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GrainGenes Sequence Report: AA046311

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Sequence
AA046311
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA046311
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
ACAATAGTAGCTCGTCTGTATGCGGCCACTTCTGCCAGCCACAAGCCTGC
GCCTCCCCACGTTCTCCCGTCACGTTCTCCACGACTCCTGTCCTGCCACC
TGCCAGCCTTTAGCTCACCGTCGGGGCCGCCTCGCTTCGCAGCCCCCGTA
CCACCTCCGGCGTGCGCCCCAGCCCAACGGCCTGGAGCAGGTAAACCGTC
CTCCTCCTTCTGGATCTGAAACTTGCATCTCGCTGATTGAGTGATGGATG
CGCTGCACTTCGCCCCCGAGTTATACATCTCGGAACTCTAGCCCAAAATG
CCTGCCTTTTTTCCTTCACTACTCCGCGCAACCCACTATCGGTGATTTTT
GCCCTCTCTGCCTTCTTTTCTTCCATTATTAAGGTTTTGAAGGATCGGGG
GAGTTTTGTTTGTCCAGGGCAAACTACTCTCCACATTCCCCTTGCGTTCA
TCGGAAAATGACAATCCCCTTTTCATTTGGAGCACCGTGATTTCCGTTGT
GGAGCTAGATTAGCTTCGGTTCTCCCTGTTATTCCTTTTCGAGGTTTCTG
CGGTGTTTAGGGGATGTGTTGAAGAAAACACGTCTCAAAAGACTATGCTG
CTCCAGCGAGGTTTCTGTGTGGATCTGACTTTTTGTGTCCCTAGCTTGTA
GATACATGAAAGATGCTTGCCTTGTGCTGTAGCATTAGCGTTTCATCGAT
GGATTGAAAACTTCTACGCTGGTCACTATATGCAATTTCTCTTCATTTCC
TTTTCTTACATTTTGTTATTATTGTTTGGATTGCAGGAATTGGTCCTTTG
GTTTATTTTAGTCCGTTAGAAAATATCCCACCAAATATGGTGGCCTCTCT
AGACAACGTTAGAGGCTTGACTTTAGCTATGTCATCCAGTGCATTTATCG
GTTCAAGCTTTGTAATCAAGAAAATTGGGCTGAAGAAGGCTGGGGATTCT
GGGGTAAGAGCAGGTTGTGCCTCTTCTGACAACTACTTAACCAGACTAAC
CCTTAGTTGCATAGCAACTGAATTTTTAAATGCTTCTGAGATTTGTGGAA
TATTAATGATCTATGGAATATATGTATGTAAATTGCCATTTATATAGTAT
GACAACTTGGTAATTTTGATTCCTTATGCTGATGCACTGTAGGTTCTGGA
GGTCATTCATACTTATACGAGCCCTTATGGTGGCTGGGAATGATCACTAG
TAAGTGTGGATTGGGATAGTGCACTTGAGACATTTAATGTTGCCAATAAT
TCAAGTAGCTATACTACCAACTGTAGCCCACTACAGTTTTGCTCAACTCT
TTTATGTGTGCTTATGTAGATTTTTTTAAGCAACCGGCAGGAGGGCTGCC
TTTTCATTAAGAAAAATAGATATCTACAAACACCTGTGCATGTTTTCGGG
TGAAACGTCCCCCCCCCCCCCCCCCCCCCCCCCCCACACACACACACAAC
TCCACCACAGAAGCATAGGGCAGACATGCCAAAATCTTGGACTGCTTTTT
AACTGGTTGTTTATAACTGAAGTCACACAACTTCTGTAAGTCAACGTTTG
AATACTGGATATTTCTGTAATTGTTTGTTTACCTTAATTATAAATATTTG
