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GrainGenes Sequence Report: AA040050

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Sequence
AA040050
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA040050
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
ACCAGTTCGAAGCATTCCCACCACCGGCAGCAGCAGCAGCAGCGCGCGCT
CCCTCTCAATCCCGCCGCCGCCACCGCCGAAGTAGTACCAGTTCGCCGGA
GAAAGAAGCAAGATGGCCGGAAGGAAGGGAGGCGACAGGAAGAAGGCGGT
GACCCGCTCCGTCAAGGCTGGGCTCCAGTTCCCCGTCGGCCGCATCGGGC
GCTTCCTCAAGAAGGGCCGCTACGCGCAGCGCGTCGGCTCCGGCGCCCCC
GTCTACCTCGCCGCAGTCCTCGAGTACCTCGCCGCCGAGGTAACGTCCAA
CCACCTAATCCCCTCCCCGTTCTTCGATTCCTGCTTCGGCTCTGCTTTCT
TGCTATATCGGTCTCCGAACTCTGTTCTGTTTTCTGAACTTTGTCCTGTT
TTTTTTACCGTCCCCAGGTCCTGGAGCTCGCCGGAAACGCCGCCAAGGAC
AACAAGAAGTCCCGCATCGTGCCGCGCCACCTGCTGCTCGCCATCCGCAA
CGACGTCGAGCTCGGCAAGCTGCTCGCCGGAGTCACCATCGCCCACGGCG
GCGTCCTCCCCAACATCCAGTCTGTGCTGCTCCCCAAGAAGGCCCTCGAG
AAGGCCGAGAAGGAGCCCTCCAAGTCGCCCAAGAAGAAGACCGCCGTCAA
GACCCCCAAGAAGAAGACCGCCGCCGAGTAGTAGGGTAGCGTAGGTCTAC
GATTGCTGATGCATAGTCATGGAGTGAAAAGTGTCGTATGTGCTTGGAAG
GAGGGAGGGCAGAATCTGTTTTGGTTAGATTAGTGGTGTATGTAATCCTG
GTTCACGAGACAACACCTGGTTGTGGTTGATCCGATTTCTTGCTAATGGA
AGCCGAAAATTGAATCGATCCTTCACCTGGTCAATCTTTCTTTCAAGTTC
CTTTACCCCAACTGCTCTTACTTGATTGGATCTGGGCCGTGATGCGATTT
CCATTTTTCTTTATTTTCTTTGTGTTGAGGCTGATGTTGCAATATCTAGC
TTCATCTGGATGTGATTGCTTTTTTTTCTCACGGGGTATGATTTGTGGGA
TGTGGGTTGGTTCTATATAAGGATCTGGGGATTATTTCTAGGGTTCGTCG
GTGATGTTTAATCTGCGAGGGAAACGGGCGCCCCATGCTGCGATTCCAAT
CGGGAAACTGATAAACCGGAATGCTACTTTCTCCTCATGCTCCAAGTTGT
TCGTCGGAGGTATGATTTCGCAGATCTTTTGGACATCCAGTGCTGAGTCC
GTGGTCAATTTGCATGATCCTTGGAGCCGAATCTCTTCTTTGTTTGAGTC
CCAACCTCCTTCTCTTTAATGCTATACTGAACTATCCTGCCTCTGATTGC
AATATTCTGATGAAATTCTTGCAAATGCTGTGTCCAATTTTAACTGAATA
TAAATGTTACGAAGGACCTGTGTGAACCATTCTTGCTTCAATGCTAGATT
GTGAACATTGATATAGTTCAGAGTTGATGTCCTGGTATTTGTTCCACTGA
CTTGAGTTGCAGGCCTGTATGCTCCTGCTGTTCAGGATGTTTTGGCCTCA
TTTTGTTTGATTGCTTGAACCTGAATCTCTTTTCTGTTTGAGGTGGGATG
GGCTTCCTGTTACATACGGTTATTTGCGGACCTACTTAGGAAGATGATTT
TCATGCTAGGTTGTCGACCATCTGGATTGAAAAATCTGCTAGAATCATTC
TGGTTCATGCTGGATTCTGAACATTGATACGGTTCAGGATGTGTGTTGAT
GCCCTGCTATTTATTCCACTGAATGTTGAGTTGCAGGTCTGTCGTACGAC
