Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA039544

[Submit comment/correction]

Sequence	AA039544
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA039544
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	ATGGCGTGCCTATATCACTAAGGTATTTTATGTGTCTCTTGTGTATCTGA TTTGAGCATATCATCAAGCATCTTCAGAACTTTGTAGTTTTGCTTGCTAG ATCATTTGTTTGTGTGCAGAAACATTCCCAAGTTTTTCACAATACCTAGA TATAACAGATCATGTGACCATGAAGGAAAACATAGCAGGATGCCTTGTGG ATATGGATCTGTTTCTTTTTGTATCCATCTATTGTTGACTTGGTTTTGGA GGATAAACATGCAATTGATGGAGTAGTGGTAAGACCTCTTCGTTGGCAAT TACCTGGAGAGGTTCTTCAATTGCAACATTGTAATAACAAAGCTTGGCAA ACTCTAATGGAGTTACTCACTTTCTTAGGTTGAACTCCTGAGACAAGAAA TCATGGCATTTGTTTCTAGCACCTCTGACTGATAAAGGTTATTAGTAGAA GTCACTTTTCACGTGCATTTGCTCGTAAAGGTGCTCTGGTTTTAATTTAC TCCCTCCGTCCCGAAATAGATGTCTCAAATTTGTCAAAATTTAGATGAAT CTCGACACTATTTAGTATATAGATTCATCTAAATTTTGATAAATCTAAGA CATCTATTCTGAGACGGAGGGAGTACATATTGCTTCTTGGTGAGTGCCAT ATTCATAAAATATTTTTTTCTTGCTGCACTACAGTGTGATCCGCATGTAA GATTTGGTCATTTCAAATGTACGTGGTTTAGGGCTTGATGTAAGTCAAAA TTTGTACTGATATGTTTTGTTAGATAGTCCGAAGACAACGTCCTTGAATT GTTTTTACCAACATGGTGCACACGATAGTATGATTTATTCAGTGGGTTAC TTTGGCCAGCTACTTAATTTAGTCAATTGATTTTTCTCTAGCAGTTTGAC ATAACGAAGCATGTCCATTTATAATAAGCAGATCTAGGCTTAGCTATAAA TGCCCATGAATTTATCAAGAATATTTTCAAGGACTTGAGACATATCACAT ACTTCATTTTTTGTATACAATATGTATTTTAATATGCTGAAACAATAGTA TCTCTACGTAAGATAGTTTATCTAGTTTATCCAGATAGTATAAAATCAGG GATGGTTTGCATACATTCTAGGTCTACTGGACAACACTACAACAACCATA TCCAAATAATACACTGGTAAGTGCAAAATAGAATGTGGATTGTAAACTAT AGTTGAGACAAGATCGATAATTGATGTGCAATGTCTTGAAGAAAACATAT TAATCTATAGATTGATGTCGTGCAAGTTCAAACCATGGACACAATGACTA TGCAAACTATCACATCCAAATACTTTTAGTTTGATGAACTTTATGTCCTG CTACAGAAAAGTAAGATATTTGTGGCATTGCGAATGAGGTAGGACTTCTG GTGTGCGTGCACGCTTGCGATATAGCATAAGAGAAACACTGTGTTTCACT AATTCATAAGTAATTTAATAACATCAATAATATTCATGTAGTAACAACTA AAACTGATGCAAGATGTATTTTTCTGTTTGGGAGACACTGATCCGAACCT TGGGTTTTTTTGTCCAGAGATCATGATGGGGCACAGCAAGCTCAAGATAA GGAGGACGAGATCGCGTTGAACTGGACGGTGATCTTTGCCAAGCACCGAG TCAGTTTGTTGAAGAAGGCCCGTGAGTAACACATCTTATGCACATCTTTG TTTGCCTATAGCAATCCATGGATAATTTTGGTTTCCTTTTGAATAGGAAA ACGAGAAACTTTATTATTCCAGTGCATATCATATCCTTTTTGTAATGGTG