GAAGAATGACCTTTCTGCATGTTGGTTAATCAAAGTATCATGATATCATC
GTATAAATGGTGTGAGTAGCATCAAAGTTGTATAGCCCCACTCTGATAAA
GGAGCCCTTGGACAACTCCATATTATTAGGGTTATACGCCTTTCTTGTGT
GAAATAGTGTTATACACCTTCAGTTAAAGTAATGGTAGATTCAGGAGTAG
CTATTCTCACATTTACAAAATCTACATGAACTCCCAATACCACAGAGGTA
CTAGTAGAACTTGCTCAAACATTAGGACTTCTATACTGCTCTGATGGAGA
ACACACTAGGCAAGTTAAATTGGTTTGACTGGTAGGAATAACAACATTTT
ACAAAGGCTCTCCTCCTTATTTCTAAAAAGGTTTATCTGATTGAAACGAC
TGTTAATCCATAAGTCTTGCAAGTCCAGTTGACTAGATCACTGCGGTTAT
TTATTGTTCTCTGTTTGCCTTCATTAGTTCCATTTTCAACTTTTAAAGTG
TAGAAAAACAACCTCACTGATAAGTGAAGTTTCATGTGCAACAGCATTCA
TGACGATGAAATGGAAGGTGAAACACTGTTGATGTTCATCTTTCTTTATC
TTGCAGTGATTCTGGGCGAGATAGCAAACTTTGCAGCATACGCATTTGCC
CCTGCCATACTTGTTACTCCTCTAGGAGCTCTGAGCATTATATTTAGGTA
GCAGCTACTATTCGCTTGAATTTAGCTACGTATACTATATGTTCATGTTT
AATCTTTAATTTATCTACGTATACTATACGTTCATGTTTAATATTTTGCT
CATGCAGTGCAGTGCTTGCACACTTCATCCTGAAAGAGAGATTGCATATG
TTTGGTATTGTTGGTTGCATCTTGTGTGTTGTTGGTTCTGTTGGTATTGT
TTTACACGCCCCCAAGGAGAGGGATATTGATTCAATGGAGGAAATATGGC
ATCTTGCAACTCAGCCAGGTAGCTACTTGAGGACCTGTCCTGTATATAGA
GAACACATAGTACTCCATGCTTTACTTTTTTCTGTAAGAAAACTGTAAGG
GAGACTCCTGTCTTAGAAATAGGAACATGAATTCTCCCCAACCATTCATA
TTTTTTCAAGATTTCATGATCTAACCATCGGTTCGGATCCCATGGAAAGT
TGCCAAACTACAGAAGTATAAAAATTTTCAACTGTTGTTTCAAACGTATG
AAAATCTAAGTTTTTTTTAGTTTTCAAATTTCCTCCAGTATTCCAGTTAA
GTTCCTATTTGTTCTGTTGCGTCAAGCTTCGGAAGGAATGTTGATCACAA
CGGTTCAATATGTCACTTTTGCTTCGGTCCTCCCCCCCTTTCTTTCAAAC
TTTGATAAACAAAAACTCGATACCGATTGTTTAGAGGACCGTACGAACCC
ACCCGAAGTCCGTATGGTCCTCTTAGACATATACTCACCGTAACAGCAAC
AAAATAAATTTAAAATATGACATGCAAAGATGTAGATCGTGATAATGAGA
TATTGAGAGGTGGGATCAGCTGACTGGAACGTGGATTATACCCAGTTCGA
CCGAGTACACATATACGGAGATATACGTGGCCTTGATATGGGTTTCGATG
GGTCAAAAAAATAAAACGGCCCATACAGCTTAAGTTTAAGGGGGGAGGGG
GGGGGGGGGGGGCGAAGATAACTTGGAAGTTCATAAACTTTTCTTCAATG
CAACAATACATTTATGCTATTTTTTGCTGTATTCCCTTTGATTTGGGTAG
TATCTGCAGGTTTCATCGTTTATTCATGTGTGGCTGTTGTTGGCGTTCTT
TTTTTGATTTTCTGGGCTGTCAAACGCTCTGGTCACAGGAAGATGCTTGT
