Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA043452

[Submit comment/correction]

Sequence	AA043452
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA043452
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	CTCACAGGCCGGCAGTGGAGCCTCCTCTCCACTCCCCTCCCCTCTCCTCC AATGGCGACACCGCCCAAACCCCTCCACGCCTCCTTCCTCTGCTCCCTCG CGCTCGCGCTCCTCCGCGCCGGCCGCCTCTCCGCGGCATCCCACGTCGCC TCCTCCCTCCACGCCGCCTCCCCTCCCGCGGCCCTCCTCCGCCGCCTCAT CCCGGCGCTCGCCTCCTCGGGCCTCGCCGCCGCCGCCGTCCGCTTCCGCC CCGTCCCAGGAGACCCGCTCACCCTCAACTCCATCCTCCTCTCCCACTGC GCCCTCCGCTCGCTCCGCCCCGCGCTGGCCCTCCTCCGCTCCTCCGACTC CGTCGACACCGTCAGCTACAACATCGTCATCTCGGGCCTTTCCGAGCACG GCGGGGGCCTCGCCCCGGCCCTGCTCGCCGAGATGTGCAAGCGCGGGGTC CCGTTCGACGCGGTCACGGTCAACGCGGCGCTCGTGGGGCTCTGCAGGGA CGGCCAGGTGGAGGGGGCGGCGGCGCTGGCCGAGATGATGGTGAGAGGCG GGGGCATCGAGAGACTGGATGTTGTGGGCTGGAATGCTCTGATCGATGGG TACTGTAAGGCGGGAGACATGGCGGCGGCATTGGCAACGGCCGAGATGAT GAGGACACAAGGAGTGGGGGTCGATGTCGTCGGGTACAACAGCTTGGTTG CTGGGCTCTGCCGTGCCGGCGAGGTCGACGCTGCGCGGGACATGCTGGGT ACGATGAAGGGCGACGGGGTGGAGCCGAACGTGGTGACGTACACGACGTT CATCGCGGAGTGCTGTAGGAGGAAGGCGATCGACGACGCCTTCAGTCTGT ATGAGGAAATGGTGAGGATGGGCGTCCTGCCGGATGTGGTCACACTCAGC GCTCTTGTCGACGGGCTTTCCAGGGTCGGGCGGTTCTCGGAGGCGTATGC GCTTTTCAGGGAGATGGAGAAGATTGGTGCGCCGCCGAACCATGTTACAT ACTGTACGCTGATTGATTCGTTGGCGAAAGCGCAGAGGGGCAGTGAGTCG CTCGTTTTGTTGGGGGAGGTGGTCTCCAGAGGCGTTGTCATGGACTTGGT CATGTATACAGCTCTGATGGACTGGTTGGGCAAGGAAGGGAAGATTGATG AAGTGAAGGACATGTTTCGGCATGCTCTGGCGGATAATCATACTCCCAAT GGCGTTACTTACACCGTGCTGATCGATGCACTATGCAGAGCTGGTAATGT TGATGGGGCAGAGCAGGTGTTGCTGGAAATGGAGGAGAAGTCTATTAGTC CAAATGTTGTTACATTCTCATCGATCATCAATGGCCTTGTTAAACAAGGA TGGCTTGCCAAGGCAACTGATTACATGAGAAAGATGAAGGAAAGGGGCAT TGATCCAAATGTCGTGACCTATGGAACGGTTATCGATGGCTTCTTCAAGT GCCAGGGGCAAGAAGCAGCTCTTGACATGTACCATGAAATGTCATGTGAT GGTGTGGAGGCAAATAAATTTGTTGTAGATTCGTTGGTCAATGGCCTGGT GAAGAATGGGAAAATAGAGGAAGCGGAAGCATTGTTTAGAGATATGAATG ACCGAGGTATGTTGCTAGACCATGTCAACTATACCACTTTAATAGACGGG CTTTTTAAAACCGGTAACATGCCGGCTGCTTTCAAGGTTGGTCAGGAGTT GACGGAGAGAAACTTGTTACCTGATGCTGTTGTCTATAATGTGTTTGTCA