTCATCTGCGATAGT
ATCACTTCATACCGTTTGCTTTAATTGCACTTCTCTGTGAACTATCACTT
CATAAAGGTTGGATGGGACTCCTCAATTCTAGTTGCTAGTGTTTGAGTAG
TTCATACTTCCATGTTTTCCTATAGATAAGGGGTTTCTTGTATTTACCAC
ACTTGTACTTGGCCTCATGGAAATACAGGTTGCATATTTCCAAGCATGGT
ATCAAAGCCTAGGTTTAGGGTTTGATTTTGTTGGACACCACTACTTGTCC
TTCTCCCGGTCGAATTCTAGTTTAATCGATTATCTCTCATCAATGCACTT
GTATCCCCCAAATACGGTTGATTTCACACCAAGTTTAAGCCACCCATGAT
ATAAAATTACCCTTCATTGTTAGATCCCCGTTGCTTTAGATCGATTTTCA
TGTTTCTTGGCCGCTACTCTGTGACTCTTTGATCTCCTGCACTACATGTC
CCCAACATCCTAGACATCCTTGCTGTCCCATCTGATTCACCATGCTTTTC
CGCGAGTGGTAATAATCTTGCTCTCTTTTTCCACCTTTCACCCCGAGATC
AAAATCTTCTTCTATATGTTGATGACATAATCATTTTCGGAGATGACTTT
GAGTATATTGCCTTTGTTAAGGCTCGCCATAGTGATTTTTTCTTATGTAT
AATCGTGGTATTCTTTGATACTTCCTTTAGATGCTACTTGGGCTAGTGAC
CCTATAGATGATCAACCGCCTTCTCCTTACTTTTTTTTCTTGGCGATTCT
CTCATTACCTAGAAGAAGAAACCGAATATAGTTTCCACTACAACAGAACA
CGCGGGCTCAGGCGGTTATAAATGCCGAGGCACACGCCTAATCGCCTAGC
TCACGCTATCGAACAAATAGGTGTCGTGGTGTGCCAACACTGCTCGGCAT
AATTTAGTGCCTCCTATTATATTTTTCGGAGCAAACTATTGCTTAATTAT
GTTTCATATTAATGATTATTATAAATACAATATGAATCTCAGAAACTCAC
AGTGAATATATACATCTTATAAAAGAATCATAATTCTATGTGTATACTAT
AAAATCAAAGACTGCACACATCTACATGATCCTAAATTGGCGATTGCAAT
CGCTACTAATATTACAATGCAGCCGACTGCATGTTGCAGGCCGGTTTCCT
TTTCTTGGGTATTTTTTTTTTCTTCATCTTCAACCTATCTGTCTGTGCCT
TTCTATTATGTATATCCACGATATCAGCCACCTACAACTCTAACTACATG
TTCTTTTCTTCAATGCTTTTCTTCTCTTGCACAATTTTCTTTATCTTTTC
CTTCAATTGCGTCGTTTCCTTGTTCAGAAGGAGCATCCTAGCTTCAATGG
ACCTCAAGCTGTAAGAAAAAACACAAATTGATCGAATCAGTTAAAAAATC
ACAGAAATCCCAATCGACCAGACCACAAAATTGATTAATTCAGTTAAAAT
ACCTCGTTTGATGAGCTCGTGGTGTTCCCCACTGAGCCAAGGGGCTTTCT
GGCCCTATTCTCCATCCAGGACCCCATGCTTGTCCTCATGTCAAGAGATC
TCACTGCTATGCACGGGTGGCCAAGAGATCTCAGGGGTTCATGGGTGCCA
CGACCAGATCTGGCTGAAGATCTCACAGAGAGGGGCGAGACTGCTAGATT
CGAATCGAGATCTGACATGGAGGGGCACAACGGCCAAATCCAGGTGTTCT
TACATATTTATCGCCGGGTGTTCAAATGTTCAGTCGCTTTGACTTGGCAT
CACAGATGGATTAAAGTGCGCTGCAACTCGATTCGTGCTCTGCATCAACC
TATGCCACGAAATTGCAAAATGTGTTCTCATGACCGCACACACGGAAATT
GTGGCTGGTATCCTTCGCCCTTGTCCTGTCACACACCATATAGCGACACA
GTGGTAAATCACACTTGCAAATCCAGTCCATCTGCGAGTCCATGCCGTTC
TAATCTGGGTCATAGATGTCCTCAGGTACATTCGGGTGGTACTTCAAAAG
AAAAACAGCCATGTACATGTGTGAGATAGAGAAATCTAGAATGCATATGA
AAATGGAGATATCCCCAAATCAGATCTCGATCAAACAAACACCAAGCCTG
GTGAGATGAAAGCGAAATTATTAAGCACATATAATCGATGAGCGCGTACC
