Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA045973

[Submit comment/correction]

Sequence	AA045973
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA045973
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	CTGGCACGCATCACGAGGGCGTCGCCCACGAAGCAGAACTCCCCAAATTG CCTACCAGGACAATCCGCAGATAAATCCGCCTCTCGATTTTTCCACTCTT CTTTCCTTTCTCGATTTGTCCAAAATTTTGTTCCCCACCAGCGATTAGTT TGGTGTTTCCAGCATCACTCTCCACTAAGCCGCCCCCCCTCTCCTCCTCG CGCTTGTCTCGTCGTTTCCTTCCCAATTTCACCGCCCCAGATATTTATTT CCAGTCCCGATACCCATTTTCCTCGATACTTTTGCTGCCTGGCCTTGTTA ATATCTGCGTTCGGATATTTGTTCTTATTCTTTTGCTTTCTTGGGCGCGC GTTCAATCTTCGGAGGCTGCCGGATCTTTCGCTCCCGTCGATTGCTGCGG GCGACGGCTGAAGGTATCGACTGGCTACCCCAAGCTTTCTTGGTTTCGCC TCTTGTAGCCGAAAAAGTTTTGTTTTGAGCCATGTAATGATTGTGTAGTT GGGATCTAACCGTGTAGTTCCTGTTCGGGATGTTCCGTCTTTTTCTCTCT TTCAGATAATTTGTGAAGAGAGGCTGATAGATAGGTCAGGCTTGTTTGAT TCTTTGTTCCCACTCCCATCATAGATGATGAAATCGGGGGAAGAAGTTCA TCTGGGCCAGAAAATGGACGGTTCTCTTGAGGAGAAGGCTGCGGGAGAAT CCGTTGATGAGTCCAAGATAGAGAGGAGCCACTCAATCAATCTGAATTCG TTACCACCAGTATCTGCCTCCACAACAGAGATTGGTGTCTTGCACGGTGC GGTGGAGCCAGAGGCCAGTGATTCAAGCACACTGAAGGGAGATGACAAGC CCAGTGGTACTGATCATAAGAAGGTCCCGAAGAATGAGGAAGTGGACGAA GCTGAAGTTCAGGTCTGTGTAGATGTGAAGAACAACTCGGTTGACCCTTT GAATAGTGAGAACAATGTCAGGGAGAAGGATGCTCTGGTAACTGTGCCAG AAAATGGAGCGTGTGCGGATGATGGCAATGATTATAAGATAGTTAAAGTT CTCAGCATTGTCAAAAGGGATGAGTCAGAGGAAATTATCGAATCTATTGA TCCTGTAACAGTTGCGGGGTATAGAGATGAGAAGGGCGGCTCCGGTTCTA CTTCTGGAATTACTGCGGTGCGACTGCCTGGCACCCGGTCGTCTTGTTTC CATGGCGTGACCAGGTAAGCTTTGTTCTGCGTTCTTATAGTTTGTAGTTG GTCAGTGGAAACTAAAAATATGTGTTTCACCACGTTAACTACACAAATCA TAGATGCGGATACTTACCAAAGTATCATCCATTGTGCAGGCATAGGTGGA GTGGAAAATATGAAGCTCATTTGTGGGACAGTACTTGCAGAGTAGAAGGA CGGAGAAGGAAAGGAAGACAAGGTATGCCTTCTTATTTTAGAGCCATCTA AGGGGGCAATTATATACAGTTTATCTTATTGTGTCACAACCTGTTCCGGA AGTGTACAGTCGTGTTAGATGGGCGGATTATCCTTACAGCATCGCCCTCA GGGCTCCATGGTTGAGTGTGTCTAGGGAAGCATTTGTGCAGGAGAGGGTC ATTAGGATTACGAGTCGAGGAGTCGAGCCGAGTCGTTGGGGCACCGACTC ATAGACTAGTCTAGACTACTGCTCGACTAGTCAACATGTACTTCAGCAGT AGCTAGAACAAAATACTATCATGTTTGGCAACCAGATAGGAGATTTAATA