CTATATTGGAATCTGTTCACTAATGGGATCCCTCACGGTACATTAGTAGT
GTAGTACCTTTGGATTAACTAATTCAATGTGTCAATTTAGTGACTGTTTA
TTGACATGTTCTTTACCGGACAGGTTATCAGTGTAAAAGCAGTTGCCATT
GCCTTGAAGCTGTCATTTAGTGAATCAAACCAATTCATCTACGTCCAGAC
GTGGTTCTTCATATTTGTTGTCATTATTTGTTGTTTGGTGCAGTTGAACT
ATCTAAACAAGGTACTTATGTCTCAGGCCTTTATTTTGTATGAATTCCAT
TTTTTTGAAATTGGCTATACACTATACATAACTTCTATATTCAATCCAAT
GGTATAATCCAGGGCTTAGTGGCATCTGATATATGAACTTGCATGGTTGT
TGTGACAATGTGTAATAGGCCCGATCTAGATCTAGATCTTAGCACGAGGG
AGGAGGGAGTTGGTAGGGGAACTTGGGAAGGAAGTTTACATTCGCCACCC
ACCAGGTGCGTCCGGTCAAGTGTCTCGTCAATCGAAAACTTACAAACGCT
GGGGACGGTGGTATTTATAGCAAGGCACCAATGTCTACAGCTCACACACG
CTGCACCCCACCAACCACTCTGGTTGGGCCCTTTGTCCGCCATCGGATGA
TGTTTGGATTCGGAGGTGGTGATGACCCCGGAGTGACTCTTGGCTCCTTG
GCTCCTGAGTGGAGCTGGCTCCCGAGTGGCGCCGGTGACCTGTGACAGTA
ATGTGGGAATTCACGTAGTTTCTGTGAGAGTAATCCTTGCTTAGGAGTTA
AGCTACTACTCGGATAGGTTCTGGTAGTACAGTATTGGTAGTAGTACAGT
ATTGGTAGGTTCTAGAAGCAGCTTTAGGTGTGTAGGTATGTAAATCTTAG
GCAGTAAGCTAGATAGCAGTAGAAAGCTCTAGAACTCTCAGGAGAAAACC
GACCTGCCCTTGTGATCCTATATATATGCCACAATGTAATACATGCCGCA
AGAAGCTTTTGGCAGCCACAAACAAACCACCTTCCTACACACTACATGTG
AACTAACGAGACTAATAGTTAGTATCAGAGCCAGGCTGTTGGTGAAGATA
GGATCATGAGAGATGTCAGCTCCAAATCAGGGTGTTGCCCGCAATCCGTC
TGCCTAGCCGCGGCGCCGTTCCCCTTAACCGCCACCGAGACGACCGCACC
ACTGCGATGCAGGAAGGCGCGAGGTCGTGGTTGAGCGTGTTGTGAAGGAC
GTCGGCGGCGGCAGTTACCCATTGCTGACGCGGACGAACTACACCGAATG
GAGCCTCCTCATGAAGGTGAAGTTGCAGGCTCGGGGTATTTGGGATGCGA
TTGAGCTTGGCGCCGACAACTTTCAGGAAGATCGAATGGCGCTGGAGGCC
ATCTTGCAAGCGGTGCCACCAGAAATGGTGGCTGGACTGGCTGTCAAGAG
GACAGCGAAGGAGGCGATTCGAGCCATGCGCGTCGGTTCATACCGCGTGT
GGAAGGGCAAGGTGCAGCAGCTGAAGAAGGAATTTGAGATGATCTCGTTC
CGCGGCGGTGAGTCCGTTGACGAGTTCGCATTGCGCCTTACCAACCTCGT
CACAAGCCTCGCCATGCTCGGATCACCCATCGACGAAACTCAAGTCGTCG
AGAAGTTCTTGCGGGTTGTGCCGTCTAGACTCTCGCAGATAGCCCTTGCA
ATTGAGACCCTCCTTGACACTTCTGAGATGTCGTTGGAGGAGGTCACCGG
TCGGCTGAAGGCAGCGGAGGACCGTCTCGAGTCGCCTGAGCCGTCACGTG
AGCAGGAGCGACCGTCTCGAGTCGCCTGAGCCGTCACGTGAGCAGGGAAA
GCTCCTGCTCACCGAGGAGCAGTGGCGAGAGGAGATGAAGGGGCGCCAAG
