Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA021093

[Submit comment/correction]

Sequence	AA021093
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA021093
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	ATGGAATTGTTAACTGTATGGTTGTTCTTCTCGTTGTCCTGCTTAGGGGC CTTCCATGTGGCCGCCTTTTGCTTCCGGCTACTAGCCCACCTTGAACTCT GCCTGCGCCGGCAGAAGAACCTCCGCCGCAAGTACGGTGCGTGGGCCATA GTGACAGGCCCTACGGCTGGCATCGGCATGTCCATTTCTATGGAGCTCGC GCGTCGGGGCCTCAACCTTGTGCTGGTCGGACGTGACGCCGCCAAGATGC AGAACATCTCTGAAATGATTTCTAGGACTCACGCTGTGGAGATAAAAACA GTGCTCTTCGACTTCTCCCATGAGTGCACTGACGAAGGTCGTCGTAAAAT AATACAAATTGATCCTCACACTTAGCTAGCAGCACATGGATCCACACTGC CCCGACTTCTCCATCCTATAGTAGTTTTTGTTTTCCTTTTTTTCCAGGCG ACGAGGCGATGGCAAAGTTCCGGGAGGCCATCCATGGACTGGAAGTAGGG GTGCTGGTGAACAACGCCGGGCAGGTGAACCCGCAAGCCTTGTTCCTGCA CGAGGCAGATGTGGAGTCGCTGATTCGGATCATACGGGTGAACATACTGT CACTAACACAGCTTTCGGGGGCTGTGGTTCCCGTCATGGTGCACCAATGC AGAGGTACCATTGTCAACCTCGGCTCGGGGTCAGCGCTGGCCCTGCCCTC ATTCCCTCTTTAGTCTGTCTATGCTGCCACTAAACGGTACGTAATGACAA ATCTTATGCCTAATAAGTATGCACATGTGAATTCCATCCTTGGGTGATGA GCAAGGTCCTTTAGCTAGGGATTACTACTGCGTTTCAGAATGATAGATTT GTTTCAAAACTTGTTTTGTTCCTTCTCTTCAAACAGTTACGTTGCTCAGT TCTCCAGGAGCCTTTCTGTGGAATACAGGAGCAAGGGAATCGATGTGCAA TGTCAGGTGGCGTCAGGAACCTTTAATTTGTGTGGATATTATTTATATAC ATATATATATATATCGAGTTCAGATGTTGATCATCCTATTTCGTTGGCAT GCAGGTTCCTTTTTTTGTGCGGACCAACATGCTAGCGAGCGTAAAGACCA ACTTTTTTTTCTATGTTCCTGCCTAACGCGGATTCCTATGCTCGCGCGGC GGTAAACTGGATCGGTCACGGATCTTTGTGTGTGCCATACTTTGCCCATA CTCTACAATGGTGGTTTAGCAGTATGGTGCCAGAAATTATTCACGACAAG TACCGCCTACGCCTACATCTGCACGAGAGAAGAAGCAACTAAGAGCAAGT ACAATATGATGATATAGTCACTACGGCACACAGGCTCTCTGCCGTGTGGG CAAAAGACACGGCAAAAGCCTTTCGGAACACGGCAAAGGCTTTGCCGTGT GTATACACACGGCAAATGCCACAAGGCAACGTTCTCCACGGCAAAGGCCC TTTGCCGTGTGTTTTCTAAATAAGACACGGCAAAGGCTTTGCCGTATGTA TCATGCGTAGACACGACAAAGTAAAGTAAGATAACGGTTCCCGCGAAGAT GACGGTGTCTATTCTTTGCCGTGTGTCTTCTCGAAAAGTACACGGCAAAA AAGTTGTCTTTGCCGTGTGTCTCCTTGAAAAGTACACGGCAAAGAAGCTG TCTTTGTCGTGTGTCTCGTGGAAAAAGTATACGGCAAAGAAACTGCCTTT TTAAAAAAATAAAAAAAAATAATTCTGTTTCAAACTTTTTTGAATATTAT TTACTTGATAATCTCATATAGAATATTTTAACCCTTTGTATGTTAAATAT