Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA007457

[Submit comment/correction]

Sequence	AA007457
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA007457
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	ATGTCGGGTGATGATGTATTTGTTAGTGGTCATATTGACATATCCGATGA TGGGAATTCTGCTGGTACTGATGGTGATGGTGGGGTTTCTCAGAGAGGAA AGAAGCGACAAAAGGGAATGAAGGTTGGTCCGAAGGTTATTGTTGAATCG AGTGCCAAGTCTAAGTCAGTTGTATGGGAGCACTTCGACAAGGTTCCTCG GCCGTCCAAAGAGGATCCTACCGTTGAGGTGATAATGGCACAATGCAAGT ATTGCAAGAAGTTTTTCTCCTACAACAAGGACAATGGGGGAGCCACTTCC CATCTGCTGCGACACTATAGCAAAGCCTGTCCAGATTATAAGGTCGCTAT GGCAAATGTGGCTAGTCAAACCCTTCTCAACTTTCAGCCATCAAATGCAA GTGATACAGGTATTCCTGTTTTGCAATCTTCTAGGGAGTATAGTCAAGAA TAAGCTAAAAAATTAATTGCTAAGATGTTGATTTGTCATGATTATCCATT TAAGATGGTAGATCACACATGGTTCAACATAGTGATGAAATATTTAAATC CTCGGTATGAGTTTATTGGTATAAAAACCATTAGAAAAGAATGCATGAAG GTGTTTGAATCTGAGAGAGATAGCCTTATGAAGGTTCTTAAAGGTGTGGA TAACATAGCTTTAACTACTGATTTGTGGACATCCAACCAAACACTTTCCT ACATGTGTTTAGTTGCACATTTTATTGATAAAGATTGGAAAATGCAATGT CGTGTGCTGAATTTCGTGGAGTTGGACCCTCCACATAGTGGAAATGTGAT TTCTCAAGCTGTGTTTGAGTGTGTGGCTGCATGGAAGATAGAAGATCAAA TCATTTCGATCACTCTAGATAATGCAGCCAACAATGATGTAGATGTCCGC AATTTGAAGGCTATGTTTGCTGCTAGAAGCTCCTATTGTTTTGTTCCTAA ATATTTCCATGTTCGTTGTTGTGCTCATATTATTAATTTGGTGGTCACTA ATGGGACTGCTGTAGGGTTCGCAGCATAGAAAACAAAAAATTTCCTACGA TGGGAACTATGTACCAAGATCTATCTACTAGATACAAACAACGGGCGGAT GTATATCCGTAGAGAACATACCCTTGAAGACCGACAAAGCTTAACGAGTT CAACTTGTGGTTGATGTAGACGATCTCTTGTCGATCTCAAGATCGAGAGG AAGTACTAGCGCCGCAAATTAGCAGCGCATCCGTGCTCGCACACACGTTC GAGGCACCGAGCAACCTCCGCCTCCTCGCTCCAGTGATGCAGCGGAAGCA CAACTCTTTCTTGCCGAATAGCCACCGGGAACATGTATCTCGCTAGTCCG AGACCATGGGGGATAAATTCTAGAGGGGGAGAGAGATCCTTCACGAGGAG GTGTGAGAGACAAGTGAGGAGGGGGGCTCCTTTTATAGGAGGAGGGGGGA CCCCAAGGGGGTGGCCAGCGCATGGGGGCAGCCCCCTTGACCTCCCCTCT TCATGTGGGTGGACACTCCCCTCACAAAATTCCTTTAAATTCCCTCCACT CAAAAGTCCACTCAAATTCCCATTAAATTTCCACCAAATTTAATGCAAAC TCTCATTAAATAAAACTCTTTTATTTTATTCAGAATTTTGTCAATTACTT TAATGACAAACATTCACAAATAACCCCTTGCTAGAATTCCATTTCACATG CATAACCACTTTATGCAATTTCACCCGAAAACCTGTTTCGGTATCTAGTG AAATAAATTCATGCGCTTGTTTATTCTTTCGGCATGAAACATTTGCTCCA ATTGGATGTCGGTGTCTCTTAAGTGTGTCACCCTACGGTTCGTGAATAAT