Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA043047

[Submit comment/correction]

Sequence	AA043047
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA043047
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	ATGCCGACTGCGGAGACACGCTCAAGCTTGGATCTTGCTGACCAAGACAC CTCCTTGCAAATCCAGTTCATCTTGCCGCAGGGGAAGACGCGGCTGGCCA AGTACAAGGTTGAGCACGAGGTTTCTTGGCCATATTTCCTTATCGGTTTA CAGGTGCACCCTCCACCCCCTTGCCCGAGCTCGTCCAGAACTCCAGATCC CCGAGCTCCTTCTGGCTGCAGAGCTCCAGCTCGGATCCAATCCGGTCACC ATTTTCTACTACGTGCCTCAGGCCATTAGATCGATAAGTAATTTTTGCCT CCCTCTCCCCTCTCCTCTCCCTGATCTCCCCCCCCCCCCCCCCCCCCCCC CCCCCTGTGTACGTGTCTAGTTGTGCTCTGTTTTTTTGTCCTCTGTTACA TGTTCAAATGAGAGACTTAGCATCGTATGATACACTAACTGAATCATGAT TATGACCAGAGCCACCTTATGCCCGAGACACTAACTGAATCATTACTTTC TTCATTTTAATGTGATTTGTGATCCAAGCATGAAGCAGTACATTTCTAAA TCTTTTTGCACATTTTTTTATTTCGTATATATTTGGCTATACTGTCTTTT TAACTTAAGACAACCTCTGCCAATTCTCTTTTACATTTCTTTCATGGGAA GATTTCTAAATCATGTGTAACTATTTGACAGGTTTGGAGTTAGATGATGT TTATGGGGAAATCAGCCCCTTTGCTATCTTTTATGGAAATCAAGGAGATG TAGATTTATGGAAGCGCTGATGTATTCCTGAAATGGATAGAATTAGTTTC ATGCACACTTCCTCTCCAACTGTAGTATTGTATGCTCAGATCGTTTTTGC GTGCGTGAAATTCATCACTGTGATCTTTGACTGATCCAATTCAGTAGTAG TAATTGACCTAGTCAGATAAAGATACACCAATATTTGATCTTACATACCG TCACATACCTCCATCTCTGTTTCCTGAGTGCTTAACGTAGTTTTGAAATC TAGATTTTCCAGATCATATTCTACCATCGTTGTGTTCTATCCAACGTAAT GGTACAGGGCAAGTTTCTTTGTCCATCCAAGGTCCCAAAGGCCCTACTGT TGATCATTGTAAAATTTCTTAGATTGGAAATACTCCTACCATTGGATATC ACATCAATCAAGAAATACTTCTGCAAATGTTGGGCAATCACTACAGCCTG AAACTGAAGCACACGATCCAGCAAGCATCTGGAAGCCAATATCATCTTCT CTGGATGCATTTTACACGTATTCAAAGTGATGTTCTGAAAGTGATGTTCT ACAAAGTGATGTTCTGAAAGTGATGTTCTACAAAGTGATGTTCTACAATA TTATTTTTGAAACAGAAGTACACCATGGTTTGATGTATTATCCAAAGGAA CCAAATATTGTGTCCTTGAGAAACCAACTTTATGTATATGGAAAACTTAA GCTTGCTTCCTTTCATGTTGTTCTTTAGTGTGTTCTAATGATGGTGATAC ATCCTATGTATTTCTGCAGGAGTGTTCTTTGTCCAAAGTACTGGTCTTAC TGATCCTTCTGGCATACTTTCCAACAGCAAAGGAACTGGATGGAATTATC ATCTAAAGTGCATAACCTGTGGACACTTGTATTACCACAGATGGTTCTGC TTCATCAGGTTAAGAAATTTTCTTCTCTACTCCCAGTTTCTTTCTAACTT GATCAGTATCAACATGATCAGTTTCTTTCTACTCTGGATTTAGTCATATA CTTTTCAAATTTCTTAGGAGTATAGAACTGTTGCTAAATTACTTTTTAAA TTCAAGTCCATAGATCACTTGTAAGTTTTGTTCATGTCTAGGGTGCCGGC GACGATGCCTGTCAAGAGGCTGGTGATCCGGGCATCGAGGAGTTATATAT GGGCGCAGAGGAAGGTCAGCGAAGACGCCGAGGTAGAGACAGGAAGGTCG CCGGTGACTCCTGGACTTTGGCGCCAAGGGGCAGCAACAAGCCAAGCGAG