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GrainGenes Sequence Report: AA041497

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Sequence
AA041497
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA041497
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
CTCGATTCAGTTCGTCGGTTCCACTTGCGCCACCGCTCTTCGCCTGCCGT
GCTCTGCAGCCTCCACGATGTCGCCCACCGCTTCTCACCCTATCCCGTCC
CGGGACGCTAAATCCTAGCACCTCACCCCCTTCCCTTCCTCTCCCCGTCA
AGCCGGTCCTCGGTTCGTGCCGCCGCAGCGGCGAGCTCCCCTTCTCTCCC
AGCACGCCTGCTCGCGCCACCCGCCGAATAAGGTGAGGTGACTTTGTTGT
TCTGGAAATGATGATTTGCGGCGATGCAATATGGGGTGGGCTGACTTCTG
TGTAGTTCTGGAAATGATGATTTGTCGGCGATGAGGGCTAATCCATATAG
AAGGCGGTTGTAATCGTCCTTCACGCATGGATATAGCAATATTCCCTCGA
ATTTGGCAGGTGTAAATGATTAGGGAGTGCCTAGATCTCAGGCGCCTGAG
AATTAGTTATGTCTAAGTCGCTGATGTCATACTAATATTTGTGCTAATTC
TCAGTTGCAACCTACTTGCAACTCATAAGATTTGTACTAGTTCTCAGTTA
CAACCTAGTTGCAACTCATTAAATTTTCAGTTACACCCAAGTTGCAACTC
ATGTGTAGCACGAATCACGAGGTAAATCAAACGGTAAAAGAGGCGACTGA
GACTTAAGAAGTTCTCAGGCGCCTGAGAACTAGCAAATCCGAAATGATTA
ATGCTACTGAATGCAGCTAGTGCCCGAAGACCTCCGGATTTCGGTGTGCT
CTGTTATGTTTCACCTTCTTAGCTGCACCTGGGTCTGCCATTTCACTGTG
TGTCCATTTATTTTGAAAACCTTGGAAATGTTCAGGCTTCAGATTTCAAA
GTAACTTATCCTAACATATTTCAAACTGGTTGTACTATTTCTGCTGGTTC
TGTCAGTCATGTACTTTCTAAGTACCGTTGCGCCCCACCGGTACCTTTTA
TCTTAAAAATACATGGAAAAGACTTGCATTCTTAAGCATCCGTGTTAGTT
TATATGCTCAACATTGCCCTACCAGAATTTTGCACATCATGATATTCAAT
GACATCATTTGACATGTGGAGTACTGTTATGTTGTTGGGACTCGATCACG
ATCCATGTGAACACTAATGTATGAATCATTTGAAGTCTTTTCCTTGCTCT
TTTTCAGTTGGTCGATCATTTGCAAATCCAGAAAATTGGGCTCAAAAAAA
ATGTATCCTTGGGAGATTGAGTTGCCACAGAAACCAAATATCTGTTACCA
TCAGTCTTAACATTCTTTCTTATGAAGGACTGTTAGGTAACGGAATTTCA
GATGCCGTCCATTCGGGAAAGTCGGTTTCAGATCATGCAACTAAAGGAGC
TGGCTTGGAAACTTTAGCTAAACATCAGCTGTTACCTGGTTTAATTAACC
GTGGTTCTGGGAACGAAAGGTTCAAAGTTATTTCACCATTGGGATCTAGT
GGTGTGTGGCAAACTCTTCGCTTTGCAAGCACTAATGCAGCTAGAAGGCC
CGAGTCTGACAGTGACAATGGACACGAGAATGATCAAGACAGGCAGCAAG