GCGGACATGATCGAGACCCCTCTCGGATCAATAATTAGAAGCGGGATCTG GAGACCCATACTGACTCCCACACATTCAACGATGACTTTCTTGTGATCGT CCGAACCTTTTACGCTAGTATCTTAATCCCTTTTTTTCACTATATATTAC ATGTCCGAGATTCGATCATCGGTATCTCCATACCTAGTTTGATCTCGTTA CCGACATGCACTATTTTCTCATTCCCGTGATATAACATTCTAGTGATCAA ATCACTTGCTTGCAAGCTAATCAATGTGATATCACCGAGAGGGCCCAGAG TATATCTATCCGTCATCGGGATGAAAAAATTCCACTCTCGATCCATGAGC CTCAACATAACACTTTATTAGTTCTGAATCCATATTTATAATCACCCTGT TACGGTGTGACGTTTCATGTTATCAAGAAACTCTTCCGGTGTTAGTGATT GACATGATCTCATGGTCTAAGGATTAGGATCACTTCATAAGTTGTTATAG CAATATAAAATCAATGAATTTGATCGTAATGCTATACTTTGGATGAATGT TCATCACACCATTACACTAATGTTGTGATCCGTTATTAACAACATCCAAT GTCCATGATTAGGAAACCTTGATCATCTTGTTAATCAACGAGCTAGTTTA TGAGAGAGGCATAACTAGGAACTTTCTGTTTGTTTATTAAACACACATGT ATTAATGTTTCCGTATTAATACAATTATAGCATGCAAAATAAACATCTAT CATATACTTGGAATACACATAATAAACACTTTATTATTGCCTCTCAGGGC ATATTCCCTTCAGTCTCCCACTTGCACTAGAGACAATAATCTAGTTAAAT AGTGATAAATCTAACACCCATTGAGTTCTGGTGTTGATCATGTTTTGCTC CAGGGAGAGTTTTAGTCAACGGATACATTGAGATCCGTATGTACTTTACA AATCTTTATATCTCCATCCTTGACATGCTCGCGGATGGAGGGAAACCGGC GCTTAATATGCTTGGAATGCTTGTGAGACCTTGGTTCTTTGGCATTGGCA ATGGCACCATTGTTTTCACAATAGATCACCATTGGGTCCAACGCGTTTGC AACCACTCCTAGTTCGGATATGAACTCCTTCATCCAAACTGCTTCCTGAG CCGCTTCTAAAGCAGCAACATATTCGGCCTCCGGTGTTGATCCCGCTACC ACAGGTTGTTTGGAGCTCCTCCAACTAACCGCTCCGCCATTCATGAGAAA AACGTATCCGGATTGAGACTTAGAGTCATCCGGATCGGTGTCAAAGCTAG CGTCAACATAACACTTAGCGACGAGCTCTTCTTCACCTCCGTATACAAGA AACATATCCTTAGTTCTTCGTAAGTACTTAAGGATATTCTTGACCGCTAT CCAGTGTTCTGAACCTGGATCCGATTGGTACCTACTAGTCAAACTAATAG CATGTGCCACATCCGGTCTTGTACATAGCATGGCGTACATCATAGAGCCT ATGGCTGAAGCATAGGAGACTTTGTCCATTATCTCTCTTTCTTCCGCCGA AGCCGGACTTTGAGTCTTACTCAATGTCTTACCTTGCAACATAGGTAAGA ACCCCTTCTTACTTCCGTCCATTTTAAACTTCTTTAAAATCTTATCAAGG TATGTACTTCGCGATAGCCCTATTAGGCGCCTAGATCTATCTCTATTGAT CTTTGTGCCTAATATGTATGACGCTTCACCTAGGTCCTTCATTGAAAATT TGCTGTTTAGATAACTTTTAACACTGTTTAAAAGATCTATATCATTTCCG ATCAATAATATGTCATCCACATATAATATCAGAAATGCCACATTGCTCCC ACTCACTTTCTTGTAAATACAAGCATCTCCATAAGTTTGGACAAATCCAA ACTCTTTGATCACCTCATCAAAGCGGAGATTCCAACTTCGTGATGCTTGC TTCAATCCATAGATGGATCGCTGAAGCTTGCACACCTTGTTAGCATCCTT AGGATCGACAAAACCCTTTGGTTGTATCATATACAACTCTTCTTCAATAT TACCATTGAGAAACGCGGTTTTGACATCCATCTGCCATATCTCATAATCG