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GrainGenes Sequence Report: AA046782

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Sequence
AA046782
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA046782
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
GCCGAGATGCCCTGAATGCAACGGTGGAGACGGCACATCACACACTTCAC
TTCAGATTTCCCCCAAATCCCTTTCCAAACCCTAGCCTCTCCGTCTCCAA
TCCTCAGCTTCACCGAGACTTCAGGTCCCGGCGGTGCGCCGAGCGCGACA
CACCGGCAACAGGCGGTGCCACGTGACGCGAATTCCGATCTGGCAGCCGC
AACATCCCCCTTGCCGAGGTCGCCGCTGACCTCGACCGGATCCGGTGCTC
TTCTAGCTCGGCCATCGGATTGGGTAATGGCGCGGGGCTCCGCCTAGTCT
CCGGTTCGCCAACGTCACTGCACCACTTCCACATACACTGCAGCCAAGCT
GATCCTCTATTTTAACGACCGCCCGCCCTCAGTGGCTTTACACCCAGCTG
CATTAAGTATTAGTAGCTAAATGGAGGCCACGGTGCTAAGCCTGGGCAAG
TCTGTGGTGAATGGAGCGCTCAGCTATGCCAAGTCCGCAGTTGCTGGGGA
TGTAGCCTCGCGTCTTGGAGTCCGGCATGATCAGGCCTTCATCGCAGATG
AGCTGGAGATGATGCAGGCCTTCCTGATGGCCGCACATGAGGAGCGAGAG
GATGATGATAGGGTGGTCAAGGTCTGGGTGAAACAGGTTCGTGACGTGGC
CTATGATGTCGAGGACTCTCTCCAGGAATTCGCTGTCCGGCTACAGAAGC
AGTCATGGTGGTGCATTGTTCGCACGCTTCTAGACCGGCGTCTCGTGGGC
AAGCAGATGAGGGAGCTTAGAGCCAAGGTCGAGGATGTCAGCCGGAGGAA
CAAGCGTTACCGCCTTATCAATGACGATGGCTCCGTCTCCAAGCCTGGCG
CTACCTCCACACATGAGTTCCCCATTGCCGACATGATGATGTCCAGCACC
GATGAAGCAAGACGGCAGTGGGATAAAGCAAAAATGGATCTTCTTTGCTT
GATCAATTCCAAAAAGGATGATGACCTTAGAGTGATCGCATTATGGGGAG
AAAATGGTAACCTCAGAGTAACCTCAATTGTCAAAAAGGCATATGAAGAT
CTGAAGATGTGCAAGAAGTTCGAATGCTTTGCCTCGGTCAAGTTGGTGCG
TCCTGTCAATCCAACAGTGTACTTGCAGAGTATTTTGAGGCAATTTTTTG
TAAATTCACTACAAGAGACAATTATGGAGGCCCAAGATCTCAAGTGGATG
GCGATGACAAAGGAAAATGATTTGGCCGATGAGTTCAAGCGGTTTGTGAA
TACGAAACGTTACCTGATTGTGCTTGAGAACATACATACTATTCAAGAGT
GGGACCACATTAAAGTTTTCTTCCCAAACAACAAGAAAGGAAGTCGAATC
ATAGTGTCCACGGAGCAAGTTGAAGTTGCTAGCTTATGCATTAGACAATG
GAGTGCAGCAGCAGAGCACAAGCAGTTACATATGGACCATGTTCTCTATG
CTTTCTATGAGAAGGTATTATTTTTCTGTGAAAATATACTCTGTCTAGTG
CTACATTATATTCCGGTTCAGCTAATGCACTAATTAACAACAATATCTGA
CATTATGTTGCTGATTCTTAGTAGTCTTTGTGCACTATTTACCAACATCT
AATCTAGTCATGACACCACGGTGCTGAGTGTGGCAATGTATAATGGTACG
