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GrainGenes Sequence Report: AA013575

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Sequence
AA013575
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA013575
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
ATGGATCTTTATCTTCTGTTGCATAGCATGGTGATGCATGCCATGGCTGC
GATGGTCGTCTTGGTATACATCCCTCTGTCGATACCCGTGAAGCTCTTCA
TATGGGCGTTCGTGAAGCCGTTCAGGAAGGAGGATTTGAGAGGCAAGGTG
GTGCTCATCACCGGCGCCTCTTCCGGCATCGGCGAGGTAATTAATTAAGC
AAGCTCCATGCTCCTGACCTCGGTCAGTTTCTATCCCAATTCAATCCCCG
TATGGATCTCCGCAGTCCACACATTGTTAACCAATTAGGACTTCGTAGAC
TGTCGATCGGGTTCGGGTATCAGATTTCTGAAACTCTTCAAAGCAGACGC
AGTAAACACTCATCATACCTTAAAAACGTTTTAGAGTGCATTGCAAAACA
TTTCTGCAGTATGGCGATGAGCTGGGACGGATTAGCTAGCAGACAAGTAG
CTTGCTGGATCCATGCTGGTACCACAAACGTACACATCACGATCGAGCTC
GCCTATTTTCTTCCGATGATTATAAAAAACTTCTTAAAATAGTACTACAT
TCCATCAGATGGAATAACATCTGCAATTTGATTCTATTTGTATGCATGGT
GCGCTGTCGCTTGCTAGTTGCATCATGGTACAGTACAAACTTCTACATAA
TAAAGCAAATCGGCTTTATTATGGAGCCAAAGAAGAGGCCTCTCACGACC
TAGAAAATTTTTAGCCGTCGGATCGCGCCATCTACGTGTTTCTGGCCATT
GGATGGTCTTCAAATCCCGCCTCTCTAGGATCAAATAGACTTTCCATGGT
CAATTGACCTATCTCGGTGATTAAATACCTTTCTTTTTAGAAGTACACAT
CTCATGTTGAAAAGTAGAAAACAGTAAATAAATAAAACATATATTGAGAA
GTGTAGAAAAAATAGTTTGCCATAAACTCCGCAAAGTACACATACTTTGT
TCCAGATAATATTTTTATTTCTGCACTTCCCCATCAAGAATGTGTACTTG
ACTCAAAAGAGGTTCTCAACTTCCAAGAATAAGTTTGTCTGGCGAGGTAT
ATTATTAAGCCTCTTGATCACTAGTAGATAGATGCATTAATTGATTTGTG
TGTGTATACATATATTAACGAATGTTGTTTCTTATTTTAGACATCCACAT
CGACCAAGTCAGTTAAAAATAGTAAACGAGGACCGGCCAAAGGGATGCCC
GATGATGCGCACCTCACAATTGTTGAGGTCTCTCCAGTGGGCGTCCTGTT
GCTTCCCATAAAGAACGCAAACACATTTATTCATCAATGTGGATTTGTTG
TTAGGGACAACGTCCCGATCAGCATTATCAACTGGAATAAGCCAGCAAAG
GCCGATAAATATTCTATGAGTTATATCGAGGATAGATACAAAGACATACT
ATGGGATAATCTCATTCGCCATTTCACCCTACCGATCTTAGAGACTAAGG
AGGCCACAGATGATATGAGGTCCAAAGTTAAGCGTTTCACTCTTAAGAAG
ATGACCCAACAGTTCAATAACTATAAGAAAATATTGTACAATGAATATCT
TGAGGAAGGAAAAGTTCCAGCATTCGAGGACTCACTAGAGAAGCAGCGGC
