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GrainGenes Sequence Report: AA004817

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Sequence
AA004817
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA004817
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
CAAAAAACCCAATAAAATCTCGCATCCTAGTCCCGTCGCCTAACCCCATC
CCCACCTCCACGCGCTGCCGGCGCCTCCTCCCGGCGAGCCCAAACTCTGC
CGCTCCGCTGAAGCTTCCAAAACCCGCTGATAAGCGCGGCGCGGATAAGT
TCTACCCCCCTCCAGTTCGTCCCCACCCGTCTCGTCCCCGGTATCTCATC
GGGCTGGATCTAGGGTTGCAAGGGGAGGGGTTCTGGAGGCCTCCGCCACG
ATGGAGGCGGCCGATCTCGCCGGTGACGACCGCACTTTCGCGGCAGACTT
CACCAAAGCCGGCTCCGGTCAGCTACTGGAGCGCATGCGGGAGAAGCTGC
GTGAGTTCAAGGATGCCGAAGAATCCGTCGCGGTAAGATGTCGCCACTCG
ACCCCCCGCCCCTTCCCCTGTTAGGTGGCTTCGCGCTTGTGTGTTGCTGT
GTCCGTAGTTCTGCTAGTTGTGCTATCGTGTGACCTTGTCTTGTGCTTCT
TCTCCTACTTCCTCTCGTATTATGCGGTTAGATCTTACAATCTCACTAGT
TCGCAGCTTTTGCTTGATTATTTGCTTCCTGGAATTTAGGTATGTGTTGG
ACTATAGCGATAACCGTCGGTTCTAATTTCGTGTGCCTAGTCTCATGGAC
TATATTTACACTGTATACTGCGCCTAGGCGAATTCAGCCGGTGTAATAAG
CCAGTAGCACTGAAGTAATGTGTAATTATGCTTGGTCTGTAGGACTGTGA
ACATCATGTATATTTGTTCCATGTCCCTCACTGGAGGTACATTTTACAAT
GTGACCATAGAGTAGGAATTCTTCTCTTATATTTATTTGTACACTGCTGA
TTTTTCCGTGTAATCCAAGAATGGTTTATTTATTCAGCACAACTACATCA
GTTGTTCAGGAACCATGGATCCAATTTCTCCATTTCCAAGTATTAAGTTT
CTGCACTTATGTACTATTCGCTATATCATGTTGTACTATCCTTTTACCTA
CACTAGATGGAGCTCGATTTATTGAACTTGTGCAGAGCATGAAACCTTTT
TTTGAGGTAATGCAGCTTGAAGCCTGAGCATGCTTGTGCATAGGGGAAAG
TTGATTAAATGATAGACCACTATCATCAACTCAACTCTACCTCAGGGCCA
TACTCAATAAACCGGTGACTTGTGCTAATAAAGTTTAAGGCCTATGTCTA
GAAATTTCAATTAAGTTGATTTCTTAAATGGGTGATTATTTTTCTTAAGT
ACTTACATCTTGATAAAAAACAAAATATCAAACTCTAAGCGCGCCGTCCA
TTCAGAATTATAATCGCTTATTTTCCAAAGATGAAACTTTGGGCGGTGAT
TACTAACTGTATGTGAATTATCGAGACAAAATTAATATCATTCAAAATTG
TTTTTATTTCAACACAATATCAATTTTGTATTAGGCAATCCATATTTTAT
TTTAGGAACTCCATATTTTGTTATAGACAAATTCTTGCTCAAATATGTAT
TTAAAGAAGTGCGTGTGATTTATATTTCTGAATAGATGGGGTACTGCTGT
AGTACTGTATCTTTTAGTTGGACTGCTCTAATAGATGGGTGTGGCCAAAC
AAGATAGTCCACCTTTAGTAGAACAAATAATGCATGAGAGAACGTTTGCA
ATGAAAGAACAAAAAGTGAGAAATGAGAAGAAAAACACCTACACGTAGAT
AAATGAAATATTGGACTGTACCAATTTATTATCAGCAACCGTATTTTGGG