ACTAAAACTGACATAAGTTCAACACAAGTTACATAACATAATAATGCTAG AATCTAGAACTTCATGTAGCGAGTTTAGGGTTCCCAATTTTCTTCCTGAG AGTCTCACTTATCAGGCCAAAATTGAGTCGATCGACTCAAACAGCAGGAC TAGTCTAGACTAGTCCAGACTAGTCCAGGACTAGTAGTTCGATTCAATCG ACTCAAGGAAATAGTCGAGTCGACCAACCGAGTCGACAGTCAGGTTAGGA CTTGTAGACTAGTCGGTGGATTCATAACCCACACCATTGGGAGAGAACCA TGGTATATAGATACATAAATAACTCTGGCTTGTCTTCATTGATGAAGACC TTGTTATATAGTGCTACATCTGCGATTTAAGTTTGTATGCTCACACAAAT TAATATACTACTAGTAGACGAGATATAGACGTATGGATACATGTTGTGTT TGGTGTATTTATTTCCTAGGTACAAAAGGCTAAACATGTAATTGATTCTT CTAATGTGCTATTTTGCGGGCAAATTCACTTGTGAAGTAGTTTTATCTCT ATGGTGGTATGTGCCATCAGGGTATCATTTCGTTTATTTCTGCATGACAC AGATTTTGCTATCTGTCCAGATCCTTCATGTGTATTATTATGTCGTTTAT TACACTTAGTACTGCTGATGTTGTACGCTTGGGCGGCAGTAATGGGTTTC TTTACATATCTTATCCCCAGCAAATTGTACCGGATCAGCATAGCTCTGTC ACACTTCACTATTTGCAGATTAGCCAGTCCCTACTTCTAACTATCTAATC TTGATTATATTCCCTCGATTGAAATAACCAAACTACCAAAGAGACATAAT TGTGAATGGTATGATAGGATTTGTCGTTATTTAGCATGCATTTAGTGGGC TGTTAGATCCTAACACACTGCACCATGCGGAGATACCTTTTCAAATTGTC CGTAACTCTTATTCATCACGAGAGAAATGGAAAATATTATGAATTAAGGA GTGCCTATTTCTAACATGTAATTCTAGAGTTCTGTGTGCCATTTCTGTAA GACCTAGGAGGAGGTACATAGTTTTACAACTCAAAATGGATAATTACCCG GTCAAGTGACAACTTCACTGATTTTTTGGTCGAACATTTTTTTAACAGTT GGAATGCGGCTTTAACTTTTTTAATGCCTTTTTAATTTTTAGGTGGGAGT TTGATACCAACTTCGTGAAACTCAAAACATTTCAGCTACTCCCTCCGTCC TAAAAAGGATGTCTTTTCTAGATTCGCATTATCTACATGCGAATCTAGAC AAATCTGCGACATCCTTTTTAGGGAGGAGGGAGTATTTTTGTCTCTGCGA TCACTCTTGTGAACCAGACTGGTTCTGTGCTTCTGGCACTAACCCTGTTT TTAAATGAGGACCTTCTTGGCAAGTAATAGAATTGGTTTAAAATTATGTA GCATTTGATTGTCCAAAGTTTCTAGTATATCATGTTAGATTTTCATGTAC CTTTGTTATTTTGTTTTTCTGTAAGAAACCATAAAGATAGTGTTGAGATG TATTGCTTCTGACTCGTTACTGATGGTTTCTTGCTGGTGTTTCTATGTGG TGGTGCTTCAGTTTATTTAGGTAAGTATTATTCATTTCAGATCTGGCATA ATGTCTTTGTTTCGTATGTTTAGGTTCTAATCATTTTATGTCTAATTTCC TACTATGCAGGAAGTTATGATACTGAAAAAAAAGCTGCCAGGGCGTATGA TGTTGCAGCTCTTAAATACTGGGGACTTCATACTAAGCTGAACTTCTCAG TAATTCTTTCTTCATTTGTTTTTCTTTTGCTTCAACTGTTATATATTAAT GACATGATAATCTTACGAGTCAATACTATTTAGATTTCGGAATACGAAAA GGAACTGGCCGACACCAAAGACATGTCTCCAGAGGAATGTGTGACATACT TGAGAAGGTAAATCATGTTTGTATTCATTCAATGTTCCTGTTAGAGAAGG