Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

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GrainGenes Sequence Report: AA012028

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Sequence	AA012028
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA012028
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	CGGGTGCCCCACTGTCCCTCCCTAGACGCGACGGCCATAGCATCACATCA CAGCCAGTCGACGCACGCGGCCCGGTGAACCCTGAACGCCTACTTCACTT CACTTCACTAGGCCGCACCACCACGCCTCACTCTCACTCCTCCCCCACTG CCCTGCGTCCGACTCGAATCTCGTAGCCACCCCAAATGATTTGACGCCAG AGTTCGTTGCGGACCAGCGCAATGCCGGCGCCCGTTGCGGCATCGCCGGA AATCGCGGCGGCGTCCGAGGCCACGGCGCTCGGTAGCAGCGGCGAGCACC TCCGGGGCCACGCGCACCTCACCAACTGCATCCACCTGCGCCACCACCAC GCGCACGGGCACGCCAGCGGCGCGTCCGGCCGGAGACGCAGCCCGACGGG CGAGTCCTCCGCGTCCGCGTCCGCCTCCGCCTCCGCCGCGCTGATGCGGG ACCTCCTCGCGATGCAGCGCTCCCGCTCCCTCCGGGACCCCTCCACGCGC CGCTCCGTCGACTCCTCCTCCAACAGGGTCGCCGCCGACCCCGACCCCGA CCCCGACCCCGAAGCCGACCCGCCCGGCCGCGGCGCGCTCAAGACCCTCC TCGACCAGCTCGCGGAGAACCCGCAGCACCCCAGGCCCGCCCGCCGCCCG CGCCGCCGGTTCAAGCGCGGGACGGGACGCCGCGCCGCGCCCTCCGCCGC CGACGCCGCTCTAGATCGCCCCGCCGCGGCGGCCAGGGCCGCCTTCTCCG CCAACTCCAGCTCCCAGGAGGCCGTCTGCGGCAACAAGTACTTCTTCGGC GCCGGCGGGGGCGACGACGGCAGCGGCGAGGAGCTGCAGCAGCGCTCGCA GGCGTCGCAGGACGCGCGCAACGTCTGCGGCATCCCCTGGAACTGGTCGC GCCTCCACAACCGCAGCAGGTCCATCCTCGACATGGCAGGCCGGAGCCTC TCCTGCGGCCTGTCTGACCCCAGGTCGGCCGCGCGGAGGTCCGAGGCCGC CACCTCCGCGGGCTCCTGTGGTGGCGGCTACATGAACGGGTCGCGCTCGC ATCCGCATTTCCCGGTGACCGCAAGGCTGACTTCCTCCAACAGTTCAGAC TCCGACTCACTGCCGCTGCTCGGCGAGGGCGCCAGAAATGGCATCCGTGG CATTTCCAGGACCTTCTCCGGGGAGCTTGGGATTTTCTCCAATCAGAGTA GCGAGCTCGATTCAGACCTCATGTCCGAGGCACGTTCAGGGCAGAAGTCT CGTGGCTCGCGCCGGCACCGGAGCCTCACCCAGAAGTATGCGCCCAAGAC TTTCAAGGACGTCGTTGGGCAGAGCCTTGTTGTGCAGGCTCTCTCCAATG CCATTCTGAAGAGGAAGATTGGGTCCGTCTATGTCTTCTACGGGCCGCAC GGCACAGGTAAAACATCGTGCGCTCGGGTGTTTGCCAAGGCGCTGAATTG CCACTCTGCTGAGCACCCAAGGCCCTGCGATACATGTGCGTCTTGTATCG