Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA013911

[Submit comment/correction]

Sequence	AA013911
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA013911
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	CTATGACTAATATGACATATATATCATTCTCGTCAACGAGGAAGCACCTA TACGACATATCCTTCATACGCCGCGCCGGCCATCGTCGAGCTAGCTAGCT CACCGGATCCGCTCATCCTCCGGCGTTCGGCAGGTCTTCGATCATCAATC TCCTGCACGTACGGCTGCTTAGCACAAAGTGTACGCAAACTCTTGCTTAC TTTTACTCACCAGTTAAGAATCTTCTTGTTCTAGATCTGTTTTCTTGATG TGTATATACACTTTCTTGCTAATTTAGATGCAATATACGTCAATTTGTTC TTATTTTTCCTACGTCGATGACAGTTCCTTTTCTGACCCTTTAAGTATAC ACAGTTTTCATGTATGTTCCTCTTGGCTTCTCTGTTTAGGCGTCTCGCCA AATCTCAGCTTCTATGAGGAGGTTCTTCAACCCTTCTTGAAAAAGGTGAG CTCACTGCTCACCCCCTAGGAGTATACAACCAAAAGAGCACATAGCTTGG CTATCTGTCGACAAAACCAGAGAAGATTTCGTCCATGTCTATTTACATGC TTGAGCTCTTCTCAGTCCGAAAACTATATCTTTCACCTCAATTGATTTGT AATCTCAATGTTTTTCCTCAATAAATAGAGAAAATCAAAGCACTGAACTG TACATAGAAGGAGTCATGTTTTGTCCCACTTTGCCCCATTATACCAATCA CCACCGGTTTATATACGTTCAACGCTGACCATAGTATTAGCAAGCTAAGT CGGGAATCAACAAGCAACAACACCTCCCGTTCAAAAAAAAAGCAACAACA CCGTGGAGGTGTGAGCAAATTAGATTGGAGGGATTGTGAGATGTATGCTG CACCACGGCAGCCACTCTGCATGGTTGATTAAATAAACGGAATTGTAGGT CTGTGCATAATGAAATTAAATGGACTATTTGGGGCCAATGAGAGAGTGAA AGATCTAAGAGCATCTCTAACCCATCCCCAAAATTTAGAGTAAAAGGCTC CCTATCCTTTAGAGGAGCAAATATAGTCCTCCAAATTTTGTGACGCGGAT CCGATCCCCAATAATTTGGAGGAGTAAAAATACTTTTGAACATAATTTGC AAAATTGAGCACATGGATACATGAAAACATACCACATAAACATTCCTAAT TCATAAATATTGATAAATTAGTCATACAAAGTGATAGCATCATCCTGATT TTCTAAAATCACACGTAAACACCATTATTTAGCGTATTGGAGCGCACTAC TAGCAAAGTGATAGCATCATCCTAATTCATACTACCATGTTCCACCTATT CATAATCATAGATTCTAGTCGGCCGCATTGGAGCGCTTTACTAGCAAGGT CCACCTATTCATAATCGATACTAATGACCTAGCATCTCCGCTAGTGATTA AAATTGGCATGTATTTCTTTCCAAAATTGTTGAAACGGTTGGTTGGCTCC AACAATTGTTTGATGATGCCACATGAAATACAAATCATTGTCCTCATCCT CCGACCATGTAGTTTTTTTTCTTCTTCACCTTGCTACGAAGAATCATCAT TTTTAAATTAGGAAATTCACAAACTTCAAAACAAAAATGGGGATATACCG AACTCATCTCGTTCCGTCGGCGCCGGGATTTTTTTGACATATACCAAAAA ACTGTAATGAGGTAACCATGGGGGAGTCATGGTCAATGCTACTTCCCCTA CCTCTGCCACCGTGAGCCACGACATTGTATGTTTGGTATAGAATCGCTTT CTTACATAACAAAAAGTTCATTAGAACTTTGAATAATAAAGCAATGTAAG