CTCACTGGGAAAGATTTCTAGACTACAAAATCAGCAATAGCAAAAAAAAG
GTCCGCAAAGAATAAAGAAAATGCTGCAAAAAAAGAAATATCACCATACG
ATGGGGATAGGTGGCTACAGGACTTCCGTTTCTAAGTGGAAGGAAGCCGA
GAAAGCCTTGCGTGCCCAAGGGCTCACTCCAGCTACAGAGGACTGGCCCA
TCAGAGTAAGGAATTGGTTACTTGCCCATGGGTCAAAGTATGACATAAAA
ACAGTGGAGTTAATATTCGATAAAAAAGTCCAATATTGCTACACCCCATG
GAGAAATTGTTAAAACAATTGAGGAGGTTAAAAAGGATGACTTCAAACCC
GACAAAGAGAACGACGAGCTGACAAAGGCCCTTGGAAATCCTGAAAAACC
AGGACGAACACGAGGCTTTGGACCTTTTGTGTCGTGGAAGACTGGGTTTC
CTTAGGACACTGAATCATATAGAAGCCGAGCGAGAGCAAATAAGCGGAAG
GAGATAGAGGAGGCATTCCGGTTGCGTAGCGTGAAAAGAAAGAACGAGGA
AATATATGCCATGCTAAAAGAGCAACAGAAGCAGCTGGCAGACTCTGGCC
AGTGCTATGGGTCCAACATACCAAGCTAGCAGACAAGTAGCTTGCTGGAT
CAATGCTGGTACCACAAACGTACACATCACGAGCTCGCCTATTTTCTTCT
GATGATTATAAAAAACTGCTTAAAGTAGTACTCCATTCCATCAGAGGGAA
TAACATCGTCGATTTGATTCTATCTGTATGCTGGTGCGATGTCGCTTGCT
AGTTGCATCATGGTACAGTACAAACTTCTCCATAATAAAGCAAATCTGCT
TTATTATGGAGCCAAAGAAGAGGCCTCTCACGACCTAGACATTTTTAGCC
GTCGGATCGCGCCATCTGCGTGTTTCTGGCCATTGGATGGTCTTCAAATC
CCGCCTCTCTAGGATCAAATAGGCTTTCCATGGTCAATTGACCTATCTCG
GTGATTAAATACCTCTCTTTTTAGAAGTACACATCTCATGTGGAAAAGTA
GAAAACAATAAATAAATAAAACATATATTGAGAAGTGTAGAAAAAAATAG
TTTGCCATAAACTCCGCAAAGTACACATACTTCGTTCCAGATAATATTTT
TATTTCTGCACTTTCCCATCAAGAATGTGTACTTGACTCCAAAGAGGTTC
TCAACTTCCAAGAATAAGTTTGTCTGGCGAGGTATATTATTAAGCCTCTT
GATCACTAGTAGATAGATGCATTAATTGATTTGTGTGTGTATACATATAT
TAACGAATGTTGTTTCTTATTTTAGACATCCACATCGACCAAGTCAGTTA
AAAATAGTAAACGAGGACCGGCCAAAGGGATGCCCGATGATGCGCACCTC
ACAATTGTTGAGGTCTCTCCAGTGGGCGTCATGTTGCTTCCCATAAAGAA
CGCAAACACATTTATTCATCAATGTGGATTTGTTGTTAGGGACAACGTCC
CGATCAGCATTATCAACTAGAATAAGCCAGCAAAGGCCGATAAATATTCT
ATGAGTTATATCGAGGATAGATACAAAGACATACTATGGGATAATCTCAT
TCGCCATTTCACCCTACCGATCTTAGAGACTAAGGAGGCCACAGATGATA
TGAGGTCCAAAGTTAAGCGTTTCACTCTTAAGAAGATGACCCAACAGTTC
AATAACTATAAGAAAATATTGTACAATGAATATCTTGAGGAAGGAAAAGT
TCCAGCATTCGAGGACTCACTAGAGAAGCAGCGGCCTCACTGGGAAAGAT
TTCTAGACTACAAAATCAGCAATAGCAAAAAAAAGGTCCGCAAAGAATAA
AGAAAATGCTGCAAAAAAAGAAATATCACCATACGATGGGGATAGGTGGC
