Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

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GrainGenes Sequence Report: AA016229

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Sequence	AA016229
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA016229
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	GAATATTTAATTCCGTATCGTGAATTGGTGTATGCTTTAAATACTTTCCT CCTTTTCAAGCCCGGGCACACCTCTTTTTCCTCCTCCTTGCGGTCTACTC CTCGTCTACCCCCAAACACCAAACTCGTGGCGAATCGCGCGCAGATTTGC GCCGCCGGAGCGCGACGACGTCGCGTCCATGGCCGCCGCGTTCTCCATAA GGTCCGTGTGGTAGCGCCGCCGCGTTCTCCATAAGGTCCGTCTGGGAGTA CCACTTTTGCTCTCTTTTTTTCTGATCTCCGTTTGTGATCTATCCGTAGG GGGTTCGCGGCGAGCAAGAGGGGCGAGCAGGCGGCGGCGGGGCGGCGTCC CCTGGGCATCAAGGATCTCCCTCCTATCGAGGCGCCAAAGTTCCGGTGGT GGGAGGACGAGCTCGCCAGCGCGGTATCTGCTGCCGTTGCGGCGCCGTCC CCGAGGAGGTCGCCAAAGGCGAAGCCGCCGAAGAAGAAGCGGTCCATCTC GGACCTCTTCGCCGCGGCGCCCCCTTTGCCCGTGCCCCCCTCCGATGAGA GCGGAGGCGACGAGCAAACCGAGGTGGAGGACGACGAGGCGCTGTTGGCG ATCGTGAAGCGGGCCAAGGAGGAGAAGAAGCGTAGGAGGAGACAGCAAGA GGAGGGAGGGGATGAGGAGCAGGAGGCCGCGGCGGCGGACGGCTGCGTTG GGCGTGAGGCCGAGGGGAATTTCGAGACAACAAAGGTGCGTGGTCCAGCC CAGCCCAGCCCAAACCCATCTCTGCCCCTTGCCTGTCAATGCAATGATAT CATCGTCTGCTATTATTCCTGTGTTTTCTCCGCTGATTTTATTTACTACT TTTCATCTGCTCGATATGGATAGAATGATTGATGTTGGATTTCCATTGTC TTGCTGCACAGTACTAGGATGGTTAGTACTATATGCTTTAAGTCCGAGGA TTCGATCGTGAAATGTCATTACCATTGTGGTTGTCCCGTATAGGCGATGT TATTGCTTGTAAATAGTACATGCTAATCTGGTTGGTGATCTGCGAACGCA CGCTTATTATGGGGGTCAATTAGTTGTAGCTTTATATGGGGACCGGCCTG TCGAGTCGCAGGATATTTTATGTATGTTTTGCGTGTACCGTGTCAAACTC GGTTGATATTCTTAACCAGGCCTCCTAGCTAGTTCTTGCTTCTACACGGT TGTTGTGATTTGTGGGTACTCGATAATATCTGGCAGGCGCACCATGATTT GCTGGTCAAAGCTGTACGGGTCGTGTGCTAAGCCATAAAGTTAGAACGTT CATTGTGTTTGGGCATCATTACGTTTGCTATCTTGGTGACCGTTTGGTAC CTATCGATATTGTTATTTCATGCATAATTTCTTTAGTGTGATTGATATGA TCGAGTTCGCTGGACACTGGTCGTACAGTTTGTGCAGAGTTTGGGGTAAC TTGGTGAGATGTATACTTACTCATGTATTGAATTAACTAATGTTGACCAA CAGGGAGTGATCCGTCCCTTGGCTATACGTTGTTAGATGAGACCTTTTCA GCTACGAATTAATACGTGCTAGATATAACACCTTGTTTAATTTGGTAGCA CCTGCGACTCGAACCCGGATGGGCAAGCTATACAATGTTAGATGGGACCT CTCTTGCTGCGGATTAATACACGCTAGATAACACCTTGTTTAATTCGGTC ACGACTCGAACCCGGGTGGGCAAGCTCACCACTGTGAGGTCAAGCCATCA