GGCATCTCGTAGTCCAGCTCTGTCGCTGATGCCCGCTCAAGCTTTCGTCA
GGCGACTCCACGGTCTCTCCCACCGCCGCCCGCACACTAAATGAAAGTGT
AATGGACGTCGCCTAAATTATTACAGCCCCTTTTCATCAATGGACTCCTG
ACGTCTATGAAGGAGTGTGGGTTGAAGGGAGATAGTGCATCAAGTTTTAG
GCTCAATCAAATGCCGAATAAAAACGAACATTTAATTTATTGAGCACAAA
ACCTAACCACTAGGTTCACCTAAGTGCACCAACAACCTATACTAAGCAAT
ACAAGCAACAAGGTGATAGCAAGATGAAATACTTCAAGCACGATGGCTAT
CACAATATAAAATGTATAAGTAAAGGGTTCGGTTGAGAGATAACCGATGG
ACGCGGAAACGATGATTTTTACCCCGAAGTTCACTTCCAAAGAAGCTACG
TCTCCGTTGGAGAGGTGCGATGGAGCAATGCTCCTCGAACGTCACAAATG
GCTCACCTTGAGGTGTGGTGGCTCGATGTTTACCCAACGCCACACAAGGC
CTCACCACAAGATGCGAAGACACGCAACTCACTGACGCCACAAAAGGCTC
ACCCTATTCTCCCGTGAGCTCGCCACAAAGGCCTACTCATGATCCACTAA
GGGACACTTGAGGACGGTCACCAAAACCCGTACAAGGTTGGGGCTATCTC
CACAACTCAATCGGAGGCTTCCAACAACAAAGCCACAAAAGGCTACAAAG
CCACAACAGGCAACAAAGACCACAAGAGATCAACACTCCAACCACAACCG
TCTAGGGTTCCAAGAACTCAAGAGAAACAAGCCCACAAGCTTGAACTCGC
TGAATCTCCGTGGAGAACTCAAACCTATGCAACAAATGCAAGGGTAAGTC
CTTCATTCCCAAATTCCAACAAAGCTACAAAAGCTATTGGGGGAATAAGG
GAGGAAGAACACAAGAGGAGAACACAAAACTCTCTAAGATCTAGATCCCA
GTGATTCCTTCACAAAGAATCCCTCAAATCCCTCAAAAAGATGCAAAAAT
CATAGGAAAGGAAAGGGGAGAGGGAAAGCTCTTCAAGGTCAACAATGGAG
GAAAGAGAGAAAGCCAAGAACCAAGAAAAGAGCTAGTGCCCCCGAAGGGG
AAGAGAGGCCCCTTTTAAAGGGCTCTCAGATCTGACCGTTTGGGCATTTA
CGACCCTGGTCGGAACTTCTGGTGGCACCCAGCCAAAGGTCAGAAAAATA
GCGAAACGGGAGACAGAAAAACGAGCTTGGCCAGAACTTCCGCTGGTCCA
CCGAAACTTCCCCTGAGAACGGTACTATCGCCAGAAATTCCGACCAAAGT
TCTGACAAATAGAACACATAAAACAGAGAGGTCATAGTACATGAGCGGAA
CGAGAGCCGGAATTCCACCCAGAACAACTGGCGGCAATTACGCCTGAGCA
GAACTTCCGGTGCCTGGCCGGTACTTCTGGCGAGGGCGGTACTACTGCCT
TAACTTCCCGTCCAAATACCGTCAAATAGAACAAACCAAGCAGTGAGGAT
ACAGAAGATGAGCGGAAGAAGCACCGAAACTTCCACCGTACTACCGGCGG
CAAATTGCCCTAGCGGTACTACCGGTGGCTAGCGGGAACTTTTGGTCAGG
GAAATTTCAGAACCAAAACTGCAATAACTTTCGCATCCGAACTCCAAACG
AGATGAAACCAATTTTGTTGGAAAGATAACGACGAATAGAATCCATGAAT
ATATATGTGAGGTATCTCCCAAAGTGTTGAGCCGAAAAACTCGCAAGATC
AAAAACCGCAATAAGATATGCAAGGGAAATCCTTATTTGATGAATAGAGC
TTGTTATGATGATGACCACAAGCTCTAGATCCTCTCATGGACAACATCCA
AATAACAACCAAGAAAGATGATGCTATGTATGCAAAGGTTTGAGCTCTTT
CTGAAAGATGTGAACGAATCACTCACTCGAGAGCCCCTCTTGATAGTACA
ACTATCTATTCTAAACCCGGTCTCCCAACTAACAACACGAGATCGGCAAA
AGAGAAACCCTATCAAGATCATACTGAGCATTCCACTTGAGCTTGATGTA