TGTCAAAGTTAGTGTACTATTGTTTCAATTTTGTATGTTGTCTCTCGTGG TTTGCATCACTTACTCTAGGCTGCTGCAGTGTTGGTGGGTGTGTGCTGTA CATAAAATTCAATAGTCATGTTCCTGGGCTAGAATGTTAATTGACAAGGT TTATTCCTCTTAACAACAAAGCTCTTTGGTTTCTTTTTTGATTAAGAATA AGAGAAACTCGGTGTTTCATTGATTCATGAGTAATTTAATAACATCCATA ATATTCATGTAGTAGCACCTGAAACTGATGCAAGATGTTTTTTTCTCTTT GCGAGACACTGATTTGAGTTGGGTTTCGTGTCCAGAAATCGCAATGGGGC ATGGAAAGATCAAGATAAGGAGGACGAGAACACGTCGAACCGTATGGCAA TCTTTGCCAAGTGTCGAGTCGGTTTGCAGAAGAAGGTCCGCAAGATCCGC GTGCTCATCGACACTGAGGTGGCCATATCATCTTCTCCAACACCGGCAAG CTATACAGGTTCTAGACTCAAAAGACCACGTAAGTTCTTTGCACCCTCTT TATGTTTCCATGGCTCTGTTTTCTTTGGAGATCACAAATATGGAATCTGT AGCTTGCTTCTAGGCTACCAAGGGTCCTGTAGAAGTACTAGACTAACTTT GATACTGCGAGATGAGAAGCTCAATCTGTAGCTTGCTTATAGGCTACCAA GTAGATCATGCACTTGGTGCAGCGGCACAACCCACTCAAGATAGGGCGGC CGCTCTTCTCCGTCCCCGGCGACTAGCACCGGTTCCCTCTGACGCTGTCC TCTGCCAGCCTGGTTTCAGGGCAGCGCGGTCAGGAGCAATGTTAATTAAG GAGAGGATCATCACCCTGATTCCCATAAGTTTCTGCTTCGAGCTTACTAG GGAGCTTTATTATTACCGATTTTCTTGTGTTTTGGGGTATTTGGTACGGA TAGGGTGAGGATTTACTGCGGATCGCTTCCAATTATCACACCAGTGTTGT AGTTGTCTAGGATTAGGATGTTGAATTTGGTGGAATTGTAGGAATCTTGT TTCTCTACTACATAGTTCGGGGAAGCTTAGAAGTTCCACTGATGTGGAGC TTCCGTCGCATTAGTAAACGTGGCCTCTATTAGCTGTTTGGTATCTGCTA TTTCACTTAGTTGCTTTCTCTAGGGTTGGAAATTATCACTTCGATTGCTT CTACCATGTTAATGCTAATTTAGCTGTTAATACTGCAAGTCATCATATAT GAACTTACCAATGCTGCAACCTAGAAGTTGTTGCTTATTTAGCTGATACC AGCACAATTTGCTAGAAACAACTGTTCTATTTGGATCTTCATGCTTATTC CCGGTTTAACATACAATTTCATAGTATTTATAGAAGATGTACATATAACT TTCTAGATTTATATGACAATTGGTATCTTGGGTAATTCAAACAACTTTTC AGTTTGAAGCCTAACATGTACTAGTTGAATACCCGTGCGTTGCTACGGAA AAAAATAAAAAAAATAAAAATACACTTCTTTGTGAAGATACAATCTCGTC ATTATTTTTTACCTCTTCACCCCTCTTGCGTGATCTTTTTATTTTCACCC GTGTCTCTTTGGCAACTACTCCCTCCGTTTCAAAATATAAGATGTTTTAG GTTTGTGAAGAAAATGAATCTAGACTTGTTTTAGAATCTACACACTAAAA CAAGTCTAGATTCATTTTCTTCACAAACCTAAAACATCTTATATTTTGAA ACGGAGGGAGTACATGCTACACAGCAAGATCACATTTGTCTTCCTCCTTG GTTCTTCCCGTTCTATTCTCTCCTGGTCTGCTATTCAGTCTCTGCTGCTA GCTCTTTTCGTGTTATGCCATCTTCACTATTGTCCGCAACTTTAATGAGT CTCCAACTTTCCATAGCGATCGAAGTCAAGTACGATGATGGGTGAAAAAC ATCAAGTGTTCCAATACAATGCAATATGGATATAATAGTGGTGCAGACAT