TAGGTGAAATTGTACTCATAATCAAACTTTTCCTGTGGTCACCTATCCTA ACACTACTCTAGGCCTAGCATGCTTAACTTCTTCGTTCCTTCCGAATGAG CTACCAAGAAAGAAGTCATACCTTGTTGCTAATACTTCCATATCATTAAC TCTTGGGCCATGATGTCACACATCTCAGTTTTAGATTCCAAACCATTATT TAAGTAAACAATAATGAAAAGTAATAATAATCTTGAATCGAAATAAAAAA TAAAATGATTTTATTTTATTTCCTTTTTCTATTTAATATGGAATAAATCA TATATTTAAATTCGTAAATCGGAATTCGACAAATAAAATGTTTAAATCTA TCAGAAAAATGTGAGGAATCCAAATATGACATCCATATAATCTTATGAAA ATGGGGTGGTATCATTTTGAATTATCCATTTGGTGGTTGCTTCATAAAAC CCCCCGTTTTTTGTGCCCGAAAAATGGAAAATGGCTTTTTGGTGTGAGGA AAAGGAAAACTTCCTCCAGCAACATTATTCGCCATTCCATAATGGATATG TATGCACAATATGGGCACATTATCACAAACTATGCCTTGATTCTAGCCAT AATATTGGTCACTTGACCCGAAAGCCAGGAAAGCTCGAATGAGATAGGTC ATTGTGTGAAGGTTTTTTTGAGACATATTCAATTTAACAAGTTTGATATT TTTACTTCCAACCATGTCACGTAATATGACACCACGCGAAGGTTTCGCAT TGTTTCGATCGTTTTTGAAATTTTTTATGACTCTTTTAAACTATTGACAA ACTTTGTCGAACGACGGGTATGAAGATTCTTAGCTCGGAGCTGAGCCTCT CTAAACTTTCACTGGATCTCTGATAAAATAGCATATTGTGAACCTAAAAA TTATTTTTGTAAAAAATCATGCCCATCAGATCATGTACATGTAGTTCATA TCTGACACACTTCCTACCGTTTCGGCAGGAATTTGTCTTTTTCACCTGGA GTGGACAGAAAGGTTTGAGATCCCCCCGTTGGGGCATTGTCTATTTAAGG TGGTCTAGTATTTTTGAAAAATAGGGTGGTAGCATTTTAAATTAGCCATT TGGTGGTTGTTTCAGAAAATCTCTCGTTTTTTTCGCTCAGAAAATGGAAA ATGGCTTTTTGGTGCGACGAAAAGAAAAACTTCCTCCTGAAACATTGTTC ACCATTCCATGAGGCACATGCATGCACAATATGGACAGATTATCATAAAC TATGCCTTGATTCTAGCCATAACATTGGTCATTTGACCCGAAAGCCAGGA AACCTCGAATGAGATAAGTCATTTTGTGAAGGTTTTTTAGAAATATTCAA TATAACAAGTTTGGTATTTTTCCTTGCAACCATGTCACATAATATGACAC CACGCAAAGGTTCTGCATTGTTTCGATCGTTTTTGAATTTTTTATGACTC TTTAAAACTATCGACAAACTTTGTTGAACGACGGGTATGAAGATTCTTAG CTCGGAGCTAAGCCTCTCTAAACTTTCACTGGATCTCTCATGAAATAGCA TATTGTGAATCTAAAAATGATTTTTTTTTAAAATCACGTCCATCTGGTCA TGTACCCGTAGTTCATATCTAACCCACTTCCTACCGATTCGGCCAGAATT TGTCTTTTTCACCTAGAGTGGACGAAAAGGTTTGAGATCCCCCTGTTGAT ACATTGTACACTTAAGGTGGTCTAGTATTTTTGAAAAATGGGGTGGTAGA ATTTTGAATTAGCCATTTGGTGGTTGTTTCATAAAATTTCCTATTTTTTA CGCTCGTAAAATGGAAAATGGCTTTTTGGTGCGACGAAAAGGAAAACTTC CTCCTGGAACATTATTCGCCATTTCATAATGCACATGCATGCACAATATG GGCAGATTATCATAAACTATGCCTTGATTCTAGCCATAACATTGGTCATT TGACCCGAAAGCTAGGAAACCTCGAATGGGATAGGTCATTTTATGAAGGG