Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA039644

[Submit comment/correction]

Sequence	AA039644
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA039644
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	ATGGGGACGGCCTCCCCTCTCGGCTGCGGGGGCGGCCTAGGTGGGGTGCG AGCTCCGATGGTGGCCATGGGGTGCGAGCTCGCGCGTTATGCCAGCGATG TCGGGGTGTATGCATGGTCCTTCTCGGGTTGCAGGTGTGTCCGCTGGTAA CGACGGCACGTCGTCCCTCTCTTCGGCGATGCGATGTGTCGTTGGTCGTC GGAGTGGTGGCTAGAGTTCGCGGATGTCGGTGGCGGCCTTAGAAGGTGGA CTGCGCGGGCAGCTCTTTGGCGAGCGTCGTGGCTTCTCCCCTCGGTCTGG GGCCTATCTTGGGGACATCCCCTCCACATTGTATCTGTTCTGCCAAGTTG TTTGCCGTCGCTATAATGTTTGCCTCGGCCTCCTCTTTCGAACAATGCCC GTTTTAGGTAGGCCGCATCACGCTACCTCGCGCGCCCTAGGTCGCTCCAA CGCCGCCAGCCTCCGGTCAGCCACTATAGCTAGCCCCTCTCATATGCATC CGGGATTTCTCCGAATTAGGGTTTGGACCCCTCGGAACTCGTTTAAAATG ATCAAGCATCCTTAGGGTTTTAATTTCATTTGTGTATTTATTTGTGTATT TTTGTATGAATAATATGTATATTTGTGTATGAATCCAAGTCCACTTGAAT GTTTACTCTCTTACTCTAGATAATATTATTGTTTTAGAAACTATGGATCC ACTTAGTAGAAACCTTGAAGAATAAGAAATAATGGAGAACATTATTGATG AGGACACCTCACAATATCTGAACTTGGAGGGACATGATGACAGCTCAAGT AGTCATGGAGAAGATGAAGACTCCGGTGAACGCAATTTAGTGATTACAAA GTCTGGCGAGGTATATGCATTGATTAAGCCTCTGCTGACTTCCACCAACA ATCTTCTTCTACATGTATTAATTAACGCTTCTTTCTTCTTTTAGCCCTCT GGATCGACCAACCAGCAACCATCTTCTTCTACGAAAAAGAGCAAGCGAGG CGCGAGCCATCGGTTGAAAGATCGTGCAAAGTTCATGATCAAAGCAGTAC GTGTTGATGGCAGGCCGATGGAGCCCAAGAAGGCCGCAGACAAATTTGTA TGTCAGGCTGGAGTTCTTGTTAGGGACCAAATTCCAATCATAATTGAATA TTGGAATAAGCCAAAAAGGGCGACAGTTCCTTTGTCGATGAAAGATCCAA AGAAACGCTTTGGAATTCGTTGTTGGTAAATTTCACCCTTCCGCCAGAGG AGGATGAAAATAACCCGGTTATAAAGGAAAAGGTCAAAGAGTGGACTCTA AAGAAGATGGCTGACGCTTTCCGCAACTGGAAGACAAAATTTAACAAATT TGTCAAAGCTGGCGAGACTCCAAATTTCGAAGACGCATATTATGCGAAGA TAAGACCTCACTGGCCCGAATTTGTGACATATAAAAAAGGTGCTATAGCT AAAAAGAGGACAGAAACCAATACGCTTAATGCCCAGAAGAAGGAATATCA CCAGAGGACGGGGTCAGGTGGCTACATATCTCAGAGGCCTAAGTGGGAGG AAGTTGAGAAGGCCCTGCGCGCTAGAGGGATCACACCCCAGACAGATGCG TGGGACCTACGTGCAAAGACTTGGTTCTACGGAATCGGGGCAAGGTTGGA CCCAGAAACATGATTGTGTATCTTCCCAATCCTCCTTGCCAAACCAGTCA CTGAACTCATCACAGCATATGAGGAAACATCCGCCAGGACCTTCCATACC GACAGAGATAATGACCAGCTCACACGCGCCATCGGTAAAAAAGAACACCC