AGTCTGGAAAGAGCAAGGATCAAAAGGTCTTACGGGTTGGGAGTTGCTGG
CTTTGCGTGAGTAATTTTCCAGTGCACGAGGTCTTCCTTTACTTTAGTGT
CTAATTCTCAACTGGTCATTTGATTAGTAAAATGTGAGTCCTTAGGGAAA
ATTTGGACCCCTACTTTTTGTGGGCCTGTGAATATGCACTGCCCTCGCAC
ATGGTATTACATGGGCTTGCTCCTTCTTATTTTTACTGCTGGTCTTAGCC
AAAACTGTAACAATGAAAGTGCCTAATCATTATTGGAAAAATGTGTACTT
TTCATGTTGTTTTTGGGATTGGCTACAAAACCTCTGATGGAAAAAATCTG
CTGCTTAGTTGTTTCCCCTACCTGCAGGCTGCAGTGAATGCCATCATTTT
AATCAGAAAGACTGAAGTTTGTCATGGAATACATTGCTCCAACACTTCTT
GTTATCACAATGTATTCATTTTCTCGAGCATTAGAAACTTAAACATCGTA
TTCTCTTTCTCCTATTGCTTCATTACATTATATGTTTATAGAAAGAACAG
TAAATGAACCTCTGTTATCTTGGTGCAGGACTATGTTATTGTGATGCTGA
AGAGTAGAAAGCGCAAGGATGAGGCCAGTAAGGACCTCCATATTTTTCTG
GGAGTTGATGATAGTGCAACGTTTATTTCATGGTTAGTACTCATGACATG
TGATATGTATTTCGCTGCACGTGAACTAAGCGCATGACCAATCTCACTGT
ATTTGTCCACATTTTTCTCCATATAATCATTTACCATGCAATATTCACTT
ATGCAACATGAAGTGGTTTGCACAGTTTATTGTAAATCATTTTTGCACGT
GATAACATAGGATTCACAAGTTAACCTTTTTAGTTTTTGCGCGGGTTTTT
AGTAAGTTGGCTACTTATTTACTACAGTATGACCCTGCTTTGTGTCTGAG
AAGAGGTTAAGCCCCTCTTTCTAACTGGATTATTGTTGTATACTACAACA
ACAACAATGGGCATGGATATTCTTTTGGGTACTATTGCAATTACAAGGAA
TTGATATTCTTATTGTCTTAGCAAGTGCATATTGAACACACCATTGAACG
TCCTTGTAGGTTGTGGGATCATCTATCTTTGAATTTGCACCTATATGTGC
AAAAACAAGAAAAGCGCGAGGTGGAGAACAAGGATCATGAACCAAAAGAA
CCATCTGGGAGACGTAAATCATCCGAGGTGCACTCGAATGAGCATACAAG
TGAATCAAATCCGACCACCAGGAGTCAGAATAAGAGGGAATGGAAAGGAA
CTGGTCGAGAGGGTAATAGAAACTTTCCACTACGAAGTGTACTAACGGAT
ATTTTGCACGGAGAAGAGAAAAAGCTGCAAAAATCTATTGAAATACGACA
GCCTCCATCATCTAACCAACGGAATGGCAGAAAGCGTGATAGGGAGGACG
AACTACAACAAACAAAGGTGCGTAGCAAATCTTAATAAAGGGTGTGTTTT
TTGTTAACCAAACGGATTTCCTGCAACACTGGACTTTCATGTCTACCTGT
TCTTTACTTCGCCATGCCTTGCTTTCTTTAGTGTGGTGTGCCCTGGATCT
GAATTTTAATTACACTGTAACTAAATGTTCATTCTTGCAACATAGAGGCT
TGTTAACACTGACTGCGAATCCTTATAGTGGTACCAAGAATAATATATTA
ATAAATTACACTGTAAGTAAATGTTCAATTCTCTTAGACCTCTGTACATC
TCGCAACATAGAGGCTTGTTAACACTGATTGCGAATCCTTATAGTGGTAT
CAAGAATAATATATTAATAACTTATACTGTAACTAAATGTTCATTCTCTT
AGACCTCTGTACATCTCGCAACATAGAGGCTTGTTAACACTGACTGCGAA
TCCTTATAGTGGTACCAAAGAATAATATATTAATAATAATCAAATTTTAG
TTTGTAGTCTAAAAAAGGATTATATTATTAGGTTCTAGTTCTTCCATTTT