ACTGCCTTTGCATGCTCAGGAAATCTAAGGAGGCAGAATCATTTTTGAAA GAGATGCAAAATACAGGCTTAAGACCTGACCAAGTGACATATAACACTAT GATCGCTGCACAGTGCAGGGAAGGGAAGACTGCCAAAGCTCTAAAACTCC TTAATGAAATGAAGAGGAGTTCTATAAAGCCAAACCTCATTACGTACAAT ACACTTATTGCGGGTCTTTTTGAGGCTGGGGCTGTTGAAAAGGCAAAGTA TTTGTTAAACGAGATGTCTTCTTCTGGATTCTCTCCGACCTCTCTGACTC ACCGAAAGGTTCTCGAAGCATGCTCCCAAAGTGGGAGACCGGCCGTGATT TTGGAAATTCATGAATGGATGATGAGTGCTGGCCTTTGTGCTGATATCAC TGTCTATAATACACTGGTGCGTGTTTTGTGTTACCATGGAATGACAAGGA AAGCTGCGGTTGTCCTGGAAGAAATGTCAGGAAGAGGAATTGCCCTAGAC ACCATCACGTTTAATGCTCTAATCCTTGGTCATTTTAAGAGCAGCCATGT CGACAATGCATTTGCTACTTACGATCAGATGCTTCGCCATGGGGTCTCAC CTAACATAGCTACATTCAACACGCTCTTGGGTGGACTTGAGTCCGCTGGA AGAATTGGAGAAGCGGACAAGGTGCTGAACGAGATGAAGAAAAGGAGCAT TGAACCCAGCAATCTGACTTATGACATACTGGTCACAGGATATGCAAAAC AAAGCAATAAAGTGGAAGCAATGCGTTTGTATTGTGAGATGGTGGGTAGA GGCTTTCTTCCGAAAGTAAGCACATATAATGCACTCATAAGCGACTTCGC TAAAGTGGGAATGATGAGTCAAGCTAAGGAGTTGCTCAACGAAATGGAAA AGAGGGGTGTTCTACCCACATCCTGCACTTACGATATTCTTGTGAGTGGA TGGTCAAAGCTTAAAAATGGAACTGAGGTGAGAACATTTCTCAAAGATAT GAAGGAAAAAGGATTCCGTCCATCAAAAGGCACTATTAATTTTATATGCA GAGCATTTTCCAAGCCAGGGATGAACTGGGAAGCTCGACGTTTGCTTAAG AAACTATATCAGGTTTAGAGAATGTCAACTGTTGATGATGTCCTGATGGA GACTGTTCTTAGTTTGACATTACAACCACAGTCAGGGTGCTTATTGTTTA AGTGTCTTATCCTTCCGCAGCTCGCAACACCCCATCAAACGTTACAGGAG GCTACTTGCTGAGTTAATCCCCGGGTCACCTGTAAGTGTCTGGTTCTCTG TTCAGTCGACGTCTAATTTAACCAGTTCAATGGTAATGCGGTTGTGTTTT TTTTATCTATAAGTAGTTAACAGCTTCCTTGCATGCCCTGCATGATGGTG CTGCTTCAGTAGTAAGTGTGGTGCTGCTTCAATAGTAATTGTAGTGCTGC TTATCTCGCAAAATTTACTTTTTCAGGATGACCCGTCAAATGAGTGGAAG ATCATGAATTATGTTAAAAATATCCCCACACACTCCAAAGGCATGTGATG TTGCCATTTTGTTTCCTTTTATTTGTGTTGGTAGTTGCTAAAATATTCAT TGGCTGTATGTGCTTAATCGTTCCATGTTTCCCTTCACTGCATGCTTTTC AGATTCTCACATTTCTGTAACAGAAGAGTCACAAGGAGCTGCACCCTGCT CATGTGAATGTTGTCAAAATTAGTATCAGTTTATCAGTGAAGAGCTACTC TTCATTTGTAATGAGCAGATGTGAGTTTTTCAATTCTTGGCTATGAATCG TGTTTTCCTTTTGTCGCTTTACCGTGTGCATATCATGATAGCATGTTTTG CAAGCAGCCTGGTAAGAACCATTATTGAACTTCGGAAAAACATGCAGCAG ATGTTTTTGTTCTTGAATTTCAAAATTCAGCGACATTCATTTACAACCAG GTGATTATTATGTAAAGTTGGATATGCTTTGTGTTCTGAACATTCATATT