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GrainGenes Sequence Report: AA042207

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Sequence
AA042207
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA042207
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
AAAAAGACGTTCTCCAGGGGAGTCTATGGAAGCCCGCCTCCAGATCCAGA
CTCCGTCGTCGTGGTTCCCCGTGCGTCGCCGGGTTCGTCCGTATCCTTAC
AGATGATGGAATGCAAATCATGGTGGCTTGCCGGTACAGCTTGTGTGATT
TGCCGAGAGAATTGCGCGTTTTTTAGAGCATCTCTGATTTTTCTTTGAGG
AATTATCAGCGGCGGCGGTCCAGTTCCGAGGCGGTTGACTGCAGACGGGC
ACCACGGGGATAGGGGAATGGATGAGCATGGTCCTTGTACGAGCGACAGC
CAGTCCACGTACCACACGGATCTGGGCTTGTTCGCCCGCACCTTGGAGTG
TGGTGGCAGCAGCAGGCGGATCGCTCTCTGGACTTCTACCGTCCGGGGAT
CATTTTTTGGGGGGTTCGTCACTCATCAGCCTGGCGACAGATTGGAGATG
GAGGATGCCGTCGGCGCGATTGTGACGTCTGCATTCTTGACTGCGCCTGC
ACAGGGAAGCTTGAGTTTTGCAATGGAGCCCGCTGGGAGCGCCGATGTGC
CCTCTGCTGGTCTAACTGACAAAGTGTTTTGCTGGACGATGCTCGCAGAG
TGCTGTGCCTCAGCAGGTAATCAATCATCTCTGTGTTAAAAGTTAGATGT
TATAACAATTTGATGAGCTAGAACTTGGTTTGGATATTTCTGCGAGACTA
TAAATAATATAATTGTAAAAGATTCTTAGAAATCGACTGAAGGTAATGCT
GCAGCGCATGTGCCAGATATGACAAATTACTATGTATTGTTTAGTAGCGC
AGGCTGTATGGCAACTAATTTTTTGCTCTCCCCTGATAGAATAAAAATCT
GAACCCTGAACTGACAATGTTAGATTGTGCAATAATTCTGTGAAATTGTC
TTTAGTATAGTGTCGCTTCCATGTGCCCGATATGGTCGATGAGCAACGGC
AAAGGCCCTCGTCCCATGGGTCGGTCAAGGCCCGCCCTCGTTGCCACGGC
CCTGAATCTGGCTTGGTTCTGGGTTTCCAGCGAGGAGAGGAGAGGTTCAT
GGAGCTCTCTGTGTTGCGTGTAGAGATGCAAATCCCACTTCTATTCTCGC
TACATATGCAAGTGGCAAAAAACATGCAATTTGGACTGTTAGTCGGGAAT
ATTTCGGAGACTCTTAATTGTGTTACAATCTCTTACTGTATTGCTCTGTT
TCTCAAACAGCTCCAAGTAATTGGGTGCGATTTTTAGAGGTTGCTTTGAT
AACAAATTGAGTATATCTCCTGCAGAGCTAACTTATGTATGTTTCCCTTT
GTCAAATACTGGGCAGGTTTACAATCTCAAGAGGACAAGGACAAAACTTT
GGCCTTAGCTGGGGTGATGCTCTTTTTTGCATCTTTTGCTGTGGTGGATA
AGAGTCCCCGCGGTAGGGAAATGGGACATCTATCTCAGCCTGCTGATGGA
CCAGTGCACACGCTAACTAATACACCAAAAGAAATGGAGATTCTTTGCTT
GTATGTCATCAATCATCATGCACTAACAACATTCTTTGCTTGTCCCTGCA