TGGACATGCACGAGGCACAGGGGGTATGACGTGGAAGGATGGGTTTGCCG AGTGGAGCGACTCTTACAGATGGCGTGGCAGAAAAGAAAAAGAGCATACA GAGCGGATGGCACAGATAGAACATGCACTTGTGGCACTGCAGGCGCAAGT GAATGCACAACAAAGCCATCAAGCTACCGGCCCATCTCAGCGGCACGAAG AGCCTGCATTTGAAGCTGCCGGCGGCCCAGACTCTGCGCGGAAAAGCAGC GTGGCTTCCACGGAGAACGTGCAGCCCACGCTTGAAATGGCGGGTCCTCG ATACCCCGTGGATGAGATCACGGAGAGCGAACACGCTGAGCTGCATGTGA GATTAATGGGCTTATCCATTAAGGTGGTTGTCGGCTATGCCTTACCTCCT GTAGCTGGTGGAACTTACCACTGCCGACCGATTCCAGATGGCTATGCTAT TGTCGGGGTGGATGAGGTTGTGAAGGAATATAAGGAAGCACAGCTTGACC ATGCTATAGGTGAAGGGGAAACTCAACTCAAATTTGCAGTGAAAACAACC ATTCTTTGGAAGAAGAACACATCGTGCTTCCAAATTGGAGGCCACTGGCA CCCCCGCCGTCTCCACAGCGTCAGCAGTCTGAGCCGCTTCAGCTATCTCC TGCGCGGCAGCCATCTCCGGCGCTTCAGCCATCTCCTGGGCGGCAGCCAT CTCCGGCGCGTCAGCCATCTCCTGCCCGTCAGCCATCTCTGGTGCCTCAG CCATCTCCTCAGCGTAAGCGGAAGAGCACTGCCACGAAGAGCATCACTAG CACTGCCACAAAGAAATCCGCAGGAAACCGTATGCCAAAGAGTTCAAAAA ACTACGTCCCGCAGCCTTCCGCCAAGCCATTGCCGGTTTTACCGTGGAAT CGCAGCGACGAGGAGACCAATAGGATCTCGGAAGAAGAGGTCAAGAAATT CTTTGCACCTAGACGGGCCGAGCCAAAGGAGAAAATAGATCCGGCGGTGG TGGAGAAGTTTTACAATAATATTTTGAAACCTGAAACCCCACTTGTGCCG GACTACGAGCGCCAGATTTTGAAGGGGGATGCAAGGCGCCGTAGGGAGAC TGAAAGTAGCAGTCGTGCGGCACCCCAGAAAACAGTTCCCATGCTCGGAG AGCAAGAAAACCAATCATGCGCCCCGCTCCAAGTGTTCGACACACGGGAC GCTCCTCCCGTAAATGATTACGAGGCAGAGCTACAAAGAAAGGCCAATGA GATGGGGATGACTTACATTGCATACTTGAACATCATGGGAGACAACTTGC CCAAATGCGATGCCAACCCCATACAACCATGGAAGTATGGGAAGAATCTC GTCAAGAAAGAGGAGCTCAAGAATCTACCAACAAAGATGCAAAGATTGCA CAAGTGGTACCTTGATTTCTGCAAGACGAGAAATGAAGAATGGATCACGG CGCATATAAGAGATCAGATTTTCTTGTGCGGAGACGACGCGATCGACTTC AACATTCAAGACTTGCATTTTCTATTCAATCAGAAGGAACTCGACAAAGC TGTCATCAGCCTTTATTGTGTGTAAGTACTATTTCTGTAATTTATATCTC ATCTCATTCACTTCATTACATGTATATATATATGCTCACCATATATGTAT ATACTATTATGCAGGAAAAATGTTATGAAATGCATGAAAGGAGGCCCTTT TGATATTGGGTTCGTTGACCCAAATAGAGTTCATGAAGAAGTGGTAAGAA CCAAATCCGGACAAACAGAAGATTACTTGCTAAGGTCTTTACTGAGAAAA CAAACCAAAAGGGAAATACTATTGCCTTACAACTTCTCGTGAGTACTGTT ACCCTCTCTCTTGTACACATTCTGTTTCAGCTTACTCGATGTTAAGTGTA ACTGATGATGAGTTATGCGTGCGTAGGTTTCACTTTATTCTACTAGTCAT