AGCCCTCTCTTTGTTTTCGTATTGAATTAACTAAAATCAAGAAGTAACAA GAATCGGCTAGATTATGATGACCGGTTAGACCAGTAGCGGTTGTACTTGA CAGGGCTATTTGGTACTGCAGCATGTGTACCATATCTTATAGTACGTACA TGGTCTATCGTGTTGCCTTTTCTCACACCATGCACGGTGAGTTGTGGGCT GCGTACGTATGTCCCTTCCTGCACATATTTCAGCTGGGTTTGGGACCCAT ACACCAGACTTTATCGTATGAAACAGACGTGGAGCAGCCATTTACTAGAT CGCTATCTTGTGCATCTTTCTCTTGGATACGGGACTTCATCATTGCTTAT CTGATACTTTTATTCTCCTGCCTTTTGTCTTAAAAACTGTTATATAATTT GTGGATGTACGTTTGCGCATGATAGCTAGATTAGAAAACGTCTTGAACGC ACCATTAACCAACAGTGCTTACTAGATGGTGGTGGCTCCCAATATGTCAC AGTCAGCCCGTCACCTTATGTTTGTCATGATGCATGATCATCTAATTTAC TCTCTTGGGAAGTATTCAAATAATTAGCTAGTTGACCGGACAATAGAATA TAAATACTCTCTAGGGTGGTTGAGTCACGTGGTGGCGAACCTACACACAC CTAGGTTACCTCTATCTAAGTTTGAACTTTGTGATATGTTAGTTTTATCT CTTCACATCTGATCATAATTAGCATTTGAAGTTTCCTATATTGTGGATAC TAATGGTGATAGAACCAATTAAAGTACATGCATAAGACGTTCAACATTAT CTTGTGTGTTGCAGGATTTAAGTTTTATAATCCACGTTATATATTTTTCC CATGAGGGGTCACATTTGGAATTTGATAAATATCATCTATTTACATGTTT GCTACTTTGATAAAACTACTCAATGCATTTTAGACTTACTTATTTCCTGG TAATATTTATAAGAATTTCATCAACTAGTGTTTGTATGTTGTTTTTTGCT CTTAGCTTAACGATCTTGATTTATACTACTCCCTCCATCCCGAAAAAGGA TGTAGCAGATTTTTCTAAATTCGTATATATCGTGTCTAGATACATGAGTA GCGTCTAAATACATGCGAATCTAGACAAATTTGTGACGTCTTTTTTAGGG CGGAGCAGTATGTATAATCTTCCTTGGGTTCATCTTATGCTAAATAATAC TAGTTAAATGAAAAAATTGTACTCGCATGCAGAAGCCGGTTTTCCCCCTT TTGAACATTGTTGGGCTGAATATGGGCATGCATATCCATTTATTACGACA ATTCATAAGTTAGTTGACCTGCGGATAAAGGGTTTCCTTGTCACCGGTAT GTAAGACAAAATATTATATTTTTATTGGTGCATTTGAAGGTAATCATTGC ATATAACAAACATGTGATTTCTTTATTCAACAAAAAAACTACATATCATG ATGAGGCTAGTGGCAGAGGACAAAAATTTAATGTCGAGCGGACTCTAATG TATAAAACATTTGAGACAGAAAACTAAAGTAGGCATTAGCGAAGCAGCCC GGGTCCGTGCCTAGCTGCCTGCTCTTTGCGCGCTATTGGAGAAGTTAGAT GCGCCCGTCCTGTTGCTGACCTCCTGACACCATTCAGCTGCTGCACCGTC AGAGTTCGATGGCGCAACGGTAGGTTTAGCTAGAGTCTCGGTGCTCTAGA GGGGAGCTGTATTAGAGCAACTCGTGCGAGTCGCACCACGTCAGTTCCCC ATCTCGCGACACGGCTCGGGCTCAAGACCACCCATCCACACACCCCAACT CCTTTTCATTTCCCTATGCAGACAGCAGAAAGCAGGATGGAACGCTGGCC ATATATGTATTTTCCCCCAAATTGAAAGTAGGGCGCATGCCAAACCTCGC CATGCCATACGCAGAGCTCTTCTCGTGGATGAGGCATTACATATTTTTCA AGCAAACCACAAAACTATGTTCTTAATGCATTGATGTATAATTTTTTTTG TACAGTTCTACAAAATAGGATCATTACATGAATATATAGAGTTGCATATT AATTATGCATCTGATGGGTTGGTGCAATTTTTTTATTATATATACATGAT