CACACAATCTGGGCAAGAGCAGGAGTTTGGTGGAGATTGGGCCTGTCGGC AACATTGACCTCGACAGCATTGTGGATATCCTTGACAATGTGATGCTTTC GCCGCTGCCAGCCCATCACAGGGTGTTCATAGTGGATGATTGCAACACGT TGCCGCCTGATACGTGGAGCGTCATATCGAAGGTTGTCGAGCGCGCACCT CGGCGTGTAGTTTTTGTTCTCATCAGCCCCAATCTCGAACTCCCGCACAT AATTATGTCAAGGTGCCAAAAGTTCTTTTTCCCGAAACTGAAGGAATGCG ACATAGTCAACACTTTGCAGTGGATTTGTACAAGCGATGGCCTAGATGTT GATAGAGATGCATTGAAACTTATTGCCTCCCGGTCGGATGGCTCATTGAG GGATGCACAGATGACCTTGGATCAATTGAGTTTGCTTGGGCAGAGAATTT CAATCTCACTTGTTCAAGAACTTGTAAGTTGTCCAACAAGTTATTTAATT ACTTCTTTATTAGGTCATATATATAATTGAATAATTTCAGGCTAAGTAGG AATGGTAAAAAAATGTTTAATTGGGGCAGCTATTGTTTAAGTGGTAACTC TGAACATTTATTTTTTGAGACAACTCTGGAACATGTTGTAAAGCTGATTA GGAATATTGTCATCACATGCTTCAATTTCTCATCAAATGTGTGTTTCCAT TTTGGCATACCGGAAGCAAACTTTTTAGTACAATACTTGTATTTTTTCCC TAAATAACACATCCCTTGTATTCTAAGTGTAGTGACATGATTGCCATGTC TAATACTTCACTATCTTTTTTTCCGATAAAGAATACTTCACTATCTGACA GTAACAACCAAAATTGTTCGTCTATTGACAGGTTGGCTTGGTTTCTGATG ACAAATTGGTAAATTTGCTAGATTTAGCACTATCTGCTGACACCACCAAC ACAGTGAAAGCTCTACGTGATATTAGTGAAACAGGTGTTGAGCCTTTGTC CCTGATGTCTCAACTTGCCACAATAATTACTGACATCCTTGCTGGCACAT ATACATTTACACAAGGAGGAGTTCGAAGAAAATTCTTCAAACGTCCAACC TGTAAGCAACAATACTCCTTTTTATTTTACCTTTTACTTTGAAAAGATTT ACAGTAGGGGATAATTTGCACGTGAGCCATGTATTATAGGGAAGTCTTCT TTTCTAGAAATGATAATTGTATGAAAGTCTACTACAAATACTCTGTTTTC ACAATGTAATATTTTGCTACAGTATCAAAGGAGGATATGGAAAAACTGCG CCAGGCCTTGAAAACACTGTCAGAAGCTGAAAAACAGTTGAGGGTCTCTA ATGATAAGATGACCTGGCTTACAGCTGCTCTGCTTCAGCTTGCTCCTGAT AAACAATATATACTGCCGAGTTCATCCACAAGTACAAGCTTCCAGGGTCT GCCTACCTACCCTGAGGGATTCATAGCAAGGAACTCGACTACAGATAATA ACGACATATATGGCGGTCCCCATGGTTTATCAAGAGGATCTGAACGGGAA AATCAGCAGTACAGTACTTACCATGGTGGAAGGAGACCCAGGGAACATAC ACCAGATGGCTATAAGTTGTCAACAAGTGCTTCCAGAGTGAATGAAGGAT CTAAGTGTAGCAAAACTGACAATGAGCTTATTTGGCAAGCTGTTCTAGAG AGTGTTCAGTCAGATTCACTGAAAAAAATGATGGCTACAGAGGGACGGCT TATTTCTGTCAGCCTTGGCACAGGCAAGATTCCCCCTTATTCCATTTCTC TTTGTATTGTAGAATATGCCCGCGGAGAATTTAGTTCTTGTCATTGTTAA