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GrainGenes Sequence Report: AA020403

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Sequence
AA020403
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA020403
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
GGAACTTTAAAAAGTACTGGTCCTAGAGAAATTATAAATTCTGAGGAGTG
AAGAGGTCGCCGTCTTCCAGAGCGACGTCTGCTAGCCTGGTTGGTAGATA
GTATAAAAGACGCACGCCGTCCTCAGACTCATTCGATCAGCGATCCCCGG
CCCCCACCACGCATCCACACGCACCACCGCCGCTGCCGTCCCAAATTGCA
CAAACGATCCCAGCTAGCTAGCTCCACCCCTCTCGCTCGCGCGCCGCCCC
AAACTCCGGCGCAGATCGGCGCCCCGGGGCTGAACTAATGGAGGCGGCAC
GGGATGTCTCCATGGACATGTTTCGAGGATCGCTTGATGCCGCTGCTAGC
GTCGGAAGGTACGTGTGCATAAACCACGAGGCTTTTCTTCTTCTTCTTCT
TTTGGTGTTGGTGTTGCCCCCTGCCATGTTTCCCCCTCCGCGCCTGGCGC
GCCGTCCGTGACGCCATCGTCCCCGCCTTGACGCGCTGATCGTGCGTCGC
CTCGTTGCTTGCCGCCTAGGGCCTTTACTTTGATGCGCCACCGTCCCTTC
CCTCCTGCCCAGCACGCTGCTCTTCCGCCGGTCCGAAATCCACAGGGCCG
CCACCGCTCCCGGAGCCGCCCGACTGCCCCCATTGACACGCAGATCGCGC
GCCTGGAGCCTTGACGCGCCGCCGCCCCTTCCCTCCTGCCCAGCACACTG
CTCTTCGGGCGGTCCGAAATCCGCAGTGCCGCCAGCCACCCCGGCAGGAG
ACCAAAGGTGCGAGGCGGAGCACGCGTCCTTGACGGACGCGCCCTGCTCC
GCGGCGGTTTTACGCGTATGTCCCTGGCGTTGTGCCGCCCAGCACGTCGC
TGAAAGCGCCTGTCCCGACGCCGGAATGCGCTTGCCCAACACGAGCGCCA
AGGTGCACGCCCACGACGTGACGGGTCGCCTCGCCGTCAGCCACCAGCCT
CTCGATCATGGCGCACCCGGCCGCCGGACTATCGCCTCGCCGTGCGCTTG
TTCCCCGACGAGGTGCGCGACGGCGACTCAGAACGGAGGCCATCGGCCGG
GACAGCCGAGGCGACAGCGGCAGCGCTATGGCGGCCAAACTGGACGCCGC
TGCGCGCCCGGCTCCGCAGCACCGCGCGCGTGTGGTCGGCTCGATCGATG
TCGCTGCTGGAGCAGGCGGACAGCCAGTGGGTCGAGCCGACGAGGACGAA
GATGATGACGCCGGCGGGTATCGCGGATGAGGAGTACGCACGGCAAGTCG
GCAAGGGGCGGGAAGAGGAGGAGATGCTGCACCGGTGCAGGCGCGTGCTG
CGTGTGCACAGGTGCGCGCACCTGGCCGCCCCGCTTGTCCTCCGATCGAT
CGACGAGGTGCCGGTGTGTGTGTGTGGTGTGAACCGTATTCCGTGTGAAC
GCGCGGGTGGGGCCACTCGGACGAAGGATGGTCGCCGTCGTTACCTTGAC
TGGCCGCACTGCGTTGAGCTGGACGGTACCATGCCTAAACTCGGGCCACA
GATACTTCGACGTGGCGACACTGACATGTGGGTGCCACGTAGTGCGACCC