ACCAATGAGATTGCTATTTGTTCCACTGAATGTTGAGTTGCAGGTCTGTC
GTACGACACCAATGAGATTGCGCTCAAGGATGCATTCTCTCAGCATGGCG
ATGTTATTGAAGGTGGCGAACCTATCTGTTCTTGATATTCTTAGTTGTCG
ATCTGTGTTTTTTTTTAGAGATTGACCTGTAAAACTGATGGATGTGTGAC
AGTGAAAGTGATATGCCACCCGGTGACGGGGAGATCCAAAGGATACGGGT
TTGTCAGGTTCTCTTTGGAAACCTAAGCAGCCGCAGCATTGGAGAAGATG
AGCGACAAGGTAAACCATGCTTCATACATCTGTAGTCCTGTAGATATAAC
GCATATCAAGTTCCTGCAGGATAGTATGCAGTTAGCACTCAGCGTGCTAA
CATGGCTTTCCTACATGATGACAACCGTTTAATTTTCAGGTGCTTGATAG
TAGGAACATACGGGTGCACTACGCACACCGCGGATGATCTGCTGCTGCTA
CTGCTGTAGATATCAGTAAGGTGATCTGTGATGTTAAATCATGTAGTATT
ATATATATATGTTAAAATCTATGGTGTTGAACAATTCATGTGCTGATCTT
AGAATTTGAATGTCATCAAGTCTCTGTCCATCCAGTAATTTTGTATGCTG
CAGCATGCGTGGCATGTTGTATCTATTCACATTACATACTTTAAGTCCAG
TCTTATACTCATTGCTTCACCAATAGCCTAGTTTTCAGTTTTTAGCTTGG
CAATGCCCGTAGCATCTTGGTTGTTGACAACTGAGAAAAAACAGAGGAAC
ACATGATTCCCCAGCTAATTTTCTTCCACTAAACACAAAATTATTTGCAA
CGATTGTTTGGGGTTCTGGGTCAGTGTTAGCGCTGGGTTGTGAATTATTT
GACCGCGTTTGGGAGCAAAATTGATGCCCTGGTTTTAAAAAGCTCCATTA
TGCCCTGACCCTAAGAAACTTCAGGAGGCAGAAGGCATGGACATCAAGAT
ACAGTCCTTGACTGATTTCAGCTAAGTGACCGGAAGGAGCTCCTTGCAAC
CAGTCAATGCATATATGCTGTATAATCAGGGCGTACCGAGTCTCCTCTGT
TCAAAACAGTCTCCCCTTCATTCTGAATAAACAGCAAGAAGACACCTGAC
TGGCTGAGTAGGAACCCAGAACTGATGCATTTTAGGCATGGAAACTTTGC
CCAAAGGATCCCCTGCTCCATTTGTCATGGAACATTGTTGCACAAAGGGA
ACCGTTTCATACACGGCTACATGGAACCAATTGATACATGGGGAAATAAC
TGAAATGAATTTGCTTATGGCAGACACTAGGAGAAGCTTCATTCTCTAAC
AGGCTCTGGTGTTGTACAACTGAACTGTAACTCTGTAACTGTTAATTGTA
CCTGAGCAGTAGAGCTATGGGATGGAGCATTACCGTTAGAGAGATCAAGT
GTTACTGGGAGACCTTATGTTGTGCATCCGCATTTGTCCGGTAAATTTTT
ATCTGGAACGTTGTACCGTTTCATGTCATTTTGTCGAAGAAGCTGTGTCG
ATCTGTCCAACTTCATACGATGAACAATGTGTTGTCATAGTGGAGACTGA
TGTCCAGCACCAACATGTTAATTCTTCGGCTGTTATCCTGGTACATACAC
TGCTGAAAATTCACAAGGAACTGCCTAGCTTCTATAAAAAAACTTACCGT
CGTGGGTTACATTCGTGGCTATGGATAGTTTCCATGGGCCATTGCCCAAT
AGCCCATTCAGACCCTAGTGTGAAACTTTCTATCTCCATCGACCCCACCT
ACTCTACCACCACACTGTTCTAAAAAAAAAACTCCACCACCACACAGAAC
GCCTCGTCGTCGCCGACGCCAACGGTGACGATGTGGCGGTCGGGGGCCGT
GCTCTTCTCTCGTCGCAGCCAAATCCACTCTGAACCTTGGTCCAGACTAT
TATAATAGCGACAAGCAAATAACGAAGAACGAAAAGGAAATCACGGCAAG
GAAACACCGATCTAATGTGGAAAAATCTCTTCAACAAATAAAGGATAAAA