CAGGCAGCTCCTCCATGCCTGCGAATGGCAGCAGGCAGCAACGACGACGA
CCGCCGCGTAAGAAGGGTGGAGAAGGCGATGACGATCGTGCAGCAGCTAA
GGACGGACGACGTGATGACACATGTCGCAACTGTGGCTGTCATGGCCATT
GGGCCAAGGATTGCAAGCAGCCTAGGAGAAACAGGACATACTTGGCCCAA
GCAGAGGAAGATGATGAGGAGCCTGCACTCCTTATGGCATAGGTCTGCAC
CACTCCTGCCCCAGCCGTGGTGGTCACTCCTCCCCCAGCCATGATAGTGC
AGAAAAGACACTCCAGCTGCTGCCATGGTGATGCAGCAAAAGGTTGCTCT
AGCCCCAGCCATAGTGGTGAAGGACAACACTGCTATAGCTCCAGAGCATG
CCCCTCTTCACATCGACGAGCCGAAGGCAAAAGCCTTCCTCGGGACGAGC
AACGATGATGAAGCGAATCGAGGGCTGGTACCTTGACACCGGTGCCACAA
ATCACATAACGGGCCATGGCGACGCCTTTGCTGGAATTGATAGAACGGTC
ACCGGCACCGTCAAATTTGGTGATGGCTCCGTCGTTGAAATCAAGGGCAT
GGGCACCATCATCTTTGCTGGCAAAAATGGTGAACACAAGGCTCTCACCG
AAGTCTACTACATCCCACGTCTGAAGAACTCGATCGTCAGCGTTGGTCAA
CACGACGAGAGAGGCGCATGTGTGCTGATCAGGAGATGTGTGCTTTGCAT
ATGGGATCAACAAGGTCGGCTCCTTGTCCGAGTCGTGCGCGACCGAAATC
ATCTCTACCGCCTCCATCTTGAGTTGTCTCTCTGCCCGCTGCGATGATAT
AGCTTGGCGCTGGCATGAGCGATTTGGGCATCTCAACTTCGACACTTTGG
AGAAGATGGGACGCCTCGCTATGGCACGTGGGCTGCCACGGCTGGAGCAT
GTGGAGCAGTTCCGTGACATGTGCGTCATCACCAAGCATCGTCGCCGCAT
TCCCTCAACAGGCAAGTTATCGCGCACATGAGCTACTTGAGCTTGTCCAC
GGTGACATTTGCGGTCCCATTTCACTGGCGACACCTGGAAGCCGGCGCTA
CTTCTTGCTGTTGGTGGATGATGCCACTCGCTACATGTGGGTGGTGCTCC
TGGTAGCCAAGAACAACGCACCGGATGCCATCAAGAGAGTCCAGGTAGCA
GCAGAAGCTCAAAGCGGACGCAAAATGCGCGTGTTCCGCACGGACAACAA
CGGCGAGTTCACCTCAACGGAGTTTGCCGCCTACTGGGCTGATGAAGGAA
TCGAGCGCCACTTCTCCGAGCCATACGCCCCGCAGCAGAATGGCGTCGTT
GAGAGGCGGAACCAAACGTTGGTGGCAATGGCGCATGCTCTGCTGAAACA
AAGGAGTGTGCCGACTGAATTTTGGGGGGAGGCAGTTAGCACTGCTGTCT
TCTTGCCGAACCGAGCTTCAACCAAATCTCTCACTAGGAAGACGCCTTAT
GAGGCGTGGCATGGCCGCAAGCCGGCTGTCCACTACCTGCACCTTTGGGT
GCTTAGCACATGTCAAGGAACATGGGAACCTACACAAGCTCGACTACCGC
AGCTCTCCCACTGTTTTCATTGGCTACGAGGAAGGAGTAAAGGGGTACAG
GCTGCTGGACCCAACGACAAGACGTGTTCGTGTCACCCGTGACGTTATCT
TCGATGAAGAACGTGGCTGGGATTGGGCACCGGGCGATAGCGAATACTCT
AGCAGCAACTTTGACGTAGAGTACATCAGCCGTCGTGCCACGACGGCGCC
TAGCCACGCGCATAGTTCAGGAGAGGACAGATCTGCATCGTCGAGACATG
