Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA020401

[Submit comment/correction]

Sequence	AA020401
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA020401
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	ATGCCTGAATTTTGGTGCGCCGGATCTCTCAATCTCTCCTGCATTTCGGA TCTTAATTGTGCTTCGGCTCTTCCGCCGCGCCCTTTGCACGCCGCGCCGG GGGGTTTCCTTCCCCTCCACCTCGCGCCGCCGGTCGCCCTCGTCGTCTTC TGGTGGCTCTAGAGGATCCGGCTTCCTTTCGAGCTGTTCGCTGGCCGCGG AGACGACCACCTCCCCGCGATTCTGGAGGAGCAGCCGCCCCGCGCCTGGA CCCTGCTTGACGCGGACCGGGTGGGGGACGCCGCCGCCGCCGTCCGGGGC GTCCTGGAGAAAAGCATCCGTCCAACACCCCTCAGTCCCGGGGGGTCACC CCGCGCCAGCACCGACGGATACTTCCGGTACCCGCAAATCAAGTACTATC TTGAAGTCGAAGCGGTTCGAGGAGTCCGTCTGTTCGACTCCAAGGCCATG GAGGAAATGGCGCGGGGCTTGCCTTACGCCGTCGAAATGCTCAGGCAAGC CTCCATCCAGTACGACGACACTATCCGCAGGTAACATTTTACCCTCTTTG TCTCTTTATTTCTTTCTGTTTCAAGTACCCGACAGAACGTACTGAACTTT CGCCCTATCATCATCACTGCTTTCAAAGATTGTCCTGGTCAGCAGCATAC ACTGTCTCTGTTGATCTGTTAGCTTTAGTTTGGAAATATTCTCGATTCGC CTTTCCATTTTCGTTGCGAGTTTAACAACAATGCTACTGATGCCTTACTG TCTTCAATCACTGAAACGTTCAACATATTTACTTGATCAATGGGATTGAG CAATGAGTTTCTTTTTGAAGGTAGTACAAGTATTCATCCCGGCCCAAGAT GTAAACCTCCAGTGGTTTAGCACGGAGGTACAGCCATAAGCTGTTGCAAA GTTTCAGCCAAGTGCTGGAATAAAAAAGTTCAGTAATAAAACCTTAAATA AGCTTGAAACATAAAGCTAGAGCTGCACATATGCTTTGCAGCAGTGGGTT GCCGAACAGCTCTTCGTTTTATCCACACACTCACACACACTGTATGTTTG GCTGTTAAATTTTGTTCCATTGATGAAATGGTAAATGGGTACCAACGTCC AATCCAATGACCAATCGTTTAGTCCAAAATGTTGCATTCAGACGCCATAT GGCCTTCATGTTGCACCATTTGATAGCCGATGTCATTTTTCTTGATGATA TATCATGCGATGTGTAGTTTCTATATCTGTACGTCGGGTGTGCCTAGTCC AGTCCACTTCAGCGCACACTGATGCCACGCATGTCGCGGGAATTTTGCAG AACATGGTGCTAAAATAAAAGCTGAAAAATCTACTAAATTACTGGAACAA ACACATATGCAACAATTAACTTTAGCAAGAAAAGTATTTTGAACTTAATT AACTTTAGCTTTGCCATGGTGGCTCTGGTATATAACAAGTGATATCCACT TTCGTACAATTTGTACTTATCACATAAGCATTCAATTCTCTAGTCTAGAG CCACACGTGGACTGTAATACTACCTCCATTCCGGTTTATAAGGCAAATCC GTATTTCGAGAAAATAGTTTGACAGTAAATTTGGTCAACAAAATATAAAT TATATTTAACAAAAATTATACCATTAGATTCGTATTCAAAATACGCTTTC