ATAAAAAAGCACCAATGGAGGACTGTGTGGACTCTACAGGAGAACTTGGT
ATTGCCAACGCCAAATCCGAAGTTAAGAATCAAGAACAATCGTCTACGAG
AAAAAAGTTCTGGGCAAGTGTTCCTGTGATTGGTCCTGCAATGGAAGTAG
TCCTTTCCGTGAGCAGGTGGTCAATCATCTAGTTGATCTTCGCTCATTCA
GAATTTCAGACTAGTTTGAGTTATTGAATATTTTAATCAGGAAGCACTAC
TCTGTTCTTAGGGCTGATTGGACTCTTAATTTCAGTCACAAGAAGGACGA
GCTCTTTTCAACGTTGCAGCACTATTGGCTTGGCTTGCGACTGCTTTGGC
TAGATGTTCGGATTTCGTCCAGATTAATGATGAAGCTAGCCAATGGGAAA
AAACTCTCGAGAAGAGAGAGGAGTCAGCTGACCCGAACAAGTGCAGACAT
ATTCAGGCTGGTCCCCTTTTCGGTTTTCGTCATAGTCCCTTTCATGGAAT
TCTTGTTGCCTGTGTTTCTAAGGCTTTTCCCAAACATGCTGCCATCCACA
TTCAAGGACAAGATGAAAGAACAGGTATGTGGAGTGTGCCATCTATCCTA
TATCGATGTGTTAGGTAGGCGAGATGGGGCTAAACCGAGCAGCCTCCACC
GGTCCTGCAGCAACCCTAACATGATGTTACTCTCTTCTGAATTTTAAATA
GCATGTACTGTACCACAAATGAAGGAACCAAGCTGATGGAAGTGTAAGTG
GTTAATGCGTAGTAGTAGTATCTAGGAAGAAACCCTAATCATTTTATTGT
ATAAAATGAATAATGTGGATGGATAATAGTTACTTTCATTTATTCAAACG
GCACATTCTTTTATGTTTTGCTACTTGTTTTTCTTTAACTAAATGGCCTG
CTTTTCTGAAGAAACGCTGAGCTGTTTTAATGTCTATCTATGACATGACC
AATGGTAGGAAGCACTAAAAAGAAAACTCAAAGCAAAGATGGAATATGCC
AAGTTTCTACAGGACATTGTGAAGGAAATGGCAAAAGAAGTGAAATGTAC
ACATAATGGAGAGATGAAGAAGAGGGCGGAGGATATTGATCAATTTATTA
AGAAAGTATTAGACTTCCCCATATATCCGTTTAGTGATTCATGTTTACTG
CATCATTATTCTGGGTGACTTGGATCTCTCAGTATTTATGCAAGTTTTAA
ATGATTAGGTAAGGACTGGTGCATATGTTGATAATGGTGAAATATTGAGT
TTTGCAAAGTTATTCAGTGATGAACTGGCCTTGGAGAATATGAGCAGGTT
ATTTTTAATATTTATGGTTCTTAGATTACGCCTTGTATCTTCATATTTCA
TGACGTTTAGGTGCTTGATATAACCTTACAGGCCAAGCTTACTGAATATG
TGCAAGTATATGGGGATCCAGCCATATGGGACAAATAATTATTTGCGCTT
TATGCTCAGAAGAACTAAAATGGTGAGTGTTTCTATGCATCACATTACAT
CAGATGCAGTGTGTATTATAGCTATTAACTATTAGAAGAAGAAAATAGCG
CTAGAAGGATCGTGCAGAACTGCATATCGAGTTTGTAGTAGCACTTCCGT
GTTTGATCACCTGGTTATTATTGAGAGTTAGATATGCAACCTGTTATGAC
AGATGAAGTCAACAAAAGCATTTTTTAACATCAGGATAGTAATGTGGAAA
TTAAGATACTAGCTATCACAAATAAAATTATTGTATTGGAGCAAATTATT
ATCGTATACCAGGCGATGGATTAAAACCTCGCGTCTAATTGTTGAAGTAA