GTGACATATTTGATAGCATGAAACAATTTGAGTAGCATCAGGAAACAAGT GGTGGGTTCAGGAATTCAGCATCATTCGGATGTGCCTACACACATGTCCA CACACAAAAAAAACAATTTCAGCAATAAGTAGCAAATTTTCGTACATCTC AACAAATTCAACCATATAACATATAGCACATCTTTCAACCATATATAACC AGATTTTGGAAAATTTTATCTGTATATAACAAATGTTAGCACATTTCAGC AATAAATTACATATTCTAAGACATTTCAATCAGATTTCAGCTGGATGTAG GTAAATAACTGGATGTGGCCCGATTAATGTTGCTTTTCTAGCACTATTGT ATTGTTCTCATCATCCAAAATTCCCATGTAATCTTCTTTATTGAACATTT ATTATACTTATTCCACCACTTGTGAAGATAACTATGCACTTGGATGCTAA TCGCTTAAAACTAACAAAATGAGTGAACGACGTTGCAACTTGGGTAAGAT GGATCTCTTTGAAACCATTATCAATCGTGACACATTTTGTTGTTATGTTG TACATCGGATCATTAAATGATGACATAAAAGACGTCCAATTTCATCTTCT GGTCTTATTTGCTTTAGCACCAACATCAGGAACATCATGTGTATTATTGT CGGTCGTCTGCATCAAGCATTTAATGATCCGAAATAAGATGTAAACAAAT AAATGACTATTTCATCACCAAAATGACATCCAGTAATAAATAACGGATTT CATGACCAAATAAGATGTTTTTGCATCGAATGACATATTTCAACAATGAG AAATAAATTCACCAATGCATGTTTGGGGGACTTTGCGGATATGACTTTGA GGTTGGAATATCCCTGATGGCAAATAAAACCTACCAAATAATTGAAAGAA GGTATGAGGTGGGAATATCTAATGCCATGCACCCTACAGATTACCAAACA CGCCCATCACTAACGGATTTTAGGTTATTTCTGATAAGCAACCCGGTAAA GAGGCTTGATGGAGAACCTGTCACCAAGAAGTTCTTTGTTGAGTCTATTC TATCGGGCACTCAGCGAAGCTTTGTTGAGTGTCAAATATCGGTGCTCGGC AAACTAAAGTGAACAGACGGACCAGAGATGGTGATGAAAGTGACACATGG CACAAGGGTTTGCTGAGTTTCAGTGTCTAGTCGCTTGGAAATGGCCTGGT AGATTGTCCCAATGGTGGTTTTGTCGAGAGTCATATACAGGACACTCAAC AGATGGATGGCATGTGGGTCCACATACCGAGCAGTCAGAGGGTATGCATA CGTATTGCGCTAGGATTATTGGCGTGTAGATATAGCAACAGTCAAACTTC GTTTCTTGATTTTATCTGCAACAGGTAGCAACAAAGGCTGAAAGATGTAT TCTAGTCAGTAACTTGTTCAAGAAAATGAGGATAGAGAGCGTAAAAGAAC TAATTACTCAATGTGGGCTGAACTATTCTAGTATCACATTAGAAGTTCTT TACTCGAGAAAACACCTATGCAATTGCATGTATCTCTTGTGTCTGCTGTT TCCCCATGAAAAACCTTAAACTTGCTTCTAAGCCAATGGCCCCATAATTT CACTATTGCCACCAGAAGAGCTCACTGTTAAGAGCACAAGCAAACTAGCG CATATATAGCTTAGCAAAATCTACTATCGATACCAAGGAAAATTCCCCGC AAAGAAAAAATACCAAGGAAAATTGCCCATGTCTACTTACTTGCATGAGA TACGTTGACAACTTTATCTTATGGATGAGGTCATGAGCTATTCTGTATTT CGTTGTTTTCACAAGCCAGCATGATGCCTTTAACTTTGGGCTTCGTTCTC CTTAGTTTGTCTACACATTCCGGTGCTATATTAAATCTCGGGTTCCTCTC AACTTCTCGGAGTTACTCTTCACCCATCGGTTCTATGCAAAGATGTGTTT GAAACCCGTAACCTCATGCTACGCACGTCGACTCACTACCACTAGACCAA TTGCACTTTTTCAGTACTTGGGTTGCACCTTTGGAATTTTGCTCAATCAC