CGTGGTTGTTTTGTGCTTCACTCTGTTCTGATCATCAAAGACTGCTAGTT TTGGAATTGACGCCTGATTGATAGGATCATGGAGTTGAATGCATCTCTCA TGCGAAACTTGCCACTTCTCTATTTGTGTAGGATCTGAAGAAAGTGAGGC TTTTGATGGAGAAAACCAGCGAGGCTGAGGAGGTAGCTTGTGGATGCACC ATGAGGGGCATATTACTGCCGCACTGCCCTGGCCATGCTTCTTCTAGTTA TTGAAGACAAGATATTGGTGATGTGGTTGTGGTGATAAAGTGCATCAGGA CAAAGAGATTGATTGACAGATCTATTGTGGATGAGAATGAGATTGTGTCA ATTAGAGATGCCTCAGTTAGACATGTCAACAGGAGGAGAAAGATCCTGCT CTGTGAGATTCAGCTACTCTACTTAGAGTTGACAGCAGAAGCCTGCCTCT ACATTAGGGTGGCAAGGTAATGCTGTTCATTGTTTTACGCTTAAATGGCT TGGCGAGCACAACTATTTCTGAGAGCTGTACTACATGATGGAAGCAAGTA CTTTTTTCCTTCCACAATTTTCATTCCATGAAATGAGTTACTACGACTGC CATGTACTTGAGTATTTTGAATCTGTAGTTTAAGGCCCATACCTATTTTC TATTCAAAGTACACATCTGATCCTCTGAATTTTTAATTTTCCTCACACAT GAGATGGCTTACTATGGCTGTGCTGGAAGTTAGTATTCAGTGTGTGTAGT TTGAGGTTTATACCTCTTTTAGAACGAAATTCTGAATATTCATGATACAT GAAAGCAGTTACATACTTACAGTTACTATTATGTTCCTTGAGTACTCACT GTGTAGTTCGAGATATACCACCTTAGAAAAGGCTGCTCTGAATTTTCTTA AATTTGGTCGATGCAATATTGTCTTAATCATGCTTGCCTAATAAGCTGTG TAAAGCTGCAGCTTATCTATAGAAATACTTGTTCTGATCAACCTTCCTTG CGCAGGTTGGAGATATAAATATCATAAAGATACTTCTGATGGGTAGCTCA GACAAACAGGAGCCAAGGTGCTCTTCTTCGAAGTTCTGCTCCATTAACAG CTGAATTAGTTATTTTTACTTTTTCCAGATGTCCCTTAGTTGCCTTACCT CTTTGTGCAGGATTGTGTGGCTCCTGCTGAAGAATGGTGCCAGAATTTTC CTGGGGAACAAACTAGGTCTCACACCAGTGCACGCTGCTGCAGCTAAGTT TATGATGCTGCTTCAGGTAGCCTTTTGTTACTTTCTTTCCAAGTGCTGAA TAACATTATTATGACTAATTGGTATTGGTTTCTTGGCTCTGTAAGTTCAA TTCTGCTTCCTCAGCCTAACAGCACCCACCCAAGCCTCCTCCGCCTAACA ACTCCCAGCATCGAAGGTGCATTTTTATCCTTAAGATATCCAAGTCCCGC GAACACGACGTGAAGGTGCATTTTTATCCTTAAGATATCCAAGTCCCGCG AACACGACGTGAAGGTGCATTTTTTTTCTTAGAATCACACGACATGTAGA TAAAAAGAGAATATGTGCTTGTTAAAGGGCTGACCCAACAACAAACAGCC TGTAGGCGATACACTGCTTTTACACACAATAACCAGTAAATAGCGTCTGC AGGAACAGTCTGATAGAGTAGCTGAGCTGCCATTTATGGGCTTTGCTTTT TATTGCCACCTTAAGTCCTCAACAGTTTTGGGCCCATGCTACTTGCTTCT TGAGAATAGAATTCCTGCCTCTTAGTTTCGTATCTCTTTCTCTAACTTGC TCTGCTCCGCTAGAATGATTGGACCCAAGATTCTTATCCGGAAAATGGGG GAAGAAAGGATGCTGATGAATCGACATCAAAGATAAGACCCTTCTGTCAT CCTAGAATTTGGACAGATGGACATTTTAGGATTTGGAGTAGATTTTATCT