TTACCGATGGAAAAGTCCGCATAGCATGTTGCGTACATGATATATTGTCT
AATGTTTGGGCCTTCTTGTGCAGTGTGCACTCTGTGTCATATACATTTGT
TCCCCTTCTACTTCCAAGATCCAGTTTACTGATAACTTCTGATTACTCAG
TTATTGGAATCATAAATTTGTAGAAAATGGATCATTAGAGTTTAGCTAAG
ATAAGTTAGCTAATATGCCTGTGTTTCTGTTCAGTATAAAAGATGATGAT
ATGTTAATACAGAGAGAAGGTGTGGCCTCTCTCACTGAACATGAACTCCG
TCAGGCCTGCAGGGAGAGAGGCCACCTTGGTTTGCTTCCAGTAGAGGAGA
TGCAGGAAGAGGTGATCTCACGAGTTCTCTAGTTATCATACAATAAATAT
CTGCAGCCATTTTATATTCAGCAATGGTTTCCGGTCGAATGATTAAAAGG
TTTTCATCGCTTTAGAGTAGCAATATTGAATTCAATACGTGTTCACCCTA
GGATATTTTTGGTACATCTATATCACTCGAGGACAATGAACTTTTTACCT
TCTTCTCTCTCTGCCCAGCTGCAAAATTGGTTGGACCTGTCTCTCTATTG
TGATGTGCCATCTTCTCTCCTCATACTATCTAGGTGAGCAATCTTCGGAT
TTATTTACTTATTGCTCTACATAGATTCCCGTGTAACAAATATATTAACT
TTTTAAAGCTGGCAGAGTTGCCCTGTTTCATTGGCTGATTATTATAATTT
TTGTAGAGCCTTCACACTTTCTGGCAAGATGAATCCTGATGATGTTGCAT
CTGCACTATCATCGCTTCGTGACAACATATTGGGTAACGTGTGTATTAGC
TTGCCATCTGAAGATGCTCTTTCGGCTAGGAAGAGGAAGCTGGAGTTCTT
GAAAATGCAGGATAGACTTATCAAGGTCATCTCAACCATATAATATTTCC
TTGCAAGTAAAACTACTTTTACTTTATTTTAACCTTTATTTTAGATAAAA
GGCATCTCGGCTTATCCTTTTACGTGTCCATATGACCATATCCATTTGCA
CCCACTTCTATTGATAAATAACTATGTTTCGTGCTCTTTTTCCCGGTCTG
TTTTCTGGCTGCCTTTTGGATTGAAAAATGAGAAGTTTTCCTTACGCATG
TTACAGGCAGAAGAAAATGAACAAGAGGGTATGTTGAAGTTGGAAGATGA
GAACGATGCATTCCGTAAACTCAGTGTCAAGGAAGCCAGTGATCTAGCAA
GGAAGAGCTTCGCAAAATTAGCCAGGCATTAGTTCTTTTGTCTTTTGCAT
CGGTAAAATTTCAATAGAATATTATTTGTTTGCAGACGACTGCGACTTAC
TTAGAGCAAAGTACTGGATAGTTATTGAACACCTGTTTGTTGATTTTATT
TCCTTTGCAGTCGATTAGCAAGGAACGTCAAGAATTCCTGAGCCTTGTGA
ACAAAGAGGTGAGACTATATCTTATCGGCGGTAGAAGTATGCAGTTGTGT
TCAGTTCACAAAGTGCTTGTGAGTTTTATTTGATGGGTTTCCTGTCAACA
CATTATTTTTTTCATTGTGCAGATAGAGCTGTACAACTCCCTGGGTGAAG
ATTCTACAACAGAAAATGCTAACGAGTCATATACAGCCGCGAAGGGGACT
AATAAATCAGCTAGGAGTTCAGTATCCTCAACATTGATAAAAAAGGTATT
TGGTCATGTGAACTGTTAGTGTATCAGGTCTTTGAGAAGTGCAGTGGTGT
TGACAAAAATTGAACCAACCAATTTGGATGTCATCATGAGTTTAGGCCTG
CCTTTCTGTTGAATAGATATCCAGATCGTGGTAATTTTGTGCAGCATGGT
