Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA041701

[Submit comment/correction]

Sequence	AA041701
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA041701
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	AATTCTTTTGTCTCCACTCGTACGTGGAGTAGATAGGAGAGCGAGAGCAT AAATTCTGGATTTGGTGCAGGAACCTCTCGATTTCTCAGTCTCAGGCACC GGCGTGCCGTCACGCACGGTGGTTGGGGCCTTGCCGCCTTGGGGGCAGTT CAGCGGTTGTCCTTGCCGCCGCGACAATCGCGTGCTCCGCCTCTCCTCGA ATTCATATATACGCAACTCTCTTTCTCCCTTCCCCCGGTCTCCAGCGCTC CCACGCGCGACGCGATCCAAGACCGACTGAGCGAGCGACCGCGCGGGCCA CGGCGGCGGCGGCTAGGGCACATTCACGTCCCCGCGTCGCATCCGGGCGC TAGCAGCCCCGAACCCCGCCATGGCGGCGACCGCCGTCGCCGGCGGCGAG TCGGCCGTCGAGCTGTTGCGCCGCGCGGCGGCGCTGGTGCCCGCGGAGCA CTACGCCTTCGCGGCCATCGCCATCTTGTCGGTCCTCGGGTACCAGTTCC TGGAGCTCCACGTCCTCGGCGACCTCCTCCGCGGCCTCCGCGGAGGCCGC GTCGACCTCGTCTTCCACCCCGCCTCCGAGATCTACCACTGCGTCGCCTC CAAGTGCCGCTCACTCCATGGCAGGTATGTACGGCCATCTGTCGGGACAT TGTAGTTATTATTACTTTGTCTGTACTCTGTCGACATGACATCATTGGTG CGTTGGACCGTGATGTTTCTGTGATTCCTGTCCTTACTTCCCAAAAGGTG GGTCAAAATTGGTAGAATCGATAGGATCACATTGTGATCGTACTGTAATT GGGATGGATTAAATATAGGCACAGAGGTTATGGTCAGAGTGTGGATTCAT CTTGTGATTATGCAGGTACCTGGCGACTCCATGGCTCGCGAGCCCGCATT TGCAGACATTGTTCCTGGGAATCTCTGGGAGACCACCTTCCTTCACGTAC AAGAGGTTAGACTAGATCCTTTTTTTGAGATGAGTTAGTACGACTCTACG AGTGCATTGTAATCTTGCAAATTCACTAATTCAGTTTAGTGTCAAATCCA AGTGGACTCTACACCGCAAGTTATTCTGCTACTTTATACAGCATAAATTC AAGTGCACACTGGACTGTATATTCTGCGTCGAACAAAAAAAAGTAACTTG TGTGGTTTAATTTGACTGTCAGTAAGTTCTGCTACACTGCTTCTGTTGCT ATTCATCATGTGTTCTCGAAAAACAACAATGAGAACAGCATTTATTTGGA ATTATAGAATGTGTGAAAATATATGTCTCAGTCGGCTTGAATGGCCTCCA AAAGAGTTGGGCATACTTTCATCTTCTTATTTAATTTCTGAAGTTAATTC TTGTGGGCATACTTTTTTCTGTTGACAATGGCCGTGTACATCCTCTGTAC TGCAGGCAGTTATACACACTTCGTGATGGTGGAACCCTTGCTTTGGACTG GCTGTTGGCCTCTGATTTGGAGGGTATGGGCTCATTGACTGTAGAACTGT AATATACATTATCATATATGGTGATTTCTGACCATTTTAGCTACGTGGCA GATGAAGATGGGATCATTTCTCAAGATGCTTCGACGCCCCTTGTAGTTGT GGTCCCTGGATTAACTAGTGATTCTGATGCTGCAGTTAGTCCCTACCTTT TTTTGGATGTTGGTCCATATGTGTTGCTAATTTGAAGGCCTCTTTGGTTC ATGATTGGATGACTTATTATTTTTATTAATCATTCTAAAGATGTAGTTAT TTATCGCAGTATGTAAAACACTTGGTCCATTCCATGGCGACAAAAGGCTG GAACGTTGTCGTAAGCAACCACAGGGGTCTTGGTGGTGTGTCCATTACAG TAAGTTACCTAATGTAAAATTTCAATTATTTGAATTTCACTCTCTAGCCT CCATGTGCACTTAAACCTTTGCTACACAATTATGAATTCGTGATTGCTGT