GTAGGCTGCTACGTACAAGGTGTCTCATTCCTTTCTTGATTGAGGGAAGC
AAGACATACAGTGGTCCTGCCCATATTTCCGAGCAAAAAAAGTTGGTTTC
AAGAAGAATACTGCTCTTCGAAAGAGCCAAACTCCCCTCCCTTGAAGCAA
AGTGAGGTGACAATTAGTTGCTCTTTTTGTTCTTATTATTAGATGCATCT
ACCCGCTATTTATGTGCAGCTTAAGTAGACGCCATTCATTTTCAAGCAGT
CTACATATGAATCCATGAATCTCGTATGTTAAGTCGTATGATTAACCAGG
AAGCACGAGCTATGGCTGTTGCTCTGGATGCTTTGGCGCCCTATGTCAAG
AAGATGATCGCGGACATAGCGGAAGAGGAACTGAGCATGCTGCTGTGTGT
CGAAAGAGAGATCCAGAAGCTGAACGGCAACTTGGTGTACCTCCAGGACT
ACCTTACTGACGCCGACAGGAAACGCATCACAGACAAGAGCGTGAAGGCG
TGGGTGGAGAAGCTCAAGGACATCATGTACGAGGCCACCGACATCCTTGA
ACTCTGCCAGCTTGAGGCCATGGAGCGCCTCACAGGCGGCGGTGCCTCCA
ACAACCATTCAAGTTCTATTGGAGGGTGCATGAAGAAGAAGCTGCAGGGC
TGCTTCCAGCCATTATTGTTCTGCATTCGGAACCCTGTGTTTGCCCACGA
GACGGGCAGCCGCATCAAGAAGCTCAACGAGGAGCTGGACACCATTTGCA
AGGATGCCACCAAGCTCAATTTCATCAACCTCGGCTCCTATCAGGAACGG
AGGAAGCTGACAAGTCCGACACGTGTCAGGAACAAGACGACGTCGGGGTT
CAGTAAGTCAGAATCGGTGGGGGAGAACATAGAGGAGGATGCAGAGCAGC
TTGTGCAGAAGCTGATCACTAACGATGGCAGAGACTTTAAAGTAGTGGCC
ATCGTTGGCCAGGGTGGCATGGGCAAGAGCTTCCTCGCCAAGAAGATCTT
TGCAAGCGAGGCCATCGAGGAGGGGTTCAAAACCAAGATATGGCTGAGCG
TTACTCAGCACTTCGACAAGGTGGAGCTGCTAAGGTCCGCCATCACCCAC
GCTGGGGGAAAGCACAATGAGGAGAAGGACGAGTCCATCCTCGAGAGGAC
CCTCACTGAGGCCTTGTTGGCGAACAAGTTTCTGCTGGTCTTGGATGATG
TATGGAGCGACACAGCATGGAAGGACATCCTCCAAGTCCCCATTACTAAC
ACCAGTTGTACACAACCCGGGAGCCGAGTCCTTGTCACCTCTAGAATGGA
AGATGCTGTTCGGAGGATGGGAGCCTCCAACGGCGACCTACTCCGTGTCA
GAAAACTAGAAGATGAAGATGCATGGTCCTTGCTCAAGAAACAGCTGCCT
CTGCCAGAGGTCAGTAACTCGGTGCAAATTTAGAAATGATGTCAAAGTGT
CAAACTAGTTAATTTGCTCTCCACTGCCTATTAATAATTTGGTAATACTA
GTACTAATTTGCAGCGTGCGCGCGCCAAACACACAGGTGCACAAGAAAGT
CTAGGTTTGCGTAGTGCACTAATCTTTACTCCCAAAATGCAAAGTACCCG
TCAGTTCGAAAATACTTGTTCTGTATAGCATTGACACGGTTTATATGTGG
TAATATTTTAACAATTAGTTTCTGTTAAGTATGCTACTCCATTTAAAACT
AAATGTTCATTGGGAAAATATGATCAACGATAGTTTTTATTTATCAATTT
GATGTTATTGATCTATCTAGTACTCTTTAAAAAAATCTATGCTAATCGGA
GAAAAAAAAGGCTAAGCGCCATATGATCTGGTTGGACCAAGGTTAGCTCG