CGCCGACTGTCAGTTTATCAACACCAGCTGACGCCAACGTACAACTACCT
ACTCCCACGTCACAACTAGACGCCGCCAAGTCAACTTCCGTGTCCCGTAG
TGACTGGCAGATGCCGTGGTGTGAGCTTCCGCGAAGTTTCCGGGAAGTTT
CCTCCAGACGCTGCCCCATGTCGCTTGTGGCCAAGTCTTAAATGTTTAAG
AGTTATAAATAGGCAGAGTTGTTCGGTGGCTAGATTCCCGCATAATTTAA
TCCGTGTACTCGCTCCATTTTATAATACTCGCTCCTGTCCGCAAATAATT
GTATTTCTAGGTTTGTTCTAAATTAAAATTAGTAAAGTTTGATTAATTTT
ATAAGAAGCGTGACAATATGTATGACTCTAAATTGGTAATAGTAGATATG
TTTTCAAATTTAATTTTATAATATGTCAATTTGATTTAATATCTCTTGTT
ATATTTATATATAATTGGTCAAATTTGATAAATTTTGACTTAGGCAAAAG
CTAGAAGTACACTTATTTACGGACGGAGGAAGTATGATAGTACTAAGCGT
TTTCCGGAGGATAATTTCCTAAAATTACCGGGTCCTCCTGCTTACAGGTG
TCCCAAAATGCCTCAGATTCCCATTTTTGCTATAAACATACCAATTTTTG
CTACAAATAGTCCCGCTTTTGCTACATGTAGTAGAAAACTGTTCGGTCTA
AAAATAGAAAAATAGACTAGGCCTCGCCGGAGATTTCGCCGGAGACCTCG
CCGGCGGCCGTGTAACAAAAAAGTTGTGCTAATGTAGCATATCCGACCTC
GCCGGAGGCTTTCGTCGATAGACCTCACCGAAGACCGTGTAGCAAAAACA
TTACGCTATTATAGCAAAACCATAAAACGGTGGTAACAAACAAAAAGTGC
TGATGTAGCAAAACCTCACCGGAGACTTCCGCCAGGAGACTTTCTCGAAC
ACCTCGTAGCAAAAACATTGAAGTATTATAGAAAAAACATGGAACGGTTA
TAGCAAAAATATTATCCTAAGATAGCAAAACTGAATTTGTTGAAGACATC
ACCGGAGACCTGTCGAAGATATTGTAGCGGAACTATAGAATTGTGTAGCG
AAACTACAGAACGGTGGTAGCAACTCAGACGGAGCGTAAATCATGAATAG
TGGGCCTGTAGCAACTCTCGCTGGAGATCGGCATTGTAGTGGGAACCCGA
CATGACAGTTCATGGCGAGCAGCGAGCTTGCGCATGGCAACGCACGCGGG
GTGACCATGCGGGCGCGGCGGCGAGCACGCAGGAAGGTAAGCCAATAGCA
CGGCAGCTGACCTCAGCGGCGAGACCTCATTCTGGGACGGCACAGGCGTT
CTTGCAGGTGTGGAGGCGGCGACGGGCGAGCTCGCGAGACCTCTTCGACG
GTTGAGGCGGAGGGAGCGGCCAACGGCAGAGAGAGCTGGAGTCTCCGGCG
ACTAGCGGCAGTAAAGGCCGGCGGTAGGGGCGGCGGCTGGTGTGGCAGAG
CAAGCTTTAGGCGAGGACGAGATGTGCCGGGGGATTTTTTTTCATCTCGG
TGAAAGGATAAGGCGTTCACAGATAAGATAGAACGTGGGCAGGGCCCACC
CTCATGCTGTGCGGGACGAAGACCCGGGGGATGAATCCCTCGGGGGAGGC
CAATCATTTCCCTTTATAATACAAATTTTTTTAGCTTTGTAAAATAAGTG
TATTTTTAGGCCTTGATTATTTCTCTCATATTTTTATCCACTAAAGTTTT
CAGAATATATGGAATTTGATGTCCACCCAATACTCTTCAAACCCCTAAAA
TACTCTTTTCTAAATATACTCTACCTTAGAAGAGAGTTTTTAATCTAGAC