GATGGTATAATTTTTGTGACATATGATTTATATATTATTGACCAAATTTA CGGTCAAACTATTTTCTCGAAGTAGGTCTTAGCCCTATAATCCTGAATGG AGGGAGTACATCCATGTCCAACGCTGAAAGTGAGTTTCTAATAGGATCAA TCAGATACTGATTACTTTTATGTTGTGCGTGCATAATAAAATGAACTAAA ATTAAGACTCACTTGTTCTTCGAATCACAGCAATATGTGTGAGCAATTGA ACATCAATAGTAAGCCATTGGCTTAGGTATGTACATTAAATAGTGCTGAA ATGTATGAGTGCCCCATAGACTGAGATTTAGCACGGGAGAAAGTATATCT TTGAGAAAAAAAGATGGCAAAGTATGCCGTATGATAGATTAAAAATACTA AGATTTTCTTACCAATCTCATTTTCTTACCAGTCACATCTTCTTGCCAAT ATCATACTGGATTATTAGGTGTGTGAGACAATTTTCTCAGTTGACAGCTG ACGAGTTGACCACAATTGCACAGAACACCCATCTTGGAAGATGGGAGTAC AGATCTTCCTACAAAAATCAACAACACTACATGGTCCATATACATACATA TATGGGATAAGAATAGATAAGAGTCGACAAAAACAGCGGCGGACAGCATG GGTGGAGAGGCAGAGAATGTGTGTTCAGCGACCAATTACAGGAGGTGTTG CTAGTTAGACTTGGTCGAAGTGCACTGCCTGGTGCGTGCTAACTTATCTT TTTTAGCAAAGATTACTTGATTGCTATAGATCACGTCAAGTCCTAGCAGA AGACACAAAGGTGGAAGATGTAGCCATGCCCGCGCTTGATTTCTCCATTT AATAGAAAGCAAACACCTAGTGATATAGAATTTGTTGGTTTTTGGGGACA ATTTCTGGATGGGCTTAGTCCCTTGGACCTCCACACCCTCTTATATATAG CACAATCTAGCCTTACATCTTCACTCGTACACTGGAATGATCTAGACTCT AGTAGGACATTACTACTATACTAACACTCCCTAGAATACTCTAGACTCTA CAAGAGTAGTACTACCTACACTAACTCAGACTCCAACACTCACTGGAATA CTCTAGACTCTCCTAGGACAATACTACTATGCTAACCTAGACTCCAACAC TCCCCCTCAAGATGAGCATGGGTCAGTCACCATGACCATCTTGCTACAAC TCCATGACACTTACTAGGACCACTACACCTCTAGCTTGCAAGCATAAAAA TCTACATGAGAGCGTTTTACTCTAGCTCTTGCTCTAGTGGTCGTCAAGCA ACCAATCAACTCCGACCATCCAGCTCCGCTCATGGGAGCCATCACCATCA CCGGATACCTACTCTGCATCAAGCTAGCCTCCTCCCATCCTTCTTGTGTT GGTCCACCGTTGCCTCTCCAACCATGCACCTTCTCACACCGGTGCGTACA ACGGTGGCACCACACGCCTTCCCTCATCAGCTTGAGCATCATCATTGTCT CTTCATTAACTTTGGTTCCCACAGAACCACGGTTGCCTCACCTCAACAAC AGCTCCTACAGAGCCACAACCACCTCACCGTCAACATCACCATGCACAAA CTTTGCATCAAGCTGGCCACCTCCAATCCTTCTCGTGTTGGTCCACCGTT GCCTCTCCAACCATGCGCCTTCTCACACCGGCGCCTACAATGGCGGCACC ACACGCCTTCCATCATCAGCTTGAGCATCGTCATTGCCTCTTCATCAACT CAGGTTCCCGCAGACCACAGCTGCCTCACCTCAACAACAACTCCTAGAGA GCCACAACCGCCTCACCATTAACATCACCATGCACAAACTTTGCATCAAG