CTGATAGGAGAAAACATGGAAGAATCACAGCCATGTCATCCAAAAGTGTC
TTGGAACAATTTGTGAGGTATCGATGAAATCAAAACTTGGTTAATAGTTG
AAAGATGGCATATGTACTTCTTTTCCAAATAAAATTCTGACAAGAAATAC
ATTACCAGGTCACTTAATTTTGTAGACCTGTCAAATTCCTCTCATTCCTG
AATGGTCTATGGGGTAGACCAGGTCACATAATCCTCACTTTTTTCCTAGC
GTCGAAATTATCATTCCAGTCTGAGGGAATATCTGAAGTATATGAATCAA
ATTGCATTCATCAATTGATTACAATATTATGGCTTTGTCCTAACTGATTG
CAGTGTGATCATATATCAAAATATTGATGTTTGAGCAATTTCCAAACATA
CATGTAAAAGATCTACAATACTATATGCGTTATTACGCAGACACTAGTAC
CGCTGGGAAAAAAGACGTGAAAAAAACTTACCAGTTCCTACAATTTCATC
CTTTCGTGGATACAATTTTGCCAACTCGCCTGCTTTCTTTTCTCAGCCAA
TTTCCATTATATAAAACTTCTTTAGAGAATGGTGAAATGCATATTTACAT
TTGCATGATACATAAATGCATATTCGCATTTCTCCTACTTGCTTCTATTT
GAGAAGAAAGTTTACTTTCCTCCCCTAAACCATTAACGAGGTTTATAAGC
CACGACACTTTTTATCTCACATAATAATCCTTAAACTTCTAAATTGGGTT
ATTTGAGGTATTCTGCGAAAAGCCTGTTCAGGGTCGATTAATTCTGGCAC
GTCCTCTTCAACACATCATACTGTGGTGACACAGAACAGAAGGGTCCTGT
GGGACCAGCATCAACTTCTGCCATCCTGTTATCTTTAATCTCTCATGTTT
CTTTCTTAAGCCTTCCTCCTTACACAACACGGGGTGTCCATTCCAAGGTA
AAAAGGCTTGAGAGTCACACATGCAAGCGTCACCTCGTGCTTCTCTCAAC
TAGGGTTCCACTGTCCACCAGTGTTGGTTCTCTCCCAGCACGTTAGCATA
GGATAGTGCAGCCATGACAGAACAACATCTCATTTCCTTCCAGTTTTCTT
CTCTGTCGCTAATAGCATGACATGCTTCCTTGAAGAGCTCCACCATGGAT
GACTATTGCTGCTTGAGGTGGTAAGATCACCCTGAGTGGTGATCCAAAGC
TTCCTATTCTATTATAGGATTGGGGGATTTCTGCTGAGGACTGAATTTTG
TTACTGTGATTGGAGGTTGAGATCTGCATAGTTTAATGCCTCATTTGTGG
AATAATATATCATTAATGTGGTTGAAACTACCCAATAAATGTCTTGATAG
TTGGGTGGAAATAAGACTCGATTAAGATTCTTTAGATTCGTCTCTGAATT
TTGTAAGCTTATGCCAAATTTGTCAAAGCTTTCTGAAGTTTACGAAACCT
TGCCTATCAAAAATATTTGAACTCTCTGAAAAATGTTTAAACCCTCACTA
CATCACCTGTTTTCTGTTATCCCCCCCACCCCCACCTAGTCCAAGCATAC
TGTGTTCCAACCATAAGAATCTCGTTCTGACCGGTATCGGCTGTAGAGTA
TTTCATGGCAAAACTCTATGGACACCTTTGGTGGTGGCCATGGATTTCAA
TGGTATCTCTCCTTGGTGGCGATGAAGAAGGGAGAATGATGGGAGGGATA
AGATGCAACGAGGGGCCATCTGTGATGCTACTGAGTTGGTAAGATGATGT
CTACGGTGAATCGGTGATATATTGTCTGCCGCCGGCACTCTGACCATTAG
AGCATCTCCACTAGCGTTCCCAGGAGACCACTTTTTGGCGACTTTTTCAT
CCGGATGGACGAATTTCGCCCCACTTGCATTTCCAGGACACTGATTTCGC
CCGGATTTGGGCGTTTTTTATCTGGTGATCCCAGACCGAACCCAGCACGC