CCACGGGCGCCGTATTTACAAACGCTAGGAATTTTCTCAGATACGACTTA
TCCCAGCCGACGGCTTACAAGAGGTTTATATGGTGGTGGAAATCTAGATC
TTCAACGATCCATACCACGGGGAGGGGGCGGGGCTTCGCCTCACTCCCCT
ACCCCCAGGCGTCCCTGTTGGGCACGGTTACAGGACGGCGACGGGCCGAA
ATAGAGTGAGTCTGGAGTTAGCCTTCTTAATTAATTTGGATCATACTTCA
ATAAACTCCATCTTAAGATACATTTCTTCTTGTAGCATCAACAACAATAA
TCTATCCGAACAAACAAAGCAACTACTTTTAGGGCCAATAGCCACTTGGG
CTAATCAATTAAACCAGCTAAGTTAAAGAAAAGCTCAAACTTAGCAACAT
GAACATGTTTAGTCATCATATCAATAGGATTATCATGAGTGTTGATATTG
CATACCTTTAGTTTACCTTGAGCTAACAAAATGGTACTTGACATCAATGC
GTTTAGTTCTCTCATGGAGCATCTGGTATTTTGTAAGGTACATGGCATTT
TGACTGTCACAAAACAAAGTAATTCAAGAATTATCTCCACAAAACTCAGC
AAACAAACATTTCAACCAAACAGATTCTTTATAAGCTTCAACAATAGCCA
TGTATTTATCTTTAGTAGTATATTGTGCAACAAGAGCCTGCAACGTAACC
TTTCAGCTAACAACACAGGCACCAACATTAAACACATAACTTGTAAGGGA
TATTCTCTTATCCAAATCAGCTACAAAATCTGAATCCACATAGCCAGCGA
GGCCCTCACCGGTTCTCTCAGACTTCAAACAAGTATCGGAAGTGTCAAGA
AGGTATCTGAAAACCCACTGAACAACCTTCCAATGTACTTTATCAGAATT
AAGCATATATCTACTTACCAAACTCATAGCATATGATAAATCAGGACGAG
AATAAATCTTGGCATACATCAAAGAACCAACGGCACTAGAATTCGGCCCA
AGCCTCCGGCGACGGGTCTCGCTCTGCTGATCAGAAGTTAGCCTCCTTAA
TTGAATTTGGATCATACTTCAACACAGACTCCACCCCACGCCTTCTTCCC
TGTTTCCTCTCCTCCTCCTCCTCGCAGGTCCTGGATTCTGTGTGCCATGT
CCTCCTCGCAACCGACCTTCACCGACAACCTCAAGGTCCCCTCCCTCGTT
GTTAATAGCAGCACCATGCATATTCTCGAGAGCCACACGATCCACATTTG
CTTGAGTGCAATAAGCTTCATCTGCTTGATTCTTCCTAAAAAGGAAAGAC
ATCTGCAACTAAAATCCTTAGTAACTACCTAGCGCATTTTTCTGCATCCA
TCCTATAAATTTGGATTTACATTGATGTAACTATTTAACTCGTGGTACCA
ATGTGTGTAGTAGTGGCATTCTAGAGGGACTCGCCATCGACGGTCTTCAC
CGGCAAGGTGATTCATGTCTCCCTTTCTTGTTAATATAAGCATCGATGGG
AGGTTTATGGAAGCCATATGATCCACATTTCGGTCCCGTGATGAAACCTG
ACGAGACGCCTTTATGGTAGATTCCGCTAGTCGCAGTCAAGAGTCGAAAT
AGTCCTGGCTAGGGATCGTTAATCAATTTGAGATGCAAATGGTTGCTAAT
TCCATGTACTATCATGTTAGTTGAGTACTTGATTAAAGATTGAGGGTTTT
TAGAGGTAGCTAAAAACTGACACAAGGTTGAAGACAACAACAAGCCACCT
ATAGCCACACCTAGTAGTTATAGTCATGTCCTCTCTCCGAACGACAACAC
CTATGGAGGAGAAGGGGAAATGAAGACGAGTTCTCGATAGGAATCTCAGT
AGGGACGGTCAGGGTATACACTCCAACGATACATCCGGTGGAGTCCCGAG
TAAAGACTCTAGTTGGTTGAATATCTACTTGGGAGGACGATGTGGTGCTT
TGCAAAAGGTACCCAACAACAACAGCTTGGGGACATGCCGCAACATAAGC
TGGCGACAATGTCATGACCCGTCAACAATGCAGCCATGACAACATGATGT