GGACCTCACGGCGGGACCGGCCTGGCCTTGCTCTGCCTTCCCCAAGGAGG ACGGCTGGGGCAGGAAGGTCGCCGGCAACTCCTGGACTTCAGCGCCAAGG GGCGGCAGCAAGCCCGGCGAGGGACCTCACAGCGGGACGGCCTGGACCTG ATCCGCCTCCCCGAGGACGAAGACTGGAGAAGGAAGGTCGCCGGCGACTC CTGGACTTCGGCGCCAAGGGGCGGCAGCAAGCCCGGCGAGGGATCTCACA GCGGGACCGACCTGGACCGGCTCCGCCTCCCCCGAGGACGACGGTGGGGA CGGGCTTGGAGCTGGAGCTGGACGAGGGGATCACGGCGGCCGCCGGTGAT TGCGGGCGGACGGGGGGATCACGGTGGGCGCCGGTGATTGCGGGCGACGG ATTCCAAATTCCAATCTTGAATATAGGCTAATTTGCCACGATTTGAATCT GTTTTGGAGTTTTTTTGTAAAATTCAATTTGAACTAAGCCACGAACATTA ATTCGGGCCGGAGGGAGTATTAAAAGTAGTCTAGATACATTGCTTCACAA AGCTAAAGCATCTTATATTATGACACGGAGGGAGTATAAGGGAATTTATT CTTATCTTGTTATGGGTTATGACGTTCACAACACAGAGCTATTGTACCAT CGAAACAGAGGATGATCCTTTAGCTAGCTCAGTTTGGCAAAGATCGTTCT TCGTTGCAGTTTCAGCCAAGCTACCTGCCCATTCATGCTAGCTACCCCGA CCCCGACAACTCGACGTGCCTAAAAGCCGCCTTATCATAGGAAGAACAAA AACACATGGCATGAACATGCACGCACAGGCACACACGTACCTGAGGACGG CCACGACTGCATCGTAGCCGGAAGATCGAAGGACCTCTCCACGGGCAGCG CCGCCGTGCCCATAGGCATACAACCGAAGCACGACTTGCTCGTCGGCATT GCCGGTGGTCGGCGACTGCGACGAGGATGGCCGGAGAGAAGATCGAGAGA AACCGGAGCCGATGCTTGGCTTGCTTGGTTGCTTGCTCAAGGCGTGCACG GTTGGTTTCTCGCTAGCTCGAGTCACTTGCACGCATGCGGATAGGGGGGC AACGCCAATGGTGTTCCTTTTAACGGGGTGGGACGACTGGCCGTGGCAGG GAGGGTCTGCCTCGCTAGCTAACCTGTCACTTTCGGCCGTACGCCGAACT GGCAAAGACCGGCCCCTCAAAGCCTCACAGGCCAAAGGATATACCGCTGG CCCCTTTCAACAAATCATGGTCAGTGGAACTGTAGTTTACTTGCAAGAAA GCACGGTTGCTTTTATTATTGCCGATGACTCCACTTCTTGCATCCCTACT CGTAGGATTTAGCTTAGCTTTGCTGGCGTTTAAGTATGGTAGCTTGGCAT GGCTTTACGGCTCTTCATCCATCCATCTCCCACAACACAAGTCTCCGATC TGATCCATCCATCAGCTGCCCATCATTGTCACCCCTCAAAAAATCGTCAC TTTCCAGAGAAGCACACGCGCGTGGCAAGTGTGTTTGTTTAGTGTTTCGT GTGCGCTTGGACTATCGTCCAGCCGGCGCGCGTGTTAGTTGGAGGCCGGC CAGCGTAGAAGGAATCGCCGGAGAATACAACAAAAGAACGTGCTCCAAAA CGCGACCATCCGCCCCTACGTCTACGTGGTATGAGCTGCGTCGTTGTACT ACTGTAGTTGTTATAGACGTGCAGACCTGGCTGGGTCAGTCAAGGACAGA ACATGCACTCCAATCGCTAATATTTCTATAGACTTGTTGAGCCCCTAACG CCAGATTATTGCAACACGCGCGTAGTGGTTAGGATGATTACATGGGATGG GACGGACCCGACCTTCGTCAAAGGATCGATCGTTCGCAATAACAAACACG TCCACGGTTTACACGTTGGTTTAATTTGTTTACTTCGCACACCAATCAGG AGTAGCTGACCAAACCATCTGTAGTAAGAGATTCTAGTGATGTTGTGTTG TATAGTTTGCATGTGGATCAGGTAGAACGCGTGTAGCGTGAGTGGCTTAG CAAAAAGACCCGGCCTTGTCGTCCGACGGGAACTTGCAAGCGCGCGTTCA CATTCACCGGAGCACATTTTTTCTATCATCACAAGTCTATAGCTTGAGTA CTATCATCGTAGGTTGGGAGTAGTAACGAACAAGTCGCGAGAATATGCGG