TACAGGACTTCCGTTTCTAAGTGGAAGGAAGCCGAGAAAGCCTTGCGTGC
CCAAGGGCTCACTCCAGCTATAGAGGACTGGCCCATCAGAGTAAGGAATT
GGTTACTTGCCCATGGGGCAAAGTATGACATGAAAACAGGGGAGTTAATA
TTCGATAAAAAGTCCAATATTGTTACACCCCATGGAGAAATTGTTAAAAC
AATTGAGGAGGTTAAAAAGGATGACTTCAAACCCGACAAAGAGAACGACG
AGCTGACAAAGGCCCTTGGGAATCCTGAAAAACCAGGACGAACACGAGGC
TTTGGACCTTTTGTGTCGTGGAAGACTGAGTTTCCTCAGGACATTGAATC
CTATAGAAGCCGAGCGAGAGCAAATAAGCGGAAGGAGATAGAAGAGGCAT
CCCGGTTGCGTAGTGTGGAAAGAAAGAACGAGAAAATATATGCCATGCTA
AAAGAGCAACAGAAGCAGCTGGCAGACTCTGGCCAGTGCTATGGGTCCAA
CGTACCAAGCTAGCAGACAAGTAGCTTGCTGGATCAATGCTGGTACCACA
AACGTACACATCACGAGCTCGCCTATTTTCTTCTGATGATTATAAAAAAC
TGCTTAAAGTAGTACTCCATTCCATCAGAGGGAATAACATCGTCGATTTG
ATTCTATCTGTATGCTGGTGCGCTGTCGCTTGCTAGTTGCATCATGGCAC
GGTACAAACTTCTCCATAATAAAGCAAATCGGCTTTATTATGGAGGCAAA
GAAGAGGACTCTTACGACCTAGAAATTTTTAGCCGTCGGATCATGCCATC
TGCGTGTTTCTGGCCATTGGATGGTCTTCAAATCCCGCCTCTCTAGAATC
AAATAGGCTTTCCGTGGTCAATTGACCTATCTCGGTGATTAAATACCTTT
CTTTTTAGAAGTACACATCTCATGTGGAAAAGTAGAAAACAGTAAATAAA
TAAAACATATATTGAGAAGTGTAGAAAAAAATAGTTTGCCATAAACTCTG
CAAAGTACACATACTTTGTTTCAAATAATATTTTTATTTCTGCACTTCCC
CATCAAGAATGTGTACTACTCTGGTCACACACCGTTGTTAATTGACTCTG
GTCATCAATCTGACTTGGGCATAAAAAACATTTCTCTTTTGAGTTATCAT
GGTTGCGGCATGAGGTTTTTTTGAGATGGTGGCGGCTGAATGGAATGTGG
TGTCCAATGGGAACACGCCCATTCAAATTTGGCAAAACAAAATAAGACAT
CTTCGTCGTTTTCTAAGAGGCTGGGCAATGAATCTCAGTGGTAAGTATAA
AAAAGAAAAGAGAGATTGTTGGCTATTATCGATAAATTGGACATCAAGGC
CGAAACTTCTCCTCTTAATGATACAGAGAAGAACAACTTGAAAGATGCGA
ATGATCGCATTTGTTCTCTTAGACGCGATGAAGAGACAAAGTGGGCTAAA
TGCGCTAAGGTTAATTAAACATGTGCAGGAAGGTGGGAATAACACCAAAT
ATTTTAATTTGATTGCAAATGGAAAACATAAAAGGAAACAAATCTTCCAA
TTAGAGCAGGACGAAGGAACTATAGTGGGAGATGACAATCTGAAAATATA
CATTACTGAATTCTATAAAAAATTGTTCGGGGATCCTCATCCAAGTACTG
TCACTTTAATGGAGGACAGGGTTGAGGATATTCCACAGTTGTCGTCTGAG
GAAAATATTCTTCTTACAAATGTTTTTAGTGAGGAGGAAGTCTTTGAGTC
TATCTCTCAAATGGAACATAATAAAGCTCCAGGGCCAGATGGGTTCCCTG
CAGAATTTTATCAAAAGTTTTGGGAGGTTATAAAAAAAGATTTGATGGCA
TTGTTTGCCAACCTTCTATCACGAGAGCTCCCCTTATTTAAATTGAATTT