TCAACCCGACTCAGGAAAAGTCCTTGTCATCGACTCGTTACGAAAAGAAA AAAAGATATGGGCAGACTTTAGAGAGATGCTCCAGAGGTAATTTCAATCA TATTATCGCACTAGATCGGCAACTTTCGTGACAACAAGTAATTAGTTACT CCTTTATCCATGTTCTTTGCCGGACAGGGTTTGGAAAAGGTTCACGGGCA GGGCCGTGGGTGAATGGTCAGAAGAACTAAAATTTGTAGACCAAAATGTA AGTAATACTAGCTAGCTAGGTCTCCGTATCTCTTTGATTCTGCTTCCAAT TCCATTATATCATGCTTTATTGATTATTATTTTGATTGAACTCTCTATTC TCGTAAAGTGCGCGCATCAGGGACCCGGCAATAACTTATGTGGATACTAT GTTTGCGAGTTCATTTGCAACACGATATGTGCGACGGGCCAAGACGCACT AGAACAACTTAGAGTAAGTAAACAAAGTCCACAACATTATTTTATTACCA TCAATTGTGTTGAGTTTTATTCTTATATATATTGACCCCATTCTTCATAT ATATTCAGATCGAACGGATGCGGGACCAACTCCTACCATTTGACCGCATA CGAGCCATTCAAGAGGAACTGGCGGGGTTCATACTTGATGAGGTCGTCAC GCCTTGCGGAGAACTCTTTAGATATCCACCAAAATAAACGTTGACGATGT ATGTGCCGATGACGATGTTTGTGTATAAAAATAGTTGCTTAATTATTCAT GTACTCGTATGTACCGATGACGATGTATGTGTATACCGCTCCCGATCGAT TCCCCCCCCCCCCCCCCTCCGGCAGAACGCCCAGAACGGGGCAGATGCAG AACTCTGCCGCGACAGAGATTTATGCCGTTTTCTTGCCGCGGCAGAGAAC CTTTAACATCGGTTCGTGTTACGAACCGGTGTTAAAAGGGGGAGAGGCCG AGCCCTGCGGCAGCCCCACGTGCGCCACCCTTTAACACCGGTTCGTATAA GAACCGGTGTTAAAGGGGCCCCCCTCTAACACCGAACCCTCAATAGCGGT TCTACAACCGCTGTTAGAGGGCCCTCCCAACCGGTGTTAGAGGGGGGAGT CTGCACTAGTGGCCTGCAAACCATATTCTATTCTCGATTTGCCGCGATAT TTTCTTGGGATGGTTTAACAAACTTCATGCAGTTCGTTCAGATCGGAAAG GAAAAGAAACTTTGTGCATGCAAAGGACGCCTGGGACTATATATAGCAGC AGTTAGTTATCTAACCCCAGAAGCTAAGCTAGATGCTACATATTGCTTTT ATCTAACGTTTATTATGGCAATCTTAGGAATGGACGGGTCTATGGATGAA CAAACCGCATGCATGTCCACCTTATTAGGAGAATCTTCAACCGTTTCCCA TGTGTTGTGCCCAAACTAAGACGCAACTGCTCGAGGATTGGGTTTTGAGC TAAATATAACAGAAAGCAAGTCGGTGTAATGGCTACTTGCGTTCCTGTGG CATAAAAGTAGTAGCATGTATTCTTTAAAAAAAAAGTTAGCCGTTAGCCG TCTATGCCGATGGCTAAGCTGTCGGCGTAGACGCTATTCCGACGGTTTTT CTATGCTAACGGGAAACGAGCATATGCCGACGGGGCTATGCCGACGGTTG CCGTGGCATAGCTCTACGCCGACGATAATCTGGCCTATGCCGACGGTTTC TGGCAAGCCCTCGGCGTATCGTCCTTTTCATGTAGTGATTTGAGTCTGAA TTTTAAACTCCAGACTTCTGCACATGTACCGCAGTTAATATGTGGTTTGA TCCAACTGTCAAAAATCAGCAACATGTTGTTTGATCCACAGGTACAGCTA TCATCTTGTTTTTTTTCAATCAAAAGGAAATTAACATGCTACACATGAAA TTGATTTTGTGTGTGAATTTGCTTATGCTAATCTGAATTTACATCTTAAA ACAAGCCTACTCCCTCCGGCCCATATTAATTGACTCAAAATTTTCTAGAT