Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA029471

[Submit comment/correction]

Sequence	AA029471
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA029471
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	ATGAGGAAGCCATTAGAGGAAGGTTGAAAAGGTAGGCGTTTATAGGTGGG TTTTCTGGAATTCTTGGTGATGTTTCCTTTTATATGTTTGTTTAATTTTG GGTGTTTCTTTCCTTCTTATGTTTGTTTTGAAGAAGCTGGACTGGGAGGC ATGTCTGGCAGTGACGACAGGCATGGGAAGGGACCGGGGGCGGAGGCGCC GAAGGAGGACAAGTTCCCCGAGTGGTTGCGTGTGCTTGCCGTTGACGACG ACCCCGTCTTCCTCAGGGTCCTCAGTTTCCTCCTGCGCGTTTGCAAATAC AAAGGTGAGCGCTTTCGATCTCTCTCCTCCTCTGCTTCTACCATAACCCA TTACAACCTGGGAATAATGCTTGCTTGGTTGGATTTGGTGCAACAACAAC GGTGACGGATGCAAGGACGGCGCTGGAGATGTTGAGGGAAGGAGGAGAGG AGAAATTTGACCTGGTCATCACCGACTTGCACATGCCGGACATGGACGGC TTCAAGCTCCTCGAGATCATCGACCTCGAGATGGATCTCCCAGTCATCAG TATAATTAATCTCCCTTGCCATCTCGTGTTTTGTTATTTGTTCGTTGTCA GCTAGTTGACCATTGCTAGCTCATGGTCATTAAGATCTTCTATTAGTCCT CAATCCTCGGGTTTAGCAATGTTTCTATATATATACATGGCCTCCAAGTA GCATATGTATTTCCCCGAAAGAAAATAGTAGCATATGCATTGGGCGGATG TTTACGTGCACAATGTGTTGTTGCACGCATGATCTATTTTTGGTAGCGAG GATCTAACAAACCGGATCCGGTTTCGACCCGGACCACCGGGATCCTATGT AACCGCTCATTTGTTAGATTGGATGGCAATTGGGGGAAGTGGAATAGATC TGGAGCAACACATGGGTTAGATGGGAGGAATGTGTTGTTGCACACATGAC CTATTTTTGGTAACGAGCGAACCAAATCATGTTTCAACTCGGACCAGTAG GATCCCATGTAACCATTCATCTGTTAGATCATATGCAATTGGGGGAAGCG GAGCAGATCTGGAGCAAGACATGGGTTAGATGGTAGGGTGGGATCGGTTG TTGTGGCGGCTCAATGAAATTAAACTAAGACACTAAGGACGAGGAGATGG TGGTGATGCATGTGGTTCGGAGGCATGGGAGGTGGTGATAGATATGGAGA TATGGCAGTAGTATCCTTTTGGACAAGATTTAGATCCGTTCTCCAATTTT TGTCCGGACCAACATGGTCCCATCTAACCGTTTACCGGTTTGGTCAGACA TGCACAAATGTTTTGTTGCACGCATGACCTATTTTTGGTAGCCAGGATCT AACAAACCAGATCCTATTTCGACCCGGACCACTGTGATCCCATGTAACCG TCCATCTGTTAGCTTCAGATGGAAATTGGGGAAGCGGAGCAGATCTGGAG CAACACATGGGTTAGGTGGGACGGTGGGACCAGTTGTTGTGACCATTCAA TGAAATTAAGCTAAGAGACCGATGACGAGGAGATGGTGGTTGACAGTGCA ATGGACGTCGCCTAGAGGGGGTGAATAGACTGTTAACATTATTATGGTTT AGGCTCAAACAAATGCAGAATAAAAACTAACATTTAATTTATTGAGCACA AAATCTAACCACTAGGTTCACCTAAGTGCACCAACAACCTATGCTAAGCA ATACAAGCAACAAGGTGATAGCAAGGTAAAATACTTCAATCACGATGGCT TTCACAATGTAAAATGCATAAGTAAAGGGCTCGGTTGAGAGATAACCGAT GGACACGAAGACGGAGATTTTTATCCCGAAGTTTACTTCAAAAGAAGCTA