TTTTTTTGAGACATATTCAATATAACAAGTTTGATATTTTTCCTTGCAAC CATGTCACATAATATGACACCATGCGAAGGTTTTGCATTGTTTTGATCTT TTTGAATTTTTTATGACTCTTTTAAACTATCGACAAACTTTGTCGAACGA CGGGTATGAAGATTCTTAGCTCGGAGCTGAGCCTCTCTAAACTTCCACTG GATCTCTAATGAAATAGCATATTGTGAACCTAAAAATGATTTTTGTAAAA AATCATACCCATCAGATCATGTACTTGTAGTTCATATTTGACCCACTTCC TTCCGTTTCGGCAGGAATTTGTCTTTTTCCCCTAGAGTGGGCAGAAAAGT TTGAGATTCCCCCGTTGGGACATTGTCCATTTAAGGTGGTCGAGTATTTT TGAAAAATAGGGTGATAGCATTTTAAATTATCCATTTGGTGGTTGCTTCA TAAAATCTCTCGTTTTTTTCGCTCAGAAAATGGAAAATGGCTTTTTGGTG CGACGAAAATAAAAACTTCCTCCTGCAACATTGTTCACCATTCCATGAGG CACATGCATGCACATATGGGCAGATTATCACAAACTATGCCTTGATTCTA GCCATAACATTGGTCATTTGACCCGAAAGCCAGGAAACCTCGAATGAGAT AGGTCATTTTATGAAGGTTTTTTTGAGACATATTCAATATAACAAGTTTG ATACTTTTCCTTGCAACCATGTCACATAATATGACACCACACGAAGGTTT CGCATTGTTTCGATCGTTTTTGAATTTTTTATGACTCTTTAAAACTATCG ACAAACTTTGTCGAACGACGGGTATGAAGATTCTTAGCTCGGAGCTGAGC CTCTCTAATCTTTCACTGGATCTCTGATGAAATAGCATATTATGAATCTA AATATGATTTTTGTAAAAAATTATGCCCATCCGATCATGTACCTGTAGTT CATATCTGACCCACTTCCTGCCGATTCGGCAGGAATTTTTCTTTTTCACC TAGAGTAGACGGAAAGGTTTGAGATCCCCCGTTGGGACATTGTACATTTA AGGTGGTATATATCTGACCCACTTCCTGCCGATTCGGCAGGAATTTTTCT TTTTCACCTAGAGTAGACGGAAAGGTTTGAGATCCCCCCGTTGGGACATT GTACATTTAAGGTGATATAGTATTTTTGAAAAATGGGGTGATAGAATTTT GAATTAGCCATTTGGTGGTTGCTTCATAAAATTTCTCCGTTTTTTTCGCT CAGAAAATAGAAAATGGCTTTTTGGTGCGACGAAAATAAAAACTTCCTCC TGCAACATTGTCACCATTCCATGAGGCACATGCATGCACAATATGGGCAG ATTATCACAAACTATGTCTTGATTCTAGCCATAACATTGGTCATTTGACC CGAAAGCCAGGAAACCACGAATGAGATAGGTCATTTTATGAAGGTTTTTT TGAGACATATTCAATATAACAAGTTTGATATTTTTCCTTGCAACCATGTC ACATAATATGACACCACACGAAGGTTTCGCATTGTTTCGATCGTTTTTGA ATTTTTTATGACTCTTTAAAACTATCGAGAAACTTTGTCGAACGACGGGT ATGAAGATTCTTAGCTCGGAGCTGAGCCTCTCTAAACTTTCACTGGATCT CTGATGAAATAGCATATTATGAATCTAAATATGATTTTTGTAAAAAATTA TGCCCATCCGATCATGTACCTGTAGTTCATATCTGACCCACTTCCTGCCG ATTCGACAGAAATTTTTCTTTTTCACCTAGAGTAGACGGAAAGGTTTGAG ATCACCCGTTGGGACATTGTACATTTAAGGTGGTATATATCTGACCCACT TCCTGCCGATTCGGCAGGAATTTTTCTTTTTCACCTAGAGTAGACGGAAA GGTTTGAGATCCCCCCGTTGGGACATTGTACATTTAAGGTGGTATAGTAT TTTTGAAAAATGGGGTGATAGAATTTTGAATTAGCCATTTGGTGGTTGCT