GGGCTCAAGATATGTCAGCCAGCACACCACCATCATCTCAATCTACACCA
CTCTGGCATTCGTCACGCCACTAGCGGATGACGATGATCGACTCAACGCT
GCACATGGCGACACACCAGTCCGGTATCGCAAGGTTGAAAATCTTATTGG
AGAAGAACCAGTCCCGGGGCTCGCACCGCGCAACCTCGACTCCGAGCTAC
ATTTGGCCAGCACGGGGGAGCTGTGCTCATTTGCAGAGGCTAAGCAGGAC
AAGGCATGACATGGGGGCTCGTCGATCTGCCACACGGGCATCAAGCAATA
GGCCTGAAATGGGTCTATAAGTTGAAGAAAAACGAAGCGGCGAAGTAATC
AAACACAAAGCGTGGTTGGTTGCCCACGGCTTTGTCCAGCAAACTGGCGT
AGATTTTGATGAAGTCTTTGCTCCGGTTGCTCGCATGGAATCAATCAGGT
TGCTTCTTGCCCTTGCTGCCCAGGAGGGGTGGTCTGTCCACCACATGGAC
GTAAAATCAGCCTTTCTCAATGGGGAACTAAAGGAGAAGGTCTATGTGAA
GCAACCACCAGGTTTTGTCATCAAGGGAGAAGAAGGAAAGGTTCTGCGGC
TGCGCAAGGCCCTGTATGGCCTGCAGCAGGCGCCACGAGCATGGAACGCG
AAGCTCTACTGCACGCTCAAAGAAATGGTCTTCAAGCAGAGAGAGAGAGA
GCACGAGCACGCAATCTACTGACGCATCACCGGCAAGGAAATCTTGCTCA
TTGGAGTATATGTGGACGATCTGATCATCACAGGTTCGTCCAAGGGAGCA
ATTGAGAGATTCAAGGATGAGATGAAGACAAAATTCCAGATGAGTGACCT
GGGATTGTTGTCATTCTATCTCGGAATTGAAGTCCAGTAGCACGGCGATG
GCATGAGCCTATGTCAAGCACACTGCATCATGCATTCTTCAGCTGGGAGG
AATGGAAGGATGTAATCCAGCACACACCCCAATGGAGGAGCGGCTCAAGC
TGAGCCGTGAAAGCACATCAAAAGAGGTGGACGCCACGAAGTAGCGACAG
ATCGTTGGCAGCCTCCGCTACCTCGTCCACACCAGGCCAGACCTGGCATT
TGCTGTTGGCTTCGTCAGTCGATTCATGGAACGACCCACGGAGGAGCACA
TGATGGCCGTGAAGAGAATTCTTCGCTATGTCGCTAGCATGACCCACTAT
GGTCTTCACTACCGCCGGAAGACAAAGGAGGCACATCTAATTGGTTACAC
TGACAGTGACCTAGCCAGCGACATTGACACAAGGAAGAGCACAAGCGGCA
CTCTATTCTTCCTCGGCGATTGCTTGGTGAGTTGGCAATCTCTCAAGCAG
AGGGTAGTTGCTCAGTCTTCCTGTGAGGTAGAGTATGTCGCAGCCACAAC
TACAGCAACTCAAGGAATTTGGCTGGCTCGACTGCTTGGAGAACTTCCTA
GAAGAAAAGCCGAGACAGTTGAGCTAATGGTGGACAACAAATCTGCCCTG
GCATTAGCCAAAAATCCAGTCTTCCATGAGCGTAGCAAACATATCGATAT
TCGGTATCACTTCATCAGAGGCTGCTTGGAAGATGGAAGCATCGGCGCCA
GCTTTATCAATACTTCAGATCAGCTTGCTGACATTTTGACAAAATCACTT
GGGCGAGTGAAGTTTCAGGAGCTGCGTGCTAGAATTGGAATGGTCCAAAT
CAAGTCAAGCATGAAGAGCAAGGATTAGGGGGAGAATTGTGAGAGTAATC
ATTGCTTAGGAATTAAGCTACTACTAGTAGGTTCTAGGACTAGTACTCTG
GTAGGTTCTAGGACTAGTACTCTGGTAGGTTCTAGGACTAGTACTCTGAT
AGGTTCTGGTAGTACAGTATTGGTAGTAGTACTGGGTGGTTTAGAAGCAG