TGGAAATCGCCTGGGAACGCCGGATATAAATTTTGCATGCAGCAGGCCCA
CTGTCAGCCACTCCCTCTCTCTCTCTCTCCTACTCTTCTCCCCCATCCAC
CGGCCTAGGCTGGGCGGGGTTTGCAGCCGAGACGGTGTCCTCTGGCACCG
GCGAGCACGAGGAGGCGGCGAGCTCGGCTCGGGCCTGGTCGGCGTGGGCG
CGTCATCGCCAAGCTCGCCGCTGTGGAGTCTTGTGGTGCCGCCACGCGTC
CCCCTGCTACTTCTTGGGTGGGAACGCGGCTGGGAAAAGCCCATTCCTAG
GCCAAAATATACATCCATCCAGCGATTTTTAGGTCTGGATTTTGGCCTGG
GAACGTTGAACGAGTGGAGGTGCTCTTAGGAGCTCAGTTGTCTCTGCTAT
TCATATCTGTTAGTGATGCAGCTAAACTACTAAGAGCATTAGAGCCTTCA
CGTTCATCTGTTTTTTGTGCACATACATCGTAGGATATGTGGTTATTTTC
TAGGTTTATGTGTGTGCTCTGTGGCGTGTTCTTATGGTGCTTAGCCCATA
TAAATGGATCATAATCATAATTAGCATGGTTAATTCACTTACTGACTAAT
ATTGCTCTTGTATGTGAATTATGGCTTCTTTGACCGGCAAACTAGATAAT
GGTTACATAGTTTTTCTTAGAGATTATCTGATCGTGAACAATGGAAGGCA
TCATATAAACATTTGCAAAATTTAAAACTTGATGAATATTATTGGGGAGT
AGAAAGGCAGCGTCTAATCATTTATTTACTTGTGCATAGGGTTCTGAAGA
TCGAGCTGATGCAACTGATGCAGGGTCTAGCTTTACTGCAACCACTACTG
GTAGTAACAACTCTGCAGAGAGCAAGAGCCTCACCCGCACAGAGACGACG
GTAGCTGCCTTTAAAGAATATGAGTATGTCGGCCGAGAGAAAGAAAAATG
TGACGTTATCAAACTAATTTCAAATGAAGATGGCCAACAGCTTGAGGTGA
TTTCTGTGTGGGGAATGGGCGGTCTTGGGAAAACAACACTTGTTAGGGAT
GTGTACCAAAGCCAACACCTCAATGTGAAATTTAGGTATCGTGCTTGTGT
AACAATTATGCATCCTTTTAATTGTGGCGAGCTTATCAAGAGCTTAGCTC
AGCAACTAGATGGAGAGGATTATGAAAATAAGGAAGAAACAGGCTTGACA
GCTGGCAGAACAAAACCTAGAGCCCAACGGTCACTGGCGGATATTTTAGA
AGGAAAGAAGTACTTGATTGTTCTTGATGATTTATCATCTACCACAGAAT
GGGACTCTATAATTCAACATTTACCTACTAGGGAAACAGCAAGCCGTATC
ATAGTCACCACAAGGTCAGAAAATATTGCTAGGCACTGTTCTAAAAAACA
TGAAAATATATACAAGCTTCAGATTCTGGGATACGAGGATGGACTTAACC
TCTTCATGCAAAAGGTACCTCTGACCCTATCATGATGCATTCATGACCTA
TTTGTTTTACGGAAATTTATGTCAATGCCACTAGTATGGAATTATGATTA
TGCCACTAATTTTTCTATTTATGAAAATGCCACTGATCTACTAGTTTACT
TTTCGTTTTTGCCATTTGCAACTGTTACCGTGAGGTCAAACAAATTTGAC
TGGATTGACTGGGCTGAGAAGATGCGCTAGCTCTGCCGGAAGCAAATAGC
AGTGTCTGTCATTATTTACCGCCAACTAGTGGTAGCTATGTGTTCTTTTT
CAATTAGAACTGGCTTGGAAGTAAGTGCCGTTGGTACATCCCTCAAGAAC
AATTTCTTTGCAAAGTAATAGTCCCTCTGTTTGCATCCTGCAACCATAAT
ACATCTAAAGACATCATGCACCTTTCGTCTGCACTAAATCTAAAGACACA