GTGTATTCATAATTGCACTTAGTTTGCTCATATCTCATTTCACTCCTGAA GATGCATGCAATACATAAACTCAGATCAAAAAAAGAAAAGGAATACGTAT TCAAAAGGAGATGAGCACTATCCATAGAAAAAGGATTAATATTATGTGCC GCCTATCCTTAGCTTTTTTTCCGAAAGTGGGTCAAACTGCATTAACCAAG AAACTTATTGAAAAGCCCTGAAACAAAGAAAATTACAACAAAGTCCACCA GGACCCAGCATCGTCCTCGTCGCGCAGCACGCTACACCGGTGAAACCCGA CGCCACACCTCCACACGTTGACTGGACTGGGAGGATCCCCCGAGCGGCCG GGGAGTCGACGCCCCTCGGCACCTGAGTGCCTCCATCTTGCACCACGCAC GACGACGCCAACTTGGTCAAACGCAGCACCACCACCTAGATCTTCGATGG CCGGCTCCACCGTATCTCGGACACCGGCTTGGGGGAGACGCGCGCCACAG CTCCGGAGAGCCGCGAGCGCGGAAGGAGCGGCAGATCCGCCGCTGGGCTC CACCGGAGCACCACCAGCAGAGGCGAGGGACGCCGCCCACAAAAGCCACT CCTCCCACGCCGCCTCAACCTCAGCGCCGCCGGTTAGCACCCTACTGCTA CCAACACTATATACACGCCATGATCCGTCGATTCTCCATCCTCCCTCCGC CGAAGGGCGAAGAATCGGGTGGATCGACGGTGGCAAGGTGGAGCTCTAAC AAATCTCTGAAAAAACACGTCGGCATGCACGGTCAAATATTTGACATGGC AATGATGGCCTTGGCTATTGAATCTTATCAAATATCCACTCAACCTGAAG GGAATCTATCATCGGTGGTATTTGAAGTCTCCAAGTATATACCATTAGTT CAAATGTACAACTTAAACGTCGCTACCAAAAGAATGGATGGTAACATGAA AATAAATACAAAGAGAACTTAAGGAATACTGAATAATGAAAGATCTAGTG ACACACACCAAAATTGTTTTCCTGTAATGCTCCTTGGTACCAAGGTCTTT TTTCTCATTTACTGAAAAATACCAGTGGGCACCGGTATTACCGGTCACTA TGAATACCAAAAACACCGGCATAGATACTGTGCGAGATTTCTCAAACTAA TTTAGAAATTCATTCAAAATTCACAAAAACAGATGAATAACTGCCGGTAT TTTCTGTATACTGGTGGTTGCCGGAAAACCTGATTTTCGCCGAGATATCG GAAATACCGGCCGAGAAAAAAAAAATCCCTGCTTGGTATACATGAAAATT GTAAACCAAAGTGATGTTTGCGGGATCCCGATGTTTGCACCCCACTGATA ACATCAGCACTATAATCTTGTGATCCCACATACTTTGACGTAATTTGTAG AGCACGTGTAGATAAAATGCAGCTAGAAACGTTGGCCAGTGAAATGAATC AAACCATTGGGTCAGGATACAGAGACGGCTCATAATTTCCTTTGCTTCGT AGGATCAGAAAACCCTTTCATCTAGTACGAAAATTCACATTTCGGTTAAC TAATATCATCCTGCAGCACACGAAATAGTACAAATTAGTTAACAGCAACG TAGTTCCTGCCATATTGATTCTCCCCTACTCCTTCCTCACGTACTCAGAT CCAATATCCTCTCATCGTACTACAGGGCTTATTCACATATATAGTACTCC CTCCGTTTTAAAATATAAAAAGTTTTAGTTTTATGAAATAAATGTATCTA TACTACTTTTAGTATCTAGATTCACCCAGATTTAGAACGAATCTAGACAC TAAACAAAGTATAGATACATTTTACTCACAAACCTAAAACATCTTATATT TTAAAACAGAGAGAGTATATGTTAGTATGGGAGAGAGAGAAATTATAGAT CCGAGAAGGAATTGATACGTACCTATAGGTTGTACTCGTTGCCGACCAAT GGTGGATCAGTCTGCAAGTGCTCTGTACCACGGAAAGTGCAAGCGTCCTT CGCCATCAGACGAGGTGGTCTCCTCGGCAATATCAATATAATCTAGAGAA