AATTTTTTAATGCAGACACGTTCTTACTTCTTAGCGATGGTGAAAAAAAA ATTCGTGTAACTAAAAATTCTCTAGTACTAGAATTGCGACTTTTAGAAAT CAACCGTGATTTTAGGAATTCGAGTGCAACTGCAATATAGCGATCCCTAT TTATAATTACTTTTTGTGAGGCAGCTAGGAGAGGGAAATTTTTAGTAGCC GGAATCACGGGAGGCTGCTTGTTGGCGAAAAAGAAGTCATGTGATTTCAA TTTCTAGACGCTCCCAGGGGTTTTCAACCCTTTGTCCAAATTACAATATT TTAAGTTTTCTCTTGAAAATACACCTATATATGCCATTGCACGAATTGTC ACCACGGAAGTCTATTTTCTAAGGCTAAAATATATGGAGCATCATTATTT TTGTACCTAAATTGACCATGTCTGTTTTCTAATAAATTATGCGTACATGA TGTCTCTCTTTACTAATGCATATGTACCGTGTTATCAGAGATAAGAAACA TCCAAGCTAGTCAATCCAAGAAGGAGATATACGAAGATACAATGGCGATT ATGTTACAACAGGAAACTACTACAACTAGGGAGTTTACACTAGAATTCTT AGAACAAATTACAAATGGTTTTTCTGAAGAGCACATAATTGGTCGTGGTG GGTATGGAGTAGTGTACAAGGTAAAAATATATGATTATTACTTTTATCTC GTAATTCAAATGATAATATGCTACATAATTTCAAGATGAAGACTAATTTG TAACAGGGAGTGTTGGAAGATGGGGAGGAGATTGCCCTTAAAAAGCTACA TTTCATTCCAGGGCTTGATGACAAGCAGTTTACGAATGAATATAATAACC TTATGAGGGCCCAGCATCCTAATATTACTCGGTTGGTTGGTTACTGCTAT CATCTAGGACATCGCCTGATGAAGCATGAAGGTGACTATGTTTTTGCCCG TGTGGAAGAAAGAATTCTCTGCTTTGAATACTTGCAGGGAGGAAGCCTTG ACAAGCATATTTCTGGTATGATGTTTCCCTACTTCGCACATATGTTGCAT GTAAAAAAAAATTATTCAGAAGAGTTACACCTCATGCTTACTTCTACAGA TGAATCATGTGGATTGGATTGGCACACACGTTTCAAAATTATTAAGGGAG TCTGTGAGGGCCTAAGTTATCTTCATAATGGATCCCAAAATCCTATTTAC CACCTAGACTTGAAGCCTGAGAATATACTGATGGACAAGAACATGGTCCC AAAAATTGGTGATTTTGGCTTGTCAAGGTTCTTCCATTCAGAAAAAACAC ACATCACGACCAAAATTATTGGAACACAGTAAGTTGATACCATGTGATAA ATAATGAACTTATTTTTCTATAATTATAGAAATAATTGTACTAGATGCAT ACTATGCAGTGGATACATGCCACCAGAATACATCGACCGACAAGAAATCA CCCCGAAGTATGATATATTCAGTTTGGGTGTTACAATCATACGAATAATA GCAGGGCATGGGGGATACTCCAAATGTGCTGAGCTGTCTTCAGAAGAATT TCTTGAGCATGTATGGAAGATATATTTTATCATGAAGAAAAGTCCGTTTT TTACAATATAATTACCATGTTGTGCCTTACTTTCCGTTGCCTTTGCTCAT TCATTCCATCTTTAAGGTACATGAAAACTGGAGAAAAAGGCTACAAGCAA AAATGTCGTCGCATACATCAGAGCAAGTTAAGACATGCATAAAAATAGCT TTAATGTCTGTGAAGATCGATCGTGCGGAAAGGCCTACGATAGCTGAGAT TGTCGAAGTACTAAAGAAAGTTGATATTTCTGAAAGTCTACACGCAGGAC AGGTACATATATTTACATTGGTTATAGGCCAGGCTTTATCGTGGCATAGC CAAACCACATCCCCTGCCAAATTAACCAATAACATCACAGTCATCATAAA CGCCTACTCTCTTTTGATCTTTATTTTGGTCTTCTCTACCTACTCCTTTA AGGTTCCACCACTATAACTAGATGCTCGTATCTTTGATTGACTTTAAGGT