Query (optional)   in Class  

GrainGenes Sequence Report: AA039340

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Sequence
AA039340
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA039340
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
CTGCTCGCCTGCCTTCCTCCCTCAACCGCATTCTCTGATGCCGGCCTCCC
AGGGTCGAGATCACCGACATGCCCTCCTCTCTGTTCTCTACCACCGCTGC
GGGACCTCGCCGTGCGCCTCACCCCGAGCTCGCCAGCACCGCTCGGTCCC
TCCTCAGCACCCCGCGTGACCTCCCGCGTGCAGCCGCCGCCTTCCTCCCC
TCCAGCGTCCTCTGCAGCATGCTGCCCGACCTTCCTCCGCCTCTCCCGCT
GTCCACGTGGCCTCCTCCTCGCGCGCCTGCAAGGCCTCGCCGCCGCACTC
GCCTCTCCAGCGAGTGACCCGAGCTCCTCCGCCAGCGAACCCCACCGCCC
CGTCCTGCGCGAGCCCGAGCCCTACTGCCATGGGTTTCTTCCATCGCTGC
GCCAGCCCACCCCATCCTCTGTCCGCCGGCTGTCCTGCTCGCCGCGACCT
CCCCGCGAGGCAGCGCCGACACCCCGCACCATCGCGGCTTCCCCGACCCC
GCCCTGCTCTGCCGGCCTCGCTGCAGGCACCGCGACAAGCTCTGCATGTG
CTTGCTTCCTGTACGTGTTGCTCTTGTGCGTCTGATGTGCCCTGGTGCCT
TTTGCTCCTGGCCGATTGGTATTGCTAGAGTTGTTGCCGAATGATGTATG
TATGTGGTGTGGTGGTGGTGAAGTAGTAGTGGCAAATGGATGTGGTGGTT
CTGTTGGAGATATGCCCTAGAGGCAATAATAAATGTGGTTATTATTATAT
CTTCGTGTTTATGATAAATGTTTACATTCATACTATAATAGTATTAACAA
GGAAACATCGATACTTGTGTGATTTGTAAACTTAATAAGAAGTCCCTAGT
ATAGCCTCTATACTTCACTAGCTTGTTGGTTGATAGATGATTGTGGTTTC
CCTATCATGAACATTGAGATGTTATCAACAACAAGATCATATCGTTAGGA
GAATTATATGGTGGACATACTCCTATAGATAAGCGTAGCATAAAGATCAA
GTCATTTCATTAGTTCAATTGCTATATGCTTTCTGATACATAGTAACCTA
ATTCCTTCGACCATGAGATCATGCATATCACCTTTACCGGATGGATGCTT
TGATGACATCAAACACCACACCGTAACTGGGTGGTTATAAAGGTGGCATT
GAGTGTTCGGAAAGTATTGGTTGAGACACATGGATCAAGAGTGGGATTTG
TCCATCCACATGACGGATAGATATACTCTGGGCCCTCTCGGTGGAATGTC
ATCCAATTAGCTTGCAAGCATGTGACTTGGTCACAAGGGATCACATATCA
CGGGAACGAGAAAAGAGTACTTGTCAGTAACGAGGTTGAACTAGGTATGC
AGAGATACCGACGATCATAACCTCGGATAAGTAACATATCGTGAGACAAA
GGGAAATTGGTATCGTATGTAAGTGGTTCATTCGATCGCAAAGTAATCGT
AGAAATATGTGGGAGCCATATGAATTTCCAGATTCCTCTATTGGTTATTG
TTCGGAGAAGTGTCTCGATCATGTCCGCATAATTCACGAACCGTAGGGAG
ACACACTTAAGGATTCGACGTTGTTTGAGTAGTTATGGTATTATGAGAAA
GAGACCGAATGTTGTTCGGAGTCTCGGATGGGATCCGGGATATCACGAGG
TGATCCGGAATGGTCCGGAGAATAAGATTCATATAAGGAAAGTCCCGTTT
CGGAGTTGCGGAATGATTCCGGTGTTTTCATCGGGAATGTTCTAGAAGGT
TCCGGATTGTCCGGCACTCCGGGGGGGGGGGGGGGGAAGGGGTACATGAA
TGTGTCATTACTTATTGGAATGATTGCATCATGTACTAAGTGTTCTTGCT