TTTTCTTACAACACATCTGAATCCAAAAGTAGAAGTAGTACTGCATATAT ACTATATAGGATAATCAAACAACAGATTGTAAGTGGCTTGCCTTGTTATG TTAGCACTGGTGATCAATTGTAATATATACTGGGCAAGTGTCCATTAGTT GGCCATTGTCCATTTGAGTTCATCTCCTTGTATATATTGCTTCTAGGCCA TTTTTCCATCTCTACTAGGTACGGAATATTTTGTGTTTGGCTTGACGAGC TCTTCACAATTGCTAGCAGGTTTAAAACTGTGTTTAAGTGATTCCAAAAT ACATAAAGAGAACTATAACTAACCAATTATTATATTTTGCTATTTGTAAG GGTACCGTTTCAATAATCTTAGTTCTTATATTTTGTTCTTTCCCTCCTGC AGCACCAACTGTACAGTTAATGTTCAGCTCCCGTGTGAATAAGTCCAAAG CTGAAAAGTCTAGGGGACAGATTGTGCAAGCATTTGAGTCTGTTCTTTCT TCTGCTACAATACTTGAAATCCGATATGAATCGAAAGAGGATGGGGGAGG TGTTCCAGCTATTTTACCTTACCATGAGGACACCTCTTCTAACATGGCTT TAAGGAGATCTTTCACGAAACACAGTTCAGTTTTCTCTGGAGGTGATAAT TTAGTTAGGAGGCTCCAGAAAGGTACTGTAGCCCAGGGTGCTAGCTCAAA TCAGACAAGGTGGATGCAATCTGATCCACACATATTGACTGAAGGTGAGA TTATTGAAGTGGGTCCTTCTAAAATGGAATGGTACAACGAACAAGATACT GGTGCTGTTACCTTTGATAAAAGAAGACAGAGTGTACGAGAAGCAGCAGC TTTGTCATCACAAGACCAAGAAATTATAGGTCCTCGAGGAGGAATAAATG TGAATAATGAACATGATCGACAAAAAAACATAGTAAGAGGTAAGGTATCT CTTGCTCATGTTATTAATAGGGCGGAAGGTTGTTCTCAACAAGGAGGCTG GTCAAGACAAAAAGCCATGTCAATAACAGAGAAGCTAGAGAAAGAGAATT TGTAAGTAATGCCATACTACAATCAACTACATTTCTTCAACTCTATTATG CTAGTTATTTTAACCTTCAGAATCGTATTCTTTATGAATAGATCATGGGG TCTATATCTCGTAATTTGATTCCACATTATTGAAATGTGAAAAGTTCTAT TTTTCTATTTGATTCCACATTATTGAAATGTGAAATGTTCTATTTTTCAA TTTGATTCCACATTATCTTGATTCCACATTATCTTGTAATTTGATTTTTT TTGGAATGTTTATCTATTTGCAGGAGATTGGAGCCTAGGTCGAGTCTGCT TTGCTGGAAAGCTTCAAGCACTACTAGACGGAAGGTAATGACCTGAGATC ACACAAACTGAAAAAACTTTAGCCCTAGGGTAGTCTATATACTTTCCACT CTCCAAAGTAACCAGTGCCTGGAGGAGGCATTTAAGACACATGCCGTGAT AGTTGCCCCTTGAAAAGTAGTCGTCTGCATACAACATGGAAAAATATTGC GGAAACTGTGTTTTGCACATGGTCACCAATGCTCATGATTTTAAAAGAAT TAAAAACTTGTACTTTTAGGTCTCCAATTTTTTTGAGAATAAATATATAA CTAGAGTACTAGACACATACATCTAGAATGTATGTCAGAAATTTCGTTTA AAAATATGTTGTATTTTGGGCTACACTAAAAAACAAATTTCTGACAAAAC ATATGTATTTGTAGGTCTTATTAATGTCAGAATTTGTTCTTTTCCTCTAG CCTAAAACAAAACGAGTTTTGTACTGAAATTTTGCACAAATATATGGACC