Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA040388

[Submit comment/correction]

Sequence	AA040388
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA040388
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	ATGGATAGCAGCTGGGACTTACCCACAGACGCCGTGGTCGAGATCCTGGT GCGGCTTCCGCCCAATTCCCGCCGCCGGGTTCGCCTCGTCTGCCGGCATT GGCGAGACCTCATCGACCAGCGTACTTCCACGGACATGCGGACCCGCGCA AAGTTCATTCTTGTCGGCGGACATGGTTCTTCCCCCTACATCATAGACAT CGTTACGAAAGAGATAACAAATCTGTGGCACAGGCCTCCGACGACAGACA TCGCCACGGCTCTACACTACTACTACAGTAGCATGCGCATGGTCGGCACC TGCAATGGCCTCGTCTGTCTATGCAACGACTGCACGCCTGGCGGGACCAT CACCGTTGCCAACCCGTCAAGCGGCGAGGCTCTGCGTCTCCCACCGCTGC CGATGCCGAGCGCCGCCATTCACCTGATGAGCAATGGCGGCAGCAGCCGG AGGTGGCACCAGACGTACTGCTTCGCGTACCACCACACGACGGGGCAGTA CAAGGTCGTGCATGTCCACGTGTTCATCCTCGGGGAGGCCTCGTGGCGGG ACGTGCACACAGGGACCAATGATGCAAGGTGCAAGATTGGCGGCAGAAGC CTCGCCGACATTGATGGCACCGTGTACTGGCTCACGGAGGAAGCTGGGAA GATCATGTCGTTTGACCTCAAACGTGAGCGCCTCACGCGCACCGAGCCTC TGCCTGTGCCTGCCATGCCAGGCGCCTGCCGCCTGACGAAGGTGCACGGG AGGCCGGGGGTTGCCATCGGCGACGGCGACTCTTGCACGGTGTGGGTCTT GGAGGGCGAGAGGTGGAGCCACCGGTACGTCTTAAACGCGGACGGGCTGC CAACAGGGTTGGCTTGGCGGGAGCTTGTGGTGCCGCACTTTGTTCACGGC GACTACCTCCTAACGTTATCATGTCAAAACCGGACTAGACATTTTGACTT GTATCGCCACAAGATGAGAGGAACTTCATCAAGGTCGCAAGACGACGGTG TGGTGCAGATAAGACGCAATGATCCTGGCGGCGAGAAAGTGACCTCTTTC GGGTGCTCTATCCAGACTTTTTCCTACAGCGATACAAGCGAGTCCTTGAG TGTCTACTATAAAAGTTACGGTCAGGTAGTTTGTCGAGACTACTCGGATA ACGACCGAGGTCCCACGTACGTGTTAATATATGGGCACTTTGCGGTGCTA GCTATACAAGGAAGAATTGGACTCTGGTATATAAGAATCTGAGTCTGATA CGTACGTCCGATCTAGATACAAAACGTGTACAACACCGACTCAACATATT ATAGCTAACACCCTCTCTTAATCACAACTTCGACAAGTTGAGATTATGTT TGACCTCCTCAAAAGTACGAACTGATAAAGGCTTTGTGAAGCCATCGGCA ACTTGATCTTTCAAAGGTATAAACCGAATTTCAAGTTGCTTATTCAGAAC TCTCTCTCTGACAAAATAAAAATCGATTTCAATATGTTTTGCTCGTGCAT GAAATACTGGATTGGCTGACAAATACGTTGCTCCTAAATTATCACACCAT AGGCATGGTGGTTGTCTTGTCTTGACTCCAAGTTCGACAAGTAATGATTG