CAAGTAATAGCTGCACCTTTCTGTCTTTCGGCCATAATCCATCAGCTGCA
ATTCCTAACAAAAATATGTACATGTAAAGAAGGTGAAAATAAAATCCAGA
CCATAACCCGCCAAATTTGGCTAACACAAAGATATGAAATCCATTCAGGC
CATAATCTATGTCTACCTGCCACCGAGGTTGGGGAGGAAGGAGGACGTGA
TCGCTGCTGGGAGTAGCTGGTCCCTCCTGAGTGTGTGGAAGGATAGAGAT
GCCCCTAGAGGGAAGGGGGGGGGGGGGGGGTTGAATAGGCAATTTAAAAA
CTATTACAACTTTGGCTTGAAAAAATGCGGAATTAAACTGATGATTTATT
TTATAAGCACAAAACCTAAATAAGCTAGGCTCAACTAATTGCACCAACCA
AGAAGTTAAGCTAAGCAAGATAGCACAAGATATAAATACTTTAAGCTCGA
TGGCTATCACAAGGAAGTAAACTTGGGTATAGAGATAACCGAGGCATGCA
GAGACGAAGATGTATTCCCGTGTTCCCTTATAAGTAAGGTATGCCACGTT
GGAGAGGTGTGGGATCCCATGAAGGATTTCCTAACGCCACGAAGCTCACC
TTATTCTCTAAGCCTATCCCGCGAAGGATATGTGCCCTTTCCTCATGGCT
AGCTTTTCCTCCACTCCGGAGATGACAAGCTCCACAACCATTTCACAAAT
CCCACGAAGGAGAAAGCCCGGGCCTCTTCACAATCTTTCACGAAGAGGTC
ACCGCAACACCAACCGCCAAGCCAACTAGGAGGTCACCCCCAAGAGTAAC
AAGCTCATGGTCTTTCACTCGAACATATCGTAATGGAGAGCTCAACACTT
ATGCAAGAATGCAAAGCAAGAACACCAAGGGTGCTCAAATCCCACCAAAG
CAACAAGTGCTAGGGAGGGATTAGAGAGGAAGAACAATGGTGCAGGACAA
CTAATGACTCCAAGATCTAGATCCAATGGGTTCCTCTCACTTAGAGGAGA
AATTGATTGGTGGGGATTGTTAGATCTAGATCTCCTCTTTCAAAGCCCTT
AAAGATGCAGGACTCATAGAAGGGTTGGAAGAGAAAACAAGCTCAATAGG
TTCAACAATGGTGGTAAAAAATGTGCTCAAGAACCCTAACCAAACAATGG
GGAAGAAGTCCCTTTTATAGGAAAAAAGCAAATTTTCCTGTTGGGGCCAA
AAACGAGCAGTCTAGGCAAAACCGGCGGAGCCGAACCGGTGACAGATCCA
GCGGAGCTGAACCGACGATAGATCCGGTGGGTTGGTTTGCCCGCCGAACG
AACCGGTGCCGCGCCGAACTGCTCCTCGGTATAGCTGTTCGGTAAGGCCG
GTTTGCACGTTGTTTTTCTAGACAGAAAATAGTGCTGACGAAAACGGTGA
TAACTTTTGCATCCAAACTCCGATTTTAGCAAACTTGGGCTTTTTGAAAA
GCTAAGAACAAGCTCTATCTAATAGCAAAACTGGAAATCCCAAGAAAGAG
CAAGAGGTAAAAAAGAAATAAGGAGAGGTATGAAACCTCCCTAAATGAAG
AACCGGTGAAAACCTCCAAAGTCAAAAACGCAATAGAAGATGCATGCAAA
TTCCGTTTTCGATGAACTTGGGCTTGTTGAAGAGCTAGCAACAAGCTCAG
GAACCTCACACGAAGAAACACCAAGAAGCAACAAGAATAAAGGGATGCAA
AGTATGTAAAGGATTGAGCTCCCTAAGACGATGTGATCAAGTTACCCAAC
CGAAAGCCCCTCTTGATAGTGCGGCTATCTATCCTATAACCCGGTCTCCC
AACAACCACCTCGACACCGATAAAAGGAAAACCTACTAAGGCCATACCTT
TGCCTTGCGCATCCCGCTTGATCTTGGTGACAACGCTTCAAGCTCCATTC