TTAGAACATCCGTTTTAGAGAGCAAATCTTGCACGTCGTGCAGTCATCAC ATGATTCACATCAGCTTGGCATTGATTTCCTAGGATTTACTATATTCATG TCAGGGCTGATGATGAAATTAACAAAGCGACCGGACAGGAGCATCCGATG CGTCCACACGATACTTAAAATGCAATTTTACTAATCGGATATTCTTTTCT TAGAGCAACCACATATCTATTCTATCTATTATATACTAAAATATACTAAA AGTAATATAATGGTGTTTTTCGAGGCATTAGGTTGATCCACATCAGCTCA ATTATTTAGATGGTTGGATCTAAAATTTGTGGTTAGGATTTAATAGAATA CTAATAGTTACGTAACTATATGTTTCCATTTGACACGTTCGATTATGTAC ATATCTCCAAATTACCCGTTCACTGTTAGATCATTAATTTAAGGCTAAGA TTAAATTAGTCTCTCACGTACCATGTACCTTTGCTTAAAACAAAATACAC GTCATATGCCCTAACACTACATCTGCCGCCATGGCCTTGGGCCATCGCCT ATGCAACATCGGGCACTTCCAGCCCTGTATCGTTCCTCCGAGCTTCGTGT TGGTGCTAATCAATCAAGGTATTGCAAAAGGAAGTGCCCGTCCGCCCAGC TAGGTATCTCACCGGCAACGCACGAACTGTCAGCAACAACCTGCACCTCG AGGCAGATGCTAGATTCTCAAGTCAGGTCCGCCTGTCCTTTTGGGGAAAG AAATTAATACAAATTTCACTTATAAAAAAAATACTATAGTAGATATAATG AATTGGTATATAACCACAATTTCTTCTACGTTTGTTGATCTGGACAGGAC AGATGAATCATGGAGCACACAAGAAGTTCCTCATCTCTGCAAGCCTGCAG CCAACAATTTGCGTGGCCAAGGACAAGTTTTTCTTCAGAAACAATCTCAT GTCGTTGGGATAAAAGGAGTAGCACGCTGGCCGGTCCTTTGGGTCAATCA GGTCAGAATTTTTAAAAGCAACCGAACAGCACCAAGATGAATGATCATGC ATACACATGATTTTTTTGCTACAAGGATAACTTTAGCAGAAACCAAAGAA AATAGAAACCAAACTTAAATTCATAAGGATTGAATCTAGGTCCTTAATAA ATCGTAGAATAAGTCCTCCAATCAAGTGAGTAAGGCTTATTTCCAATTTT TATAGCTAAAGCTATTAGTTTCTGCATAATTAAGAGATAATTGTATCTGA GCATATTAAATTCTTCTCAATTTTCTAATAGCCACATTATACGTCCCCCT TATGTATGTTGTGGCTTTAGAACAAATCGCAGATAATTGCTTATCTTATT TAGTGCGATGGTGCTGGTAAAACATTGAACACGGTCAGGAAATTGTACAT TCACTCCTCCAATCAAGTAAGTTAACCTCATTTCCTGCACATATACTTAT TAGTCATCCTTAGTTTCTGCATGGATAATACCAAGAGTTCCTAGCTATAT AATTAGGAGTTAATAAAATATCTGATCATGTCAAATACTTCTCAATTTTT TAAAAGATTCTTATGATGCCTCATGTTTCGAAGTGTAAGCTAATCACCAA AATCTCTGATGTTATTTAGTATTGTACTGGTAAATATACTAAAAAACAGA TATGTCATATCTCATTTAGATGAACTATGGAAGTCCTTGAAACCCTTATT GCACTCGTACAAAGGGGAAATTTGAATGGCAGTCAGGCACCAATATGACT TGTATTGGTCACATGAAGGAAACATGTATCACAACAACTTAGACGACCAG GAAATAAACATCGTAGTTGAGGGACCCATCATTATCTTGGCTCACTGCAT TTCAATTATTTGATGTGCTGGTACTGAGGTAAAAAATGATACATAATGTA TAGCATGAAACTTACGAGGCCAAAGAAAATGGATAAAGAAATTAAAGGAT AAGAAGATGAGTGTATATAAAAGGTTGCAACATGGATCATATTTAATTTT GGTTGAGGAATAGAAGTTTGAATTATCATTCGGTTCCAAAGATTAACCTG ATGTCAAGAAATTTTTCCACCTTAGTTTGAAGCACCAGGTAGGAAAAATT CAATTATTTCATGAAAATCAAGAGAGTAAGTGTGCAACTAAGATGATAAT TAGTGTGTGAGTAATTGTGGGACACAAGGTTTCATGTCATCCTCTATACA