CTGGAGCTTGTTCGTCATGCGTAATTTGTAACCAAGATTTATATCTGTTG AGTCATAAATCTGATTACCGTAAAATGATCATAAACTGGCAATGAATGAA TTGATTTGGTAAGTAACCATCACTCAACACATTGTTTGTTCTCCTGGCAG TCAGATTGCTTCTACAATGCTGGATGGACGGAAGATCTCCGAGAAATTGT TCATTATCTCCATCACAAGTTTCCAGAGGCTCCAATGTTCTGTGTTGGCA CAAGCATAGGTGCCAATGTCCTGGTACCTTCTCTTAATCTAAAATTTCCT TCTATTTTCTGCCACTACAATTATCTATTCAGTAGTGCTACTGCTAGTTT CCCAGTTTACCATGTACCAACACCACTGGGCGTTGGCTCTAGAAATTTGC ATAACAATGATCTGATGTAATGGTGGTAACATTTTCTCACTCAATGTGTT TTGTGCTTGGGCAACCATTTAAGTTTGATTTAGTTTTTAAATTATGTCTC CTTTCTATAGTGAGCCTGAAACCAGAATGAACCTGGTTGTGCAGGAAAGA GTCCGAAACCAGCCAATCTCCAAAGCTAGCACATATGATGTTAAACTATC TATTATTTCTAAGAAAAGTAATACTCTGTTAGTTTATTTTAAGACGCATC CACAACTAATGAAAAACTTACATTCTTTTTCGTTGCCAATAACTCCCTAA CATTGGCTACATGTGTATTCTTTTTCTTTGCCAATAACCCCCTAACATTG GCTATGTTTGCAGCAGTCTGTTACTCCAGGTCTCCTTTGAGCTTGTTTTG AATGCATGATAGTGTGTTTTGGGGATTTTGGGTTGTGTTTTCATGCACAC ATCCACTTTTAATGATTGGTCATTTGAAAATCCTTGTTGGGTTATCACCA ACTCCCATGCTACTCTTTCTCAGAATCCCTAAATCTGCCACCTATCCACA CGCCACACTAGAATAGAAATATATGCCAAAGTATGTCACTGGATCTTAGA GAAATCATAATTGATGTACTAACATGTATATTGGATCCACATATTTTCCC AGGTCAAGTATCTTGGAGAAGAAGGTGAGAATACTCCTGTGGCTGGTGCT GCATCTATTTGTTCTCCATGGGATCTTTTGGTTAGTTGCTGCACCTAATT CACTACATTACATATACTTATAACTGCATATCCAAATTTACTTGCATGCT TGTTTTGGTAGAAATTTGTAGCAACTTTTATCTCAATAATTTTCAACTTA GTTTGACCAATCTTTCTCAAATGCCTTTGTCATAAAGGAAGAATTGAAGA GCCATTGCTCACAGAATCTTTTGTTTCGAAATGGAGAGCCTTGCTTCGGT GTCCCCCCCTCAAGGGAAAAGTTGAGGAAAAAACTGGTTTTAAGGGTCCG ATGGTGTGTTCCGGGTTAGATTAGGAGCCAATCTATTACGTATTTGAGTC TGGTTGTACATGGCGTCCGTAGGGGTAAGCAAACTGCCGGTCCCACTCAT GGTAATTCCGATCCAGATCGCATCGGTTATGCACGTGCGCCTTCTGAGCT GTGGATTTTGGTCGTCAGAGCAGCTTCACTCGTTCGACGTTTCAAAGCCC AATTTTGATGTTATTTAGCGTCGCACGAATGTAATATTTGGCTTGTGAAC AATCAGTTTCTCACTCATGTTTTTAGGCCGAGTTTCTGGTTTTGGCCAAA TTTTAAGCAAACTTGGCGCAATTTAGACGAATATAACGATTTCGTTAATA CATAGGCGAGTTCGTAGATATTATGTCAAATTGACATACAACCGAATTTT GACTGCATTAGGATAAAAGAAAAACATTGAAATAGCTACTAGGCGATGTC GATGCCGACGGGCACCCCGTTTACATGCCGAAGTTGTGGTAGAAGGCGGT GTAGTCGGCGTCCCGGATGCCGTCGTCATCGCTCGACGGCTGTGGGGGAC ACGAGCTGCCCTGGCCGGCGTCGCCGTAGCGCCATGGATGAGACGAGGGA TTGGTCTCGTCGTTGTCATCGTCGAGGACGATAAGTGGCGCGCCCTGGTA GGCGCGCTGCCAGCGAGCGACGCGCGTGGCCTCGCGTTCGGACTGCTCCT GATGACGCCGAACGCGGTTGGCCTTCTCGCGCTCCCAGTCCGCCCTGGCG CAGGCGTCGGGGGCCCGTATGGGTGGCACATCGTTCAGGGAGCGCTCTAG