ATGTACATGAGATTTATTTCAATATTCTTTAAAACTCAAAAATGCCATTT TTTATTTATTTTAAAACGGTAGGAGCACTGGTGCCCATGTGCACCAAATC TCCACTCAAAATATTGCCAGTAAATAAGTTTATAAATGTTCGGAAACACA TCAAGACTGGATAGCTTGAAACTTGTTGGTATGTCCCTATGGAACCAACT GTCTTTGAAGAGTTGTTCTCCTTAGGGATCACCTCCATATGGTTGACTCC CTGAAAATAGTACTAGTAGAATATATGCTTAAAAAAGATGAAATAGCTAA ATAAATAGTACTCCCTCCGTCTTAAAAAGGATGTCGCAAATTTGTCTAAA TTTGGATGTATCTATATACTAAATGTCTAGATACGTTCAAATTTTGACAA ATCTGCGACATCCTTTTTAGGACGAAGGGAGTAGTAGTAGCTTCAAGGGA GCGCCAAATAGAAACTATAAAGTTCTTGAAAGTATCATCTTCAGCATGGC ATCTTAGTTTAGTACTGACTGGAAAGTGGTTTTATGTCATGGTTTCCAAA CATCTCTTTTTGATCATATCATATCCCCCTTGCTGAGTGACATCGGGTCA TTTCGCTGCAGCTCTCAGCGTTGAAGATCAGAACCCGAAGATCGCGAGCT CTGTCAAGGCTCGTCCTGTGCGGGAGGTGCATTTCGGTGAAGTCTCCCAA GTCGACACGCTGACGCGGAGGTCCCACCGGATTTACATGTAGCTAACTCC CATCTCCATGGTTTATTTTCTGTAACTGTAGCAATCAGTAAGAATGTAGG TTATTCTGTAAATCGTTTAACATGTAGTAGTCCTAGAAGAATGAAAGGAA TTCCTTCATGTCCATTATTTTCCCTGAAAAATATTTGAATGCCAACAACA ACGCAGGGCGCACCTGCATGCTACTACTAACATTGGGCACAGAGAATTGA AAAGCATGTTTAGACCCGGAAAATATATGGGAGCGCACTTGCATTTAGGA TTGTCTTTAGGTAATTATGGGAGACCCGGAAAATTGAAAGCATGTTTAGA CCTGCTTCATTATTCTGTAATCTGGTAATCTCTCTTGGTTCTTTTTGTCG AATTGAGGTTTTACATCATCCGGTGCTGAGTACAACTAGTCAGAACCACA AACTGATCCATGCAGCAGCCATAAGCCCATAAAGCTACACAGACCAACCA AAAGACATAGGATGTTCTTGCTGGTCTCTAGCCTTGGCGACCACCGAAGA ACTCAGGTGTCACACTGGACAGTCGATGCTCTGCTGCAGGTATCCTTCAT CTTTTAGCATGCCAGCCCAGCAAGTCATTCAACGAGAAAATTTGAGCTGT CACAATATTTGGATCACGGAGGCAAACATGCTGCATTTTTCATTTCGGAT CTTCCGTTCCTCCTGCCTTGGTGTCTAAGCTTCAGATGGACATTTGAGTG ACAAATCGTGGTTATGTACTCACATTTCGTGTCATCTAGGCCTAAGGTGT TCGGGGCTCCACTCAGTTCGTATTAAAAGTCTACTCAAGCAAAACGTTTT AACTTCTATACAACTGTTCATATACCATTCATGCGTAGAAAAATAAAGCT CGGCTCAGCGAGATTCCCGTAACCTGGCGTGGTGTTGCGAGCGAGGAGAA GGAGGAGGAGCACACATATATATGTCTTCTCTTTTCAAGCTCGTACAAGT GGTGAAAGAGCTCTTCTTATAAGCTAATCTAACTTCCACTCAACTAGTAA TATGAGACTAAACATTTGTCCCACAAGAATAGGCAAATAGACCTCTAAAA TTTTAAAAATTTATTGGCATATAATAAATAGGCTGGATCTATTTAGGCAA