CTTGCAAATCCAGATTTTTTATTGACTTAATCGAATCAGAAATAAGGCTA GGTGAGACCCCCAACTTTGCAGCTCTAGCTGCAACAATGTCATTCAGAAT TGAAGAAATTGAATACTTTGAAACTAAATCGGTACCTCGAGAGTTGTCAC ACTGTTGTGCAATAACTTGAGCTCTCTCCAGCTGAGAAGAGTTGTCATTG GGCTGTGCACGGATACACTCACTTGAACGGAACCGGCAACATTGACACTG CCAAAAGCCACCAATTCAGCTTGGGAATATCGACCACCAAGGAAAGCCCC TGTCCCTTTAGGTGTGATAGGCGAAGCACTGTTGAAGATCTTCCTTTGCG GATAGAGTGGCATACGCGGTAGGTGAGCAAGCTGTTGCTCGTGCCTAACA TCACGAGGGGCAGCACCAGCATGAGATGGTGGAAATGTAACAGTATGCGG TGACTTTGATGACAAAGAGGATTTCTCTCCAGGACGAGGTGGTGTGATAC TTGTCAAAACAGAATTCGTCAATGCGGTCTCTGCCGCCAGACATAGTGGT ATCACAAGACGCTGCCGTGATGGCAGAACTCGGCATAATCTCTATCGCGG CAGGAGCTGCTGCAGCAACTTCCCTGCCTAACTTTACAGCATCAGTTCTA GGAGGTGCTGACCTACTAATAGGAGAGGGCAGGTCCTCCTGTTCATCAGC ACGATCACCCCATAAACGTCTCGACACAAGAATTTTGCTCATGGATTTTG TCACTTTGGGAGTAACTTTTTTACTCTCTGACGAGGCACAAAAAAAATTC TCCAACATGAACGTCAGCCTCTTGCTTACCCACAGAGGGATTGTTACCAA CCATTGACGCCTTAGTTCCTGATGATTCCGAAACTCTCTTCTCCTTCTGA ATATCTGCACCACTATTTTTGTTGTTGTCCCTTTTAGGATTGTTACTCAC CCACAGAGGGATTGTTACTCACCATCTCCTTCGGAATTGTTACTCACCAT CTCCTTCGTAATTGTTACTCTAATGCTTATCAGGAACTATCCACCCCAGC TTAGCCACAACTTGTTGGGGCGTGAGAGATCCTACATCTACCTTGATTCT CCCTACCTTACGACTGTCATGTTTGAATTTGAGTTCATCCGATGTTGGAA CCTCATATATCATCAAATCACTCCAACAAACCCCGTAGATTGTCGTAGTG GGCTTCTGCATCGACAACAAATGGCAGTCTTTCGCCTCATGTATCGCCCT CTCACAGTAAATGCATAGAATGGTCGTGCAAGCATCTGCCATATGGCCAC CTTGTCGCCACACCTGAAACATGTGATCTTGTCACTTTTCTGAGCTTCCC TATCCATACCACCATTAGATGAAGTGCCATCATTATCAATCGTCCATCTC CTTCCTCACGTGAAGGTTTTGGTAATCTGAGCTACTTGATGCTGGCGCCT AGCATTGCAGCAACAATCAAGTGGGGCACTACAGTGGCAGGAAGTGATGC CTGATGGAGAAGAGGAATGCAGTTGGGTGGTGGCTACCCAAAGAAAAGAC GGCACAATAGCCCGTAATCTGGTCAGGGATTCTCCTTCAGATTCTGTGGT CACCCGACGGCTTCTCATAGTGGCCCTTTTGCGGTTGTTTCCACTCCGGC GGCCAGTGACTTGGGTCTATACCTACCGTTTAGGTAGCACCATCGAGATC CAGCTAAGGCAAGGAACTTCATGTCGCGGCTGCTGCTCCACTTCGCGAGC TGCGGTCTTTTCGTCTAGATCACGTCAGAGTGAGCTGCTGCACTGAACTC ACAAATTCAGGCAGATGAGTGTGCATATAATCCACCCACTGATGCCATAT CAAGATCAGCGCAGCCCAAGTGTGCTTCTCTGTTGAGTTCCGGAGTATGA CTTTCATTGGTTGTACCTAGCAATGACGTTGTTTACACATCATTGAAGGC ATTGCTGGGAGTTTTTTTGGACTTGCTATATGGATGAGGATCTGTATTCT