AAAAATATAAAGGAATCATAGGGATATGCTGGAATTATCCCAGCCAGACC
CAGCATAGGACTCCGGTATTTTGCGGGATTTGGAATAATCCCTTACTAGA
CCCGTATATACACTAGCGAAGTAAACAAGACCTTAGTGTAGGTTCACTCC
TGGTCACACACTAAAAATAGTTTATACACTCTTTTTTATATTATGAAATA
GAGGAAGTACTTATGATTGGACTCGATTTAGCCTAGAATCAGGTTTACCA
TCGAATTTGAGTTGACCTAGACGACACGTGAACACAGATCCCACTACACG
AGAGCAGCTAGCTTGAAAACTTTTAAGAACCGACAGGCCAGTGCTTAACG
ATGGCTTGCTTCACAAATTAATAGCCAGGCCAATCTTAGAGCATCTTCAC
TCTGGTTTCGAGGACACCGTTTCCAGAGCGATTTTTTCGTCTGGATGCCG
AAAATTGGCCCAGCCGCGTCCGAATTTAGGCCAACTTTAGTCCGAAATTC
CCATGCCGATCCCGAGGCGCTGGGAACGCCCTATGAACGCCGGAAGAAGC
GAAAACGGGTGTGGGCCAACCTTGTCGGCGAGACAACCTCATTCCCCACT
TCCACTCGCCTCCCCTGCGACGAAGAGCTCCCCCGGATGCCATGTCGACA
TGCCTTCGCCGGCGAAGCTTCACCACACCGAGCCGTATCCACACCTGTAG
CTAGGCCCGCCGCCATCGCCGCCCTTTCCCCTCGGCCTACACCATCTTTC
GCCACCAAGCTTCGATGTAGCTCGGCTTCGCTTCGAGCTCCCGCCACCTC
GCCCTCCAACTGTTCGGTGTTTTGCCAGTTCGGCCATGGACTCCGACAAC
GAGGAGATGTTCGCCGTGTTGCTGGAGGAGGAGAACGCCACAACCGTCGA
AGATGCAGAGCATATGCAGATCCTCGCCTCTCTCGACCGGTTGTACATGC
AGACTACAACGCCAAACCGTGGAAGTTCGGTGAAGGGTCGCCGGAAGTGC
AAAGCAAGGCAGAGGATGGAGGGCTACTGCTTACTGTACGCCGACTACTT
CGTCGACGAGCCGCTGCATGAAGAGACTAGTACAACCCCTATTTCGTATG
CAAGAAGGACTGCACCAGCATGGTTGGGTTTTCCTCACTGTAGAAGTGCA
TAATGGCGATGAGGTTGCTTGCATATGGAGCGTCGGGTGATAGTGCCGAT
GACTATATCTGCATGGCTGAGTCCACCGCCATCGATTGCTTGTATAGGCT
CTGTAAGGCAATGATTGCAGTGTTTGGGACAGTACTTGAGAACACCCACT
GTTGAAGACACTGCTTGGATCCTCGCAGTCAAAGAAAGTAGATGATTTCC
AAGGATTCTTGGAAGCATAGACTGTATGCGTTGGCAGTGGAAGAACTGTC
CATTTGCATGGCAGGAAATGTACAAAAGGCCATAAAGGAGATTGCACTGT
GATACTCGAGGCAGTTGCTACACATGATCTTTGGATCTGGCACTCCTTCT
TTGGTATGGCAGGATCGAACAACGACATCAACGTCCTCAACTCCTCAAAT
GTCTTCACCAAGCTTGTTGAGGGTCATTCTCCCTCTATGGACTTTGAGAT
CAACGAGCACCACTACAACAAGGGATACTATCTTGCAGATGGCATCTATC
CAAGATGGCCAACATTTGTGAAGACTATCTCAAACCCATTGCTCCCCAAA
CATGCTCAGTTTGCCAAGGAACAAGAAGCTTGCAGGAAGGACGTGGATCG
GACATTTGGTGTGCTCCAACCGAGGTTTGCAGTTGTTCGGTTTCCTGCTC