GACATATCACACAGACACAGGAGTATATAAAATTTGCCACCCATAAACAA ATCCTAAAAAAAATCACTTTTCAGTGTGTTGAATAAGCTAACTCGTCTCA TGTAATTATCTAGCTCGAGATCATGTGATGAAGAAACAGAATTGCTGATG AAGTTGTAAGCTAAGGTGTCTGTGTGTGTGAGAGAGAGAGAGGAACCACA TATTGATGATGAGCGCAGCACCACTCAGCTCAGCTGAGCACAACATATGG CATCCGCCCAAAGCTAAAGGCATATATCTAAAGTTTATGGCGCAGCAAGC AACTAAAACAGCACAATACCTCCACTGCACACACTAGTAACCAGACCAGA CTTATCCATTCTTGTAGACTCGCAATAACCGATGGTGAGTGAGGGGCGGG CTATGGCTGAGGTGAAATTTAGGATGGATGCTCTTTGTCCATGAGTGTCA CAGTTTTTTTCCTCATTTTATTTTCTTCCAAAATGAATATATATATCCGC ACGATACAGGTGCCAATTAAGTAGGAGAAAGATGCACATAAAAGGGGTGG TGGTGCTGGTCACGGGGCTGGTATGAGATGAGGCCACCAGTGAGATGAAG GGGGGGGGGGGTGGCCTTTTGAGTGCACAAGAAGCACTCTAGTAGTACAC CAGTTCAGCACAGGGGCCAAGTAGAGACGTAGAGCAGCTAGCTGGCCTTA AAAGTTGCTCGAGAGTGAGTGTAGGGGATTGGTTGCAGTGTCATGCTCGG AAAACGCTCTGGTGTCACACCGAGCACGGTACCACTCACAGGACTCATCC CAACCTCTCCTGAAAAGTTCCCTAGCTTTCCCTCGATCCACAAGCTGCAT GCTGCTAGCTACACACACACTCACTCCTCTTCACAGCAGCCACTGCTGCT GCTACCTGTTGCTGTCCCTCCCCTATCTAGTGGTATCTACTACTTAACAC TTACTACTGCTGTGCTGCCATACCTGCCACTAGTAGGAGTGCCGCTTACT ACTACGTACTACCCTGGCACCTATCAGCTCCCTACTTGGCAGTTAGTGGC AGCGAGGGAGCCACTTCAGTTCACTATGTCTGTACAGCGACACTAGTCAC CGGTAACTAACTAGCTACTCACTAGTGGCTGGCTGACTCTGTATGATCGT CTGACGCCGTGTGTGTCTTGTGGCCACCAAATAGTGATGAGGAATACCTG TGGATATTTCAGCTCTGGTCCTGCGACGTCGAGGTCTGGCTATTATTTCA GTATTGTACAAGTCGATAGCCACGAGTGGATAACGCTGGAAGGAGGTGGC AGCTAAGGGAGTTGTTTGGTCTAACACACTAGATTACTACCAGCTAATGT GTACCTTGAAAGCAGCTTTTATTATTGAAGTATAACCATAGGTGTGTAAT CATGTCAGGTTCAGTTCTGATATTTCTAGTAACCGTTGAGAAGGTCTCCA GGAAACAGAACTCCAAATACAGTTCAAGTCTTCCCTCTAATTTGCAGTGA TCTTAGCAAGTAGTACTAGTACAAGTGTGTTATGTGCATTGCCAGTGGCA GAGTCGTAAATATGAGCTGCATATGGTAAGTGTGCGGTTACGATGACAGG GCAGCTACCGAAATTGCTAATTTTGGAAGCATAGTTTAGGTTGGAGCTGA AAGTAGGCCATGAGGATGATGTCCTCACTGCTTGTTTTCAATCATGCAAG CAAGAGGATTAGTTGAGTGAGCTCTAGCAAAAGGAGTTGGTGAAACAGCC AACTTGCAGACAAGTACACTATGTTTTGGCCAGGCACCAAACTAATTATG GCCTCGCTTAGTTAGGCACCTATATAATCGTGTGAAGCAGTTCCGATGAT TTAATCTCGGCGTAGTTTTGGGGTTAGGCGGGGCAGCGTTGTAGGGCAAC ATTGACATTTATCCGAAAAGGTAAATATATTGTGTGGTCGGCTGAACCAA ATCCCAGACCAACTTTTCCGAAAAGGGGAAAGGAAAAGAAAGGCCAAGGA