AAATTCTAACACTAGGCCTAAGGTGTTCGGGACTCTGTCTTGGATCTTTA GCAGGCTATAGGCCACCCGGTATGCTAGCTGGCACTACCACTAGTGGGTC ACCCTGACTTGCTAGAACGAATGCCACGGAATCTGTGCTTACTCATTACC TTTCCAATCCCTTTGAATAAGGACATCCTTAGCTCGATACTTTATAAAAA GCACAACTTCCTATGTATTCATTTGATGGAAAGCACGAACTTTATTACAG ATCGCAGCTGTGAAGATTGCCTTTTACAACATTAGTGATATGAGTTAGTG TTAGACTGTATATTTGTAACACAATTGTAACTATATCTGTATTGTATTCT TTGGTACCCATATATATGTGATAGGCCACGCACCAGATGCGTTGAGCCAG TTTTCACCAAACCACTGTTTAACATGGTATCAGACTAGGTTTCGAAACCC TAGCCGCCGCCCCCTGCCCTTGGCCGCCGCCGCCTCTCTCGGTCGCGTCG CCATCGCCAAGATCGCCACCATGAGATCCTCCGGCTCTTTCTCGGCCTCT TCCGCTGCCTTGCCCGGCTCCTCGCCGTCCCCTGCCATGATTCCCCCGCA GCTCGCGGCGATCCTCGCCGCCAGCACCACAAGCCAGATGGCTTCGTCCT CAACCTCGCGCCCCCTGTACCTCGGCGCCTCGCAGTTCGCCCCCGGGTTC TTCCCGCCACCGCCGTCCTATGTGTCGGCGCCGCCGGTGCCGTTTAGTGC GGTACCGCCCCTGCCCCCATCGGTGCCCTCGGCCTCGCCGTCGATCGGCC TCTCCTCGGCTGCGGTTGAGGTTGCAACGCAGCCCCTCGTCTCCACCGTG GCCGATGTCGCCGCCCCCGCTGGATCCCCGGTCGCCGACGGCCCGGGCAC TTGTCCCTACCAGCTCACGCACCTCATCACGGTGCGCCTCTCGCAGGATA ACTTCCTGTATTAGCGGGCGCAGATCCTCCCCTCCTCCGCAGTCGTCACC TCGAGGGATTCGTCGATGGGAGCCACCCGTGCCCGCCCCGCTACGTCTCC GCCGTCACGGCCACCGGCGCCCGGGTCTCGGCTGAGAACCCGGCGTACCA CACCTAGGTTGCGCAGGACCAGGCCATCCTTTCTGCGCTCCAGTCGTCGC TGACCGAAGGTGTTGCTGGCTTAGTCGTCTTTGCTGCCACGTCTCACGAC GTCTGGGCGACGATGGCGGACAGCTTCTCCGCCAACTCCTCGGCTCGTGC GTCGGCCCTTCGCCAAGAACTCCTCGAGTGCAAAAAGCTCGACTCCTCGG CACACGTCTACTTCAACAAGATCAAGACAATTGCCGACACTCTGTCCGCC ATCGGGCAGCCGCTTCGCAATGAGGAGTTCACGAACTTTGTTCTCCGCGG CCTCGACTACGACTACGACAACCTGGTTGAGGCGGTCCGGGGCCGTGACA CGCCCATGTCCCCACAGGACCTGTACTCGCGCCTCCTCTTCACCGAGCAG CGCGTCGCCGCCCGTCACGCTGAGCTGCAGGGCGACCCCCACGCCAACGC GGCCTACCATGGGGCCGCTCCTGGTGGCTCCAAACAGCCGCGCCCCCCTG CTGGCCCGCCCACGGGAGGTGGTGGTCGCCGGCCTCCTCCGTCGCTGCAG CCCCGTGGTCCTCCTGTGTCCACCGATCGCCGCGGCCACCCCAATGTCGA CTGCCAGCTCTGTGGCATCCATGGGCACTACGCCTCTTGTTGTCACCGTC GCTTCAAGAAGGACTTTCTTGGCATCGGCAACGACGGGCGCGGCAACGAG AAACAAGCCGCCATCGCCGAGTAGAGTGGCTACTCCGGCGGTGGCTACTC