CTGTGACATTAACATCTGTGTTGTAATAAAAAGGTACCCAATTGCATGTT
TGTATTAGGACTGTAGCCATAACCCTATAGGCTTTAGTCTCTAATTTATA
TTATAAGATGAAGTTGGCATCACTTGGTTAAAATAATAGGGTTTATTATA
ATAACATATTTAAGATTAGTCACACTTATTCAACCCATTTGGACATTAAC
ATCTTATTTTGTCCAATTTACCTCAAGGTCATGCATGTTTGCAATAGGAC
GGCTAATTTTGTAATAGATTCTGACTCCAAATCTTCAATAGAATTGTTAG
AAACATGTGGTAAGAGGATTCTGTAAATTTTGACACGAAGTGTTATGACA
CATGACATAAATAGAATTTGGCCCCTATATATTATGCAAGGACTGTTAAT
TCGTCACGAGCATTACACTGGAGTAAGAAGTAGAAGCAAGAGCAAAGAGC
TTAAAAGTGACCATTTCGAGCGGATCCCCACGTCACCCTATCGCCGCCGC
CGCAAGGCCTCTTCCTCCCTCCCTTCGTGCCGCCGCGGAAAGGGTTAGCC
GGCCAAGCTCACGCTGGCTCCCAGGAAGTTGGCAGTGGGCGCTTTCATGT
GGTTGCGTGGTGGTATTACGGGGCGGCGACTGCTGCTGCCGGTGGTGTGG
GGCGGCGCTTGGCTCTAGGAGGCATCCTAGCTCGCGGTAGCAGAAGTGGT
CTTTGGCGCGCAGTGTCTGTTCGCAGAGCTGGGCCTGTCACCGCGGGCGC
ATGGTGGTGGTCGTGGGCTTCCGTGCGTGCTTGATCTGGGCCTTTGTGGG
CCATGTCTGGCATCGGTGCTGGTGGTGTGGTTTGGGCTCAGCCAGCGCGT
CGTTCGCTGGATCTGGTGCGGGGAGGTGCTGTGGCTCGGCGGTGGGGATT
CTAGGACATCTCGAACATGGTGGCGCTGACTGGATTCGATCTGCATGCTT
CGGCGACAATCATGCTGACAGTGGTGATGGTCCTCATTGACGGGGAGCCT
AGGCGTGGCAGTGTGCGGGATGTTGGGCCTTGCTGGGTAGTTCCGGCAAT
TTCGACAGGCTAACGCGACTCTTTGAGTTTGGTGAGCTCCAGGTGAAAAC
TCCTACACCAACCTTGGTCGATGATGGTGATGGCGGCACGCTCAGATGTC
ACTCTCCTCCTTGGCGGCATTGTTGAGGAGCCCCTTCACAACCCATATCA
GTGTCTGGGTTGTTCGTGTGGTTGGCGTTGTTTTCATTTTTCATCATAGG
CTAGGCGGTGCGTGGCCCTGGTGTTGGCGTTGATATCAGAGAGGGGACTC
CGGTTTATCGCCTCCATTCTGTTGACTATTTAGGTGCTTAGGTGTTGGCT
TTGGTCGCTCGGACGGTTTGGTCATTGGCTCGTGTGGTGTGTGGCCTCGG
GGCCCGCGTGTGGCGTCCTGCTGTATCGATTTTTTGCCTGTTTTCTTTAT
AAAGTGATCAATTCCCTTCTTCTACATTAATGATATGGCAAGCCTCCTGC
CTTCTTAAAAAAAGTAGAAGCAACTTTTGCACTGCAATAACTAATCTGAG
GCCACACCATTCAAAGAAGTACTCCCTAGCCATCAACCCCAAGGTGTTTT
GTTGATGCCGCTTGCTGGTATTCCCAAGAGTTTTCTCCGAAACAATCGGT
CCAATTAAAATTTTTGTGTGAGCAACGAGAGATCAATTCCACCACAAATA
TTTAACACTTCACAAATAGCATTGGTGGTAAAATATTAAACATTGAAGGT
TAAATTTCAATTGTTTGTTCTCTTTTGTAGGATTGGGTAATTCTAGTGAG
TATATCCACAAAGAAACAAAGTATTTTAGTAAGTAGCATGGTCATCATGT