CTAGCCACCTCCAATCCTTCTCGCGTTGGTCCACTGTTGCCTCTCCAACC ATACGCCTTCTCACACCGGCGCCTACAACGGCGGCACCACACGCCTTCCC TCATCAGCTTGAGCATCGGCATTGCCTCTTCATCAGCTCTGGCTCCCACA TAACCACGGCTGCTTAACCTCAACAACCGCTCCTACAGAGCCACAACCGT CTCACCTCACCGGTCAGCTATCTACAGTTCCACACTCTCCTGACCTCCAC ATGACTTCCACCTATCCAACGCGGTGACAACCTTGACCTCTACCACCTCT CCATCAACCCTCCGGCCATCTTGCCTCAACCATCTTTGCCTCGGTCACCA CATCCTCTACCTCTCTCTCAGATCCATTCCATTCTCTCCTCTTCTCCTAG CACCAAGCTCTGTTCACTTTGCTCCTCACAGCCGCCCAAATCAACTCCAG CAGCTACTCCCTCCTGGACTCCTCTTCTCAGCTCCGCTTCATACCTCAGG CGTCCACACCTTGCAGCTCTACAGCTCGCCTCTTCCCGGAGCCAAGAACG ACCAAACTGGAGACCTCACCCAGTTGTCTCCTTCCACGACCACAGCCCAG CACCACACAGCTCCAGCCATCACCATCACCTCTGCATCTGCCCATCTCCA ACCAGATCAGAGGTCCTCCTCCACCTCCAGTTTCTCTTGGTCCCCAAATC CAGCTAACTTATTTTCCTCCTATCAACATCTCAGTTGCACCATTCTAACT AGCTCACTAAGCAACCTCCGTACAGAGCAGCAACCAAGCCTCACACAACA CATCGTGCAACATAAGGTGGTTACTACCTGTAGAGAGCAACGGGATGCGG CCTCCCGCCGCTTAGGTGACTACAATGTGCGTGGTGTTGTTGACAACAAG AGTCGGGATGGGTGTTGCAGTGGTGAAACGGTGGTAGCTAGGGTTAGGAG GAGGAGCCTAGCTCTGATACCATGTTGGTTTTTGGGGACAATTTCTGGAT GGGCTTAGTCCCTTGGACATCCACACCCTCTTATATATAGCACAATCTAG CCTTACATCTTCACTCGTACACTGGAATGATCTAGACTCTAGTAGGACAT TACTACTATACTAATACTCCCTAGAATACTCTAGACTCTACAAGAGTAGT ACTACCTACACTAACTCAGACTCCAACACTCACTGGAATACTCTAGACTC TCCTAGGACAATACTACTATGCTAACCTAGACTCCAACAGAATTGACCTG ACAATCAACCGTGGCGACGACCGCACGGAATGGCCATTGCCTTCGAGGAC GACTTCTAGCGCTTCTTTGCCAGCTGGATCCATGGAGATGATGTACAAGT GTGGTGAGGTGATGGCCCAAATCCAAGAGTCGTCGGTCTCATCAGTTACA GGCTCCATTTATGCATGGAGGTGGTAGGCGGGGGAGCATAAAGAGGCTGC CATTTGCTTGCCCGCCTCATCAGTTACAGGCTCCGATCGGTTTGTTTCAG AGCAGAGGTAGCGTTTCAGTCTGCTCTAGATAGCTGAAGAGATGGATACT CCTAAGGAATTAAAACAGTAATGGGACCTATGTGGGCCGTTTGCTCCAAT TTGCTGAGCGTACTAAACCTACAAGGAATTTCCAGAGTCAAAACCGAAAC GAACTAACAACTAAACGACAGTTTCTTCGCTGAGTGAAAAAGCTTGCTGA CGTGGGATGCTGCAAACTAAAAAAAAACTATTAGAGAAAACATACAGGCC CACCTGATGACTTGGACAGCTTGCATGTTGAGAGAAATCACTTACTGGGT TGCTCCAATTTAGGTATTATTATAGATACCACTTCCAAGCTTTGCAATCT