GACCGTCTTGTCCTTCTCAATATAGAACACCTTTCTTGATTGCTCTTGCT
TGATGAAGACTGGCAAGTTGCTCCCCCATACTCCATGGGGAAACCTCTTC
TTTGAGCTTGACTTCATCATTCCATGAACATCGAGGATGGGAAGCTACAA
GCATGAGATCTTTTAGAGAAGGCGCATCTTGAGCTAGCCCTTCTTCATCC
CTTCCCGAGTGTTGATCCATCGAGATCCAACTCTTTGCACTTGCTTTGAT
CAACCTTCAAACATCTTATTTCTTCATGATTCCAATGGGCACATAGCCCT
TGGACATTTCTTCTCCTTCTTCATTTCTTCATCTCCGAGACCAACACATG
ACCCTAGCGATGCCAAAGGACAAATCTACAAGTGAAACTCAATTTACACA
TTAGTCCATAGAGATTGTCATTAATTACCGAAACCACACATGGGGGCATA
CATGCCTTTTCACTAAAGATTCGTCCTGAGGGAGGTTTCAGGGAGGAGAG
GAGGATATAAAGTCAAGGGTCGGCTCGGTGGTGGGAAATGCTAGTCTACA
AAACAAGCCTAACTAGTCGGATGTGCTTGACCGTTCTCCATCGTGGTGTG
AGATCGTAGCGCATGGCTTAATAGGATTGATAGGGTACCCGTACCAACAA
GTTGTAACTTCTTTCCCGGAAGCTCATCTCCAAAGAACCTCCAGGTTAAG
CATGCTTGGCCTAGAGCAATTTGAGGATGGGTGACCGACCGGGAAGTTCT
TTCCGGGTGCGTACGAGTGAGGACAAAGTACGCAGAAAAGACTAGTGTTG
GTCTGTGGGCTAGCCTAGAGATCCTAGAAAGCTGTCAGAGGTGACAGTCG
CTAGTCTGGAGAGGCCGGGGTGCTACACTTGGGACCAGAAATTAACGGTG
CTTGTAGTGGGCGGCGCAATATGCAATGCCTCTATTCCATTTAGTGCACA
TTGCAATGCCCATGGCTTATAGGGCACCTACTACGACAGCAAAATCCGCC
CTTATTGCGTCTGCCACGGTGCATATCTATCCACCACCCTGATTTGGTGT
CGAGACTGCTCATCCCGGGTAAAAAAATCTATAGGTACTTTTGGCTTGTG
CCGTCCAAAACAGTGTCACGCATGACGGGTATGTTTTTTGGTGTTTCCTT
TTGAGTGCAGAGGCTGAGTTGCGAGCTATGTATCTTTTAAGAGCAGACAT
GACTTACTAAGGTGGTTTCTTAAGTATTTTGATGATGTTTCTGTCACTAT
GTTGACTCCTTTTTTAGACATTACAAGGGCTACCAGTATTGCATGTGACC
CCGTGAAGAATGAGCTCACCAAGCATATCGATATCATGCTTGTTTCATGG
GCTAGCTCCCGCCTGTAGGATCACATGAGGTTGTGATATAGTATGTGCCC
TTTGATTTATAGTTATTGGGTTTCTTCACGAAGGCCAAAACTATATCACA
AGCCTCAATCATTCTCAACTAGGCCCAAGTCCTCGGTTGAGTAGCATTAA
GCCAAGCATCAGCCCAACAAGCATATTTATTTGGAGATGGATTTCAATTG
TCACCACCTCCAATATGTATAGTAGTAATACATTACAAGCTGTCATATAT
CGCATTGTTTGCTTGCATCATTTATAGTTTTTGTATTATTAGATTACATA
TAATAAGGCGTACAATAGTCATTACGAAGGCCAGCTAATCCGAATAAAAA
TAAGATACTCCCTCCGATCCAAATTATTGTCCTCAGATTTTTCTAGATTC
GGATGTAATCTGAGAACATTAATTTGGATCGGAGGGAGTAACGCAATTTC
GTATTTTAGTTACTAGTTACCTTATTGACGATGACGTGTTTAACGAGGGC
CTTGAATCATTTAGAGCATTTATTATTTTTATGTAACATATACATTATAG
TCGTTATGGATGCCAACTAATCAAAGTTAAAGGAGGACGAGTAGGTAAGT
AATTTATTTTAGTTACATTACGGATGATGACGCGTTTAACGAGAGCCTTG
AATTCTTTAGACTATTTTTTATTTTTAGGCGACATATAATTAGGCATACA
TTATAGTCATTACCGAAGACAACTAAGCAAAATAAATGGAGGAAAAAAGA
TTTATTACGTTATATATTTTAATTACTAATTACCCTATGGATGATGACAC