CGTCTCCGTTGAAGAGGTGCGATGGCGCAATGCTCTCCTAACGCCACAAA TGGCTCACCTAAGGGTGTGGTGGCTCGATGCACACCCAACGCCACACAAG GCCTCACCCCGAATGCGGAAGCACGCAACTCACCGACGCTACAAAGGCTC ACCCTATTCTCTCGAGTGCGCACCACAAAAGACGGGCACTCGATCCAATA TGGGACACTTGAGGGCGGTCACCGAACCTGAATAAGATTGGGGCAATCTC CACAACTCAATTGGAGGCTCCCAACAAAAATGCCACAAAAGGCTACAAGG CCACAACAGGCCCCAAAGACCAAAAGAGGTCAACACTCCAACCACACAAC CGTCTAGGGTTCCAAGAACCCAAGAGTAACAAGCCCACAAGCTTGTACTC TCCTAATCTCGGAGGAGAACTCAAACCTATGCACCAAATGCAAGGTCAAG CCCTTCACTCCCAAATTACAACAAAGCTACAAAAGCTATTTGGGGACACA AAACTCTCCAAGATCTAGATCCCAATGATTCCTTCACAAAGAAGGGGTTT AGCTTGAGGGCATTGTAGATCTAGATCTCCTCTCTCAAATCCCTCAAAAA TATGAAAGAATCATGGAAGGGAGAAGGAGAGAGGACAAGCTCTTCAAGGT CAACAATGGAGAGAGAGAGAGAGAGAGAGATGGACCAAAGAACTAGTGCC CACGAAGGGGAAGAGGAGACTATTTTAAAGGGCTCCCGGATCTACCCGTT ATGGACATTTACGACCCTGGCCGGAACTTCCGGTGGAAGGACAGAATTTC CGGTGGCACATAGCCAACGTTCAGAAAACTGCGATCTAAAAGACAGAAAA ACGAGACTGGCCGGAACTTCCGCTGGTTCACCAGAACTTCCGGTGGGAGC GGAACTACCGTTAGAAATTCCAACCGTAGTTCCATCAAATAGAGCACATA AAACACAGAGGTTACAGTACGTGAGCGAAATGAGAGCCGGATTTCTAATC AAAACTTCCAGCGGCAACTAGGCCCGAGCGGAATTTCTGGTGCAACTTCG ATCCGAAATTCCGTCAAATACAACAAACCAGACAAAGAGAATACATTACG TGAGCGGAAGAAGAACCATATCTTCCACCGGAACTATCGGCGGCAAAATC CTTAGCGGTACTACCGGTGGCTAGCCGGAACTTCCGGTCAGGGAAATCCA GAAACCAAAACTGTAATAACTTTTGCATCCGAACTCCAAACGAGATGAAA CCAATTTTTTTGGAAATATAACGACATGAAGAATCCAACCGTAATAAGAT ATGCAAGGGAAATCCTAATTTTATGAACTAGAGCTTGTTATGATGATAAC CACAAGCTCTAGATCCTCTCATGGACAAGAACCAACTAACAACCAATAAA GATGATGCTATGTATGCTAAGGTTTGAGATCTGTCCGAAAGATGCGAACG AGTCACTCACTCGAGAGCCCCTCTTGATAGTACGGCTATCTATCCTAAAC CCGGTCTCCCAACTAACAACACGAGACCAGTAAAAGAGAAACCCTATCAA GATCATACCTTTGCCTTGAATATTCCACTTGATCTTGATGTAGACAATTT TGTCCTTCTCAAGATGGAACACCTTTCTTGATTGCTCTTGCTCTCTCTTG CTTGATGAAGACTTGCAAATTGCTCCCCCATACTTCATGGGATAATGCTT GCTTGGTTGGATTTGGTGCAAACAACAACGGTGCCGGATGCAAGGACGGC TTGCTGGAGATGTTGAGGGAAGGAGGCGAGGAGAAATTGACCTGGTCATC ACCGACTTGCACATGCCGGACATGGACGGCTTCAAGCTCCTCGAGATCAT CGACCTCGAGATGGATCTCCCAGTCATCAGTATAATTAATCTCCCTTGCC ATCTCGTGTTTTGTTATTTGTTCGTTGTCAGCTAGTTGACCATTGCTAGC TCATGGTCATTAAGATCTTCTATTAGTCCTCAATCCTCGGGTTTAGCAAT GTTTCTATATATACATGGCCTCCAAGTAGCATATGTATTTCCCCGAAAGA