GGTTGCCTTTTGGATGTATGTTGCACTCTTCGTAGTACATAGCTGATTGT CCATTCCTAAGCTAGTGAATAGGATGTTGCAATCTTAGGACTGGCCTTAC CATCATAAAAAGTGCATTTATTAATTTATGGAACATTAGAAGAGAAAAAG GTTAATTTTTGGAGAAGCGAACTCATGGTTAAAGAAAGCTCTTAGTATTA AATATTCTTTACGCTTACCTAGGAATTAAATATGCCTCCACAAGTATATG AAATGTACACCGAGCCAGATGGTATCAATTAAGAATGTTGATGTTTGTGT TCTCAATAAGTCATCGGTTTGGCCATCCCGAGAAGATGTTTCCGAGAGAA GGGTATGGTGCGAATGTATGGGCGCACTGCCTATGGAATGGTAACCTAGA ATTTTTTAAACTCTTGTCTAGAAATTTTATATGAAGTGCTTGAACGAATG AATGAGGATATGTTTTTGACGTTTTATTCAAAGTTGAAATTATTTACCTA CAATGTTTTAACCTTTTATTATTTACTAGTTTGGTATATTTGATTTTTAC ACTATTTGTATTCATTAAATCAAGTAGGTGCATTTACGGATGAATTTATC CATCAAAGGTTGTTATTAAATATGCATCTGGATGTGAATACAATAATGCG TATGTAAAATTGCTGCAACATGCGCAATCAACTATAAGTTGTTTTCAGTT TAGTTCAAATTCATGTTCCTTAAGATTAGTTTGCCATTTAATGGTGATAT GGTACTTTGCACATGAAAATTTTAAGCCCAGTATTATCTCATAGTGCACA AATTAGACTTAAGGCTTTGTTCGTTTAATCCAATAGAGGCTGGGATTGGC CTGGATTGGGTCCCAATTCTGGTTATCCAGCCTGACAAGATTTTTTCTCC AGCCCAGCACATTTGTTGTCTTCGTTTACGCCTAGAAGATATTATTAGCC CGGTTCATCCAACCATCTTGTACTTAGTAGGCCTGGAAAAATTTTATCAT CACCGGACCCATGGAACAATTCCACAACACGGAGCAAGCGAAGCAACCGA ACGAGGCATAAATTAATCCCTGCTGTCAACAAGGCATAAACGAACGTCTT TTGCAGATGCAAGGGATTCAATCCATGCGTGAGATTGCCCAATATTGGAT CGGGTGGAGCACATGGATCCACCAAATCCCGACTTGGATCTATTCTAGAC AGGGATTCAATCTCAAGCAACCGAACGGGGCCTAAATTGGAATTAGAGTA GTATATTAGCATTGAATTTTGGATAGGAGAATATTTGTTCCATGGAAATC CTCCATGATGATGAAGGCTGGGCGCTTGGCGTTGGTGAAGTCTGTGTTGA TGGCGATCCCCCTGCACCAGATCATAGTGCTGGCACTCAACAAGAAGACC CTCAAACAGATCCAGAAGATTTGTAGGGGCTTTCTATGGGCCGGCAGAGC AGATGCCAACGGAGGTCACTGCCATGTGAACTGGGACAGAGTCTGCAGAC CCCTAAAGCTTGGAGGTCTAGGGGTCCCCGACCTGGCTCGCACGGCCATT AGCCTCCGGACTCGGTGGATCTGGAGGATGCGTACCGACCCACTGCGACC TTGGCGCGGCCTTGATATGCATTTCTCCAGCACCGAATTGAAGGTGTTCG ACGCCTCCACTACGATGGTGGTTGGGAATGGGAACACAACCCTCTTCTGG ACGGACCGGTGGCTCGACGGGAGGACCATCGCGCTAATCCGAAAACGCGC TCGTAAGAGCCGCACGGTGAGAGAGGCGCTCCTTCAGCGCCAATGGATCG CTGACATCTAGGGCGCGCTGAGCTTGCTTGCCCTCTGGCAGTATGTTCAG CTATGGATCAGGCTTCGGGACTTCGCCTTGTCAGAGGAGATAGACACCCT TCTCTGGCGGTGGACGACAGATGCACAGTACACTTCCAAGTCTTGCTACG AGTTCCTCTTTGAGGGGGCCCTCCTATCAAGCTCTTGGAGGCTGAACTGG CGGACCTGGGCCCCGCCACGGGTCAAGTCTTTGTCTGGCTGGCTTGCCAA GACCGCTGCTGGACAGGTGAGAGGCTGGCTTGGCGCGGACTACCGCATCC