CTTTAGGTGTTTAAATCTTAGGCAGTAAGCTAGATAGCAGTAGAAAGCTC
TAGAACTCTCAGGAGCAAACCGGCCTGCCCTTGTACTCCTACATATATAT
GCCACAATGTAATACAGGCTGCAAGCAGCTTTTGGCAGCCACAAACAAAC
CACCTTCCTACACACTACCTGTGAACTAACGAGACTAACAGTTTCTTCCA
TAGAGATGCTTGGCCGGAGAGACTACTTGGTCTATTCTACGTCAATTTTT
TGTTCCTGATCAATTTATCCCACTTCATGGCAACTCTTCTGAGAAAAACT
GCAACTATGTCTGATTACATAATCACTCTAAAACTCTGACATGGTCTAGC
CTCAACTGGCCGAGCACATAATCACTCTGAAGCATCTGACATGATCTAAG
CCTTGATTTCGTAAACATGTCTGACGTGTTTAGCTGATAATCTGACCAAA
GCAGGGTTCAGTTTAGCATATCCTGGTTAGCATGTTTTCTTTTAAACAGA
AGATTTGCGGATGTTTGGTTTACTTTAGGATTTCCAGATGTAAGTACACT
TGTAAGACACCTGGTAATAAATTTATCCTTCTCTAGATCCTGACTAATTA
GCACAAATTATTGTTTTGAAAGAAATAAAACAGATAAAATTATGAACTGT
TCATCCAAATGGTGAGTATTAAAAAAAATATTTACTGTTAACTACACGAC
CTTAAGGTCCTTAAAGGCTACAGAGATGAATCTGAAATCTGTTCTAATAG
TCTCTATTATGGTTATTTTCACCTCTTGTTGAACTTATGTAGGCTCTGGA
TTCTTTCAATACGGCCGTGGTCTCTCCGGTATACTATGTGATGTTCACCA
TTCTTACTATTCTCGCTAACATGATTATGTACAAGGTGATATGTCTGTCT
GTTAATTTCCAAATATGTTCACATAATGTGAATCATAGTTTACTCATCTC
CCAGAGGAATTGCAGTGCATAGTAACGATGAATTGACACATTATCAATTA
TTAGATGAAACCATCTATAAGTTTTACGTTACAAAAGTTTGCTTGCCAAG
GGTATAGGATGCCTGGTCTACCTTATTTTTATCTCGTTTTGTCTTGTATG
AATTCTGCAAAACAAGTTTAAAATGTTTTCCATGTTGCAGAAGAAATTAT
ATCTGCACTATATAAGATTTAAGGTTAGAACTTTTAGTTCATATTGAGGT
AATTTGGGTAGAATAAGGTCTGAAGACCTAGGATAGTGCAGATATAATTA
TTTCTTCCGTAGCAAGGCCATCCTGTACCTGCTGCAAGGCCATCCTGTCA
TGGACTGAAAACTGCTAACCAAAAGTATCTCTTCCGTAGCTAGATATTAT
CCTTGCTCTGTTTTGTTTATTATAATCAAGTCTCTGCCTTGCACATTTAC
TCCAACCATAGTGTGCTATTCCATGTCCAACAACATTTAAATAGAGAAAA
TCTGTGACGTTTTACATGTTCATGTAGGAGCAATCTTGTAAGCTGAAGTG
ATTGCCTCTTTTCACTGAAGAGTTGTGTAACATAAACAATATCTGGCAAT
TATAGAATTGATCATCTGTCTAGTATGTACAATAATTTCATCTGACGTTT
GGTCATGGTTATTCCCATTCCAGGACTGGGTCACGCAGAGCGCAACACAG
ATAGCCACTCAACTTTGCGGGTTTGTGACCATTGTCGCTGGAACTTTTCT
ACTACACAAGACTAACACCAGTAACACAGATAGCCATGTGAGGAGTGCAG
CAACAACTCCACCACCGCTGACACCACCACCACCACCACCACCACCTGAT
CAGATT

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.