CGGTGGAGGAGGGTACACCCCGTCGTACCCGATCGACCCCACCTGGTACT TCGACACGGGTGCCACGGAGCACATGACCAACGCGGCTGGTCGTCTCCAG GCGCAGGAGCCCTACCACGGCCACGACCACGTCCGCACGGCTGACGGCTC AGGTATGCCCATCACTCATGTTGGTCAGGCCTCCCTTCTGTCTAGTTCAT CTCGTCGGCTTCGCCTTCGTAATGTTCTTCGCGTCCCACTTGTCATCGTC CTTTACTATCTGTTCGTAAGTTTACTCGTGATAATGACGTGTTTTGTGAA TTTCACCCGTCTCATCTCCTTGTTAAGGATCGGGTCACACGGGAGGTTCT GCTTAGAGGTCGCATACATCAAGGCCTGTATGTGTTGGAGGCGCCGTCTC CTCCGGAGGTCTTCAACGATGTTCGCACGTCGGCGTCCCATTGGCATGCT CGGCTTGGTCATCCTGCGTCTCCCATAGTCAGCCATGTTTTGCATCGACA TGAGCTCCCTACTTCGTCTAGTAATAAAAGTTTAGCCGTTTGTGATGCAT GTAACAAGGAAAGAGTCATCAATTACCGTTTGTGTCTTCCTCTCGAGTTG TTACTACACCTTTAGAGCTTGTGTTTTCAGATGTATGGGGCCCTGCCCAA ACCTCTGTCAGTGGTCATAAATTTTATGTCAGTTTCATTGATGCCTATAG TCGCTTTACGTGGCTTTATCTCCTCAAAAGCAAAGCTGATGTGTTTAATG TGTTCTTACAATTTCAATTGCATGTTGAGAGACTCCTAAAGAATAAAATC ATTCATGTTCAATCGGATTGGGGGGTGAATACCGCAACCTTAATTCTTTC TTTAATAAGCTTGGGATATCTCATCGTGTATCATGCCCACACACACATCA GCAAAACGGTGCTGTCGAACGCAAGCACCGACACATAGTTGAAACTGGCC TTACACTTCTTGCTCATGCCTCCGTGCCTTTTCGGTTTTGGAGTGATGCT TTTACCACTGCTTGTTTCTTGATTAATCGTACTCCCACTCGAGTGTTAAA AATGAAGACACCGCATGAACTGTTGTTTAATGAACTCCCTGACTACACTT TCTTTAAAGTTTTTGGCTGTGCTTGTTGGCCGCATCTTCGCCCCTACAAC AGTCGTAAGCTTGAGTTTCGCTCCAAAAAGTGTGTCTTCCTTGGGTATTG TGCTCTTCACAAAGGGTACAAGTGTCTCCATGTTCCAACTAATAGAGTAT ATATTTCTCGTGATGTCGTGTTTAACGAAACTTTGTTTCCTTTTTCGAAT ATGCCATCCTCTCCGTCGTTGTCTACCTCCACTCATAACTCCATTATCTC GCCTGACCAACTTGAGGATGTTGCATTTTCGCCTGTGTTATTGCCTAACC ACGGTGCAGGTACCGGACGTGGCGCTCGCCTCGAGCTCCTTCATGAACCT GAGTCGCCAGGACCTGCTCCTCCTGACTGCGACGTCGATCGTTGCATGGA TCATGCAGCGGACACGCACCCCGAGGCCGCCTCTCCGGCTCTGTCTGGCC TAGCTGCTCCGCCGCCTGCGCGGATGGCTGGCCGCGGGCCACCTTCGCCT CCTGTGCCGCCCGCGCGGTCTTCACCGCGCGCGTCGCCACCGCCCGCCTC TATTGGTTCGGCGTCACCACCGCCTGGGTCGCCCCCGCCTGCCTCACCTG GGCCGGCCCCTTCCCCGACCGCGTCGCCAACGCCTCCTGGGCTGGCCTCG CCACCGTCCGTGCCTCCGCCTGGGAGCTCGTCTCCTGCAGCATCGCCCCC CTCTACCGATGA

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.