CCAACAGTTCTGTCGCAAAAAATAATATTCTCGGCATCTGTCAGACCAAA
TGTTTGCTTCCGTGAATATGAATACGTGAGCTTCAACTACTTTTGTATGC
TACAGTATTTCCTGTTAGGACCAACTGACCGTTTTAATGAAAATCGTCGA
ATAGACAAAATTGTAATATTCTTAACTATTGTTTATATTCTACTTGGAGA
AGGAAATTGCTCGTGTTTTACCAATAAGTATTGCAATGTATCAGACCTAC
CTAATTTCTTCTACAAATATATATGCATTCACTCTTTAGGAATCCACTTA
AGATGTTGCTTTTGTCCACCTGAAATAAAAGTACCATTTACTATCAGTTT
TCTTATTTTGTACCCAGAGAGAATTGCCTTCTCGTCCCGTGCTTGGTGCG
TCCCGCCGTCTTCTGCAGTTTGCTGTCCGAGATGCTGTAAAAGCTGTGCA
GCAAACTAGCAGCTCTACTGAGCCATCTTCTAAGCGCCTACGTTCTGTGG
TTTCTACATTATCCACAGACAACCGGCATGGTCAAAAATCAGAAAGAACT
ACAGACAGCCTGCATGATAGGAGACCAGAAAGATCTACAGACAGCGTGCA
TGACAGGAGGTCAGAAAGATCTAAAGATAGCGTGCATGACAGGAGATCAG
AAAGATCTGCAGACGACCCGAATGATAAAAGATTAGAAAGAACTAGGCAA
ATTCTACAAGTGCCTGGAGCTGCTTTAGCTCTTAGAGCTGCTGCAGAGGC
TGCTGCAGATTCTTCTAAAGCAAGATCTACTGGAAGTGTGTTCAGTCGAT
TAGGTCAAGGGAATGCTGTGAATCAACCATCTCGTTCTCGTGAAGAGAGG
AAACATGTTGAGCCAGCTACATCTGTAGATGATCATGATTCTGATCAGCA
TGATAATGACGAAGAGATATCAGGAGACCTGAACATATCCGATGGGGAAG
ATGAAATGAATGTTGATACTACCTCTGATGATGATGTGGACATAGATGAT
GGAATTACTAGATACCAAGGTTCCAATTCACATGCCGGTGCTGCCTCCTC
AGTTGCCGAGAAGAAATATCCATCGACAAGATGTAGCGCTGAACCCGAGT
CCAATACGGCGAGGCATTCAAGTTTGACTTACGAGGGGCAACCTGTTTCT
TCATCTACAATAAGAGCAAGCAAAACTGTGGCTGGTCCAGTTAATCTCAG
TTCTGTGGAACCTCCCAGTTTTGCTACACCAAAAGATGTTCATGTTGTGG
AGAAGCCGGACATCACACCCATGAATCCTACTGTTACCTCTCAGGCTGTT
AATGTCAAAGTAAGTTACCTCATATCTGTAATAACCATTTTTAATGATAA
TTTGCACCATACTGAGCATTTGCAGATGTCTGTTCTGATTATCTTATCTG
CAATCTGTAAGTTATGAAAGAACCATTCCTCAGACCATTTTAATAATCTA
TATTTCTGTGTTCTAGGTTTCAAAAATGTTTATCTGTTGTGATGTTTTTT
GCATTCGAGGTGCAGATGAATTGCCATGTGAAGTTGATTTTTTTCTCTTT
ACGGGTTTCAATCATGACTTTGGTACCTCATTGGTCTATTTCAGCCATAG
CCTAAACATTTTGGTACTTGCCCTATTCATAGTTTTTTTGTTGGATGTTT
CCATGGTAGTGATGACTTGTACTCATTTGCCATTTGGCTTGAATGGAATG
TCAGTAGGGCCGATGGATCATCATGTGAAAAATTGACATTATTTCAACAA
CTTGCCAGTTCTAGCGTCTACTGGATTGAACTGGACTGGTTTAGTTGTTC
TTTACTTACTTTGGTCTGCTTTAATCTCTGTGACCAACGGCATAGGCCTG
TGCTCATACCATACTTAATAATTCCTTTGCAGTCGTCATTCTGGTCTGGT
GTTTTAAACGGAACATCTCGGTACCACGTAGCAGACCATTCCAGTGTTCT
GTTCTGGGCTTATATAGTTAATTTATAGACATATATGTACAGAAATATAA