TCATAAAATTCTCCGTTTTTTACGCTCGTAATATGAAAAATGGCTTTTTG GTGCGACGAAAAGAAAAACTTCCTCCTGCAACATTATTCGCCATTCCATA ATGCACATGCATGCACAATATGGATAGATTATCACAAACTATGCCTTGAT ACTAGTCATAATATTGGTCATTTGACCCGAAAGCCAGAAAATCTCGAATG AGATAGGTCATTTTGTGAAGGTTTTTTTGAGACATATTCAATATAACAAG TTTGATATTTTTCCTTGTAACCATGTCACATAATATGACACTACACGAAG GTTTCGCATTGTTTCGATCGTTTTTGAATTTTTTATGCAGGTTTAAAACT ATGGTCAAAACGGCGAGCATGAAGATACGTATTCAATATAAATATCTAAT TTTTGAGTGTACATAGATAGATCTTATTTTTCTGCAAATTTTGATATATT ATTTGTATTTTTCTGAATTAGAATGATTTTTTTATGATTTTCCTAAGAGT AATGTGATAAAAGGCAAACAAAAAAAAAAGACTTTGCCATGTGTACTGCG AAATACACACGGGAAAGGCCCTTTGCCGTGTGTACTGCGGAATACACACG GCAAAGGGCCTTTGCCGTGTATACTGCAGAACACACACGACAAAGGACCG GCGAGGGCACACGACAAAGAGACCACCGTCTGCGGTCGTTAGCTCCTCCC GTTAAATGGACTTGTGGGGTCACGGGTCCCACAACGTTGCCGTGATAACA CCTATGCCGTGTGCCGTTGTCAACTTTGCCGAGTGTATTTTCTTTGCCGT GTTCCTTTATGGGTCTGTGCCGTGTATATTTCTTTGCTGTGTTATTTTTC CAGAAATTTGTCGTGTTCACGTACTTTGCCGTGTATTTTCTGAGTTACAC ACGGCAAATACTGTCTTTGCCGTGTTCCGGTGCGTTTGGCACAGGGCAAA GACGTGTCTACACGGCGGCGACATTTTTTCCCGTAGTGAGTAGTAGCTAA GAGCAAGTACTACCTACATTCCAGTTTATAAAGCAATTATATATTTTGAG AAAATAGTTTAAAAGTAAATTTTTTCAATAAAATACAAACTATATTTAAC AAAAAATATATCATTAGATTCATATTTAAAATACGCTTCTAATGGTATAA ATTTTTATGACATACTATTTATATATTATTAACCAAATTTACAATTAAAC TATTTTATTGAAATACATATTTAGTTTATAAAAGCGGAATGGAGTAGAAG AAAATGATGAGCAAGTAGAAGAAAACGATGCGCTGATGATAGTTTAGGCA CCGGTCTCAAGGTGTGGAGAAAGAATGTACTTCAATTGTCCACGCATGAA TAAAGTAGAGGACTTATCCAAAGCAACTTAATTCCCACTTCAATTGCCCA CAGTTGCTGTTAGGCTGGTCATAGTGGGGGTAACTTCATTAGTAACTAAG AGTACAAGTTAGCATTGTTTGCTTACGTGGCAATGATTTAATGAAGAGAG AGATGGATTGAGTAACTAGCTATGTTACTGTAACATCACACATACCAAGG CAAAGTGTGTCTATAACCTAATTACTAATTAGTGTGGCATTGCATGTTAT CACACCTAAGTTATTTCCCACTATGAAGGTAGTAACTTAGACTAGTAACA TGTGTATGTTACTACTCTAAGTTACTCTCCACTATGACCAGCCTTATCAT CAGATGAGAAAATAATATTCAATTGCCACTTCTTCTTTACTGCTCTATTG AATATAAGAGCAATTTACCAAGCGAATTATCCATAATAAATGCTAGATAA AACATGATTAGGATAATAGGCAATATACTAATCATGTGAAATAGCGAATG CATATTAAGTCATATAACCAAACAAACTGCAAGGCATAATACTTTAGATA CGATCAGAACAAGATTGAGAAAGAAGATATACACGGCAGTAGCAGAAGAG GAACCGCCGGCGTTGGAACCGTCGTTGGCCATGTCGTCGAGGAAGAGGGT GCTGATGTCAGGGAAGAAGTCCTCGTCGGGGAAGACGTCGCCGCAGTCGC