TATCCAAATTATTTCAGCAGTTGCATTGGTCACAGATTTATATTCTGCTT CTGTACTTGATCTAGAAACTGTTGCTTGCTTTTTAGCACTCCATGAGATA AGATTTGGACCAAAGAAGACAGCAAATCCTCCAGTTGATCGACGATCATC AACACATCCTGCCCAATCTGCATCTGAAAATGCACTAACCAGTGTAGAGT CAGATGGCATAAATGTGAGTCCAACACTGATTGTTTCCTTGACGTATCTC ATGATGCGTTTGGCAGCTGTCCAATGCACAGTTGTGGGAGCATGCAAGTA TTGACAAACCTTATTGACTGCATAGGAAATATCTGGCCTTGTGAGAGTCA AATACTGTAAAGCACCTACCATACTCCTGTAACTAGTGCTATCACCAGGG CCTAATAATTCTCCTTCATGTGCTGTAATTTTTTCTGAAGATGATAAAGG TGTAGATGAACCTTTACAGTTTGTCATACCAACACGAGCAAGAACATCTT GAGCATACTTGGCTTGGCTCAATACAAGTCCGTCATTAACTTTCTGAACT TCAATCCCTAGAAAGAAGTGAAGATCACCAAGGTCCTTCAAAGCAAACTC CTTGCTTAAATCTCTCAACAGAGCATCTGTTGCAGCTTGTGAAGAACTAG TAACTATGATATCATCAACATATATAAGCATATAAATTGTGATGTTGGAC TTGTGATAGATAAATAGTGATGTATCAGACTTTGAAGCAATAAAACCAAA TCTGATGAGTTGAGTACTTAAACGTGAGTACCATGCTCGAGGTGCTTGCT TTAGTCCATAAAGTGCCTTGTCCAACTTGCAAACATAGTTCGGCCTTTGT CTGTCTTCATAACCAGGTGGTTGTTTCATATAAACCTCCTCTTGCAGAAC ACCATGAAGAAACACATTCTTGACATCTAACTGTCGCAGACTCCATCCCC TAGAAACAGAAATTGCCAGAACAAGCCGAACAGTTGCAATCTTCACAACA GGACTAAAAGTGTCCTCATAGTCTATCCCATATCGTTGCTTGAAACCTTT GGCTACAAGCCTAGCCTTATGCCTTTCAATGGAGCCATCTGCCTTCCTTT TAATTTTGTAAATCCATCGACAGTCAATGATATTTGAACCATGCCGAGGT GGAACCAACCTCCATGTTTTATTTTTCATAAGGGCATCATATTCATCATC CATGGCCTTCTTCCACTCACCATGTGCTAGAGCGGTCTGCAAGTCAGCTG GTTCTTCTGAAGATGCTGACAAACACCAACGAACAGTGCCATCTTTATAC ATTTTTAAATTAGCTATTCCTTTAGATGCTCTTGTGGCTGGCCGAGAGAC ATCTGGCACACGCTGCTGTACAGGAACCAAAGAAACAGAAGATCCCGGGC TGCTATTTCTTGTGCTGTTGTTGCTATACGTAGAGGATCCTGTGGCCTCG CGTGTGGCCGATTGCGTGGCACTGGACGGCGTTTGAGAGCTGGCGGGCAC AGAGGATCCAGCTGGGGACCGCTGTGCATGCAGGAGACCATGCCCCTGTC CATGCGTACCTTGCAAATGAGAGGAGGGCAAAGAATTTGACGCGGGCGAG CTGCCCAGAAAATCCACCTCGTGTTCCATAGTTTCGTCCTCCTCTGCTAA TATTTCATGAGGCCTGTTTGAGCTATTTTGATCATCGTTTTGGCTCAAAT TTTCCATAGTATGTTGTTCTGGAACCTGCACAACAGTAGTAGGACTAGAT GTGGGGTTAGTAGCAGGAATATTAGCCATAGTTGAAACATCAATAAGTAC GTTCCCTTGTTCAAAATCGCGAAGGGAAGAATCAAGTAAGAGAATCTCCT