GTCCCAAATAAAGGATTAAATTGAATCCTAAAACAGAAAAGTCAAATGTC
CAGTTTGAAAGTCAAACTGCCAAAAACAAGAAACTGTGGGAAACAAGCAA
GAGGAGTTGGAATCAACCTGGAGGAGGAGTAGGACTCCTCCAGGCCGGCG
CCCAGACCAAGGCCGAGTTGGGGAGGGACTCCTTCCCTCCCCTGGCGCGC
CAAGACCCCCCTCCCATAAAAGGAGGGGCAGGGCTCCTCCTAGACAACAA
CTTTCACCTCTAGATCTCCGGTTTAGAGCCGTTTTGGATTAGAGCTTCTA
ATTGCTTTAGCCAACGGTTTAGAGCCTTCTAATTGGTTTAGAGCCTTCTA
ATTGGTGTGTCTAATTACTAGACCACTAATAGCCTCTCTCATAAGCTCCA
CCATACTCGCACCGGCTTAAGGCGAAGCCCTGCGGGATTTCCCCTCTACT
TCCGGTACCACGCCGTTGTGCTGCCGGAATTGCGAGGAGAGTGCTACAAC
CTCCGCTGCCTGCTGGAACAAGGGAGAGGAAGGTCTTCGTCGAGTACCGA
ACGTGTGACCGACTGCGGGAGCGCTTCCGGAACGTGGCGCTGGAAGGATC
GTCTACACGATCTTGAGATCGGAAAGAGTACGACTACATCACCCACGAGA
ATCCGCTCTCGTTAAACGCTTTGGAATCTTCGAGGGTAAGTTATACCATC
GACTCGTTGCTACAATCTAGTAGATAGATCTTGGCTTGTTTGTTTGTATG
CGATAGAATTTTTTTGTTTTCCATGCTACGAACCCCTACAGTGGTATCAG
AGCCGTGTCTATATGTAGATCTGTTGCACGAGTAGAACACAATGGTCATT
ATGGGCGTTGATGCTTTTATTGTCGATTGCTTCTTGTGTACTTTGCATCT
TGCGGTATGTTGGGATGAAGCGGCCCGGGCTAACCTTACATGACATCGTT
CATGAGACTTGCTCCACGCTTGACATGCAACTTGTATTGCATAAGTGGCT
TTGCGGGTGCCTGTTTCTCCTAGCATAGTAAAGATCCAATACACAACGGG
CGATTAACAATACTTGTGTCAACGTTGTGGTTCATGTTCGTAAGTTAGAA
CGACACTTATTGAAAGCCCCAAACCACGTAAAATATGCAAAGAAAGTAGA
GGCGTCTAACTTTGTTTTGCAGGGGTGTGCAGTGATGTGATATGGCCATG
ATTGTGATTATATTTGATGTATGCAATGTTCCTTATTGTAAGTCGGCAAC
CGGCAGGAGCCATATGGTTGTCTTTAATTTATGTTAAGACCCGCATGTCT
ATTCAAAGTAGTTGTAATAGTTGAAACCGGTGGACGACAACCATGGAGAG
GCGTCATTGATCTTGATGCAATGCCGGTGATGATGGAGATCATGTTCGTG
CTTGAAGATGGAGATCAAAGCACAAAGAAGAAAGGCCATATCATATCACA
TATATATATTGAATTGCATGTGATGTTAATCCTTTATACATCTTGTATTG
CTTAGTAGACGACGGTAGCATTATAAGATGATCCCTCATGCACATGAATT
TCAAATCATAAAGTGTTCACCCTTAGTCAGCACCGTTGCTAAAGCTTGTT
GTTTCGAAGCACCACGTGATGATCGGGTGTGTTAGATTCCGCAAGTGTAT
ACAACGTGAGCAAGCCAGATTTGCTCATGCGGAAACTAAGGTTTGATCTT
GACGAGCCTAGCATGTACAGACATGGTCTCGGAACACGGATCACCGAAAG
GTAAAGCATGAATCATATAGTAGATATGATGAACATGACGATTGTTCGCC
ATTGAAACTATATCAACTCTCGTGATGATCGGTGTTGATGTAGTGGATTT
GGTTCGTGTGATCACTAAAACAATGTGAGGGATATTGTTTTGAGTGGGAG
TTCACCTAGTTTAATTACATTAATTAATTTGAACTCAATTTATCATAAAC
TTAGTCTAAACTATTGCAAATATGTTGTAGATCAATGGCAGCCCCTACCA
TCAATTTTAATGCGTTCCTAGAGAAAGAAAAGTTGAAAAACAATGGAAGC
AACTTCGCGGATTGGTTCCGCAATTTGAGGATTGTCCTCACAGCTGGTAA