AAATAGTAGCATATGCCTTGGGCGGATGTTTACGTGCACAATGTGTTGTT GCACGCATGATCTATTTTTGGTAGCGAGGATCTAACAAACCGGATCCGGT TTCGACCCGGACCACCGGGATCCTATGTAACCGCTCATTTGTTAGATTGG ATGGCAATTGGGGGAAGTGGAATAGATCTGGAGCAACACATGGGTTAGAT GGGAGGAATGTGTTGTTGCACACATGACCTATTTTTGGTAACGAGCGAAC CAAATCATGTTTCAACTCGGACCAGTAGGATCCCATGTAACCATTCATCT GTAGATCATATGCAATTGGGGGAAGCGGAGCAGATCTGGAGAAGACATGG GTTAGATGGTAGGGTGGGATCGGTTGTTGTGGCGGCTCAATGAAATTAAA CTAAGACACTAAGGACGAGGAGATGGTGGTGATGCATGTGGTTCGGAGGC ATGGGAGGTGGTGATAGATATGGAGATATGGCAGTAGTATCCTTTTGGAC AAGATTTAGATCCGTTCTCCAATTTTTGTCGGACCAACATGGTCCCATCT AACCGTTTACCGGTTTGGTCAGACATGCACAAATGTTTTGTTGCACGCAT GACCTATTTTTGGTAGCCAGGATCTAACAAACCAGATCCTATTTCGACCC GGACCACTGTGATCCCATGTACCGTCCATCTGTTAGCTTCAGATGGAAAT TGGGGAAGCGGAGCAGATCTGGAGCAACACATGGGTTAGGTGGGACGGTG GGACCAGTTGTTGTGACCATTCAATGAAATTAAGCTAAGAGACCGATGAC GAGGAGATGGTGGTGACAGTGCAATGGACGTCGCCTAGAGGGGGTGAATA GACTGTTAACATTATTATGGTTTAGGCTCAAACAAATGCAGAATAAAAAC TAACATTTAATTTATTGAGCACAAAATCTAACCACTAGGTTCACCTAAGT GCACCAACAACCTATGCTAAGCAATACAAGCAACAAGGTGATAGCAAGGT AAAATACTTCAATCACGATGGCTTCACAATGTAAAATGCATAAGTAAAGG GCTCGGTTGAGAGATAACCGATGGACACGAAGACGGAGATTTTTATCCCG AAGTTTACTTCAAAAGAAGCTACGTCTCCGTTGAAGAGGTGCGATGGCGC AATGCTCTCCTAACGCCACAAATGGCTCACCTAAGGGTGTGGTGGCTCGA TGCACACCCAACGCCACACAAGGCCTCACCCCGAATGCGGAAGCACGCAA CTCACCGACGCTACAAAGGCTCACCCTATTCTCTCGAGTGCGCACCACAA AAGACGGGCACTCGATCCAATATGGGACACTTGAGGGCGGTCACCGAACC TGAATAAGATTGGGGCAATCTCCACAACTCAATTGGAGGCTCCCAACAAA AATGCCACAAAAGGCTACAAGGCCACAACAGGCCCCAAAGACCAAAAGAG GTCAACACTCCAACCACACAACCGTCTAGGGTTCCAAGAACCCAAGAGTA ACAAGCCCACAAGCTTGTACTCTCCTATCTCGGAGGAGAACTCAAACCTA TGCACCAAATGCAAGGTCAAGCCCTTCACTCCCAAATTACAACAAAGCTA CAAAAGCTATTTGGGGACACAAAACTCTCCAAGATCTAGATCCCAATGAT TCCTTCACAAAGAAGGGGTTTAGCTTGAGGGCATTGTAGATCTAGATCTC CTCTCTCAAATCCCTCAAAAATATGAAAGAATCATGGAAGGGAGAAGGAG AGAGGACAAGCTCTTCAAGGTCAACAATGGAGAGAGAGAGAGAGAGAGAG ATGGACCAAAGAACTAGTGCCCACGAAGGGGAAGAGGAGACTATTTTAAA GGGCTCCCGGATCTACCCGTTATGGACATTTACGACCCTGGCCGGAACTT CCGGTGGAAGGACAGAATTTCCGGTGGCACATAGCCAACGTTCAGAAAAC TGCGATCTAAAAGACAGAAAAACGAGACTGGCCGGAACTTCCGCTGGTTC ACCAGAACTTCCGGTGGGAGCGGAACTACCGTAGAAATTCCAACCGTAGT