CCCGCGCTGTCCCTTGTGCGGTCAATCGGTTGAGACTATGAGGCACCTAC TCGTTGGATGCCCCTTCTCGAGATCGATCTGGCACGAGGTCCTGTCCTGG ATTCGATCTACGGCTGCCCTCCCGGAAGAGGATGAGATGGACTTTGTCGA CTGGTGGCTCAAGGTGTGCCAATCTACCCCATGCGCCATGCGTAAGGGCA CATCATCACTAGTGATGCTGACGGCATGGTGGATCTGGAAGCTTAGGAAC GCTGTCGTCTTTGAGAACATCTCACCGGATCTAGGAGGGCTCCTGAGTAC AATCCGATCCGAGGCTCGCAACCTGGGCTGATGCCGGGGCAAAGGGACTG CGTGCGTTGTTACCCGTCGTCTAGATCTACCGTGTCGAGTGGGTTGTGTT GTGCAGGGTGTTCGCTTGTTTCCGAGCGTGTAAATTTTGTACAAAAATCT CTTTTTTCTATCAATGAATCGAAACGCAAGCTTAGCGTTTTCGCGAAAAA TAGGAGAATATTTGTATATGTGGTTGACTTATAGATGTGGAAATGACTGT GCTATTCTCAACAGTCAGTTCCTGTTTGATCCTTTTTCACCCTTACTCAG ATTATTATTTTTTACTCCTGTTCCTATAGTCAACTAGCAGTTAGTTATGT TCGTATCAAGAGTGCGGAACCTCGTAATTGGTCTTCACACTTCTCCAACA GAACATAAACATGTTTGCATAAATATTTATTCCTAAGTGTTAGAGCCGCG CTAAGGTGTCATCACAGCCCCTATATATACCATGTGTATTTCTTTTAGGA TGAGGGTTTAGATTTTTTTCTAGGGATATGGATAATTTTTTAGCCACACC AGGTGCCCATAACAAGCTATATCATTTCTATGTATCACTGTAACAGGAAA TGTTACTTTGCTATATCCTCTTAAATCCATCTTTCCCCTAAACATTGGTG ATGCAATGGGAGACTGACATTAACAAGCTGTATCTACAGAAGTACATTGA AGGTTGTAAGTTCCTGTCAGTGTAAAAGCATGGTTCATCACTTAGCTGCA AGCCTGCAACACGAACCTCATTTACTTATTACACACTCGGGCTAAATTTC CATATTCAAAATTAAGATGAAAATTATGTATACTCAAATACTTCAATGTC TAGAGCGACCCACTTTTGTTTGAACATGGTATACATAATATGGTAAATAT GATGTGTGCTGTTCATTTTTTTCATTTTTTAATTCAAAGTTATATCTATC TTATGGTTTCCAATAATGTTCCTCAATTATGTGAATTAATTTTTTTGTAT TCACAGTCATTTGTATCTTATTGTTTCCAATAATAATGTTGCTCAATCAT GTAGGAAGCACCTGAAAATCTTAATTTGCCTGATGGATTGGATACACAGC CATCACAGAAACCTGAAGCTTCACAACATCTAAGAAAAGAGATGGAACAT ATATCTAGAAGAAGGAAGCAAGGGAAGATAAAAAATTCAAAGAAGAAGGC TGACAAATTAAAGCGCATTGACAATAATAAGGCCGACAAAGTGGGTAAAC CACGAGACCTGGAAAAACATCTCCCTAGGCAAAGCATACTGAAGTGCATA GAGCGCACATCTGTCAAAATGGTCAAGGAGAAACATGTCAATTCAGAAGG CAAGGAAGTAATAGAACTCAGTCGCAAATCAGTGAAGCGTGTCAAATTCT CTGAAGCGGATGATATACTTGGCAGTGAGATGCAAGGTTGTGAGCTACCT AAACGACGAAGTCTCAGCAAGCTGTTTTCAGATGCTATGGCTTCTTCTTC GTCATCGTCATATTCATCCACGTCTACTGAAGGAGAAAAATGTATACCTG CAGAAAGTAGTAGTTCTCATATGCCGAAGGAAGCTTTCATCAAGACTAAA GAAGCAAATCTGAATTCAAATCATGAGGACTCTCCTACTGGAGGAGACAA ATGCGTAACTGCAGAAAGTTGTTCTCCTATGCCTAAGGAGGCCTTCACTA AGACTAAAGAAGCAAATCTGAATCATGAGGATTATCCTACTGAAGGAGAC