AAATATGCAGTAATTGCTAACATAATCCTAACTGACTTTAGCATCACTAC GGGAGAGAATGTCTCATCATAGTCAACTCCTTGAATTTGTCGAAACCCCT TTGCGACAAGTCGAGCTTTATAGACGGTCACATTACCATCAGTATCAGTT TTCCTTTTGAAAATCCATTTGTTCTCCACGGCCTTTCGGTCGTGAGGTAA TTCCACCAAGTTCCAGACTTGATTTTCATACATGGATTCCATCTCGGATT TCATGGCTTCTAATCATCTGTTGGAATCCAGGCTCATCATCGCTTCTTCA AACGTTGCAGGGTCATCATTTTCATCAACCATGAAATTCATGACAGGATT TCCGTACAGCTCGAAGGCTGCACGCGTCCTGCTTGACCTGCGAGGTTCGG TAGTACTCTCTTTCGGAGTTTCATGATCATTATCATTAGTTCCCTCTTCA ACAGGTGGAGCCAACTCCGGAACAACTTCCGACGCTGCGCTACTCGCCAT ACTTTGAAGAGAAGGTTCAGTAACCTCTTCGAGTTCTATTTTCCGACTAC TCACACCTTTCGCGAGAAACTCTTTCTCTAGAAAGGATCCATTCTTGGCA ACAAAAACCTTGCCCTCGGATCTGTGATAGAAGGAATACCCAATAGTTTC CTTAGGGTATCCTATGAAGACGCATTTTTCCGCTTTGGGTTCGAGTTTAT CCGGTTGAAGTTTCTTCACATAAACATCGCATCCACAAACTTTAAGAAAA GACAGCTTAGGTTTGTTTCCAAACCACAATTCATACGGTGTCTTTTCAAC GGATTTAGATGGTGCCCAATTTAAAGTGAATGCAGCAGTTTCTAGTGCAT AACCCCAAAATGACAACGGCAAGTCCGTCAGAGACATCATAGATCGAACC ATATCTAATAAAGTACGATTACGACGTTCCGACACACCATTTCTCTGTGG TGTTCCGGCAGGTGTGAGTTGTGAAACAATTCCACACTCTTTCATGTGAG TGCTAAACTCGTAACTTAGATACTCACCTCCACGGTCGGACCGTAGAAAT TTGATCTTTCTATTACGATGATTTTCCACTTCATTCTGAAATTCCTTGAA CTTTTCAAAGATTTCAGACTTGTGTTTCATCAAGTAGATATAACCGTATC TACTCAAATCATCCGTGAAAGCAACAAAATAACGATATCCACCTCGCGCC GACACACTCATTGGACCACATACATCAGAATGTCTGATTTCCAACAAATC TGTCGCCTGTTCCATTGAACCGGAAAACGGCGTTCTAGTCATCTTGCCCA TAAGGCATGGCTCACATGTATCAAATGATTCATAATCAAGTGATTCCAAA AGTCCATCCGAATGGAGCTTCTTCATGCGTTTAACGCCAATATGACCTAG ACGGCAGTGCCACATATATGCGGATATATCATCATTAAGTTTAATCTTCT TAGCATCAACATTATGAATATGTGTAACATTATCATCGAGATCTAATAGA AATAAACCATTCATCATTATTGCATGACCATAAAAGATTTCATTCATATA AATGGAACACCCATTGTTCTCGGATTTAAATGAATAACCACTTCGCATCA AACACGATCCAGATACAATGTTCATGCTTAGTGCAGGCACCAGATAACAA TTATTCAAGTTTATAACTAATCCCGACGGCAAGTGGAGAGGTAGCGTTCC GACGGCGATAACATCAACGCTTGATCCATTGCCGACACGCATCTTGACCT CACCCCTTGCTAGCGGTCGCTTGTTCCGCAGCCCCTGATTCGAGTTATAA ATATTAGCAACTGAACCGGTATCAAATACCCAGGTGCTACTGCGAGCACT AGTCAAGTACACATCAATAACATGTATATCATATATACCTTTGTTTGCCT TGCCGACCTTCTTGTCTGCCAGATACTTGGGGCAGTTGCGCTTCCAGTGG CCAGTCCCCTTACAATAGTAACACTCGGTATCAGACTTAAGGCCAACTCG GGGTTTCTTTTCAGGCATGGCAACAGGCTTGCTGCCCTTACTTTCCTTCC GTTTTCCCTTCTTGTCTTTCTTGAAACCAGTGTTCCTATTGATCATCAAC