TTGTTATCTCCATCTAGTTCTCCCGGATATTATTTGGCAATTCCTTTCGT GTCGTAATCAGGGGCCCGCCTGTGAGGGAGAGAGATCTAGTTTCTTTCTG TGGAATCTGTTTTTTTTTCCTGTGTTGCTGGATAAGACTAGAGTGGCACT GAGTAGAGAGACTAGGCGGAGGCACCGGCCGTGAGCGGTCAAAACCTGTG GATTTGACTTGAGAACATATTCAGCAGTCAACTGTGTTTATATTTACTAT TTCCTGAAATATTTTACAGACTGGTTAGCTCGGATCTTACTGAAGCATAT ATGGTGACGTCCGCTCTCTGTTTGTCTTATATGTAGGCGCCGCACGACTC GTCCTGTTCTTTCCAGATCTCCTGTTGTCCTCTTTGCTCACTAATAACTA ATCCTCTCACCTTTTCCTCTATCATATCAAGCAGGTGGATCAGTGTACTT GACATCTGTCAACTTCTTATTGGCTGGTGTACATCTTGAGGAGTAAGACA CGAGATTCTCAGTATACATCTTATCTCGTCGGAAGAAGCTTAGTTTACAG ATATACCGCTGGAGATAGATGGAAGCATTCCAAAGAAGCAAGTTTGCGGC ACACCAGTGGGCAGGGACGTTTCTTGAAGCAGTCACGAAGCATTAGAATA TACTACATGCGTGTCACGGCGTCGAGGCAGCAACATGCACTCAACCACGA AGAGGAGGCCTGAGAGCGAGGAGGCTACAACATGGCTGTAGCTTGGCTTG AGGAAGGGAACAAGGGATGATTCTGGCCACATGCGCAGGTGTGCTGCTGG AACAACAAGGTCGCCCACCAATCGGATGGAGGAGTGGTTGCCCATGAGCA AAGCCAACAACATCAACAGCAAACGCTTGCCGCACTCCCAAGGTGAGTGG CAGCAACATCTACTACCATGACCGGCTCTCCCCCCCTTCACTCCACGCCA CTAATCTGATAATTTCGGGCCAATAATGCAGCTCCATGGGCAGCAAGCTA AGCAGAAGTCTGACCCATACATGATTCCTTTTTTATCCCAGGCCAAAGCT TCTTCTTCTCCCGAGCTGTCAAGTCCCCCAGCTACTCTCTGCACAGGTGT TGCCGCTTTGTTAATTCCCATCATGATTAATTACTGAACAGGCAAACAAA TGAATAGATAGATAAACATACTCCTATATCTTTTTCTGAGATCATCTTGT CACGCTACTCCTCTCTACCATCTGATGTTTCTCTCTCTCTCTCTCTCTCT CTCTCTCGTGGCAGCATTGATTGCGACGTGAGGAGTGGTGGCCCAGCAGG CAGCCACTAATTAACCAATGGTGGTGGTGATCAGTGATCCCCTCCTCCTC CTGCGAGTGATGACAGTGGTAGCCACTGTCGAGTGTCCCACTACTGCTTC ACTCGTCATCGATCCTGCGCTGCTGGTGTGTGTGCGTGGTGGGTGTCCAT GATCAGCACCACATGTTCCATCTCTCTCCTCATATTCCCAACCACTACAT ATGCGTACATTTTCCCTCATTCTCTTATCTACACTACTGGCAGATTTCAT GCAGTTTCTGTTCTTGTCACCTAGGTACGGATCGTGCGTGCCCACAACGC GATGGATCGTTACAGGAGCCCCAACAACGCCCTCTGCCTCGCCGCCCAAC GCATAGTTTCACACCGCTTAATGTCCATGACACATATTCCTCAACTAATC ACATGCTTTCTCTCTCTCTGAGCTTGGACAATCTTTATGGTTTGGTGTAG CCTGGACAATCTACATGCAATTTTTTTTTGTTTTTGTTTTGCCAATTAAG TAGGCACTCTCTGTTTCATAATTCTTGTCGTGGTTTTAGTTACCTACCAC ACCATGGTTTGTAAGAGAGAACCAGGGTCAGAAATTTGAAGCTAAACTAA TTAACCCCGCTTAACTCGCGC

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.