TCCATCAAATAGAGCACATAAAACACAGAGGTTACAGTACGTGAGCGAAA TGAGAGCCGGATTTCTAATCAAAACTTCCAGCGGCAACTAGGCCCGAGCG GAATTTCTGGTGCAACTTCCGATCCAAATTCCGTCAAATACAACAAACCA GACAAAGAGAATACATTACGTGAGCGGAAGAAGAACCATATCTTCCACCG GAACTATCGGCGGCAAAATTCCTTAGCGGTACTACCGGTGGCTAGCCGGA ACTTCCGGTCAGGGAAATCCAGAAACCAAAACTGTAATAACTTTTGCATC CGAACTCCAAACGAGATGAAACCAATTTTTTTGGAAATATAACGACATGA AGAATCCAACCGTAATAAGATATGCAAGGGAAATCCTAATTTTATGAACT AGAGCTTGTTATGATGATAACCACAAGCTCTAGATCCTCTCATGGACAAG AACCAACTAACAACCAATAAAGATGATGCTATGTATGCTAAGGTTTGAGA TCTGTCCGAAAGATGCGAACGAGTCACTCACTCGAGAGCCCCTCTTGATA GTACGGCTATCTATCCTAAACCCGGTCTCCCAACTAACAACACGAGACCA GTAAAAGAGAAACCCTATCAAGATCATACCTTTGCCTTGAATATTCCACT TGATCTTGATGTAGACAATTTTGTCCTTCTCAAGATGGAACACCTTTCTT GATTGCTCTTGCTCTCTCTTGCTTGATGAAGACTTGCAAATTGCTCCCCC ATACTTCATGGGGAAACCTCTTCTTTGAACTTGTCTTCATCACTCCATGA CCACCGAGGATGGGAAGCTTGAAGCATGAGATCTTCTAGAGATGGCGCAT CTTGAGCTTGCCCTTCTTCATTCCTTATTGAGGTTGATCCAACTTGGATC GACTCTTTCCACTCATCTTGATCAACCTTCAAGCTCCTTCTTTCTTCAGG ATTCCAAGGAGCACAAAGCCCTTGGACATTTCTTCTTCTCCTTCTTCATA TTTTCAACCTTGATACCAACACATGGCCCAAGCGATGCCAATGGACAAAC CTACAAGTGAAACTCAATTTACACATTAGTCCATAAAGATTGTCATTAAT TACCAAAACCACACATGGGGAATACATGCCCTTTCAGTGGTGATGCTTGT GGTCCGGAGGCATGGGTTGTGGCGATATGGCAGTAGTACCCTACTAGGTA TGATTTTGATCTAGTCTCCAATTTTTGGCTGTACTAACATGGTCCCATCT AACCGTTTACCTGCCAAATCATATAGGCATAAATGTTTTGTTGCAAGCAT GACCTATTTTTCGTAGAGATGATTTAACGAACCGGATCTCATTTCGACCC GGGCCACTAGGATCCCATATAACCGTTCATCTATTATATCGGATGGCTAG GGGGGATCGAAAGCGGGTGGATCTGGAGCGACACATGGGCTAGGTGGGAG GACGGGACCGGCTGTAGTGGAGGTTCATGAGGGCGGGTGGTAGAAGATAT TGGTGGAAATAAGCTAAGAGATGGAGGGCGGGGAGATGGTGGTGATGCAG TAGTACCCTCCTGGAAAAGATTTAGATGTGGTCTTTTGAAAAGAATCTAA TGAGTTAGGTCCAATTTTTTTCTTTGAAGCATCTAATTGACTGTTGTCGT GATGCAGTCTTGTTCATAATGTGTAATACATTTGCTTCCTCAATTATGTG TCTCGTTTGAAAATAATATACACCTTTTTCTGATCTGGAACCACTGGTAC AAAAGATGTTCACTTTTCTAGATTTCCACATGTGAAAGGTAATTATCTTA ACTATATGCCATGCAGTGCTATCTGTGAATGGAGAAAAAGAGACTGTGTA CAAGGGGATACTTCATGGGGCATGCGATTATTTGGTGAAACCCGTGAAAA TCAAGGAGCTCAAGAATATATGGCAGCATGTCGCAAGGAAAAACCAGGTT GCTATGAACCACGACATCAGTGAGAGTGATGATGATGCCGATCAGAGGAT GGTACAACCGGTAACTGTTGTGCATGGGCAGGGCAGCGCAAAGAAGAGTA