AAAGTTACTCTGTTTATGTCTTTGTCCTGCCTATTTGTATTTTGCAAATT
CTTGTGCTTTTGTTGCAGATAAATGCGATGCTCAAAGAACTCACAAAGGA
AATCGATGATGTAGACACAGCCATCGGTGACGGTTGGCAGCTCCTCGACA
GGTAAAGTCACGTCTTAGGAGGTAGCAGCTGCAGCCACGTACCTGAAGCA
CAACCTTGACAATGCAGGCGTCGAGGAGCTCATCGGCAGCCTCTCCAAAG
ATAATAAAGGTAACGTCACGGTATCTAGCTAGCGCTCCACGTCGAGACTC
AAGAGCATACTTACTTTGGTCATGTTTATCAAATACTGCTGCTGTGTCTA
TGTTTGGTGTGCAGAGGGGAAGATCCTTGTTGTTGAAGACATTGTGAAGC
TTGGCACGCAAGCCGAGGAGGCGGAATCTGACGACGGTGAGTCCACGAAT
GACCTCCGTGTCTAGTAGTAGGGTTCACTAGAATCCATGAAAAAACCCCA
TCTCTTTTTGTGACGACGACGACGACGACGCCGCCGCCGCCTACCTTGTT
CCGGCCCGGGATGACTCGTCGGCCGAAAGAGATTTGTAAACTCTGAAACT
GGAAAGCCATGTACTCCTCCTCTGCATTTTCGGGTTTTCACTCGCCGGCG
AATCGGCCTCCACCACGCGTCGTACATAATTTCTCGTGTCCCTGCCGCTC
TGCATTGTGTCATGGATGATGACAGCAGCGGTGTTCCTGTGCACGTAAAT
TCGACTCAGTTCAGATGTATGCTCGCACGCCAGTTGCTTGGGGTACCGGG
ACGAGACAAGAGGAAGGTCCCTCTCCTGCACGACGGAAGAACCAAAAAGA
AACGGATCTCTGGGATCTTGGGAACACCAGAGCGAGAACGAAAGCACAGG
TACCCATCTCCAACCCCGAATTTCTACCGTAAATTTTATTCTGTTGCCGA
TAATGCATATATATTCCACTGACTCCTGTCGCTGCAGATCCGAGGACGGT
ATATTCATTCATCGGTAGCTGTTCGTCCGCCGTGCACAGATGGGCGGCGA
GCCGAGCCAAGCCAAGCACGCCGCCCACTGCTTTTCTCCCTCCAACTTGA
CCAAGTAGGCGCCGTATCCCCTTGTGGACCCACTGCCACACAAGCAATCT
ACACTGGCTCCTGTCAAAAAAAAAAATCTACACTGGCTGGTAGGCCCACC
TTCCAGGCTCTTCCAGTTCTGACTCTACGTAGGAGTGTTCCATGGGACCT
AGGACCACGGTGCAGTGAGAAAGCGTGCGTCCTTTCTGTTCCGGACCGGC
TCGCTGGGCCTGGGCGGCGCCGGCGTCCGCGCACGTGGCGCGATCTTACT
GGTCCGGACGGCGCGTCCTTTCCACGTGAATGAAAAATACATGGGTCGGC
TCGGCTCGGCCCCGTCCTACTTGCCGAATGCTACCTCTCGCCTCCGTCCG
TCCATGACAGGCACTGTGCTGTCCGCGAGCGCTTTTTCTGCGTTGTCGCG
ATGACATGCGGGGCCCGGCTCTGGTGGGGAACCCGTGTCAGCCACGCAGC
TCGTGTCGTGCCCCCCTTTGGCCTTTGCCCTGCCTGCGTGGGCGTGTGGC
CAAGTGGGAGAGAAGGCCATCCAGGCTTCTTCAAAAGCCTTTATTTCAAG
AAGAGTGGAGACTGAAGGCAAGGAGCGTGGTTCTTCAGTCTTCTCTTCCT
ACCAGACTCACTTCTTCTACAGAGACCTCGGGGGCTGGATCACTAGAGGC
CGGTTCCAGGTGAGTACGCAAGCTCTCTGGTTTCATAGAATCGAGGTTCC