ACTTGATGTTCCTTTTTTATCTCCACTTCTGCAGTTTTAAGCATTGACAG AAGCTTGGGGAGAGACTTCTTCATGCCTTGCATATTATAGTTCATCACGA AGCTCTTATAGCTAGGTGGAAGAGACTGCAGAACACGATGGATGCCTAAG TCAATGGGAATCGATAATCCCAAGGACGCAAGCTTATCGGCGTAACCCGA CATCTTGAGTACATGCTCACTAACGGAGTTGTGCTCTTCCATCATGCAGC TAAAGAACTTTTCTGAAGCGTTGTAGCTCTCTACAGCAGCATGTGTGTCG AAAATCATTTTCAACTCACCCATTGTATCAAATGCATTGCCATTTTCGAA ACGCTTTCGAAGTTCCGGCTCTAGCCCATATAATATGCTGCAATGAACTA AGATGTGGTCCTCCTGACGAGTCTGATAGACATTCTTCTCCTCGTCAGGG GCATCATCAAAAGGTGGGGGGCCTAACGGCGCTTCTAGCACATATTGCTT TTGTGAAGCAGAGAGGATAATCCTCAAATTCATGGCCCATTCGGTAAAGT TTCTACCGTTCGTTGCTAGTTTCTCTTTCTCCACGAACACATTAAAATTA AAAGCAGGTGGTGCCATCTACAACAGAATTTGTAAAGTTTAGACTAAGTG TATGATAGATTGAGTTCAACTAATCCATATTACAAATGAACTCCCACTCA AAAACGACATCCCTCGTGCCTTTTTGGTGATTACATGAACCAAATCCACT ATACCAAGTCCGATCATCACGTGAGTCGGTATAGCTTCAAAGGCGAGCAT CAAATGGGCATCATATCAACTATATGACTCATGCTTAACCTTTCGGTCCG TGTTTCGAGGCCATGTCTGTACATGCTAGGCTCGCCAAGTTAGAACCTTA GTATTCGCGTGTGTAACTGTTTTACACCCGAAATATGGTCGTGGATCCAA GAACACCCGATCATCACGTGATGTCTTGGAGCGACGAAACATAATCGGTG CATACTAAAGGAAGAACACATTCTTATCTTGATATTTAAATGAGGGATCA TCTTATTATGCTAACAAAGCGCTAAACAAGCAATATAAGATGCTATCAAA CATCACATGTTTATTAGTGAAATGTTATGGTTCCCGCATATGATCTCTAT CATGTGCATCGTGGTATGATCACTATCATACCTATATGTGTAAATCCAAG GTATATGGAGTTTACACACTATGTGTGTTGTAAGAGTATCATCTCATACT TCTACTTACAACACTACCATATCATAACACTAGCCCAGCAACAATCTAAA CTAGACGCCTCTAATTTATCCATTGCAAGTTTTACGTGGCTTAGGGATTT CGAGATAGAACCGTTCTTACCTACGAACATGAACCACAACGAGGATAATA AAATTGTTGACAACTCGCTTGCAAAATAGATATTGACTATAGTAGGAGAG ACAGACACCCGCTAGCCACTTATGCAAACTAGTTGCATGTCAAGCGTGGA ACAGGTCTCATGTGCGAGGACATGTAAAGTTTGTCCGGGCCGCTTCATCC CACTATGCCACCAATATACAAAATTACAACAAAGGAGCAACAACATGATC ATCATCGCCCACATACTCATATGTGTACCACCCATGTAAAGTATCTACGC ATAGATCCGGCTCTGATACCACTGTAGGGTTCGCAACATAGAAAACAAAA AAATTCCTACGATGGGAACTATGTACCAAGATCTATCTACTAGATACAAA CAACGGGCGGATGTATATCCGTAGAGAACATACCCTTGAAGACCGACAAA GCTTAACGAGTTCAACTCGTGGTTGATGTAGACGATCTCTTGCCGATCTC AAGATCGAGAGGAAGTCCTAGCGCCGCAAATCAGCAGCGCATCCGTGCTC GCACACACGTTCGAGGCACCGAGCAACCTCCACCTCCTCGCTCCAGCGAT GCAGCGGAAGAACAACTCTTTCTTTCCGAATAGCCACCGGGAACATGTAT CTCGCTAGTCCGAGACCATGGGGGATAAATTCTAGAGGGGGAGAGAGATC CTTCACGAGGAGGTGTGAGAGACAAGTAAGGAGGGGGGCTCCTTTTATAG