ACAAGCGCTCGAAGAATAAGAAAAATGGTAGACATGGCTCCTATAAGAAC AGAAGGATACCAACCACCCAGAAGAAGCCAAGGGTTTCATGGACCGGGGC GCTACACAACAGGTTCATCGAAGCCGTCAATCGACTCGGTGTCGATCGTA AGTTCTCACAATTATTTTGTTGCTTATTCACAAAAACAAAGTTTATAATT CTTTGAATTTTTTTTAAGTAACAAAATGTTTGGATTATGTAAATGCAGAG GCTGTTCCAAAGGCGATACTGCGAATGATGAATGTCAAGAACCTTAGTAG GGAGAGTGTTGCGAGCCACCTTCAGGTTTAATTTCTATCCTTATGTTTTA TTTCTATGCATGCGTTTATAGTCTTTCTAAGCTAACAATTTTTTCGCACA TAAGACCAAGCTTTTCGCACATAAACCTGTGTAAGAAACATTTTAATGAA TTTTCCTCTGGTGAAAATGTTATGTCGTATCTGATATAATGCATGCCCCA CATTTTCTAGTGTTTTTTAAACAATGTAACACCTTCACATGCATCATTCT GTTTCCCACATGTCTTCCGTTTCATTTCTCGAGAGCATGAAACTCATACA TATTCTTGCTCATCTTGTTACCTCAGAACCAAGAACCAGAGAAATATAAC CCTGTCGTCGATTCGTCTGATGAAATGGACATGAATCCCCCAGTACAACC GTCGTCAGTCGTTTGTTGCTGTGGCTCGAACATCCCCTGCTCAGCTCCAT TGACAATAGGACCTCACGGTCTGTCCATCCAGCCCAGCAACAGGTCCATG GGCAATGGCAGGAGCATGGCAAGGAACGCCGCGGCGTGGCAGCCCGAGAC AAGCAGACGCCGCGCCTCGGATCGCCCAATGTTGGATGTGTTTCATCCTA ACCATTCTACCAAAGCCTACGTGGGCGTCCTGCGCGAGAAGCTGCTGGAG GCGAGCAGTATGGTGCCTGCCTCCCATCCTAGCAACTCCTATGTTGAAGA AATGCCGGATGGTGAACCTGCAACAAACCAGTTCCTGGTGCAGGTGCAGC CTCCAGAACTGATCAGCCAGAATGTGAAGCCATCAAGATTTCCTGGTCCT ATGAATGGAGCACCCGTCGTCGTCCCAGCGCAGGCGAACGTGCTCCAGCT GCCAAGTTTTGGAGCCTCACCTGGCCAGATGGCCGTGTTTCAGAATGGGC AGCAGAATCAGATGGCAGGAATATTCAGCAACAACAACAACGCTACAACA CCAGTGGCTGGCTTCAGTGAGCAGATGATGCCATTTTTCAACATAGCAAG GAACACAGGTCCAGTAGAAATGACTCAGATGATGGTCAGTAGTGGAAGCG CCAGCTCTCCATTTCCTAGCCTTGGGACGGGCAGCTCTGTCGGGCCGCCG CCTAGGCAGATGGCTAATGGTGGAGGCATCAGCTCTGCATTGCCTGTCCT CCGGGACAATTCTGTCAGGCCGGAGGATGGCGGGGATGCATATGGCATTC TCCCTATGCAAGATGGCCCAGCTGATCAGCAATATCCTGGTGATGATCAG CTAACCCCCAGCACTGACCTGTTACTGCAGCATATCTTTTCCAGCATGGT AAATCAGGTAGTAAGAACTTTTTTTTTCTCGTTCTTTCACTCTGACTACT TTATGGTCAGGTGTATCTGAATCTAAACTTCTTTTCTCACTGCAGGATAT CAATCCAGATGATGCTTTCTTTGGTGAAGAATATTAGTCCGTTTGTTCGC CCCGACCTGCGTGAGACATGTTTCTGCATTGTGTGTGCAAGGCCAGATGC TGGAATCACTTGAACTGCCGAATTGAAGTAGGATAGTTGTAGAAGCAGGG TGCGGGCTTCTGTTTTTCATCAGCTTATTTAGTTTCAGATTTGGTGCTTG TTAATGGGCACCATAAATAACTTTATGTTACCCGGCGTCAAAGATGACAT ATGTGTGTAATAATTTCATGCAGAACCCTGGTTGTAATATAACTCCCTCT AGAATGGAGATCAGTCTA

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.