GCAAATGCATGGCTTATATCTACTTGTGTTGCTAATTCTTCTATATCTAT
CTATTATACAGTCATTAAAACAATAGAAAAAAAGGCACCACAATCGTCTA
CATAGGCTAAACTATTTGATCCCTTGATCAAGATATGGGCCTTATTTATA
ATGGATCAGATTTAAAATAATAAAAAATAATAAGAAAATATATCAGTTTT
CGAAACGGTCATGACATAGATTATCGAACGAGTAGCCTGGATGGTGGATT
CAGATTTTCTTACGTCATCATGATGTCAGCAAATGGATATATTTCATTAC
GCGCTTTTTTCCCTTCATGATTTCTCATCGAGTCCAAATTCGCCAAACCA
TATTTCCATTTCGACCAGTTCGGCAAGCCAAAATCAACGTAAACAACAAA
CCAATTTTTGGTGAATTTATCAAAGAAATTTCCTAATATCTCATTTTAGA
GTTTTTTGGCACTTTGATTGAAATAAGTTCTTGATAGAACAATGTTGACA
ATTCATTTATAATTTTAAGATTAATGTGACATGAAATAGGAGAGTACTAT
GCGTCCCCCGGGGATAATTTCCTAATATCCCCCGGGTCCTCCAGGCGACA
CGTGTCCCCACAAAATACCCTCTATTCCCGCTTTGGCTATAAATGACCTG
TTTTTGCTGCAAATTGTCCCGCTTCTGCTACATGTAGCAAAAAACGGTTC
GTCCACGGGACAAAAAATAAAAGACAGATCTTGCCGGAGACCTCGCCGGG
GTTTCGCCGGACACTTTGTAGCAAAAAGTTTGTCCTAATGTAGCAAAACT
GATTTTGCCAGAGACTTTTACTAGGAGACCTCGCTGGAGATATTGTAGCA
GAAACTTTGCCCTATTGTAGCAAAACTTGAAAATAGATGTAGCAAAAAAG
TTCAGCATCTGTAGCAAAAAAACGACTTCGCCGGAGACATCGCTGGAGAA
TTTCACCAGGGACCCCGTAGCAAAAACTCTGCTGCTATTGTAGCAAAACC
AGTAAAAGATTATAGCAAAAAAATCTGCTAATTTAGCAAAATCCAATTTC
GCCGGAGGCCTCGCTGGAGAACTATCAATGCCGCTCGCCGTAGGTAGTAA
CGCCGCTCGCGGCAGGTAGCAACGGCACCCTCCGTATGTAGCAAAGTAGC
ACCATGCAGCAGCAGCGGTGGGAGGCCCATGGCAGCACGTACCTTGCAGC
AACAGAGGTGATAGCAGCGCCATGGCAGTATGAGCAGGCGAGGGCTAAGT
GATGGGGATGGTGATCAGGACCGCAGTACCGGCTCTAGCGGAGGAGGCCG
ACGGCCTGCTGGACGAGGACACGCGCGGGCGGCTTAGGAGTGTGGTTCAT
GGCTAGGCTCAGGAAAATCGGTCGACGCAAGACGATTTTGGGGGCTAGAC
GGAGGAGGTCGTCGGGGAAGGAACCGGCAGAGCATGAGCCGGTGTCGGAA
GCCTATGGGGCGTGGGAAAGAACCTCACCACGGCAAGGAATCGGCGGGGG
TCGACACTGGCGCCGGGCAAGGGACCTCACCGTGTGGCCGCGGGGGCCTA
TAGGCGTGGCGGCGTGGGCCTATGGGGGCGGCAGCGGGAACCATCGGGGT
CGGCGACGGCGGCGCCGGTAGCCATGTGAGGTGGCTACTGAGGATGTGCG
GCAGTAGACGCACGACGGCGCAGGAGAAGCCCGTGCAGTAGATGCATCCT
AGGAAGAGGAAGCCATAAGGTGGGGCCGTATACAGGAGTGGGTTCGGTCA
CTGAGTAAAAGAAAAGAGGCCCGTACAAGAGCTACCCGCGTACGAGAGCG
ACCAGGGGGATCGATCGAATCTATCCCCCGGGGGAGCAGTATCATTTTCC