GTTTAACGAGTGCCTTTAATTCTTTAGACTATTTTAAATTTTTAGCTGGC
ATAATTAGGCATACACTATAGTCATTACCAAGGACAGCTAAGAAAAATAA
ACGGAGGAAAAAAGATTTTTTACGCTATATATTTTAATTACTAATTACCC
TATGGATGATGACACAAGGACCTTGAATCATTTGGAGGATTTATTTTAAT
ATTCTTAGGCGACATATAATTAGACATACATTATATTCGCTATGAGGTCC
AAATAATCAAATACAGGGATGCCAGAAGATCCCGCAAGTTACTTATTTCA
ATAACTAGTTACCTTATGGGATGATAATGCGGTTAGGACAGCCTTGCATC
ATTTAGAGGTTTTTTGAAGGTGGCATGTAATTACGTGAACATTATATTCG
ATCCGAGGTCGAGTTGATCAAAATATAAGGAGGAAAGTGCTATTTTGTAA
AGCATTATATTTTTCTATGTAGTGAAAAGTCTATAGCACCCTTATGTGGT
GTATGGCCTGTTACCTGCTATAAGATAGTTGTACTCCCCAACTGTGGATC
ATACACTAAATACCTCACAATAAAACAGGTCCATCGTGAAAATGCTAGAT
CTAATGAGTCTTGGATTGATATCCTTCATTATAGTTTAGTGAAAGAGTGC
TGATAACTGTACAAAAGGGGATTGTGGCACATTGTTTGCGAAACACAAGA
ACCACATAGTGCTTTGCTGCACTGAATAGTGATTACAGAAAACATGTAAA
TCTTAAGCCAGCAGGCCTTCTTATGTTTCTGTCAATCCTCACTCAACAGG
CGTTGTATAGGAGGCAAAATTCCCTTGTACACTTTGTCCTTGATCCAGTT
TTATCAAGCTCTTCTAAGGATTCCTTTGCTGTAAGATATGGCTGTTTGGT
GCAGATAGAAAGTGTAAGTTCCTGTCCTTCATTTTGATAATCGATGTCAG
GGTTCTTGTTAGGGTCGTTCACTTTTTCTACTCAATGATTTATCTCTAGT
ATAGGTTCAAAAGATGGACTTTGGAGCATTAGTGTCAATTAGAGGTGTAT
GCCGTGTGAACATCAAGAACCTTCTCCAGGTACGCCATTCCAGTTCTTGA
GTTTGAATCATTCTTTTGATGTTGATGCACATATCATTGTTTGAATACTT
GAGCACTTCTACAATTGTGTGTATAATATCTTCAGAGGTCTTGTTTTCTT
TTATACCAGAATTATGCCTTCCATTTTAACTGTATTACCTACATGTGGAG
ATCTTATAAGTTTACCTAAGGAGTTTATACACGTTTCCAATGCTGTGTTA
GTTCTGAATTATTTTTGGCATGGCTATAAATAATTTACAGAAATAAAGAG
TGGGCAGGCATATGTTCTTTTCAGATCCTGAATTTGATGCTCTGTTTTAT
GCAGCTACAGTTCACAACATCTCTTGTATTTTACTTCCATTTTAGATGGT
CACATTGTTCCTTGATCCAGATGGAGCCCTACATGCGAGGTGATGTTTCT
CCCATGATGGACAGGTCTTCCGATGACATCGATTTGGGCGTGAGAATTTC
CAAACTAAGGGAGTCCATGTGCAATCTGCACAGCCTACAAATGAAGCTGA
GGGTTTAGCCACTATCTCTGTTCCTTTGCCGATTTGTGAATGCTGTATAG
TAGTTTTATGATCCTGATCTTCTGACAACAGAACTTCTCCACTTAGGTGC
CCGAGGATGAACCGCTGCAAACAAATATCAAAAGCTCTCTATCGTGGTCT
GAGAAAGAAATATTCGAAGGGTATGATGAAAATTTTATCCCTGGGCTGCC
AGAGCGTCTCTCCTTCGCCGCATACCAATCAGTTTCAGGTGATGATAGAT
CATTTCATTTTCACCTCTTCTGATTCTGTTCTAAATCTCAGTATTACCCT
GATTGACCAAATAGAGATGCTTTAGAAAGGGTGTACATCAGCTTCATATA
GTCTAATCTAACATCAAAGCCATACACTACAGGTATGTCAGATGCAGAAC
TTCTTACCCTGCAAAAATACAAGATAAAGGCAATGGATTCAACAGACACC
CTGGAAAGACTAAACAGCGGAATTGAGTACATTGAACACAACATT

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.