TTTGACCTATGTGCTGGATGCACCGCTGGGTGACCCACCTGCAGCTGATG
CTCCCGATGAAGTAAAGAATGTTTACCTCGCTCGGAAGAATCAGTACTCC
ATAGTTCAGTGTGCTATCTTGTATGGTTTGGAATCGGAGCTTCAGAAAAG
GTTTGAGGATTCAGACCCATATGATATTGTCGAGGATCTCAAATTGATTT
TTGAGACTCATGCGGCAATTGAAAGCTATGAAGCTTCTGAAAAGTTCTTT
AACTGCAAGATGGAAGAAGGCAGCTCCGTCAGTGAGCATGTGCTTAAGAT
GTCAGGGCACGCAAACAAACTTCAAAGCTTGGGTATAGTGATTCCTAATG
CTTTGGGGATTTATCGTGTCCTCCAATCACTACCACCAAGTTACAAGAAC
TTTGTGATGAACTACAACATGCAGAACATGAACAAGACGTTGCCAGAACT
CTTTGCCATGTTGAAATCTGCAGAAGTGGAGATCAAGAAAGAGCACCAAG
TGTTGTTGGTCAATAAGACCACCAAATTCAAGAAAGGCAAGTCTAAGAAA
AGGGGACACTTCAAGAAGGGTGGTAAGAAAGCTACCACGCCGACGAAGAA
GACCAGGGCTGGACCTAAGCCTGATACTGAGTGCTTTTACTGCAAGGGAG
AAGGTCACTGGAAGCGGAATTGCCCAAAGTACTTGGCGGATTTGAAGAAC
GGCAACATCAAAAAGAAAGGTATATCTGATATACATGTTATTGATGTGTA
TCTCACTAGTACTCGTAGTAGTGCCTGGGTATTTGATACTGGTTCGGTTG
CTCATATTTGTAACTCGAAACAGGTGCTGCAGAATAAACGGAAGCTAGCA
AAGAACGAGGTGACGATGCGCGTGGGAAACGGATCAAAGGTTGATGTGAT
CGCGGTCGGCACGCTACCTCTTCATCTACCATCGGGATTAGTTTTATACT
TAAATAATTGTTATTTGGTGCCTGCGTTGAGCATGAACATTATATCGGGA
TCTTGTTTATTGCGAGACGGTTACTTGTTTAAATCCGAGAATAATGGTTG
TTCGATTTATATGAGTAATATGTTTTATGCACATGCACCTTTGATAGATG
GTCTTTTCTTATTGAATCTCGATAGTGGAAATACACATATCAACAACATT
GAAGCTAAACGATTGAAATCAAGCGATAATTCGACCTATATGTGGCACTG
TCGTCTTGGTCACATCGGAGTGAAACGTATGAAGAAACTCCATTCCGATG
GACTTCTTGAATCACTTGATTTTGAATCACTTGAAAGATGCGAAGCATGT
CTGATGGGAAAAATGACTAAGACTCCATTTTCTGGTATGGTGGAGCGAGC
TACAGACTTATTGGAAATCATACATACCGATGTGTGTGGTCCAATGAGTG
TAGCATCGCGCAGTGGTTATCGTTATGTTCTTACCTTCACGGATGACTTG
AGTAGATATGGGTATATCTATTTCATGAAACATAAGTCCGAAACTTTCGA
GAAGTTTAAGGAGTTTCAAAGTGAGGTGGAGAATCAACGTAACAAGAAGA
TTAAATTTCTACGTTCTGATCGTGGAGGTGAATATCTAAGTTACGAGTTT
GGCGAGCATTTGAAGAAATGCGGAATACTTTCACAATTGACACCGCCGGG
AACACCACAGCGTAATGGTGTGTCCGAACGTCGTAATTGAACTCTCTTAG
ATATGGTTCGTTCTATGATGTCACTTACAGATTTACCGCTATCATTTTGG
GGTTATGCATTAGAAACAGCCGCATTCACTTTAAATAGGGCACCGTCTAA
ATCCGTTGAAACGACACCGTATGAATTATGGTTTGGGAAGAAACCTAAAT
TGTCGTTCCTTAAAGTTTGGGGATGCGAAGCCTATGTAAAGAAGTTACAG
CCGGACAAGCTTGAACCCAAAGCGGAAAAATGCGTCTTCATAGGATACCC
GAAGGAAACTATTGGGTATACCTTCTATCATAGATCCGAAGGCAAAATCT
TCGTTGCCAAGAATGGATCCTTTCTAGAGAAGGAATTTCTCTCGAAAGAA
TTGACTGGAAGGAAAATAGAACTCGACGAGGTTGTCGAACCTTCTCTCGA