CATGAAATATGGAACGTTGGGAGTTGTATATGTGATGAAATATGCAACTT
GTATTTCCATGATGCCAAGGGCCAATGCATATACATGTAACACCTTATAT
AACATGGAAAATACACACTAATACGCCTACTCAAACTCATGGCGGGTCAG
AAACACTGAGTTTGGAGAGGTAAAAGTTGTGTTGTCCTCTGGTGTGGGTC
AGCAACCAACTGATTCCTGCACACGGCGCGACTGAAGGAAGCAACGACAC
ACATATGCTTGGTGAGCTCGTGCTTCACAGGGTCGCGTCCAGTGCTGATG
GTACCTATATTGTCTGACAAGAGGGGCCGATGTGGTCACAGAAGCACCAA
AATCCTCAAGCAACCACCATACCCAAGTCAGCTCAGTCTTGAAAAGATCC
ATAGCAACTAAGCCTATGCACTCTAACGGGAAACTGCAGTATGTTTCTTT
GTTTTCCAGGCAATGAAAGATCCACGAAGAAAAATAAGTAAGCAGAAAGG
GACCGATGATCCAAAAATCACAAGCCCAAGTAGCATCATAAGGGCACATA
CAATGCAAGATGCTTAGGGAAGCTGCTTAGAATAATAAGCCGTTTTTTGT
CAAGCACTGGTGCTTATTTATACTAGATAGATGCCTAACTAGGCACTTCT
CCTATACAAATAAGCACTGGTGCTTAAGAAAAGATTGGTTTATTTCTGTA
TGCACTCATCTAAGCACCTTGCATTGTACAATGGCCTAATAAGCCTGAAG
TTATAACAAACTGGAGCGTTGAAAGAATGAGGAGAGATAATCCTGCGAAG
ATATCATGGAACTCGAAGGAGGTGACTGAAGTGAACATGAGCGGAGTAGA
AACAAACTGACTAAGAAAGGACATGTCGCATGTAATTGCGGCATGGCCAG
TAATTAATTGGTTCCTTCAATAATATTTATGGCACCAACATCCAGGGTTG
AAAAACATAATTATCACAGGAAATGCTAATTAAATATTCAGTTGGAAACA
AAGGAAACATAATTCACAAGTCTTTAATGTGATGGATGGATGGATAGAAA
TATGAGTTTATATAAAAAAAAAACAACTCACATTTTTTTATGGCGGTATA
GAAATGCAATTTTCAAAATAAATAATGGATCAAAATATATTTTTACTCCG
AAGGTGTATACATTTTCCATATGACAGTTTGAATTCATTTTCTGTTCTTT
TGTATGTTTGTGGTATCAATCCTAATTTTCTCTATATTTGGTGGCGGTAA
ACAATTTTCAGAGTTCATTTTTTATTGGATACCACACGTTATTATCGTTT
TTATTTTTAAAGTTTACTATTTTAGAAGTACTAGATTTTCGCCCATATTT
TATTAGTGAAATCATAGTTCACAACATTAGTAATACAAGGTGTTAGTTTA
CCCTAGTTTAATTTAAACTTATGTATATATGAAATCTGAATATGTGCAGA
AAGAACTAGATGTACTGCTGTAACGAATTGTCTTGTATCGTTGGCAGGTT
AGCAGTGAGATTGCTTTTGATCATCTAAAAGATATTGGGATAAAGATTAT
TAGAAAATGTGATGGTTTGCCACTTGCTATTAAAGTGATGGGAGGACTTC
TAAGCACAAGGCGCCCAAGTGAACTTGAGTGGGAGAATGTTCTGAAAAAG
AATCTTGAATGGAAAGAAAATGGGTTGCATGATGAACTGAACTTCTCAGT
ACACTTGAGCTACGATGATTTAAATCCAGAGTTGAAACAATGCTTTCTAT
ACTACTTACTTTTTGCTAAGGGTTCGGCACCTAGCTTGGATGAAGTTGTT
AGCATGTGGATCAGTGAAGGGTTTATTCAAGGTGATGGGAGGTCAGAATC