GCCGAAGAAGAGCACCAGCATTGGGATGAAGCGAGGAAAAAGGGAAAACA GCCTCATCGAAGACAACGTCCCGAGATATATAGATACGACCACTGGAAAT CTCTAGGCATTTGACACCTTTATGACGAGGACTATACCCCAGAAACACAC ACTGTTTGGAACGGAAGGCAAGTTTTCTCTTGTTGTAAGAACACAAGTTA GGCCAACAAGCACAGCCAAACACACGCAAAGAATTGTAATCGGGACATGT ACCTAGCAGGCGATGGACAGGAGTATCATTGTTGATTACTTTGCTTGGAA GCATGTTAATAAGATATGTGGCGGTAAGGAACGCTTCGTCCCAAAATTTA AGTGGCATATGTGCATGGGCAAGAAGAGCTAGTCCTACCTCAACAATATG ACGGTGTTTTCTTTCAGCAGAGCCGTTTTGTTGATGAGCATGAGGGCAAG AAACATGATGGGAGATGCCTTGTGTCTGAAAGAGAGAGTTGAGTTTCACA TATTCACCTCCCCAATCAGATTGAACGGTAAGAATCTTTTTATCAAGTTT ACGTTCGACAAGTTTTTGAAAATTCACAAAGGCAGAAAAGGCATCGGATT TTTTCTTAAGCAAATATATCCATGTGAATTTGCTATAATCATCAATAAAA CTTATATAATAATCATGACGTCCAACAGAAGTGGGAGCAGGGCCCCATAC ATCAGAGAACACTAATTGTAGGGGAGCTGTGGACACACTAGTAGACACTG GATAAGGAAGTTGATGACTCTTAGCCTGCTGACAAGAATCACAAACTGAC TCTATACGAATATCCTTAACAAAAGGAAGTTTATTTTTACTAATGATTTG ACTAACAATAGAAAGAGATGGATGACCAAGACGACTATGCCACTTTGCTT GAGAGGGCTTGGTAGCGGAAAAGACTTGCTTCTGTGTGTGAGAGGATACT GACGATGATATAAGTGGGTAAAGACCTCCAACGCATCTCTCTCTATGAAT TATTTTCCGCGTGACCTGATCCTTGATCAAGAAGAATAAAGGATGAAATT CTATAAAGGCACTATTATCAAGAGTAAAGCGATGAACAGAGAGCAAATTT TTCGATGCGTTGGGAACATGCAAGATATTACGAAGATGGAAATCCTGAAC AGGGGTACGACATATTGAATGACCAACATGGGAAATATCCATACCTTGCC CACTAGCAGTGTTGACCTTGTCATGTCCTTGATACCTGTCGCGAACGGTC AGATTGTTGAGCTCGCTCGTGATGTGATGTGTAGCCCCGGTATCTGGGTA CCAGTTGGTGTCCATACCATAGGAGGCAACGTTCCCCTCCTTGTTTCCAT AATCATCATCATTGTCCTGGAACCGGTACCAACAATCTTTGGCAGGATGG CCCTCCCTGTTGCAGATCTGGCAAGTGACATCCACCCATGGGGTGGTGCG ACGTCGTCCACGGCCACGGCCACGACCCCCTCCAGGAGGCGCTCGGCCAC CACCACGGCCTTGGCGTGGCTGTGAGTAGTCGTCACGGCGGTTGTCACGT CGGTCATCACGACGATCACGGTCACCACGATCTCCACGGTCGCCACGCTG CTGGTTGTAGTTGGGGCGAAACGGGCGGCCACGAGATGACAAGTTTGCAG AAGTTTCAAACCCATTGCTTGCCTCGTTTAGCAACATCTCATTGCGTTCG TCGTATGCATGAATCTGCGAGTAGAGGGACGGAAGGGTTATTGTGGTGGA AACCACTCCGATGGCAGCAACAAGTGAGTTATAGCCTGCTCCAAGTCCGG CCAGGATAAAGGAGATGTGCTCCTTGTCGGTGATGGGGGAACCTGCAGCA