TGCCATCTTCTTCAGGACGAAGACATCCTCGTCGACGGGAACCGCCTAGT CCGCCGGCTCGGGCATTGGCGTGCGCAGGCGAAGCCAGCCGGTCGGCGGT GATGGCGCGCGGCCTTCGTTGATGACGAGGCTACGTGAGCACGTCCTCAG CGGCCAGCGCATCGGCGACTCCATCTCCCGCTTCACCGGTCGGAGCGGAG GCGTGGCGACTGTGCCGGCGCGAGGTGACTGTGCCGGCGTCGAGCCAGAC AAGCGCGGCGCCGATGCCGAGGAATACGAAGAAAGGGAAGCCATCCTCCT CGGCAGCCAGTTAGCCGCCGCACGGCGTCGGGCGGTCGATGGCGGGGAGC AAGGAGGATAGCCCAACTTAGGGCCGGCGCTGAGCTCCAGGTAGCGGCGA AGGCTGAAAGAGGATTTTCTTAGGACTGAATTTTCTTAGAGCTTCCATCG CCGCCGATCGGCCGTCTTCGCCTGCGCACGTCGCAGTCTGAGACGGCGGA CTAGGCAGTCCCCGTCGACGAGGACGACTTCGTCCTGAAGATGGCACTGG AGTGCTCCCTGAACAACGTGCCGCCCATGCAGGCCCCCGGCGCCTGCGCC TGGTCCATGGCAGACTGGGAGCGCGAGGAGGCCTACCGCGTTCGGCATCA TCAGGAGCAGGCCGAGCGCACGTCGCTCGCCGGCAGCGCGCCTACCAGGT TGCGCCGACGACGAGGAGGAGGCCGGTCCCTCGTCTCAACCATGGCGCTA CGGCGACGCTGGCCAGAGGAGCTCGTGTCCCCCGCAGCTGCCGAGGGACG ACGACGGGGATGACGACGGCACCCGGGACGTTGACTACACCGTCTTCTAC CGCAACTTCGGTATGTGAACGGCGTGCCCGGTGGCATCGGCATCACCTAG TAGCTATTTCAACTTTTTTTCTTTTAGCCTAATGCAGTCAAAATTTGGGT GTATGTCCAAATTTGACGTAATATGTACGAACTCGCCTATATTTGTCCAA ATTTCGCCGAGTTTCCTTAAAATTTTGCCAAAACCAAAAACTCGGCATGG GAACGCGAGTGGAAACTGACCGTTCTTAGACCGAATGCTACATCCGTCCG ACGCTAAATAGCGCTAGAATTAGGCTTAAAAACACAGAACAAGTGGAGGT GCTGACGACCAAAATCCACAGCTCCGAAGGCCGACGACACAGGCGGTATC AGCAACGATCGTGCGTGACCAATGCGATCTGGATCGGGATTACCACGAGT GGGACCGGCAGTTTGTTTCCCCGTACTGACGCCATGTACTACCAGACTCA AATACGTACAATGGTAGAAAAAATAACAGAGAGGATCCGCTCCTAATCTG ACCTGTAACACACCATCGAACCCCTAAAACCGGTTTTTTTCTAAACGTTT CCCTCAAGGGGGGACACCGAAGCAAGACTCCGAAATGGATTGCTCACAGA ACCTAAGAGCAATCTCTCTGATGTTTTAATTTAGTGGTAACTTAGGTTAG CCTGGCACTTGGAGAACTTCCTGGAATTAGTTTTGCTTTACTATTTATAG ATGCATTGACCAATTCTCTTCTCTACAACTAAGTCTGTACTCCGTCCTTG CTAGAATGTAGTGCATTTTTCAAAAATCAAACGATGTAAAGTTTGATCAA GTATGTAGAAAAAATATCAACATCTAGATTACCAAATCAATACCATTAGA TTCATCATGATGTATATTTTTATATGGTATACATTTGGTATTGTAGATAT AGATAATTTTCTGAATAAACTTGGTCAAAATTTACATCGTTTGACTTTTG AAAAAACTTATATTCACTACATTGTGGCAAGGAGGGAGTACAATAGTTTC CACAATGGAAAGCCAAACTAGCCCTTTAGCATCATTGTGTTTTGTCATTT AATAACTTTGACTTTCTAGGTGGGTGACCGGTTTATTTCACGTAAGCTTG TGCAACGGTTTTATGACAAAGCCCTTGCATTTGGGTTAAAGGGCTATGCA AAGCTGTAAGTATCCATCCTTCACTAAACATTTGTACACGTCTCTTTCTA TGGAATTTACAGCTTTTAGGTTATGCATATTTTTTTTTTTCTGTTGGCTT TGTGTCATATGCTCTTCCTTTTAGATCTCTGTTATTTGTATATTCTGAAC CTAATTTTAGTTGTTCTTTCAATCAAATTACTAAAATGCTCACTTGAATA