TACTCCCTCCGTCCCAGAATGTAAGGCGTCTAAGATTAGTCAAAAAGTCG
ACTAATCTTAGATGCCTTACATTTTGGGACAGAGGGAGTAAAAGAAAATA
TACTCCCTCTGACCCATATTAGTTGACTCAAATTTGTCTAGATACGGATG
TATCTAGTACTAAAACTTGACTAGATACATCCGTATCTAGATATCTAGTA
CTAAAACTTGACTAGATACATCCGTTACTAGATGAATCTAAATCAACTAA
TATGGGTCGGAGGGAGTACGAAAAGGGATAGGGGAGTGAATTCCTGAATT
GTGGCCAGGCCTAGCATTGCTTATGTGTGCAGCGAGAGCAGGCTGACCCA
TATGCATCCAAGTTCAAGAAGCCCAGAAAGCACCAGGCCTGATGCTCCAT
GCGACGTGCCTCCTGGTGAAAATAGAACCTCCAGATTGATAGTAGTCCCA
CTACCACCTCGCGTACTTTGGGAACCAGATGTGGTGCTGGTGCCTATGAT
AAGAGCAGAGTGTGATAATAATGCAGCATTGTATTGTGCCTGGTACTGGA
ATGTCTGATACAGGAGATCTGTCTGAGATGGAACATCGGCTGGAATGCCT
GGAATTTAGGCCGTTACAGAATGCAATCTGCTGCGTACCGTTTCGGTCAG
GAAATGGAATGATCTGGTAATTCCGGCTGGAACAGAGCGGCCTCGAATTA
ATAAGTTTGGTTCATACGCCAGCATCAAAGAAATTTGGGATGAAAAGCCA
AACCGATTATTATCAGTGTTGCCTGAATTTAAGACAGGCCCAATGGCCCA
TACTTCCCGTCATTAGCTTTCCTCCTTGAATATTTCTGTTATAAATAAGT
CTTGCATTTTACTTGTTACTTCCTCTATCCCGGTTTAAAGGACACATATT
GGAAATCATGCAATCCCAAAACTCCCCTACCTCCTAGGCACATAAGTATT
TAATTTCAGAGAAAGAGCCAATGAGAAGATTAGTTAGACCCAAATTAGCC
CCAGTCAAAAGAAGCCTAGGGCCCAGAGATTTGGTATATGTGCCCTTTAA
ACCGGGATGGAGGAAGTACTTGAGGTGCTGGTTACTGTACTTCTTTATAT
TCTTTTGGTCATTGGCCTTGTAGAACTTTTTTGTCAGTTGACCTGCCTCG
GAGTCTATACTTTTTTAGAAATTGGGAATTGTGGTAAATGTGCTCTGACT
GTACAAAAATTGCTCAGGAATCAGGTCACAGAGAAGTTCAAAAGGATTCA
CAGCGGTCTGCAACATCTGGTATGTAACAAAATTCAGTGAGTGTAATATT
CAAATCGTAGCACTTAGAATCAATTATCAATAGAGAATGCTTCACATTTG
ACAAAATACCATTATTATTTGATATATTAATAAATTTTGTTTTCCTTGCA
GCTACAAATTCATACAGCACTGCGCATCCCACTGAGGATGCGGATTCAAG
GACCCTCTATGTTAGCAATGTAAGTATCCTTATATTATCACCCTTTCTTT
TTAATGCCCTTAGATTCTCTATTTATCTGCCAATTTTTTTGAAGGTTCAC
TTTGCTGCCACTAAGGACTCGCTATCTCGCCATTTCAACAAGTTTGGCGC
GGTGCTGAAAGTAGTCATTGTTACTAATGCTGCAACAGGGCAGCCAACAG
GGTTAGCTTTTTTCCTTATGCTTATCATTGCCGAGATAATTTTTTTTAAT
GTTTCTAATAGTTTTTGGTCATGTACATCACATGAGATAAAATTGACTGT
TGGCTGTAGAAAAGCAAAGTTCATTTTGGTATACGTAGTTCGTAGCAGCC
ATCAGGTGCTATTATTCTATTTTCTTGGTTGAAAATCAACATGAATAATG
TCTGAAAACATATATGGACGTTTATCTCAGTTTGATTCAGCCCTTGAGAC
TGAATGAGTACCAAGACAAACAGAGATAGTATGAAATATATAGCAAACTA
GAAATGAAAGGAGGATCCCACAGAGAAAAGTACTCCCTCCGATTCATATT