TGGGATTATTACTCTCCTTCCCAAAAAGGAAAATGCGGTCCAAATCCAGC
AATATAGACCAATTTATCTCCTTAATGTTAGCTTCAAAATTTTCCTGAAA
GTGGCCACCAATCGTATCACAGACCTGTCACAAAAGGTGATTAGACCATC
GCAAAGTGCTTTTGTGCCAGGAAGACATATTTTGGAGGGCGTGGTGGTAT
TGCACGAAACCATCCATGAACTTCATCATAAGAAGCTTGATGGTGTCCTT
TTCAAAATTTATTTTGAAAAGGCATATGACAAGGTGAAGTGGCCTTTCCT
GCAACAAGCCTTGCGCATGAAGGGCTTTGATCCCGTTTGGTGTGAGTGGA
TTAAGCATTTTGTACAAAGAGGCAGCGTTGGTATTAAGGTAAATGATGAT
GTTGGTCATTATTTCCAAACAAGAAAAGGTTTGCGACAAGGTGATCCATT
GTCTCCTATGCTTTTTAATATAATAGTTGATATGTTGGCCATCCTAATAG
CACGGGCGAAAGAGGATGGTCAAGTTGGCATCCTCATACCTCATTTGGTC
GAAGGAGGGGTGTCCATTTTGCAGTATGCCGACGACACAATTCTTTTTAT
GGAACATGATCTTCAAAAAGCGGTGAATATGAAGCTAATACTATGTATGT
TTGAACAATTATATGGTTTAAAAATAAATTTCCATAAAAGTGAAGTCTTC
TGTTTTGGGGAAGCTAAAGATTTGGAGCATCAATATAGATAAATTCTTGG
ATGTCAGTCGGGTTCTTTGCCTTTTCGGTATCTTGGGGTACCTATCTATT
ATAGAAAATGGAGAAATTCTGAATGGAATCCGGTAGAGAGTCGTTTTATG
TCCAAGTTGGGCTGTTGGCAAGAAAAATTACTCTCTTATGGAGATCGTTT
AGTTCTTATTAACGCTGTCTTAACTAGCCTGCCAATGTTTATGCTCTCAT
TTATGGAGATACCTAAAGGGGTACGTAAACGGTTAGATTTCTTCCGGTCT
AAATTATTTTGGGAAAGTACCGGCTTCGGTAAGAAATATAGGCTCACAAG
ATGGAATATCATTTGCCGTCCTAAGGACCAAGGAGGGTTAGGTGTTGAGG
TGTTGGAACTAAAAAATAAATGCCTTTTAAGCAAATGGCTATTCAAGCTT
TTAACTGAAGAAGGTTTGTGGCAGCAGTTGCTTAAAAACAAGTACCTATA
TAATAAAACACTCTCACAAGTTGAAGCAAAACCAAGTGATTCCCCCTTCT
GGAAGGGCCTCATGCGTGTTAAAATGTTTTTTTCACCAAAGGCTCCTTCG
AAATTGGTGATGGGGCTGCTGTTCGCTTTTGGAAAGATGTGTGGTTGGGT
GAGTCTCCGCTTGCTGAACAATACCCGTCATTATTTAACATTGCGCAAAG
TAAAAATGTTTTAGTTGCGAACGTTTTATCCAATGTACCACTGAACATTG
AGTTTCGACGGACATTAACTGGCAATAAGTGGAACGCATGGTTACACCTT
TGTCAGCGTCTAATGGCGATGCAGTTATCTAGCACCCCGGATAAATTTGT
TTGGAACCTTACATACACAGATGTTTTTTACTGTCAAATCGATGTATCTA
GACCTTATGAATGGTCATACTCGATTTCTTCACAAGTATCTCTGGAGACT
GAAAATTCCACTCAAGATAAAAGTTTTCATGTGGTTCCTTAAACATAAGG
TCTTGCTAACTAAGGACAATCTAGCCAAGCGTATATGGAAAGGATGTGCT
AAATGTTGCTTCTGTAACTCAATGGAGTCGGTGGAACACCTTTTCCTATC
ATGTCCTTTTGCACGCATTATTTGGCAAATAGTTTTCATCACATATAATA
TACCACCACCAACTAATATTACTAATATGTTTGGTAATTGGTTGAACGGA