GTTATCATGACAAGTTGCATCCTCCTGCAGAAGGAGTAGCTGTTTTTCCA GAGGGGCTTCTGTCTACAGAGGAGTTACAAGGTGACCCCTCGTTTTCATT TTGCTCAGCTTGTGTTCTAAAGGCTAGCTTTTCTTATTCAAGACTACTCA ATCTCACATGTAACTATGTTACTATCATAGGAGGCAAAAAGATGGGAGAT GGCAAGCACGTATCGGACTGATTGCTGGAACTAGAGACATTTATCTTGGA ACTTTCAGTATGCTGCACATGCCTAATTCCAATCTTCACATCTCTCTTCA CAACTACATTTCATTTTCCTTATGAGTTTCCTCTTGTTTAAACTAGAAAC TGAGGAAGAAGCTGCAGAAGCTTATGATATTGCTGCCATAGAGATACGTG GCAAAAATGCGGTTACCAACTTTGACCGAAGCAACTACATGGAGAAAGGC ATGCATTGTATAGAAGGGGCAGGGTTGAACCTGCTTGCAACAAAGCCAGA ATAGAACTTGATTTGGCATCAAATATGAGCAGATTTGGTCAGCATTATTT GGAGCTTAGTGGTACATACAGATAGAAGAACTGGATGCAGCCTGTCATTA TTTGCTGCTCTACAATTCTTCAGATTATAGTTCTTTTTGGAGAGATACCT TCAGTTAACTAGCAAGACTTGAAGATTTTGACAATGTATTATTTTTAGTG TTTGTACTTTGTAGGCTAGAGTTGCACTGAAAAATGTCGCCAGCTTATAT TCAACGCCTTCTTGTCACATATCTGCCTGGAGAATACGTTGTAGTATATT TTTTATGCTTGGTTTGAAGTCACTTCCAATTGTATATGACAGCTTGTTAA ATCCATTATCATTCTTTTATTCACTTGTTTGCATGCACCGCGAGGCTGCA AGAAACTTGGAGAAATCTTATTATCACCAGAATACTCAATTCCATGCACA TATAAATCTTAGTCACCTCTAAAAGTTTTTTTTTTCGAGAGCACACCGGA GGCGTGCCTTATCTTTATAGAAGGCAGAAATCTCAAATACAAGAAAACCA GATTTCTAATTGCTAACAATTGGTCTGGCTGAACTCCCACACACGCACAC ACACCACTCTAGGAACCTACGGCAATACAACTAAGATGCTAAAGAGCCTG TCCTAAGAAGATCAACATCGCCGCGTCTCAAACAACGCCGGTCACTCCAA AGAACAACAACTTGAACCAAACTCCCCTCGTCGACGCACCATCCACCCTT GAAGCCAAAAAGGAGGTGACAGATAGATGGCGGGACTAGATCAGTCTAGA GAAAGGCGCCGTCTTGGAGTCCTCGGCAATGGCATACATTGCGCCTTTGA AGAACAACTTTGGACCACGATGAGCACCGGAGGGACGCAACAAGAAACAC AAGCCATGCCTCCAAGCGCAATGCTCTCAACAGAGGGACGACGTCGAGAA CGCCGCCAATGCGCTGATTCTACCAAACCTAGGCTTTCGCCCGGAGACAT TCACCAAACTGAAACGATTGAGGAAGTGTGAACACACCTCAACGACGCCT CCAAGAAGAATAACGACGTCCACGGACGCCGCCGGCACCGACCGAAGACG GGCAAGACTTTCGTCTGTATATTGCCGCACACAGTCCAAACAATCTGCCA GATTGGGACAGCCGACCTTGTCATCCACAACGCCGCCGCCGCAGCACCTT GCCGTCGAAGCCACAGCATCAAGGTCCACCAACTCCTCGCACAGCCGAGG AGACGCGTCCATCTTGTGCGAGGAGACGCGTCCATCTTCCTCCTCCAGCC CAAACAAGGATCGCAGACTCAACCAACTGCACGTACGAGGCCATCTACAC TGCTGTCACACCACTCTTGGCTGACAACACGCAGTGAGCACAACCCCTGA AACCCAGATCGGGCCCGGGAAGGGCCCAGATCAGGCCCGCGCCACCACCT CCAACTCCGTCGCCAGCGCCACCAGGAGGCGTCGCCGCTCCAGCACTCTG