TATTGCGAGTAGCGCAGCACCGGAAGAAGTTCCTGTGGTGCCTGCACCAA
TAAGAGAGGAAGCTAATGATGGTGATCATGAAACTTCGGTTGAAGTTGCT
ACAGAGCCTCGGAGGTCAACGAGAACTCGTACCACTCCAGATTGGTATGA
TTCCGTTATGAATGTCATGGTGGTGGACAACACCGATGACCCCGAGACAT
ATGAGGAAGCGATGATGAGCCCAGATTCCAATAAATGGCAAGAAGCCATG
AAATCCGAGATTGGATCCATGTACGAAAACCAAGTATGGACTTTGGTGGA
CTTACCGGATGGCCGAAAGGCTGTCGAGAACAAATGGATTTTCAAGAAGA
AAATAGATGCTGATGGTAATGTTACTGTCTATAAAGCTCGACTTGTCGCA
AAAGGGTTTCGACAAATTCAAGGAGTTGACTACGATGAGACTTTCTCACC
GGTAGCGAAGCTAAAGTCTGTGAGGATTATGTTAGCAATCGCTGCATATT
ATGATTATGAGATATGGCAGATGGATGTCAAAACAGCATTCCTCAATGGA
GACATTGATGAAGAGTTGTATATGATGCAACCCAAAGGTTTTGTCGATCC
TAAAGATGCTAACAAGGTATGCAAACTTCAACGGTCCATCTATGGATTGA
AGCAAGCATCCCGAAGTTGGAATCAACGTTTTGATAAGGTAATCAAAAGT
TTTGGTTTTATACAAACTTATGGAGAAGCTTGTATTTAAAAGAAAGTGAG
TGGGAGCTCTGTAGCATTCTTAATACTATATGTGGATGACATATTATTGA
TTGGGAATGATGTAGACCTTCTTAATAGTGTCAAGGAATATTTGAATAAT
AGTTTTTCAATGAAGGATCTTGGCGAAGCAGCTTACATATTAGGCATAAA
GATTTATAGAGATAGATCGAAACGCCAAATATCATTGTCACAGAGTACAT
ATTTGGACAAAGTTCTAAAGAGATTTGGAATGGAAGAAAGCAAGAAAGGG
TTCTTGCCCATGTTGCCCAATACGACCTTGAGTAAAACTCAAAGTCCGAC
ATCGGCAGAAGATAGAGAAAGGATGAGTAAGACTCCCTATGCCTCAGCCA
TAGGATCTCTAATGTATGCCATGCTATGTACTAGACCCGACATTGCATAT
GCTGTTAGTTTAACTAGCAGATATCAAAGTGATCCAGGAGTGGATCATTG
GACAGCGGTCAAAAACATCCTTAAGTACTTGAGAAGAACTAAGGATATGG
TTCTTTCTTATGGAGGTGATGAACAGCTCGTTGTTAATGGTTACACCGAT
GCTAGTTGGAACACAGATCCGGATGATTCTAAATCGCAATCCGGATACGT
ATTTATTTTGAATGGTGCAGCAGTTAGCTGGAGGAGTGCAAAGCAAAGCG
TTGTGGCGAGATCTTCAACTGAATCGGAATACATGGCTGCTTCGGAGGCT
TCACAAGAAGCGATATGGATGAAAGAGTTCATTACAGAGCTGGGTGTGGT
TCCTAGTGCGCTGGACCCAATGTCTATCTACTGTGATAACATGGGCGCCA
TAGCCAATGCGCAAGAACCAAGGTCACACAAGAAGCTGAAGCATATCAAG
CTGCGTTTTCACGCTATTCGAGAACATATCCAGGATGGGGATATAAAGAT
TTGCAAAGTACACACAGATCTGAATGTGGCGGATCCGTTGACTAAACCTC
TCCCGAGGGCAAAACATGACCAACACCAAACTGCCATGGGTGTTCGGTAT
ATTACCATGTAATCTAGATTAGATGACTCTAGTGCAAGTGGGAGACTGTT
GGAGATATGCCCTAGAGGCAATAATAAATGTGGTTATTATTATATCTTCG
TGTTTATGATAAATGTTTACATTCATACTATAATAGTATTAACAAGGAAA
CATCGATACTTGTGTGATTTGTAAACTTAATAAGAAGTCCCTAGTATAGC
CTCTATACTTCACTAACTTGTTGGTTGATAGATGATTGTGGTTTCCCTAT
CATGAACATTGAGATGTTATCAACAACAAGATCATATCGTTAGGAGAATG
ATATGGTGGACATACTCCTATAGATAAGCGTAGCATAAAGATCAAGTCAT
TTCATTAGTTCAATTGCTATATGCTTTCTGATACATAGTAACCTAATTCC