CTTTCGCGTCTTCCTTCTTCTTCCCCGTTGGTTTTCTCTCTCTGACGGTC
CAGAGGATAGGAGGGCCATGGCTCGTGTGTCAGTGTGTGAGGACCTGAAC
GTTCGATCATCTCCTGCTCCTGCTCCTTTTTCTGTGTGGGTTAAGAATCA
TTTGATCGGCCGCAAATCTGAGACCCTTTTAGCAATTCTTGGTTTCTTGT
GCTGGGAACTGGAATTCCCTAAGAATTCAGAAAATAGCCTTCCTGATTTC
CTTCTTTTATTTGTGGGTCCTAAGAATTCCCTCAGAATTCAGAAAGTTCT
GTTGGACATGAGCTCTTAGAATTAGCCTCAGATTATATTATGAAAGTAAA
TACTAATATGCGTATCTCTTTTAACTCAGCGTTATAGAGTAGCAGCGGGG
TAACACTTAATTTCTGCCCTCTAAAGATTCAGAGTCTCATTTATTTGCTG
GAGCAAAAATTAATGAAATTTATTTTCTTCCTTCAAAGGACCCAAGACAT
CAAGTCATTAATAATGGACCACCTGCCTTACGTACGTTATGCCCTTTCGT
TACCTCTATCTATTTATTACAGCATCTTCCTGAACGTGCCTTGAACAGAG
CACTGCTGTACTGTATTTGCGCTGCCATATGGGGCCATAACTGGATTTTA
CAGCACAAAACTTGAGATTATTGTGTATTGACCTTTCTTCTGTCTGATTT
TTGGCCTCTGGAGTACCGGCAGCAGGAGGCACATGGTTGATGGCGCCCCT
GGACTCAGGTTCTTCAGAAATCTTCTTCAGCAGCAGTGTGATCGACAATG
CATTTGATATCTATGAGTGCAATAGCATGGCAGACGCGAAATCCGTGGCA
GATCATAGCCGGTATTCTCAGCCTGCGTGCACTAATCCGCCTGATCCACC
CCCACTACCTGGGACTTCTTATGGCAAAAGGAGAAATTCTAGGAATGGAA
AGGCGTGTCGTATTCATGTCCCTGAAGATGTCCAGGACTCCTGGAACAAG
CTGTTCTCGGAAGGGTATCAAGCCGATGTTCGTGTCTCGACAGATGATGG
AACCACGATTTTATCACATTCATGCATTCTTGTAAGTACAGGTTTCTGAT
TCTTTTCCTATATAAATGGACATTCCTAAAGCACTTGCAGGTCCTGATCG
ACCTTTCATCTCGTCTTGTACAGGGCACCAGATCTCCTGTTCTAAGAACT
ATGCTGGAAGAAGCTAGAGTACAACATGGTTTCAGACTTATCCTGATTTC
TGGTGTACCATCACAAGCGGTTCATGTCTTCATCAGATACCTTTATTCTT
CATGGTATGACTGCATCCTATAAATTCATTCTTCTTTGAAAGGTTGGAGT
GTCTTGATTATTTCTTTCACATGTTAATGAAAATGCCTTGCAATCAATTA
TACGTGAAAACTTGCAAATCCAGGCCAAACATTTTGTAACTGCTTGTTCC
GAAGTAAGGAGAGAACGAAATTCTTATACTTCTGTATAATGCTATCATGC
TGCTCTGTGTATCATGTATTTATGTCCCATGTTCAGAGGTGGTTGTACAC
AAAACCAGTTGTTTGCTCAATCATTTCTCAGTGATTAAAACTAAACGCAA
TGTAGGCTGTATTCAGAGTTGAATGTTTATGTTTCTTCAGAGTTTTGAGT
ATGCCCATATTTGACTACAAGAGATAGCTTGATAAAACCTTGTCATTTAT
GTTGTTTCTCTGGTGAAGTTTTCAGCAGGATGAGATGAAGAAATATGCTG
TTCATTTGCTTGTACTATCTCACGTTTTCTCGGTACAATCCCTGAAGATT