CAGCCGGCCGATGCGCCAGGAACTCCTTGCTGGTCGCCCTCCAGGGCCGC CGCCTCTAGCGCCTTCGGCCTACTCGCCCTCCAGGGCCGCCGCCTCTAGC GCCTTCGGCCTACTCGCCCCAGGCCATGCCGACGAGCCACCGCGCGCCCT CCCCCACTGCGACCACCGCCGAGCTCCACCACTCCTTTGCGCATCCCGGC CGTGCTCCGGCAAGCACCTCCAACTCCTTGCGTCGCCGCACGAACAACAC CCGCGGCGCCCGGGAGACGTCTCCCCCCGCGCGCGAGAGGAACCCGTCGG GGCGCGCCGACCCTGCCCGCCGCCGTCGACGGCCAGGCGTGGCCTAGAAA AAAGAGCAGATCGGAGCCGGGTTTCTAGGGTTTCGGTGGGGGCCTCCGGA GCCGCTCGCCCGAGCGGCCCGGGAGGTGGGCGGCTCGGTTTTCCAAATGG AACACAATGAGGACCTCTAAAAGATTCAAGACATGAAAATTACGTATTCC AGACTCTTAACACCATCCAAACCCAGAACCTATATACATCTCATAATTGT TCAGTTACATAATACTATTAAATCAAAATATGGTCCTCTAGACTTCTCCC CTCAAGTAGGTCTGACCAATTCCTACATTGAAGACAATGAAGCCGAAGTA ACACAATGCAAGGGGAAAATCTCAATACTATGAACTAGGAGGAGTTAGCA GTCATCAGGCGAACACACACTGCGCTCAGCTGATGCCTGAACAAAAGAGC TTTCCAGAATCAGTAATTTGGTTGGAAGAATGGATTCACATCCCTCGCTT CGAATTCTCGTTCAGCCCTGGCTCTCCTTTCCACCTCTACCTCCTCCAAA ATTGAGCGTCTTGCATTTGAAGTCTTAAACTGCACGAAATGAAATTAAAA GAACAAACAGGATGTCAACCACAAAAATTAACACATCTCGGATGTGAACA AAAAGGGGACAGGTGGAGTTTAAATTAACCAAAGGGATAAAACACTTGCC ACCAAGGACTTTGCCCTTTCACTATGCTTATCTCTTAAGCCAACTTATTA ATCTTTAGTATTAACTGTTGAGCTTATTAACCCAGCTTACCAAGGCCTAT AATAAAACATTAAACCTACCAACCAGAGGCAGTGCTTGCCATAAAAACAC CTGATGCCATCAATCCACCTGCATTCCTAATAATAATAATACGATTTTTC TGATGAACATAAAAAAAACTAAGAGTGTTTTGCACAACTTTGTGGTTCCA ATTGACATCAACATCAGTGTGTAACGTCGTCACTGCTACCAAGTCACTTC CACTGCCTTCAGCTTTTCTGTATATGAGTAGGTCACAAATGTGGACTGAA AACAATCTATCTATTGTGTAGATATGGAATAGGGCATTTTGACAATCATT TTTTTGTCCAAGGATGAGGTCCTAAGGATGTGCAACATCGCTAATAGCAT CCACAGTAACAGAAAATGCAGTGGATGAATAGGATAACTGAGATATCAAC TGAATAGAATAACCATGTGACATCTAGCATCTAGTGTAGAATGCTTGACA CTTGATCACTAAAACTCTGTAATTACATGATCATGTATTAAAAACCCTAA ATGCAATCACGGAGGCAGACGTGCAGTATCATTGCAGAGGCATACTCGCG GCAATTCTTGCTGCACACAGGAGACAGTTGCCCTCTTGCCACCATATTCA CAAAGAGTATTGTAAACTCTAGCATATAAAATAGAAAAATACCTTGTTGA CCAGAGCCTCAAATGCTTTTGATCCATTTTGTTCTATGTATTTCTGTGCA GCTGAAATTACATCATCAGGTTTATCTGAATCTTCCTTCTTGGGAATATA CCAGATGTTTACTACTTGCTGGTTCACAATCATTGGCCGCACAAAATGCT CATAAACATGCGCAGCACCATTGAAGTAGGGCAAGACCAACCAGCAATTG