TGACCTGGTCAAAAGATCAGATGTGGGAAGTGATGAACTGTTGTGTGACT
TTGCACAACATGATCATTGAGGATGAGAGGAAGGACCCATCGAGTTTGGT
CGAACAGAACGAGCCATACTACAGGCATGGACCTCTTGTAGATCCTGATA
ATCAGGTGCTTCCAACCTGGGCTGCCTTCATCGCCATGCGTCAGGATATC
CAAGATCCAGTAGTGCATCAACAGCTGCAGGATGATCTGGTTGATCACCT
ATGGATACACAGGGGCAACACGTAGATGCGATCATAAACTTGCCGAACTA
GGCCGAACTATGTTGTATTGTCATTGTATGCCGAACTATGTTTAATTTTA
TGCTAAACTATGTTAAATTAGTGCTGAACTAGGTTGAACTTTGCCATGTA
TTCATATTATGCCGAACTGTGCCGAAAACTAGTTGATTTTGAGCCGAATT
TGGATGGAAAAAAGGCGACCTAAGAACGCGAGTGGAAAAAATGGTTGTTT
CCAGGCCGAAAAATAGCTTCGACCGGCGCTATTTTGGTATCGATTTCGGT
CTAGATACGCCCAACAAGCGGAGATGCTCTTAACGTCACATTGCTTTCAC
TAATTTCATTTATCGACAAATCGATCATTTCAGAAACTACATCCGTGTGA
ACTTTCATTGTGGTTTCCGTGGATACCCGTCACAAACAATAATTTAAGAG
CAGCACTAACAGATCCTTTGAAACCATCAAACTGTTAAAATTTTAGCGAT
TTTAGGCCTAAAATTTTGTCCAGAGAGCACTATACAAGGCACAAATCAGC
CGGAGTCCCCACCATCGCCCCGCCGTACAACCTCCTTGAGTCACGACTCT
GGTAAAATCGTTCACCGCCGAGCTTCAATTTTGACCAAGTCTTTGCCAAT
TTCCTTCGAGTCGCCTCGGTAGGAACCGATTCCGGCAAGCTGCCAAGTTT
CGGAGGATGAATTCGTGGCTAGTGCTCGCCATTTTGTGAGGCTACACAGG
ACAGGCAAGAGGCACATGCGAGCAACACAGGCGACCCAATAGCCTGACCA
AACAGCTGATGTTTCGAGCAACATTATCAAGTTTAAAAAAGGGAGACGCG
ATAAAAATATGGTTCGCTGGAGACATTGACATCACGGACCCACGAGCTTT
AAAAGACTTCGGTGGCATCGAGCAAAGTCAAAATCATGCGAGGAATCAAA
AATCTAAGATCTACCACGGCCTCGCCGAGGTTATGTCACGTTTCTAATGA
TTCTATGGCAGTAGGGTGCCTCGAAAACAAAAAAAGATTTTCATCTGCCA
TAGGAAAAATAGTGAAGACGTGGCATGTGCACGACCAATCCGCTGCGGAT
GGTGACTTTTCTTATAGTGATTATATCTTCTAAAACCATTGCTATACTTT
GAGAGTTGGATTGAGGTTTCCGAGAATATCAAATATTAAGGCGAAGTCTA
CTATGAGAAACCACTATTCAGAAGACATTGAAGGCATCGACTATGGTATA
GTTTACGGAGTTGAAGATGAAGATGGAGAAGAAGAAGTAGAAGATCAGAC
ATGATAGAATAAAATAGATGAGGAAGCAACATAGGATTACTTCAAATAAG
TTGTTGAGATCTAATGGTACTAAGCTCAGTGGTACCATTGATTTTCAAGA
TAGATAGTTTGGCTTTCCATTCAACTGTGAATCCTTATTGAAGCGAGGAA
GATCTCAAATCTTCTGTATATTGCTGGTTGTTGTTAAGAAACATGTAAAA
TTTACGGATCATAATGTTTCTGTTGTACCATTTCGAGAGATATACTATTT
GTGAATCGATACTTCATGAGTGTTATATCAATGATTTGTCCACTACAACA