AATTGTCGCTGAAATGGATGTATCTAGACTTGTTTTAGCGCTAGATACAT
CCAATCCAGTGACAATTAATATGGATCGGAGGGAGTAATAGAATGGAGTT
GTAAGTAGATTTGACATCTGAATTAAAGGTCCGCTTGATACCATTTGGTA
GGTGAGCAATAGATATGCCACACGTCCTCATTGACAATAGTAGGGATGCA
AGTTTTGAGCTGTTATATTAGACCGATGAAAGAACCAATGCCCTGTGTAG
CCAGGATGGCCTCAGGGCACCAGACACGCTATTGGGCCACGCCGGACAGA
AACAGCCTTTGGGGCACGTGGCTGGGCGCGTGCCTCTGTCCGGCGCGCCC
CAAAGCGGCTTGGGGGACGGTTAGGGATGCGACTGGAGATGCTCAGTTAG
GTGCATGCAATTTCATGGACTCAAGTGGATACAAGTTCTGAATGGACGCG
AGTAAAAAAGTTTAAGGATCTTAATATTGAACTTTCAAGTTCATGGACCT
AAGCGGAACATATTTCCAAGCTGAAGGAGCTAAAATAAACTAGGAAATTA
ATTCTAAAGTCAGCAATTACGTATCAGTTTTTTCTGAAGACATCAGTGAC
TGATTTTTCATCTGATACAGGTCTGCATATGTAGAATTTTTGCACACGGA
GTCAGCTGAGCGAGCTCTGTCATTGAATGGCACATCATTTATGACACGGA
TTCTCAAGGTATGGTTGCTAGCCTTTTGAAGTATTTTTAGCCTGTCACAT
TCTGTTCTCCTTTGCATTCTTGTTACTGGAGTAGAAATTGACCATAAAGC
ACAATCTTTGTAACTGAGATTCAGTTTTGCTTCCCTTTAACCATATATTT
CTGCACCGCTGTGCCGTGGACCTTGTTGCATGAGAGTAGCATGTTATCAA
CTCTTATTGTGGTAGTTGGCTTTTTTGGTCGCCTTTAAACGCATTAGTGA
TGCTTGTGAGTATTGAGTGCGCTGCATAGGGTGATACTCATGCCGGTTTC
TTGTACTGTAGGTCGTGAGGCGAAGCTCTCATGAAGCTGCTCACTTTTAT
GGTTGGCCTGGCAGTGGTCGGTCATCGCTGTATGCTAGGCACAGTAGGAT
GGCATACCCAAGGGGTGTTCTTCCTGGTAGCTCTTTTAGAGGACGTACTC
CCATGAAAGCGGGTGCCAGAAGTTTTCAGTGGAAGCGTGAGGCATCAGGC
ACTGGTTCAAATGCAGGTGCAAAACCTGACATGAGTGTGTCACTGTCTTC
GGCTGAACAGGTGTTTCCACCAGCCACATAGGGGATCATATTATAGATGA
TCATAGTGAGAACCAGTTGGTGTTTTTCCAGTTGTGCAGCATGTTTGAAT
GAGGACGATAGGGTCAATAAGCTGAAAAGATTGTTGCTCCGAAATGCTGC
TTTGTAAAAAGACTAAACAGGAAAAAAAACAAAAAAAAAAGGAAAAAGAA
ATCGGAAAAGGGGAATGGGATCTGGAGCTCCATTCTGGTAAACTGCGATA
CTGATACTAGGAGATGGTCATGTTCTTATCAGGCGGCCGCAACAAGCAGT
TTTCATCAGCCGTTTGAAAGGGGCTTACACACATTTGAAATAAGTGCAGC
TGATGCTTGCTTCAGTGATGAGGATTGGTTGTTGATAAAAAAAAAGGACC
AGCTGTTGGACATGATATTCTGGCGCTTAGTATGCGCTCTGTCGATGTAA
GCCCCAACTGTATAGCAACCAATTTATTTGTACTCTTATCTCGGAAACCC
CTTCCCAAGCAAAAAAAAAGTAAAAAAAATGAAGAAAAGTACATCTCTGT
GTCATCTTTTATTGAAGCAACCATTTTTTATTTCTTATGTATTTATTTAT
TAACTGGACATTCATTCAATTTATGTGGTGGACATTGTTACTTTACCTGG
AACACCTTGGTACCCATAAATAAATTGAGC

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.