GAAGCTGCGTGTGTGCGACCTTAGTTCAGCACAATACCATTGCTTTTGTA GTTTTTTAATTATTTTATAGCTTGTTCATGCATGTCTATATCTTGTAAAT GTAATGGTTGATAGTGATGAGCAAGTGAAAAGTTATATTTTGTACAGAGT TCTGCAGACTGGTATGATATGATATATTTCCAATACCAATCACCTCCACG GTGTACCTGTGCTTGGTTTATGCTAGTATATAATGCTCTGTGTTTTCACT TTTGGGTTGCCCGAGTCACTGGGTGCAAGTGGTACACTTCTGATCTGGTC TCAGTATGATACTACTTCTTGCACAGTAGTCACAGGCATTCATGACAGTG GATACAAGTTGTAGCTTGTAGCAATCAAATGTGCAATTGAATAACACGAT GGCTATTCAGCAAGATGACCCTTTCTTTATATGCCTTGCGTTTTCCCTAC TTGCAGACATCAACCTATTTTGGCACGACTTGCGAACTGGGAAGGTATTA AAAAGGTTCGACGCACTCTTCTGCAAAAACAAAATCCTAACACTGAATAA GTTTACGGGATTTACTTTCAACAACCCTTCAGTAAAATTAGTCACTTCCA TTTTATGGAGGTAGAGTAACTACTTGTTGACATGTGCGGTTATTTATAAT TTGCTACTTAGTTTTGTAAAGAAAAATATTGAAATTCAAACTGCCAGGAG TATGACTATGTACTTCTCTACTTCATAAGTGATAGAATTTGTGTAGGGTA GCTCTTCATGACTTGTGATATGCATTACTTATGTTCTGTTATTTCTATTT TACCAGTCATCCTCTATCCGGGATTTTGACCGCCACGCCACTTGCATTGT TGCAAAATATGAGGTACCTTCCTGGCACCATGCCTACCTTTGCTGTTCCA CTATCAATCAGATGAGAATCTCGTACTTTTACTGTTGCTTTCATGGCATG CCCACCGCTCTGTAATAAAGCATAAGATTCAGAACTGCTGCTGTAACAGC TAAATAGTCAATTGTGTTGTATAATGTGATAATCTCATCACTCACGTACT GACTTTTTATTTCTCAGACTGTGGATACTTACTATCGCCGGTGTAGTAGT GCTAGTTATGTTGGTAATGTGTCAGTTCCCTTGCTTTGTGTCAATGCTTT GGATGACCCCCTTTGCACAAGAGAGGCAATTCCTTGGGACGAATGCAGGT GTGTTTTTAGCCTCGTCGAAGTTGTTCTCCTCAATATCCTCTTTTTATGT GTTCATCGGAAGGATCTCTGTTTGATTTAGAGCGAACAAGAACATTGTTT TGGCAACTACACCGAATGGTGGCCATCTCGCATTTTTTGAAGGAGTAACT GCTGGAAGACTATGGTATGGCGATTGCACTAAATCTGATATCTAATCCAT CCATGTTATGGGTTGCATATTTCTGCTGCATGTATAAATCGTTTATTGGT AATTTCGTAGGTGGGTTGGAGCTACGTCGGAGTTCCTCGGTGCTCTGCAT GACAGCTCTTACATGCATCGGGAAAAGGTGCGGTCTCAATTGGAAATATT TCAGCCCTTTTAAAATGTGTTTTCCGTAATGGGGGCATCTGCTCCTGTGT GCCAAAACGGTGCCTCCTCTTTATCGTTATTCAGGGATGAAAATATCTAT CTTGGTGACTTAAATTTCGTTATGGTGGTTAAATGGTTTAATCATGTCAT AATTGAATGCAGGCAGAAGATCATGTTTTGCACTCTTCACTGGAGTCGTC TATTGATAAGAGCCCATATGTCAATGTCCTGGGAGATGGACTGGTAGCTC CAGCGACAGATGACGTGGTGAATGAACTGAAACTGGATAACGGGGTGAAT GGTACACAAGAGAATGAACACGCCAAGGAAGCTGAGAATAGAAGTGGCGG CATCGAAGTAGATGCAGTGCCTGTCCAAAGCCCTGCAGGATCTGCAAAAC AGCAAGGGGAGATGGCTAATCTGATCCACGATGCCATTGCTCCTGTAAAG AGATCCATGAACCGACTGACTCGATACCAAGGGAGGTCAGTCTGGCTGCT CGCCTACATAGCTTTTGTTACATCATGGCCGCTCCTTGGCTCCCTAGCTT TCATCGTGTTTAGGAAGAAGTTCAGGAATCCCTTTTCTGCCAAACAGTAG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.