AGTCGAACTAGATCTAGAAGAAATAGGACAAGACTATCACCGAGAGTTGG
TCGCTAGGAATCTTTTGGAGGCCGACAATCCAATTTGGAGAACATGGTGT
TACGACATGCATGATGTTGTCCGTTCTTTTGCTCAGTTTGTGGCTAGTGA
AGAAGCACTTGTGGTTCGAAAGGAGCAAAATGACATTAGAAATCTTCCCT
TAGTTAACCAAAAATTACGGCGTCTGTCTATAACACTACAAGATTCGATA
CTAGAGTGGAGCATCCTAGAAAATCTAGAATCATTGAGAACATTACTGAT
AAACTGTAGCACTATGCCTAGTGGTGGTTCATTGGCTAGTTTTGTCAGTT
TACGGGTACTGAGTATAGAATCTGGCGTGTCTGATGTGATCCTGGATTCT
GTGTGTCAGTTGAGGCATCTAAGGTACCTGAGACTCAAAGGGGCAGATAT
ATCTAGGCTTCCAAAAGACTTCCATAAGATGAAGTTCCTTGAGCACATAG
ATCTCACCAACTGTATAAGGCTTAACAAGCTTCCCGACAACATTACGGAA
CTAAAGAGTTTGAGATATCTGGCGTTAGATGGGTGCAATGTTGATATTGT
ACCAAGGGGGTTTGGTGGCTTCAAAAAAATGAGTTCAATTTTTTGGTTCC
CAACAAAGATGGATGGGGATTGGTGCAGTTTAGAAGAGTTAGGGCCTCTT
TGTCATCTTAGGGATCTTTCAATACAATATCTAGAAAATGTGCCCGATAG
TTCAATTGCTGCAAGGGCTGTGATGGGCAACAAGAAGCATTTATTGTATT
TGGAATTGAGCTGTTACAGAGATGAGAAGGGAGAGATGGAAAAGATGGTG
GAACAAACCGAGGAAGAGAAGAAACCCAGAGGGAAGCAAATTGAGGAGGG
GGAGAAGGAAGGAGAGGAAAAAACTACAAGAGAGGACGAAGAAGGGGAGG
AACAATCTGCCGAGGACGAGGAGAAGGAAGGAAAGGAGGAAACTTCAGAA
GAGGAGGAGCAGCGAATTGAGACAGTATTCGATGAGCTCTGCCCTCCACC
TTGCTTGGAGGATCTATTCATGACAAGATACTTTGGTCGTCGACTACCAA
ATTGGATGCAAGCTCCAGCAGCATCGTCCTTTAAGAGCTTGAGGACTATT
GTGCTAGTAGACCTGACCTGCTGCAACCAACTTCCCAATGGCTTGTGTGG
GATGCTAAATTTGGATGTGATGGAAATCCGCCGAGCTCCAGCCATTGAGC
TTATCGGTCCTGATTTTCAAAGCCGGGCAAGTAGAGATGGAGGTGCCATT
GTTACTAGCCCATTCCCAAAACTGAGAGTATTAAGCATGGGAGATTTGTC
TCTATGGAAGAAGTGGGACTGGGAGGAGGAGGGGCAGGGTGAAGCCATGG
CCATGCCTGCCTTGGAGCATCTCATGATTATAAACTGCAGGCTGACACAC
CTTCCCCTGGGACTTGCTAACCACAAGAGGTGTAATTTGAGAACCCTGCT
CCTAGAACGTCTCATCGTCCTGGCATCTGTGGAGAATTTCCCTTCGGTTG
TTACTTTCAAAGTGCTCTCCTGCCCCAAGATCAAGAAGATCGGCGGCTTC
TCCAAGTTGCGGAAGATCGTCATCGAAGGTTGCCTGCAGCTCAGGTTGCT
GGAGGGTGTCCCCGTGCTCTCTAGCATGGAGCTGGATGATGAGACATGGG
AGATTACAGGTACGCCTGCAAGGTGTACACCCAAGGTATATCAAGTTGGA
ATGAAGCCTCAGCTTCCTGAAAATTTCACTGTTACCAGATAG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.