TTGAATGAGTCTAGACACTATTTAGTATATAGGTTTATTCAAATTTTGAC AAATCAAAGTCAATTAATATGGGCCAGAGGGAGTATTAGAATTATATATT TGCTCAAACTCAGCATCTATTAAGAAGCACATATTTTTTACCTATCATTT CCTATAAACGTTCTACCTATCATTACGTATGCGTGCATAGTGAAGCATGA AGCCTGGATAATAATAGAGTAAGACCGAACAGTTTTATAAAGGACACGAA TCACCATGAATTTCAGAGGAAAATTGTCATGTACTTAGATTTGACATCTT GATAGAAAATTCATTCATAACACAGATTTTTGTGCATTTCTGAAATTCTG CAAGTGGCATAAAATTAGATTTTTATGTAAAATATTGAAGTATGATTAGT AGCATTTGCACGGTAGGTGCCAGTGCTATATCCAAGCCAGCGTCGCACCT ATTCTGTTAGCTTCTATATATACTCCACCCCTATAACTCTACTTGCATAT ACGCTCTGGAATCAGCAGAGAGCCAAGAATGCCAATGTATCCCCTTCACG TCGTCTATGTTGTTGTTGTTCTTCTTCTTCTTTCTTCGCCATTTAGTCTA GTTCTTCTCTGTGCATCTGATGACTGCCTTGTCCCTGGCAAGCCGCTCTC CCCTGGTAGTGTTCTTGTCTCCAAAGATGGAGTATTCGCTCTAGGATTTT TCTCCCCATCAAACTCCACCAAAAATCATTCCTATGTGGGCATATGGTAC AACAACATCCCAGAGTTCACCGTTGTATGGGTCTCCAACCGTGCTGCACC CATCACGGATCTTTCCTCTGCAGATCTTTCCGTCACCAGCAGCTCCGACC TAGTCCTGTCTGAGAGCAATGGTCGTCATGTTCTTTGGACCACGAACAAC GGCGGCATCAATTCCACCATCTCGGCGGCAGAAGCCACGCTGGACTGCAG TGGAAACTTCATCCTTCGGTCATTGGATGATAGTACCATAATATGGCAGA GCTTCGACCACCCAACCGACACTCTCCTACCTGGCATGAATCTCAGGATC AGCCACAAGATGCACCCACAACAGCAGCTTGTTTCTTGGAAAAGCCTACA TGACCCATCCCCTGGTGACTTCTCCTACAGTGCAGACCCCGACAACTTCC TGCAGAGCTTCATCTGGCATGGCTCAAGGCCACACCGGCGGATCCCAGTG TGGACAAACTACCTCTTTCGTATGAGCTACATGGACAGATTAAATTCTAC CATTTACATGGCACTGCACCATGCAGGCGACGAGGTGTACATGTCGTTCG GCATGCCCGCTGGCTCCTTTGTTGCGCTGGTCAGGATGGAGATTGACTAT TTAGGGAAGGTAAATATATTAACGTGGGAGAACAGCACGTCAGTGTGGAA AGTCTTGTACACACCGCCTGAGCATGTGTGCAATACATACAACTACTGTG GTCCTTATGGTTATTGTGACAACACTGAAATAGTCCCAGTTTGCAAGTGC TTTCATGGTTTCAAGCCTAGGGATGATAAAGGCTGGATCTCCGGTAGGTT CTCGCAGGGATGCCTCAGGAAGGAGATGCTCAGGTGTACTCATGGAGATG GTTTCTCGACTTTTACGGGCATGAAGGTCCCTGACAAGTTCCTCCACATC CCGGGCAGAAGTTTTGACGAGTGCGCGGAGGAGTGCGTCAACAATTGCTC ATGTGCGGCATATGCTTACTCCAGGATGAGCAACATGTATATTGATGGAG ATGAGACAAGGTGCCTTGTATGGATGGGGGATTTGATTGACATGGAGAAC TCCACACATGGAGGGGAGAACCTCTTTGTTCGGACAAACATAGTAAGAGG TATCATTCCTTGCTTCTTTTTGCCTCGTTACTTATAAAGAGGGGCTTATT GAAGTTTCTTCCTACTCTACAATAATTACTCCCTACCATGGATGTGGTGA TTGGCATCGGTAAAATTCGTTGATCCCCCTGAATTAAATTTTTGCAGGTA