AAGAAGGAATGCTTCACTTGATCATTGCTGCTTCGTGAAGACTCATAATT
TGCTCCCCCATACACCAAGACACATCTTCACATGCCCATTATCATAGAAT
GGACGACAAGATTCAAGCATATGATCTTCTCAAGATGCTTATCTTGAACT
TACCCTTCTCAACCTTGATGACGATCACCACTTGATGTCATCCATTCACG
GGCTATATGAAATCTTTACTTTTGATGCATGCCCATGGAAGAATACCTAA
CCCACATAGATAACACAAAGACATATATAATGGGTTAGTTCATGAAGCAT
AATTGACAAAGCTTACCATACCACAAGATCCCATGTGGTACATTTTTATG
CTTCATGTGTTGACCAACTTGAATCCAATCTTCACTCTTTGTTTTGGTCA
ACCATGTATTTTCTCATGCTCTATCTAAATATCTTGAGATACATAAAGAA
CTCTTTATTTTATTGCATGCTTTAAATCTTAGTCAACCATAGCTCAACTC
GTGAGACTATCATGACACCGACTTAGAGCCATATCTTGATCTCAAGATCT
TTATCATCTATTGCTTAACACGTAAGCTTAGAGCATGGCTAAATTGAGTT
CCACACAAGAACTCCATCTTCATTTCTTCTTGATCATATCATATTCTTCT
CCTCAAATCGATGATCTTGATGCCAACACTCAAGGTATATCTTTATCTTC
ATGGCGTCCATACTTGAATCCAACAATTCCTTCATATAAAACTCAATGAA
AACATTAGTCCTTAGGGATTGTTATTTATTACCAAAACCACACATAGGGG
CAATGTACCCTTATAGTGTGTGTGGCCCACGCTCATGATGGACAAAGGTA
GAAGAGGTGGTGGGAAGCCCGGAGGACGAGGGAGAGCATTATCAAGTGCT
TGCGGCGGCGGCTGCAAATATGATCTGGGACCACATGTTGATGAGCTAGG
ACATTTTCTGAACAAAAAGAGAGAGCAGCTTGCGGCGGCGGCTGCAAATA
TGATCTGGGCCCACATGTTGATGACCCAGGACATTTTCCTAACAAAAAGA
GCCCCTTTTATTCAAAGAAGGTTTCACCTACAGGTAATGGCTGCAAATGG
CAAAGAAAAAAAAGAACCAGTGGCATTTAAAAGTAGTAGCACACTCACAA
GTCCAGAAGAGAATAGTGGCATTGACATAAATTTCCCTATGTTTTATTTG
TAATTATTACATAACAATAGTATATGTTTGTCTAACAGTGACCTTTTCGT
TAATGGATTTTGGAGCACATACAAATTGTATTTTGGCAAGGATCCCCTAA
CTAATTTAAGACGCTATTTTTTTTTTCCAAAAAAGGTAGCTAAAACCCTG
AGGGAGACCTGACTTAGTGGAGTTTTCATGTACCTACCTAGTAGCTACTT
GCATGCTTAATTTAAGAATCAACCGTACAATTTGTGTTTGGTAGTAGACT
TTTTTTAGCACAAATTCTGTTATTATGCTTGCAGATAATTTAATTTTGTG
GCAACTAAAGACTAAACTTAAATGCATTTCAGGTATTTCAAAAGATTACA
TATCTGAATGATGAACATCCTGAGTTGGTTGAACAAGCAAATCTGATCCT
AAAGAAGTGTGATGGACTTCCCCTCGCAATTGTCACCATAGGTGGTTTCT
TGGCAAACCAACCTAAAACCGCTTTGGTGTGGGCGAAATTGAATGACCAT
ATTAGTGCCGAGTTGGAGTTGAATCCAGAGCTTGGGAGGATAGCAGCAGT
TCTTAACAAAAGCTACGATGGGTTACCCTATCGTCTCAAGTCATGTATGC
TGTATTTCTCCATTTTTCCCCAAGATAACAAGGTTAGCCGGAGACGTCTA
GTGCGTCGGTGGACTGCAGAGGGATACTCAAGGGAGGTGCGTGGCAAGTC
GGCGGAGGAAATAGCAGAGAGCTACTTCATGGAACTCATAAGCAGGAGCA