GCAAGTTCATCGGCAATTTCCTGCATCTTGGTGAGGAAAGCACCGGTAGT CATGTTGAGTTTCTTCGTGTTCGCCAAAGCAATCCGGAGGTTCGTGACCT TTGCTTGATTCTGAGAAGCGAACATCTCTTCTATTGCCTGCCATACGGCG GCGGTGTGCTCGAGGCGCTGAACGTGTGGAAGAACTTCAGGCGAGAGCGA TTGAAACAAGTAGCCGAGGACGATCTGATCTCGACTGATCCAATTGTCGT AGTCCGGGTTGGGGGCGGTCTTCGCCGCTGTATTGGTGGCCTTGTCCGCT GGCTGCAATTCCAGCGTGGGCGGAGGAGCAGCGTCGGTACCGTCGAGCAG TCCAACAAGGCGAGCTCCTCGGATGGGCGGCAGAACTTGGGCGCGCCACA TCGTGTAGTTCTTGCGAGTCAATTTATCTGACGGTGGATTTCCAAGGTTG ATGATCTGGGCAGTGGAAGTCGACATGGCGGAAGGTCGGGGTGGGCAGCA GCGGCAGAAGCTTTTGCGGCGGCTGGAACGATGGGGATTGGCGATCAGTT TCGTCGGCAAGAGGCCGGCCTGATACCATATAAAAGTTACGGTCAGGTAG TTTGTCGAGACTACTCGGATAACGACCGAGGTCCCAGGTACGTGTTAATA TATGGGCACTTTGCTGTACTAGCTATACAAGGAAGAATTGGACTCTGGTA TATAAGAATCTGAGTCTGATACGTACGTCCGATCTAGATACAAAACGTGT ACAACACCGACTCAACATATTATAGCTAACATCTACAAGGCAAGTTTGGC ACATAACTGACAGTGGATCTGTTGGGTCTCGTATAGATATTTGATTTTTC TCCGCATTGTCCTTTTGGGTCTTAAAGATGCTAGTACCAAACAAGGTAGT GAGGTGTTGATATGGATATGGACCGTCTGCTATTCGGTTGTTTTCTTTTT ATACATACCACTAAGAGCAATATTCACATGATTGCGTGAACAGTTGGATT TTGTCCCCTTTTTTTAGACCAACAGGAGGACATTTTCCTCCCGGTTCCAT TATGAATAACGAAAAAAAGGTAGCACAATGTCACTACATACATTGGTAGA ACCGTTCCAACTCTCTGCCACCAGGCTCAAAGCCCGAGCATAAAAGCTCT TACATCAAGAACAATAACAAAGCCGACCGTCGGTTATATACTCATGCCAT GTCACATAAAGTCATCACTAATAAGTACTTGTATAATAGATTGACTGATG GGCTGACTCTAATGAATACTAAAATATTTAAGTTTTGCTTTGTTAGGCTT GCATGCAAGACCCATACGGTTGATATTTAATGCATGCAAGACTGCGTATG GGCTGCAGTCTCTCTTTTCTTGCGCTACCTCACTAGCGAAGCGCTCTCGC TCTAATCTCTCTCTTCCTTTCTCTTTTCTCCACCTAGGATTTTTCTTACG TGAATTTGCTTACAGCCAGCTGATTAGGATCTATTATACCTGCTCTAACA ACTAACCAAACCACAAGCAAAAAAAAAAAAGCTACACTACAGGTTCCAAA CGCCAAAACATAGACTAAAAATATAGGGGGACACTTTTACAAAAGCCCTG GGTGCATCAAACACCGGCTGGATGATTCCAAGGTTGAAGTCCATCTCCAA TGTCCAAGTAAGGGTTGTCCATGTTCCTGCGCCCCCAACTCTCTTTGCGT CAGGGGACTTTGGTTCTTCTTCGACAATGCCGCCCGAGGAAGGATCAATC AAACCAGAGCCAGGAAGTTAGTTGATCAAAGTGTCTTCTTCTAGCATCAG AGTTAGCCACTCTCCAACATGGAAGGTTTTCAGAAATTCAAAAAAAGTAC