TTCGACCATGAGATCATGCATATCACCTTTACCGGATGGATGCTTTGATG
ACATCAAACACCACACCGTAACTGGGTGGTTATAAAGGTGGCATTGAGTG
TTCGGAAAGTATTGGTTGAGACACATGGATCAAGAGTGGGATTTGTCCAT
CCACATGACGGATAGATATACTCTGGGCCCTCTCGGTGGAATGTCATCCA
ATTAGCTTGCAAGCATGTGACTTGGTCACAAGGGATCACATATCACGGGA
ACGAGAAAAGAGTACTTGTCAGTAACGAGGTTGAACTAGGTATGCAGAGA
TACCGACGATCATAACCTCGGATAAGTAACATATCGTGAGACAAAGGGAA
ATTGGTATCGTATGTAAGTGGTTCATTCGATCGCAAAGTAATCATAGAAA
TATGTGGGAGCCATATGAATTTCCAGATTCCTCTATTGGTTATTGTTCGG
AGAAGTGTCTCGATCATGTCCGCATAATTCACGAACCGTAGGGAGACACA
CTTAAGGATTCGACGTTGTTTGAGTAGTTATGGTATTATGAGAAAGAGAC
CGAATGTTGTTCGGAGTCTCGGATGGGATCCGGGATATCACGAGGTGATC
CGGAATGGTCCGGAGAATAAGATTCATATAAGGAAAGTCCCGTTTCGGAG
TTGCGGAATGATTTCAGTGTTTTCATCAGGAATGTTCTAGAAGGTTCCGG
ATTGTCCGACACTCCGGGGGGGGGGGGGAAGGGGTACATGAATGTGTCAT
TACTTATTGGAATGATTGAATCATGTACTAAGTGTTCTTGCTGTCCCAAA
TAAAGGATTAAATTGAATCCTAAAACAGAAAAGTCAAATGTCCAGTTTGA
AAGTCAAACTGCCAAAAACAAGAAACTGTGGGAAACAAGCAAGAGGAGTT
GGAATCAACCTGGAGGAGGAGTAGGACTCCTCCAGGCCGGCGCCCAGCCC
AAGGCCGAGTTGGGGAGGGACTCCTTCCCTCCCCTGGCGCGCCAAGACCC
CCCTCCCATAAAAGGAGGGGCAGGGCTCCTCCTAGACAACAACTTTCACC
TCTAGATCTCCGGTTTAGAGCCGTTTTGGATTAGAGCTTCTAATTGCTTT
AGCCAACGGTTTAGAGCCTTCTAATTGGTTTAGAGCCTTCTAATTGGTGT
GTCTAATTACTAGACCACTAATAGCCTCTCTCATAAGCTCCACCATACTC
GCACCGGCTTAAGGCGAAGCCCTGCGGGATTTCCCCTCTACTTCCGGTAC
CACGCCGTTGTGCTGCCGGAATTGCGAGGAGAGTGCTACAACCTCCGCTG
CCTGCTGGAACAAGGGAGAGGAAGGTCTTCGTCGAGTACCGAACGTGTGA
CCGACTACGGGAGCGCTGCCGGAACGTGGCGCTGGAAGGATCGTCTACAC
GATCTTGAGATCGGAAAGAGTACGACTACATCACCCACGAGAATCCGCTC
TCGTTAAACGCTTTGGAATCTTCGAGGGTAAGTTATACCATCGACTCGTT
GCTACAATCTAGTAGATAGATCTTGGCTTGTTTGTTTGTATGCGATAGAA
AATTTTTGTTTTCCATGCTACGAACCCCTACAGGTTCGGTGTTGCAACAA
CGAAGACTCTACGAAGATGGATATGATTGTACGGTGGTGAGGTAGGAACA
TGGTGAAGCCACCCGAAGAATACCAAAGCCCGCTAGTTCTCCGATCTAGG
GGTTTTGCCAAGACCTTCCGAAGCCCAACAACCCTGAACAAGTTCGCCAC
CAACACTTGAAGCGGGAATCCAAGATCCTCAAGACCCCGAGTGCAATGAT
CCCGAAGACCGAACCTAAACCCTCGGAACGAAGATCTCCACCGGTTCGAT
GCCAAGATCTCCACCAGTTCGGTGCCATGCCATGGATGCCGACAAGATCT
CCGTCACGGACTGAAGGCCGACCCCGCTGAGCCCAAACCTCGTCGAAACC
CCGAACCAAGATCGTCAATTCGACATGTGCGGCCCCTATCCGAGACCCTC
ATATTTTTATAATATATGACTTTGTTGTTTGTGG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.