AAAAACAGTTTTCCATAAGACCAGAAGGGAAGCCTGCAGAATGCAAAAGA TTAGTCTGTACTAACAAGTAAGCATATCCATTCATCTCATGATGTACTAA CTACTACTCCCTCCGATTCAAATTAGTTGACTCAAAATTTTCAAGATACA GATGAATCTAATACTAAATCATGTCTAGATACAATCGAATCTTAACAAAT CTAAGTCAACTAATTTGTGTCGGAGGGAGTAACATAATTCTGTCCGCAAC CATCAGATAGTAGCAAGACAAATTATACTAAAGCACAGAAGTCGAGGGAC AAAGAAATGTATTTAACAATTATGATATATCTCTATCATTCTTTCAACAA ATCTCTAAAGTTACAAGACAGATTTCGTAAGTGGGTGTTGCATTAAGATC AGAGGTTTAATCCCATCAGATTAAACAATAACAAGAGTCAAGAAGTATCG AGAGAAAATTCTGATGAGATAGGGAGCTGTCTTTTACCATTCTAATACTG CAGCAAAGGTAAGCTCAAACAGAGTGATAAACGAGTACAACACCCAGTAC GTGAGCCATTGCTGATCATCTATAGAAGATTTTGTTTCTATTGCTCGAAC AGACGCATATCTGTAAATGCGTCAATGAGAACCTTAAAAAAAACAGTTGT CGCGAAATGGAAGCATGTGGTAAGTCTATGTATTTAGCAAGAGAAGGAGT TTACTTACAGAGGATAAGCGAGTGAAACTATGGGCCTGCAAGAAAAACAA AAGCATCTCATTACTTATAGAGGATGAGAACTGTCCGAAGACCTAGAGCA GAAGCATTTAGCTGCCTTAGCAACATACAACAACATGATTATATCACCTC ATCAAGTGCCAATGAACAAACATAAGTAAAGCTCACTTCAGCTAAAATGT TAACGCATTTGCAAATGAGTTATGTAGCCATATTCTGTAGATAGCACATA GCTATGTGGCATCATGTTCTACACAATGCAAAGTTATCCTGCTATAGTAC TACTAAGGAAGAATATTCCATTCCAGTAGGCTAGGCAGAAGATGTAAAAT CAATGAATGCTAAATAATGTGGCCCATTTGCAAAACTGTAGCCAAATTCT AACTGAAAGCACTATGTCATGTCGGCAGTTAGGTTGATCCTTCTGTGGAA CCATATTTGATGCTCGAGCAAACAATCTGAGCAACACATCTATATAATCT AATGCCACTTCCAAAAAGAACAAACTATCCTTCCAGGATATCAAATATGC TGAAGTCCTTATGTAGGTCCTTTCAGAGCTTCACTAGTCGCCTGATAAAT CAGTGCTCAGCTAATTCTGTTGGCATGCCATAATGTCTGATGAACCAAAA ACCCTGAACCCTTTCATCGGTTTTTTTCCCGAATCCAACCATATATTGGC TAAATTTCCCCAATATATACTCCAGAACTAAAGTTCCTACCACAAACCAG TGAAGATTTAGAGATTTTGAGCGAGAATCTGACTCTTGAGTGACACTACG GTATGCAGCCTAGAAACCATGCTATGATTCGCGCACGCTTTCCCTCATAG TCATCTCAACGGAGCTCATAAAACGACCGCTCCGAGCGACAAAGCACCAC GGCACGCCATTCATCATACAGAGAAATCGAAACCAATCCGTCCAAGGAGA CGAGGGGAAGGAACCAGATCAGGGGAAGAAGAAGCAGTACGTACCCCGCG AGAACATCCAGGTTGCTGACCAGCACCTTGAGGAAGGATCCAGACCCCAT TGCTCCGGCACCCCCGATGTCTCCCAAAGCTGCGAATCTGAAGAGTTGAA ACGGCAGTAAATCGGCAGGGGATTTGCTTTATTTATTTCGGCCGCTCGGG TTTGGTTCCTGTCCGGTTCCGGAGGCGGTCACCTACCTTTTTTGCTCGTG TTCGTTTCCTCACCCTTCCGCCAACCCACACTTTCCTTGTTT

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.