GGTACACTGTAAGGGTAGGATTCAATAAACATGAAAAAAATCAAATTCAA ATTATCTGAAATGCATGCGTTGGAACTTTAAATTGTGCAATGTTTCTGGA ACGTTACTCTCCTAACATATTGTATTCTTCGTAATTTTTCAAAACTTGCA AAAATCGTTTCCACGGTAATAATAATTTCGTTCCACGGGATAGTTTTTTT TTTGACCTATGTATGCTACTAAAACGGTTTATCATTTGGATTTGATTTTT TACTCTGAACGTACGCTTTGTTTCATCTCCATCTTTTTAGAAGATTCCGA TTGTTTTTTCACAGCAACGTTTCATTTGATTATTAAAAATAAATCGAGGC CTACTTGGATACCATGGGCCTTCGTTCGGCCTTCCTTTTCGAGCACAATC TAAATACAATGGGCCAGCCCGGTGATTTTAGTTGATCAAATCTGATCCGG ACACGAAGCCAATAAACATACGTACGCGCGGCCGGGTTCATATACAAGAG ATTGTACGACGGCGACAGGTAGTAGGGCAGGACACCCAAACGAGACGGCG CTCAGGGCGATACGACGGCCGGCGGCGAGTTACGTACCAATCGACGACGT CTGCCGCGCCGTTGCCTCTAAATCTAACCGATGGACTTACACCCGGACGC CCTGGTCGAGATCCTAGCGCAGCATCCGCCCAACGACCGCCGCCGGTTCC GCCAGGTCTGCCGGCTCTGGCGGGAGCTCATCGACCAGCACACGGCGACG GACATGCGGAGACGAACCAAAATCATCGCCGTCGTCGGCAAGGGTTTCCG GTCGACCGCCTCCATGGTCGATCTCGGGACGCCGGGCAGCACGCCAGATC CGTTGTGGCGTACAGACAATGCTGCCATGGCTGGATGGTACAATTGTATG AGCATCGTCGGCACCTGCAACGGCCTCGTCTGCCTGTGCGACGACCGAAC GCCCGGAGGGGCAGTCAGCGTGGCCAACCCGTCGACCGGCGAGACTCTCT GTCTCCCACCGCTGCCGAAACCGAGCGACGATGTTCACCTGAACTACAGC AGCAGGTGGAGCTGGCACCAGACGTACGGCTTCGGGTACCACCACGCCAC AGGGCAGTACAAGGTCGTGCATGTCCCGTGCCACTTCCACTCCTTCTGGC AGCCTGACATAGTGCACGTGTTCACGCTAGGGGAGTCGTCGTCGTGGCGG GACGTCCACACCAACACCGTACCAAGGTGTAGACTCGGTGTTAGCAGCTT TGCCGATGTCGATGGCATGTTGTACTGGCTCACGGAGCATGCTGGGAAGA TCATGAAGTTCGATCTTGAAACCGAGCACCTCACGTGCACCGAGCCTCTG TCGGTACAGGCCGTGCCAAAGAACTGTCGCCTGACGAAGCTGCAGGGGAG GCTTGGCGTCGCCATCAACGGCGGCGACTCTGTGAAGGTGTGGGTGCTGG AGGGCGAGAGGTGGAGCTGCCGGTACATGTTGGAAGCCCATTGGGTGGGG CAGCGGGGGATGGGGTGCGAGCTTGCGACACCGGACCTGGTTCACGGGGA CTACTTCCTAACGCTAAAACCTCAACCCTCGAGCGGAGTCCATATCTTGT ATGGTCACAAGATAAGCGAAGCAGCAAGGTCGCAAGACGGTGTGTTGCAC ATACGGCACAAGGATCGAGGCGAGGAAGTGGCGCGTCTCACAGGCTCTAT CTACCAGATGTTTTCCTACGTCGAGACCAAGGAGCCATTGGGTGTTTACA ATGGAGTTTTCTAA

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.