TATTTTCTCCATAAAACAAATAACACATATACCACTTCCAAGTTTCGGAG TACATTGGCCTTTCATGTAGCCTATTAAGCGTTGCTTTCCTACCATTGCT AGAAATTCTACTTTTACATGTGAAATCCTGTATTATGTTTTTTGCAATAT GTAAAATCCACCATGGTACTAGCGTAGGCATCTAAGTTATTGCAAATGTA TGGTTCATAATAACATCAACCATCTTGTTCAAAATAACAGCAACCTCAAG AATAAATGCATGCTGATGATATAGAACTTTTCTCATTCAAAACGATTAAG TTAATTTAATTGACTTGTGTCAGTAATTGACCAAGTAGCGTCCGAGTGAG TGACTACATCAAGTGCCACCCTTACTCTTAAGTTTAAATCACAGGCTGCG TCTGCAGTTATATTTTATACCATACATTGTGTAGTTTCTCATGATATATC AGACAGTGTGTAGTTGAATTGATTTTTCTTGATGAGGATGAGAGTGCCTT CGATGATTTACAATTTCAGCGGGGCTCTCTGAATGTTTCAGTGCACGTTG CAATAGATTCTGATGTTTGAATCTTTTCCATGAAACAGATTGTCTGATGT TGCTTGGAACCCATCAATTTTCCATGCAAATCCTTGTGGGTTGGTCACAG AATCAACTGATATAGTCATCAAGTTGAAAATCGCTACTGCAGTTGTCTGT TTGATATGGCAAGAATTGAATGGGCAGAATCCACAATTATGTCAAGAAGT AAGAGAAGAGTGTTTTGCATTGGTTGCTGGGCAATCTGTTGAGAAGCTCC TTGAGGTAGCACGTTCATTCAGTGATGCAAGCTGGTGTGCTTGCCATGTT AAGGAAGTGCTGACTATCTTTGATGCACTCATTGATGTCCTGTACAATGT ACATGGCTTACCTTTGAACAGATATGATGAGGTTGTTGTTACTTTGAACA AGATGGTTGATGCTTTGGGTGTAATACTTGGTGGAACTATAAGTGACATC GATAACAGTGAAGAATCTACCATTCATCGAGCAACTGTTGTTTTCAAACA AGTCCTGGAACTTTTTGGCAGCAACACGGATATGGTGCAGTCAATTCTTG CAACTGGAGATCGCACCATTGATCCTTGCTCTCACATGTTTCTTTTCTGG GCACGCAAGCTCGAGGAAGATGCAGAAAGGATATGCCAAGGTCAAGAAGA AGGTCAAAAATGTCAAAGACAGATAATCCTCTTGAATAATGCTTATGACG TTTGGCAGATGATGCGCTGTCCAGGAGCATCCTTCTCCAACGTAAAACTG ATGAGTAGCCTCATTTGTAGGATCCAACAATACAGGAAGAGCTACTTTGA TGAATGCTGGGTTCCACTTGTAGGGCCGTTAAAGAGGGAAGACTATCTGA GGAACCCACGCCGTTAATCCCTGGATGAATTTTCTCGAGGATTTGTTAGT ATCTGCTGTCACCAGATGACCTGGAAGGTTGTACCTGCTCTTAGGTACGA ACTGCGAGACGAGATAAAGAATGCAGTTGTTACACCATACAAGGCTTTCG TATGTGCACTGCAGGCAAATCCAGCCAGACGTTCAGTGTTGGCCTATCTA CTGAAGCGATTCGTGCGACGGAAGAAAAATCTAAAGGATCATACTGTTGA GCAGTTGGAAAATAATATTGATCAAATTTTTGAAGGATGAAAAGACAGCT AAATGTAAATGTGTGCCTGCCATGAGCCTACTTGTTTAACCTGTATATTT ATCTCCTTAGGAGGTATTGTTGAGCTGTTGGAAAAGAATATCGAGCAAAT TTATGAATGCTG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.