AGCCTTCAGTGGTTGGATCCGGCAACGGCGGCGCTTATTCAGCATTTCCC TTCATGAAGATGTTGCCTTTGAATAATATATATCTCGTAGTCCTAGTGTT GTTAGGGATGTCGATTGTTGTCCTTCACTTCAGCATGACATTCTCGATGT AATGTCCAATTATTTTTCCTTTTTCCCTTTAATTTTTTTTGCTTGTGTGT ATCCACGTCTCAATTTGCTTTTAACATTATGTTATTGCAGAGATTGAGTA CACTTGGCACCAACTTGATATCAATATATTTGCCCTTATCGTGAAAAAAA TCCACGCAACATTTACCAAGAAAAATTTAAGTGTAGAGATCATCCAAGAC CCCAATATATGCTCATGCCCACTAGTACATGTGCTTACTACTACATTTGA GACCACCTTTGTTCGTTTTCAGGCATTATCGGCCGGTTCACATTCACAGA TGAAAGGAGACTTGGTAAGCTGCATGTCCATATATGTGTTTGTGTTTCAG ACATTCTCTAGATCTTTTAATTTCGACTTGACATATCTACCGTTACAACT GCGCGATGGTGGGTTACCAAAATTCAGGTGAAGCTAAGAACGATCACAGG AAGCGAAGCGATTCCGGATGCCGACATGAGTAGCGACTTCCCTGTCCTGG TGCAGGTCAGGGCGCCGCCATGGCGCCGCGTGGAGGAGATGCCACGCCCC AGCATTGACATGGTAGTAGTATTTGATTCGGTGTACCCGCACCATTGGCT CACCGGCTACTTGACAGCCATGAGGATCGTTGTCAACAAGCTCAGCTCGA ATGACCGGCTCTCCGCTGTGTTGCTCCAAACCCATCCACACCGCCTAATG GAGCTTACATTCATGACCGACCAAGGCAAGACTGATGCCCTAGACCTGCT CACAATAAAAGATAATTTCGTCATAGACTATAGCATTACCAATGTAGCCG CTGGTCTACGAGAGGGAGCCCAGGTATATCTGCGCCTGAGTAACATATAA TTTTCGTATTACGTGATCATTTCTTTTTTCTTAACTTTTTATACGTATGT ATATGTACTAGATACTGCGGGGGCGTGAAGCAGAGGAAGGCCACATCGGC GTAGGCTGCATCTTGCTTCTGTCATCCCTGATGACGCCGATTCCCACACA GCATGAAATCAGCCCCGAATTCCCGGTGCACACCTTTGGTGTCCACTATA ATTCCCATAACCCGGAGAGCATGAAGTACATCGCTGACCAGACCTCAGCC ACCTATTCCCTCTTTGGGGACCTCCAAGATGTAAAGCACGGCATGGAGTT ATTCATGGCCAGCATCCTGAGGGTCGCCGCGACCTCCATCAGGATCACCA TAAGGGCTCACGACAGCATCACCATATCATCCATCGAGTCCGGCAGCTAC AACAACAGCGTGAGGCCGGACAAACTCTCCGGGGAGATAGAGATCCGCGA CATCTATGCCGGCGAGCAGAAGAACTTCATCGTCTACCTAACGGTGGCAG AGAGTAAAAATAAGCTTGTGACCATCGGAGGCCAGTACCGGAGCCTCAAC ATGATGAGCAAGCAGCTGCCTGACACGGACGTGTTCGTCCTTAGACCACG ATCGGGGTGCTCACCTGCAAAGCTGTCCGTGCACCACGACGTGGCGGCAG AGCTGGCACGGATCCGGCTTATGAAGGGCTTATCGGCGTTGGTCGAGCCA GGCAAGCGCCTGTACATTATGCACATGGAGAACCTATGGGACTCGGTTAG GCTGCCAAAGGATGGTCAAGGTCCACCCGAGGAGACTTTGTCGCGCCTCC GCAGGTACGTGGATGAAATGAAGAAGCTCGTGTGCCGTACCGGGGTGAAT CCGAAGCAGGTGCCTTACCTGATGTCGTGGCTGAGTTGCCATCAGTGGCA GCGTGCGACCACCAAAGGCTCGTACTACTATGACTCCGGTGCTTTCACCC TAGCGCAGCCTGGAGATGCAGATGAGGAGGATGACAACTGA

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.