GTCTGCACCGACCAACTTGAGAGATTTTTTCTTTCTTCCGATAACGTGGT
AGACATGCTACAACTGGCTAGATTGTGTGACGCATCAAGGCTCTCGCTCA
TCTGTACTCGTATGATCATTGGAGATTTCAAGACTATCTCTCTGACAGAA
GGGTGGAAGGTGATGAGACAGGTGAACCCAAGCCTAGAGCAAGAGCTTCT
CGAGTCTCTTGTTGAAGTGGATACAGTGAGTTCCCTGCAACAGAGAATCC
TAATACGACTTAATCGTTGGTTAATCCACCTTGCATCATCTCAATCGTTC
AATTTGCTTGTCTCGCTATATGTTATGTGTATGATCTTGCACACAATGAT
CAGCTCATATTTATATGTTTATCATGGTTCACAATCATCATTCTCAAAAC
TGAATTTGGCGCAGAGAAGGCAAGAAAGAGCTAAAAGAATGGAGGAAAAG
AAGGTTTATCTTCAATTATATGAAGCTATGGAAGCCCTTGTTCATATATG
CCGAGAAGGGTGCAGAACAATTGGCCCCTGGGATCAGAAACTGAAGGGTA
GCCAAGCTGTTTGCAAGTTTCCTGCCTGTAAGGGTGTTGAGCTGCTGGTG
CGCCATTTCTCAGCATGCAAATTGCGGGTGCCGGGTGGCTGCGCCAACTG
CAAGCGCATGTGGCAGCTTCTTGAGCTGCATTCTCGGATGTGTTCCGGAC
CAGAAACCTGCAGGGTTCCTTTATGCAGGTGAGGTCTTATCTTTGTTGGT
CAAATCCATTTCACTGAGGCACATAAGTCAGGATTTTCATAGGTTAATTC
AGCAGTTTGCTGTCATAGCATCTCATAATATTTTTAATCCTCCATTTCCA
AAAGGGGTACCTTCCTGGCTTCATCTTCATAAACTACAGCTAGCAGGACT
TACCAGATAGCAGATATGGAGGAACTTTTGACAAATATAACGATTAAAAT
TCAAAATTCCCGAAGAAGATGCTGCACACATACACACGCACATATTCAAA
ATTCCTTATGTGTTATATACACTTCATTGCTGTACTGTTTTACACGTTGC
AGGCATTTTAAAATGAAAATGCAGCATCTGAGCAAGAAAGAAAAGATCAA
ATGGGACCTTTTGGCGTGTAAGGTGCTAGAGAGCAAAGGAACAATCAGTT
CCATCCCAGCAAGGAGAAAGTTAACATCCAAGGCAATTGGAAATTGCCCT
GTAATTTGACAGTAAAGATGTTCCTTCGGACATCTAAAGCATGTAATCAT
GTTTATAGTATCTTTCAGCAAACTCAGGGAACTGCACTGGTTATTACTAC
CGTGGACCATTTTACTGCGTATGTATCACACATCGTCTTTCTCCATCCCT
CGCCACAGCCAGGCAAAGCTCGTGTGGCACGGGGCAGATTGTTTTCTGGA
TCTATTAGGTCGAGCGGCGAGCGCATGGAAGTCAAGCGGGCAGAACGCGG
ATGAATCTGATCAATATGGCCTGACTCGGCTTGCGGATTGCAGATCCAGC
AGCCACCAGCCAGCTTAGTGTTACAAAGTGCAGAGCAAGATTGTGTGTGC
TTCATAGTTTGAAGATGTACCTTCGTGTGCAAAAATGTAGTCTTAGAAGG
ACCCACTTCAGTCCAAGAGCTCTCTAGCCGATACCGGATCCCGCGGTGCT
GCAAAACACGAATGCGGTGTACTGTAAAACCTGTTTTGTCCAAAAACGAC
GACGCGGAACAGATTCTGCATATGTATGCCGCAAAGACATACAATGCGGG
ATCTATTTCGTGCCGACGTTCCGCACAGCAAAAC

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.