AAAGGCATAACTGCAGAAAGTTGTAGTTCTCATATGACCAAGGAAGCCTT CACTAAGACTAAAGGTGCAAATGTGAATTCAAACCATGGGGATTCTCCTA CTGAAGGAGACCAAAGCATAACTCGAGAAAGTAGTAGTTCTCGTATGCCC AAAGAAGCCTGCACTAAGGCTAAAGAAGCAAATCTGAATTTAAATCATGA GGATCCTCCTGAGCCTAGCAACACAGAGCTGTCCTCTCATTTGCTTGATC TGAATACACTGCCAGAATCTACTGATTTGAACTACATGTATCATTCAAAT TCAGAAGTGCCATATCTTGAGCATGCACATAAGGAAAATTTAAATTCCGA TGTCCAATTGCTTGTTGGGAGAGAAAACCGGAGGAATTTGTCTTTTGATT CGCACAGACTGGCAAGCCAACTACCTGTGACTGACTCGGAAAGTGTTAAA AATGCAAGGTGGGCAGGCACATTGTTGCAAGGTGAGCTAGTCAATGTTTC TGGGGTAGATATTGTTTGTCCTCCATTGAGCGCAAGAGAGCTTGGTGAGA CTCATCTTGACTGCAGTAATGTTTCAGTAAAAGATACTATGATTACGAGT ACCTCTACTTGTGCATTGCCAGGCCATACATTTCAGGACTCGTTTCAAGA GCACCAGAATGGGTTCCACACTAATCTGAACCATGGTGGCTCCCAGCTTT CTAACAGCGGGAAATTTCCTTCCTTGCCATCTCCTGAGTTGAATCTGCAA CATGACTGTAGTCCTTCTGTGGGACAAACATTTCGTTTGATGGGTAAAAG TTTTGCAGTTTGCACGGAGAGAGGTGAAACATCTGCTGAGACTAGACAGA AACATACAGGTACGTCCACCAATGGCTATGGGAAGACAAATGCTGTCTTG GAGTTGCCACGGCAAGGGCAACCTTTTCTCTCTTTACAAGCTCAAAGTTT CCGCAATGTTACAGTAAATTCTACCAGTAACATTCATGCTTCGACATATC ATTCAAGCACAAGTCAGGCACATTTTGGATACAGGACTCAACAGGATTTC AGTCACCCAGTCCCTCCTGCAGCTAATATATTTTCTCGAGATGGGTTGCC ATATGATAACAGGTTCATCAATTTTTCAAACTCGCAGCCCAGTCAGCCTT TTCTATTGGGGTGTCCACCTCCTCCCAATCACCGTAGTGCAGCAGTCCAT CAGAATTCGCCGCCTCCTTGGCGTTATTACTCTGATCCCATCAATAGGAC AGAACCATCCACAGCACCATTTTGGCCTCCAACCAGACAGCATGGGACAC CATCTTCAGCTTTCCATGGGAGTTTCCCTCAGCAACATATTGTGCATTCA GCAACCTCATCAGCTCGGCCTCGTAACTCTGTGAGTTCTACATTCAGCCA TCCAGCTCGGATAGTTCAGCAAGCTTCGGTCAGGACAAGAGATGCAGCTC TTTCATCCAAAAATTCAGAAAACAGAGCGGGGAAAGCTGTTGCTGGCAAT TCCAATGCTTCAGCTAGTGGTCACTATGTGCAGAAGAGATCAGGCCCGGT TAAACTCATTCCCGGGGCGAAGCATATCTTGGTGCCAAGCGATAGCACAG GGGATGGCAGTTCTATGCCCGTGTACTCCTGTGTTTCCTTTGGAAGTAGG AGCGGAAATGCTGCGAACAAAGGAGCATGATAGGCTTCTGTAAAAGTTTT GGTTGGTGGCGGCTTCATGAATCTACAGACATCGGCGCTTTTTTTATTCA AATTATTTCCTTTTTATTCTCGCCTTCTGAAAAATGTTTACTACTTTTTT TTCTGCGTGTGAACCTAGGATGACTATCCTGTTTAGGCATAGTTGCGATA CTTCAAATGCTTTATTTGCTTGCTTGCTGAATACTATAGTTATTTCCTCA GATGAACCTGAATCCATGGCTGATGTAGCCTAAAACCATGTACTCCGTTA TATTTCGTACTGCTGTTATACTCTTGGTCTGGATGCTCAATGTCTGTTAT TAAAGACAGAAAATGTTGCCTACATTTTTGTGTCGCAAAGT

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.