GCAAGAGAATGATCAGCCCCCTAAAAATCATGTTACCAACTATCTCAGGT TTGCTCATGCTAATATGCATGTGGCTTATTTGGATTTGTGGTTGTAGAGG TACATAATTATTGCTCTTGTGCTAAGCTTTTTATCCTCGCTAGTCCTAAG AAACTGAACAGACGGTGCCCCCATTCATGACAGGCAGTCAAGGGAGCAAG AATATATGGAGAAGGATGACTCTTGGAGATACAGACTCTTTTAATGAACT TGCTGATAGGGTCACAAAATTTCCCATTATGAGCTTCAGAGAAATTGCTT CCGCCACAAATAATTTCTCCGAGTCCGGCATTCTTGGTAAAGGAGGATTT GGCAATGTTTATAAGGTAAGAATGCTCTATACTTATAACTTAATTAGTAA TGGATATGTATCTTGTCTGATTCACTAGTACCTCATTTTCCAGGGAATGT TGGTAGATGGTACAGAAATTGCTGTGAAAAGGCTCCGTGCAGGTTCTTCC CAAGGTGTACTGGAGTTCAAAAATGAAATAGATCTTACTGCTAAGTTGCA GCATAGAAACCTGGTCAAACTTATAGGCTGGTGCATTCATAAAGATGAAA ACCTTCTCATTTATGAATACCTACCTAACAAAAGTCTAGATGCCTTCATT TTCAGTAGGTTCCAGTCATTTCTTGCAAGCAAGCAACTTTTTGTCAAACG AATATGCATCACTAATAAGATACTCCTTGTGATTTTATCCTTGATAGATG ATACAAGAAAATCACTGCTCAACTGGCCCATAAGATTTCAGATAATCAGA GGTGTAGCCAGAGGCCTTCTTTATCTACACCAAGATTCCAGATTAATGAT GATTCATAGAGATCTCAAACCAAGCAATGTATTGTTGGATGCTGAAATGA TCCCTAAGATATCTGATTTTGGTACAGCTAGGATCTTTGGTGCCAATGAA AAACAAGAATATACCAGCCGAGTTGTGGGAACATTGTGAGTAATTTCATC ATACAGTACATGAAACAAACCAGAGGCCGGGTGTAATCTTTACTTTAATA AGTAACAAATCGCCCTTTTCCAAAAAAAAATATTAAACAAACAAGATATG TATTCTCCTTTCTTTAATTGTTTTAAGCTTACATTTTGTGCTATCCAAAC CAGTGGCTACATGTCGCCTGAATATGCACTGGAAGGCACCATCTCTATCA AATCCGATGTGTACAGTTTTGGTGTATTACTCCTAGAGATTGTGAGTGGA TTGAAGATTGGCACTACAGGCCTGGCACCACGCTCACATAACCTTATAGA TTATGTAAGTGTTTTCAAGTGCTCAATACTTTTTCGACACATAAGAGATG CAATCTTGATAACGACATGATTTTATTTGATGCAGGCGTGGAACCTATGG AAGGATGGGAACATGATGAATCTAGTCGACCCATCAATAGTTGATGGTTG CTCTGCTGACGAAGCTCGGCGATGCATCGGTATCGGACTCTTGTTAGTGC AGGACAACCCAGAGGCTCGACCCCTCATGTCTTGGGTGGTTTCCAGCCTG GATAACAAAGTCCTACAGCTCCCACAGCCAAGTGAGCCTTTATGCTCTGC ATACCGTAATCGCGTAACTAATGGAGCAGGGGAAAGCCAAGTAAATGATA TGAGCCTTCTAAATCTGCACGGCCGCTAGGAATCGAATTGTATATATGTG ATTGAAACGGCATGTTCTCTTATCTTGGTATAAGCTGTGGCTGGGGCCCG ACAACGGTACCACCTGAACGAAGACAATAGTGAGCATATATTTCTTGTAA GGAATCTCTTTGTTGAATGCTTGTCTTGTACACTTCATGTTCTTCTCTAG AATGGGCGAGCTCTGTCACCATCGGTATTGTAATCTGTTTCACCGTCATT ATTGTAATTGTGCTTGTATCATGTATCACGTTTATTCTCATTCCATATCG TTG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.