GGATAGTTTTTCATGAGGAGGGTCTCCAAGGTGCCAGGGTGGAAGGGACG TCGATCGTGTCACCAGCAGAAGATCGACGATGAATCTCGGCTGCCTAGGC CTCGGCATGGATCCTGAACTACTTGGTTTTAGATTGACCGATACGCCGAA GGAACGGCACGACATGGATCTCGAGCGGCATGATGGAGCCGCGACCTGTC CTTGCGTGTACATCTCGTTCAGGGCTTCCTCCATCTTGGGACATCATCTG ATCAAAGTTTCTTCTCCACCGTGGCATCGTGGTTCCTGAGCAGCAGTTCC CAGTAGTCTGTCAGTAGATGGCATAGTGCCCGGGAATGCGCTCGGTGCAG GTGGGGCTGGTGTACTCCGCCATGGACGCGACGTGCGTGCGGAGCCGTGT AGGCGCGAGCTCCACCGCGAGCTTGAGCTCGGCCTTGTCGGTCTTGTAAG AGTCCACAGAAAGCACAATGTTCTTGCGACGCACGAGTCGGAACTGCGGC GCCACCTTGTAGAACCCGATCAGGTGGAGGAAGTCGCTGACGCGGATCTG GATCAACCCGGCGTACGTGGAGACCACCAGCTCCAAATTAAGAGGATTGA CCATAGAAACCTGCCTAACTAAAAAAATAAGCTCTAACAAATACTACAGA TTAAGAGATTTTGGCCCAGGCGAATAGCAAATATGGGATTTGCGCCAGAT TTTAGTGCTAATAGAAGCGGAAGATAGTTACAAGAAGACTCAACGCGAGG AATTTCAGGAAGGAGCAGGTAGATATTTAAATGGATAGATAATTGTTTTG AAGTTCTGTTTATCGCCACACTTGTAGGAGGTAGATGAGGGTGGTTGCAT TTTGTTAGTTGAGATGAGGTGTGGAATGGCATATTGATTGTAATATCTTG AAGTGTGACACCAGGCATTCGCATCTTTGAAATTAATAGTAAAGATAGTT GTGCTTTTGGAGATATTCTGAATTTATCGATAAAGTTATCCATTGGGATT ATTGGTAGCTGGCCACCATTAATTAAGTCATACGCTGACTGCAACTATAC TTGACACTACAAATATCTGTTTTTCTAGATTTATGATCATTAATATGATG GATAGTTCGCACGGCTTTTCAGGTTGAAGCTTGACAAGTGTTTTCTGGAA TTATGCTTGAAAGGTGCAGTTGCAATGAAAAACGCTATTTTCTGGAATTC ATGTCACATGCGGTTTAAATCCATATTGCTCACTTTGGTAGCTAAAGTGC GAAAGGGGACCCATAATTCCTTTATTCTCCTCCGTGATAAACAAAAGCCA TAAAGATGTGAAATGAAAATGAGCAAACATACTTGCCATCTCTTTTTTAA CTCCAAAGGCAACCAATCTATTAAATTAATGAAAGATTTTTATGATGTTT TTTAGATGTTCACATGAATTATTACAAGGACATGGAGCGAGCGAGAAATA AAAGAATCACAATCTACCTATATACTAATAAGCATTTAAATCATTTAATG TGTGGTTTAGAAGAGCAATAAAACTGTATTATTTCTGTAATTTTGAGTAT TGTTGTCAAAACTGGGATGATGATTCTCGCAATCTCTTTCAAGTCATGTT CTATGGGAACCACTACATCCATTTGATGGAGTTGGAGGATGCTCGGCACA ATGGTGAGTAACATGTTGGAGTCAGGTGACTATGAAGTGACACTGTTGTT GGAGTGAGGTGACTACAAAGTACAATGAAGTAGTTATGAGAGTGTTCATA GTGGAATGGTGAAAACGAAGTGGAATGGTGAAGCCAATGGGACACTGAAA AAGAAGGAACGAGAGATTTACTTTGTTTTGAAACAAGAGAGATGTACTTA ATCATGCCTTTCGATTATTGGTTTTGTGTACGCGTATGTATGTGAGAGAT AAGTAACTCAAAGTTTTGTTTCCCTTGGCTGAAAGGTGAGA

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.