TGCAGTGGTGTACTGAGTTGCCGCAAGGATGACGTCGACTCACATACATA
GTCATTGTCCTCTTCTGCTCCATCCACAAGCGGCAGCCGACACCGTTTCG
CTTGGCCTCCCACTACGCTAGACTACAACTACATGTCGACCCGCTCTATG
ATCCAGGTATGAATCGAGCCTGTTTGGTTGGGTTTAAATATATCTTTTAG
AGTTCGGCTTATAAGTCACAAAAACACCGAAATAGATACTTTTGGTTTTG
GCTTTTACCTTTTAACTGGATATAGTAGTATAATGGGAGTTATCGAAAGC
AAGGACATCAAAACGTTCAAGTGGTCAATTGCATCATACTCCAAAGAATC
GGAGTTGTCCCCATCAACCTCATTATCTTCACCACCATCAGGCTGAGATT
GAGTAACCTCGGCGCCCACCACATCACCATCAACATCTTCATTATCACAA
ATGAAGAGATCTTGATCTAACTCATCTACATTTTGTGGTGCACGTCTAGT
ATAGTAATTCCCACCCCTAGGTTGATTGCGACGAAAAAGTGATGATGATG
TAGTGGTAGCAGCATCTACTTGGTCCCATGTGAGATCATCCTCCTCGTGC
ACTCGCTGAACCTGAACTACTTCGGCGTCCTTGCCAACCCACTCATTGTC
CCATTGAAAATTTTCTAGGAAGAGAGGGTTAACTTTATTACCTTCATGGT
GAAGCCTAGCAAATCTCTCCATCTTGCTATTGAAAGATATGTAGGAAATA
TCATCCAACTTCGGATGTCCCAACTTGTTTCTCTTCTTGTCGTGGATCTG
ATATTAACATGAAACAACAACCCATAATTGAACCACTTGCTAATTGCTAG
AATTCTGAAATTAGAAACAGCCAAAAGAGACTTTTTCATTCACCCTCTCA
AAGGTGATCCAATGGCGCTCACAAACAAAGGCTGATACACATAGACCGAC
TATACACCTTGCAACCTTAGTGAGTGGCAATGCTTGGCCACCACCATTTT
ACTTCTACCAATCAACTAAAAAAATGGGAGCAGCCATATATCAAACATGA
GACATGTATAACTTCAAGATGAAATCAATGAATAAATGATAAAGAAACTT
ACGTGGTCTTTCTTTTCCTTCCATTGATAGCTACGTTGGTATCGAAGCAA
TCACCATGAACTTGTTGGTATTCATCAGCTAGCACATCAATAGTTGCAAT
CATATCCTCATCACCATCCATCATTTTTGTCACCACTTGATTAAATGTCA
TCCTCAAGGTTTGTGCTTAGTCAGGATCATTTTCCATCATGTCAAAGAAC
CGGCCAGGATTAAAGAACAAAGCATCCCCATGTAACTTATGCATCATTTG
ATCATCCCAACATTTCCTATAAATCTGCTTTAACTTGTCCAACAATGGCA
GCTTTCTTGAGAAGCTTTCATTGAGTTTCTTGTTGCATATGTCCATGGCT
GCTGTAAGCTACGACATTGCTGGATTCTCATCACCATCAACTAGCCTCAA
TACAATTAGAACAGGGTGTGATGCTCTTATGCAATCTTCCACAACATTCC
AAAATGTCATTGACATCATAACCTCGTACACATGCTTTCCTGTTTCAGTT
TTTGCTAACTTGTTCTTTGTCCAAAAGTCATTGTAGAGGGGACGCTGGAG
AGGAAGGAGCGAAGAAACACAAGGAGGAGGAGCAGAGCTGCAGAGGGGGT
GTCGGGATAGGGAGGAACAAAGGGGGGCAGCACATGAGAGGAAGAGCACC
GGAGCATAGGTAG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.