TGATCCTACCATCTCAAGATTCCATTCATAGTAGAACAGGAGTTGACTCC
TGTCAAGTCCATGATCTTATCTGGGAAATCGGTATCTCAAAATCAATGGA
GGATAATCTTGTTTTCACATTGGAAGATGGCTGTGGGTTAAATAGCCGGG
GTACGATACGCCATCTTGCCATAAGTAGCAGCTGGGAGGGAGATCAGTGT
GAGTTCGAGAGCATAGTGGACATGTCTCATATACGATCCTTAACAGTGTT
TGGGAAGTGGAGACCATTTTTCATGTCTGAGAAGATGAGGTTGCTGCGGG
TGCTGGACTTAGAGGGCACATCAGGTCTAGTTGATCATCACCTTACAGAC
ATTGGGAAGCTTCTTCATCTAAGGTACCTTTCTTTAAGAGGATGTGATGA
TATTTACCACTTGCCAGACTTGTTGGGCAACCTGAGGCAGCTGCAAACAC
TAGATGTTATGTATACAAGCATAATCAAACTACCAAGGAGCATTATCAAG
CTTAGCAAGCTACAGCATATTCGTGCTGGGGGCATCGGAAGTAACGATGG
TGGTACACATGAAACATATGCAGACACCCTATGCATTTTGACTTTGTCGT
CAATGGCTTATTGTGTGGCGTGTTGCGCACCACAGATTCTGAAAGAGTTA
ATGGATATGGATGGTGAGCCTAACAGGCGTGATGTATGCACTGGGTGTTG
CTGCAATAAATTACCTTCTGTGGCAACATGCCAAAGTCCAAATGGTGTTG
AAGTGCCAAGAGGGACTCGTAGACTGAAAGCCCTAGAGACACTGGGTGTT
GTGAACGTCTCAGGATCAAAGGGTAAGGCTACTCTAAACGACATAAAAAG
TCTTGCTAGGTTGCGTAAGTTAAGAGTGACCGGCATCAACAAGACAAATT
GTCAAGAGTTATGTTCAGCCTTGTCACAACTCAGTTGCCTGGAATCGTTG
TTAGTGCGTTCAGAGGGAAACCCTGGTTTATCTGGCTGCTTGGATTCCCT
ATCGTCGCCCCTGAAAAAACTACAGAGCCTGAAGCTGTACGGTAACCTGG
TAAAATTGCCTGAATGGATCGAGAGGCTCCGAAACCTTGTGAAGATGGAG
CTACGGAGCAGCAGGATATTGGAGGTCGATGAAGCCCTTCACGTCCTTGG
AAATTTACCAAACCTGGCCATACTACGTCTGTTAAGGCACGCATTTGCTG
GCGAGAAACTTCGTTTCAATTTCGATTGGAACACAGCATTCCCAAGTCTA
GTGGTGCTGGAGCTCAGTCTCCTGGATGACCTCGAAACAGTGGAGTTCCG
AGGAGGAGCAGCACCTATGGTTGAGTTGCTGCAGTTTCGTGGATGGCGTT
ACAAAACCAACGCTGTGTTGTTTCCTGGACTGCCATCTCTCCTGAGCCTC
AAGGAAGTTTTGCTCAAGGGTCGGTATGAGGATGTCTTCATTGATGACTT
GCGGATCCAGCTTGCAGGGAACCCAAATCGTCCTGTTCTGAAGGTCAACT
GAACTATGCTTCAAACTAGACTCACATGATTGACTGATGAAACTTGCTCC
TAGTATCTGCTGTATCTATATTCGTGTTGCTCATAGTACTATGCATGTTC
AGTTGTAAGAGTACAGGAATAAAACTTGCAAAATTTCTTGAAGTACTTCC
TCCGTTTCAAAATATAAGATGTTTTAGGTTTGTGAAGAAAATGAATCTAG
ACTTCTTTTTTGTGTAGATTCATCCCAAAGTTAAGTGAACCTATATATTA
AAACAAGTCTAGATACATTTGCTTCACAAAACTAAAACATCTTATATTTT
AAAATGAAGGGAGTATTAGGTGTCTCTTAATTTACTACTTCCTCCTTCCA
CTAATGTAAGACCTTCTAG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.