ATGGCTAAAAAGGACAAGGCACATATGCGTATGGGGGTATTAGCCTTATG
TTGGTCTATTTGGACTTGTAGAAATAATCTTGTGTTTGACAAGAAAAAGG
GTATCAATTTTTTGCAGGTTATTCGCCTGGCTGCGCATTGGATACTACAA
TGGTCTATCCTCCTTCCGGCGGATCAGCAGGAGTCCATGGCTTTGGATGC
AACCGGCTTTTGACGGTCGCTCAGGACTTCTATTTCCAGGCTACTGGATG
GCGGCACATTAATAGACTACAAAATGGATAGTTTCTTGTTACTTTTCATT
TTCCGCTGGTTGATACATGTCTCAAACTTATGTGATCCGTGATGTAAGAC
TCTGAATATTCACTTTGCAATAAATATGGCAGTGTGCATCACTTGATGCT
GAGGCCGGGGCTTTGTCCCCATTTCGGAAAAAAAAGAATGTGTACGTGAC
TGAAAAGAGGTTCTCAACTTCCAAGAATAAGTTTGTCTACTCCTAGTGGG
AGGGATGTGTCGTCGGCACATAGATGTGGTTATCCTCCTTTTCGAAAAGG
GATGTGTAGATAAGATTTGTATGAGTTGCATAATACCCACTATATAAATA
TATGAGCAGCATTTATTCCCCTAAACATAAATTGTGCAGAAACTCGCCTA
CCAGTACGCGGAGAAAGGAGCATGCCTCGCGCTTGTAGCGCGCCGAAAGC
ACGCACTGGAGGCCGTTCCCGAGAACGCTCGAGAACGCGGCGCGCACGAC
GTCATCGTCCTCGTAGCCGACGTGTCTGATGCCGAGGAGTCGAGGCGCGC
GGTCGAGGAAACCGTCTCGCACTTCGGCAAACGTACTGCATCCATACCTA
TACATTTCACATGTGTGGGTACATATATTACTCTATAGCTTAATCCTAAG
CAAAAGCGAGGCCTCTCAGGCCATCTTGCCGAGCGTCCTGCCACTGCCAC
TGCATGTGGGCCTGCTGTGCGAAGCCGTTTTTTAATTCGCTCAGAGTCGC
AGAGGAGGAGGGAGGGACTAGGGAGGGGGGGCAGTCAGAGCCAGCAACGG
AGCGACACCGACCAGCGCCAGTGCCTCCCACCAGAAAAGCGGCGATAAAA
AAACCCTAGCCCCCGCATGGCGCCTAGATCCCGGGCTTCCCCGCGATTGC
GGACGCACCGGCACCAGCACCGACACCGGAGGCGAGCCACAAGGCGGAGG
AGGAGGAGGGGAGGCGACAGACGAGAGGGATGCGAACAACAACAACCACA
CGTCGGAGGACGAGGGCATGGCGGCTAGCACGCCGTCCACCCCGACAACT
CTCCGACCACCACCTCACCATGCCCCTCCCCTCATCTTCACGGAACAGCT
TCGCGAATCGCGCATGGGAGAAGACCGGCGCCATTTAGAGGCTTGCAGAG
CTCGGCTCCTCTGCTGCCGGATTCATGCAGGGAGCCCCCTAGCTCGCTTC
TCGCTTTCCGTGGCCCAGGTCGTGCCTCGGAGCGAGGCCACGCGTGGAGG
ACGGACAAGGCGCCCCGGTTTCACGTCGTCCCCAAGATCTGATCCCAAAT
CTTCCTCCCTGCAGAAATAATGGAGACCCAAATTAGCCAAGAAAATATAT
ACAGTACCAGGAGCCTGATGGGAGGCCGCTACTGATGGTGCCACTAGGGA
AGCGATGCAGAAGAGAGGGAAGGAGGTGCGGCAGTAGGCCGTCGGGTTCA
AGGAGGGTGAGGACTTCCAAGCTGAGCCCTAGCCCCAGGTTCGTAGTTCC
TCTAATCCTTATCAATTACTATTTTCAAGACTTCTGTTTCTCATATTTTG
TGAATCACACGATTACATTCCATCAATAGCTCTTCCAGTTGTTTACATAA
GCAAGATGTGTTGTTCAGTTACAACACCTATTTTTTATTTCTATATGATG