TATCCGTGACTGAGTCCGTGACGAAGTCAGTAGTCGCGCCGATAGCGCTC CCCAAAAACCTTATCGCCCTTCTCCCGTACAGGACTCGTAGCAGCGGGGT TCCGGAGGCCTACTGTCCCGGCTCGCGGTGCACGCCACAAGACGGGATGG GGAAGAACTGTTGGCAGCTCAGTGCTCTGGAAATTGGAGGCGATGGGTCT GATAGATGCCTGAGAAAAGGAGCGACCTTCCGCTCTTATAGGTATGGGTA GACAGGCGAACAGGCGACGTCGGAAGAGGAAACGAACATGCAGCGACCCA AGCCAAACAACCTCCACTTAGTTCGAATTAAACCTCCACTGAGTCGTATT TAAAACCCATTAGAAAACTTTTCAAATTCTGCACACCGGTTTATATAACA ATCATGCGTGGCAAAAAAGAACTCGGCTCGGCGAGATTCCCGCAACCCGT GGCGCGCGCGCGTCGTGACGAGGCGAGGCGTGGAGTGGCGAGGCGAGGCG GGCGGCGAAGGAGGAGGAACGCGCGTGTGGGACTCTCTCGTTCTCCTTCT CATCCTTTTAACAAGTAGTAGGAGAGCCTCCCTTATAAGCTGGTGCAAAC CTCCTCAACTAGCAATGTGGGACTAAACATTTGTCCCACCTCTTGCCATG CATGAATGGGCCTCATGGGCCTTTAGGATTTTCAGTAATTATTGGAATGA AAAATGGGCTAGGCTATTTGGGCCAAAATTCCAACAATCCCCCACCAGAT CCCAGAGGCACATGTAATTTGCCTTTGGTTCCAAAACACTGTTTATATAT CGGTAGGAGACTATTAAGTTGAACTTTCACCTACAATTCTATGCTACGCT AGGCTGCGACTTGTACAGTGGACTATGCCTTGAACTGCAAGTTTGCTGCA ACCTAGCTTCACACGAAGCCTTGACCGATACTGGGCTACCGTGGGACTTC CACGCGGGTGGAGCTTATGCATCATACTCCATGGCCTTTCATGAGTTTAT TAGAGAGCACCCAACTCTAATAGACTGCGACGTTTGACAGTCAGACTCAT ATAGGTGTGTTTTTCAATAGATGTTCTGCAGGACAACATCTCTGATTAAG ATTAAGCCATTTAGAACACAAATCAACCTGTCGTGCAGAATAGAGAAGTA TTACATCTTCATGGAAAGGTACAATTGTCAATCTTGGCTCGGGGTCAGTG CTGTCCCTGCCCTCATTCCCTCTTTACTCTGTCTATGCCGCCACTAAACG GTACTAATGACAAATCTTATACCTAATAAGTATGCACATGTGAATTCCAT CCTTGGGTGATGGGAAAGGTCCTTTAGCTAGGGATTATTGCTGCGTTTCA GAATGATAGATTTGTTTCAAAACTTGTTTTATTCCTTCTCTTCAAACAGT TACGTTGCTCAGTTGTCCAGGAGCCTTTCTGGTTAATACAGGAGCAAGGG AATTTGTTTGTACATCTCAGGTATGTATGAAATGCAGGTTTGGTGTCTGG GCACCATGGTGTCCCATATGGACTGGTGCACCTTGGTGCCCAGACACCGT ACACAATACACGTATGTTTTGCATACCTAAGTTGCATATATAAACACGTA TCCTGGTTACGTACACCTTAGGTATGCAACATCTTAGGTATGTGATACCT AGATACGTGTAACTTAGGTATATGATACCTAGGTATGAATAACTACGGTA CGTATATCCTTAGATATGTGTGGTTAAAAGCAAAATATACTTGTATTGTG TACGGTGCCTGAACACCAAATATATATATATATATAAATATAAAATATAT ATCGATTTCAGATGCTGATCATCCTATCTCGTTGGCATGCAGGTTCCTTT TTTTGTGCGGACCAACATGCTAGTTAGCGTAAAGGCCAGCTTTTTTCTTT CGTTCCTGCCTAATGCGGATTCCTATGCTCGTGTGGCG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.