GAGGAGGGGGGACCCCAAGGGGGTGGCCAGCGCATGGGGGCTGCCCCCTT GCCCTCCCCTCTTCATGTGGGTGGACACTCCACTCACAAAATTCCTTTAA ATTCCCTCCACTCAAAAGTCCACTCAAATTCCCATTAAATTTCCACCAAA TTTAATGCAAACTATCATTAAATAAAACTCTTTTATTTTATTCAGAATTT TGTCAATTACTTTAATGACAAACATTCACAAATAACCCCTTGCTAGAATT CTATTTCACATGCATAACCACTTTATGCAATTTCACTCGAAAACCTGTTT CGGTATCTAGTGAATAAATTCCTGCACTTGTTTATTCTTTCGGCATGAAA CATTTGCTCCAATTGGATGTCGGTGTCTCTTAAGTGTGTCACCCTACGGT TCGTGAATAATGCGGACATGATCGAGACCCCTCTCGGATCAATAATCAGA AGCGGGATCTGGAGACCCATACTGACTCCCACACATTCAACGATGACTCT CTTGTGATCGCCGGAACCTTTTACGCTAGTATCTTAATCCCTTTGTTTCA CGATATATTACATGTCCGAGATTCGATCATCGGTATATCCATACCTAGTT TGATCTCGTTACCGACATGCACTCTTTTCTCGTTCCCGTGATATAACATT CTAGTGATCAAATCACTTGCTTGCAAGCTAATCAATGTGATATCACCGAG AGGGCCCAGAGTATATCTATCCGTCATCGGGATGAACAAATTCCACTCTC GATCCATGAGCCTCAACATAACACTTTATTAGTTCTGAATCCATCTTTAT AATCACCCTGTTATGGTGTGACGTTTGATGTTATCAAGAAACGCTTCCGG TGTTAGTGATTGACATGATCTCATGGTCTAAGGATTAGGATCACTTTGTA AGTTGTTATAGCAATATAAACTCAATGACTTTGATCGTAATGCTATACTT TGGATGAATGTTCATCACACCATTACACTAATGTTGTGATCCCGTTATTA ACAACATCCAATGTCCATGATCAGGAAACCTTGATCATCTTGTTAATCAA CGAGCTAGTTTATGAGAGAGGAATAACTAGGAACTTTCTGTTTGTTTATT AAACACACATGTATTAATGTTTCCGTATTAATACAATTATAGCATGCAAA ATAAACATCTATCATATACTTGGAATACACATAATAAACACTTTATTATT GCCTCTCAGGGCATATTCCCTTCAACTTCAACCATCTCCCCTTTAACAAC CAATGTGAGGGAATCTGTTAAGTACATCAAGAAGTCGGTATCTCGATTGC ACTAGTTTGTAGAAATTTGTCGGTTTCTTGCAATCACAATTGGAGAGGGG CTGAAACTAGATGTGACCACAAGGTGGAATTCTACTTACCACATGTTAAA AACAGCCATTACCTATAGAGATGCAATAGATTCTTATGCGGACAGCGATG CAAATTATAAATGGAAGCCATCAAATGATGAATGGACATTGTTCAATACC ATTACACCTATACTTGCTTCTCTGGCTCTACATATCCTACTTCAAATATA TTTTACCCTCACATTGTCAATGTCAAGATTACACTTACAGAGGCATGTAG ATCCACCAACCCAGCTTTGAAAACTACGGGGGAGGCAATGTTGGACAAAT TCAACAAGTATTGGGAAGAACCCAATAATGTCATGGTGATTGCTACTATT CTTGACCCAAGGTACAAGCTGAAATACATTAAGTGTGGGTTTTAGAAAGA TCTATTCTGAAGAGAAAGCTACTACTGAATATAATTTGATCGAAACCGAG TTGGCAAAGCTGTATGACACTTATGATATACATCATCGTTATGAGAAAGC TGATTCTTATAGATCTGCTGCATCCTCATCTACACCTATGGATACAAGTT CATCTTTGCCATCAAGTGCCAGCGAGTTTACCTCATACTTAAGTGAGACT TCTGTGGAGACATCAAAGAATGAGATTGATAAGTATCTTGGTGAGGCAAA TGAGAGCTTGCTAAACAAAAAAAATTGA

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.