CTAACTGAATCATTACTTTCTTCATTTTAATGTGATTTGTGATCCAAGCA TGAAGCAGTACATTTCTAAATCTTTTTGCACATTTTTTATTTCGTATATA TTTGGCTATACTGTAATTTTAACTTAAGACAACCTCTGCCAATTCTCTTT TACATTTCTTTCATGGGAAGATTTCTAAATCATGTGTAACTATTTGACAG GTTTGGAGTTAGATGATGTTTATGGGGAAATCAGCCCCTTTGCTATCTTT TATGGAAATCAAGGAGATGTAGATTTATGAAGCGCTGATGTATTCCTGAA ATGGATAGAATTAGTTTCATGCACACTTCCTCTCCAACTGTAGTATTGTA TGCTCAGATCGTTTTTGCGTGCGTGAAATTCATCACTGTGATCTTTGACT GATCCAATTCAGTAGTAGTAATTGACCTAGTCAGATAAAGATACACCAAT ATTTGATCTTACATACCGTCACATACCTCCATCTCTGTTTCCTGAGTGCT TAACGTAGTTTTGAAATCTAGATTTTCCAGATCATATTCTACCATCGTTG TGTTCTATCCAACGTAATGGTACAGGGCAAGTTTCTTTGTCCATCCAAGG TCCCAAAGGCCCTACTGTTGATCATTGTAAAATTTCTTAGATTGGAAATA CTCCTACCATTGGATATCACATCAATCAAGAAATACTTCTGCAAATGTTG GGCAATCACTACAGCCTGAAACTGAAGCACACGATCCAGCAAGCATCTGG AAGCCAATATCATCTTCTCTGGATGCATTTTACACGTATTCAAAGTGATG TTCTGAAAGTGATGTTCTACAAAGTGATGTTCTGAAAGTGATGTTCTACA AAGTGATGTTCTACAATATTATTTTTGAAACAGAAGTACACCATGGTTTG ATGTATTATCCAAAGGAACCAAATATTGTGTCCTTGAGAAACCAACTTTA TGTATATGGAAAACTTAAGCTTGCTTCCTTTCATGTTGTTCTTTAGTGTG TTCTAATGATGGTGATACATCCTATGTATTTCTGCAGGAGTGTTCTTTGT CCAAAGTACTGGTCTTACTGATCCTTCTGGCATACTTTCCAACAGCAAAG GAACTGGATGGAATTATCATCTAAAGTGCATAACCTGTGGACACTTGTAT TACCACAGATGGTTCTGCTTCATCAGGTTAAGAAATTTTCTTCTCTACTC CCAGTTTCTTTCTAACTTGATCAGTATCAACATGATCAGTTTCTTTCTAC TCTGGATTTAGTCATATACTTTTCAAATTTCTTAGGAGTATAGAACTGTT GCTAAATTACTTTTTAAATTCAAGTCCATAGATCACTTGTAAGTTTTGTT CATGTCTAGGGTGCCGGCGACGATGCCTGTCAAGAGGCTGGTGATCCGGG CATCGAGGAGTTATATATGGGCGCAGAGGAAGGTCAGCGAAGACGCCGAG GTAGAGACAGGAAGGTCGCCGGTGACTCCTGGACTTTGGCGCCAAGGGGC AGCAACAAGCCAAGCGAGGGACCTCACGGCGGGACCGGCCTGGCCTTGCT CTGCCTTCCCCAAGGAGGACGGCTGGGGCAGGAAGGTCGCCGGCAACTCC TGGACTTCAGCGCCAAGGGGCGGCAGCAAGCCCGGCGAGGGACCTCACAG CGGGACCGGCCTGGACCTGATCCGCCTCCCCGAGGACGAAGACTGGAGAA GGAAGGTCGCCGGCGACTCCTGGACTTCGGCGCCAAGGGGCGGCAGCAAG CCCGGCGAGGGATCTCACAGCGGGACCGACCTGGACCGGCTCCGCCTCCC CCGAGGACGACGGTGGGGACGGGCTTGGAGCTGGAGCTGGACGAGGGGAT CACGGCGGCCGCCGGTGATTGCGGGCGGACGGGGGGATCACGGTGGGCGC CGGTGATTGCGGGCGACGGATTCCAAATTCCAATCTTGAATATAGGCTAA TTTGCCACGATTTGAATCTGTTTTGGAGTTTTTTGTAAAATTCAATTTGA ACTAAGCCACGAACATTAATTCGGGCCGGAGGGAGTATTAAAAGTAGTCT AGATACATTGCTTCACAAAGCTAAAGCATCTTATATTATGACACGGAGGG AGTATAAGGGAATTTATTCTTATCTTGTTATGGG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.