CATCCTTAAGACTAGTTAATCTGAGTTTTGTACTATAATAGAGGAAATTA
GATTGTCAAAGCGAGTTACATTGACACTTGGTACCACAGCTAACTGTTAA
AATGGAAGGAAAAAGGCCATATGATACTTAATCAGTAATATGTGATAAGT
AGATTGCTGATTCTGTACTTGGTACATATTACATCCTGTATTTAAATATT
ATAATTATAATATATATATATATATATATATATATATATATATTGTTATG
CTAAAAATATTATTTGGTCCCTACTAGAAAGTGGTTAGCTTTATTCTACT
CCATCTTAAATAAGTGACTTGCATTTGTCTAGATTGTGAATGTATCTCAC
ACTAAAACAAATCTAGATACATATGAATTTAGACAAATCCAAGTCACTTA
TTTTAGGATGGAGAGAGTACTAATCCTACTACAAGTTGCCTGTTTTGCCA
ATGTTTTTCTATCCTTCTAAATGCCAAATATATGTTGATTTTCGTTATGT
TTTCTTCACGACCAAGTCCCTAGGAAATACATTCCTGAACGTAGGGGCAG
CTGCCCCGTTTTGCAAAACCCGTTTATAAATGTCAAAAACATTAGAAAAA
ATTTGCTCGTGTACCTCTCCGCAAAATGTGTGCATAGCAGAAAGTTTCCT
GGAAAAATGATAATTTTCACCTGTGTAAAAAGGACAATAATGCCCCTAGA
GGGCATATGCATTAATTTTTTTAGTATGCATGATTACGAGAGTTAGCGGT
GCGTTTATATGCAGTGAACCATGATTACGAGTGTTAGCGGTCTCACGTAG
ACCATGTACTATGTTTATATGCAGTGAACCATCTGGTTGCCAATGCCGGG
ATCTGGGCCACCGGCTGCTTCGACGAGATCACCAACATAACGGCGTTCAC
CAAGATGATGGTAATTCTAAGATGCTATCATATCTGCGCTCCTTTCTTCG
AATTATGCTAGAGCAACATAATATGTAATGTGATGTTTATTTTGAGTATC
TTAGGATGTGAATTTCTGGGGCTCTGTCTACCCAACCTACTATGCCCTGC
CACACCTCAAGGCCAGCGGAGGGAAGCTGGTCGTGTGCTCCTCCGCGGCA
GGAACGGTGGCGACATCGAGAATGAGCCTCTACAATGTGGGTACAGGAAC
ATCTATCACATATGACATGTTTATCTCCCATTTTGATTTGATTTGATTTG
CCGAGGAACATCACGGATGCTCGTTTTATTTTGTGCGGGCGCGCGTGCAG
GCAACCAAAGCGGCCCAGATCAGGTTCTACGAGACACTCGGGACCGAGCT
CGGCTCGGACGTCGGTGTCACCATACTCACCCCGGGTTACGTCGTCTCCG
AGATAACGCAGGGCAAGGCCATCCAGAAAGACGGCGAGCTCGCCGTCAAC
GAGGAGTCGAGAGACGTAAGAAGTCGCAAAGGAAACCAGAGTTTTCAGTC
ATCTGCAGTCAGAAATGCTCCCTGCTTATTAGAGGATATATCTATATGTA
TGAATTATGATCGTTAAAACTTGGAACTGCAGGCACAGGTCGGGGTGTTT
CCGGTGGGTCGTGTGGAGACGCTCTGCGAGATAGCGCTGGACAGCATCCG
CAAGGGCGACTGCTACCTGACGTGGCCGTCCTTGTACCGGCCACTGGAGC
TGATCGCCTTCCTTGCCCCTGAGGTCCTCAACTGGGTATGCTACAAGCTA
TACAACACCAGAAATGGGGGCCGCTCGCTGGGCCAGAGGATCGTCGAGGC
GACAGGAGCGAGGCGCTTGTACCCAGCGGCTCTCCGGCGTCCACTCATCA
TCAAGACGGAA

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.