GATACAGGGAAAATCGACGACAAAATGCAAGGTAGTTGATGTCTTACTGG
CAGGTGGGTCTAGACAACGACTAGAGCGTGTTGTACCTGTGCTCACCTGT
CATGTGGGCCAATAGTGGAGAGGGATATAAACACCGTTAACACGACCGAT
GGATAAGAATTAATCAATAGGAAAAGCCGTCCTCTTCTTTGTCCCACCCT
CTCTTATCATGAACCTCCTTCCTACAACCCCGACTTTCCCTCTCAATTCT
CAGATCCAATCCAGCGAGTAGCGAGGGTATGACACATAGCTCCGTGTGAC
TAAAACACGCATCTTATCGTCGTATGATCTATGTGTTCCAATCCCTTTCA
TGCTCAAGAGTGCAAGAATTTGATCACATTGAAGTGTTTATGCACGAAAG
GAACGAAGCATCATGTTAATCCATTTATGCACGAAAGGAAAGTAGCATGT
CATTAATAAGCAAATAATCCAGTCACGAGGATCCTCTTTCCCGCGGCTCC
CAGATTTGGAATTTCGTTCCCCCTTTTTCCACCGCGAGAAAAAAAAAAAC
GAAACGTGAAGCGCGAAATCGCTGCGCTCTGATTGGTCCATCCACTGCTC
CCACGGATCGTGCCCAACCCGGAAGCAATCTCCACCGCAGATCCAACGGC
AGCCACGCGGATCGAGCTCCCTCGCTGTGCTATAAAACTCACGCCATCCA
GGCCCATTCGTCCCACCAATTCAAGCCGGCAACAGCAGCAGCAGCGCGCG
CTCCATCCCAATCCCGCCGCCACCACCGCCGCAGTTCGGTTCAGTTCGCC
GGAGAAGGAAGCAAGATGGCCGGAAGGAAGGGAGGCGACAGGAAGAAGGC
GGTTACCCGCTCCGTCAAGGCCGGCCTCCAGTTCCCCGTCGGCCGCATCG
GGCGCTTCCTCAAGAAGGGCCGCTACGCGCAGCGCGTCGGCTCCGGCGCC
CCCGTCTACCTCGCCGCCGTCCTCGAGTACCTCGCCGCCGAGGTATGTGC
AACAATCTCTCTCTCGCTCTGTTGTTCGTTCCTTCGAATTCCCGCTTGGA
CTCCGCTTTCTTGTTTGCTGTCGACACGGGTCTGTTTCTGAACTCTGTCA
TGTTTTCTTCCTCCGTCCTCAGGTCCTGGAGCTCGCCGGCAACGCCGCCA
AGGACAACAAGAAGTCCCGCATCGTGCCGCGCCACCTTCTGCTCGCCATC
CGCAACGACGTGGAGCTCGGCAAGCTGCTCGCTGGAGTCACCATCGCCCA
CGGCGGCGTCCTCCCCAACATCCAGTCCGTGCTGCTCCCCAAGAAGGCCC
TCGAGAAGGCCGAGAAGGAGCCCACCAAGTCGCCCAAGAAGAAGGCCGCC
GCCGTCAAGACCCCCAAGAAGAAGGCCGCCGCCGAGTAGTAGGGTAGCCC
CCGCTGTTGCGTTGCGTAGGGAGTAGTTGTGTATTGTTTGGCCTCGGGTT
CTTGCTGAATGAAGTTGAGAAGTTAGTGATCTACCTTTGTGTTAACTGCT
TGTTGAATGTCCTTCGGTTACTTGATTGGATCTGTTAGTCATCTTGGTGC
GCACTATTGATTTCTGAATCTGTTCCTCTGTTTCTCTCTGTCGAGGGCAA
TCTTGAAATATCTAGCCTTATCCCGGTGCGAACTGGTAGTTTTCATGGGC
AGTTGTATGGGTTGTGCGATGTTGCTCATGTGATTTGGGGGTTATTTCTA
GGGCTCGCAGACGATGTTTAGTTGGGGAAGCAGAGTCGCGATTCCAATCG
GAAAACTGCTGAATCAGAGCGCTGCTTTCTCCACATGCTCCAAATTGTTT
GTTGGAGGTACGATTTTTTTCGTTAGTAGATCTCACACCCGTCTTGTTCA
GTTTCCTGTCAAATTGTTCGTTGTTTGGGCATGGATCTCTTCTCTGTTTG
AGATCTGCTGTGCTCCCTGTTTGCATTTATTTAATTTAGGAAGATGTGTA
TTGTGAATCATCCTGCTTGCTGATTGAAGCGCAGTGCATTTCTCTGATGA
AATTCGTGCAATTGTTTCCTTCGATTTTAACTAGCACATGTAAATGTTAG
GAGTAATCTGTGTGCAGCGTTCTGCTTTCATGCTAGACTAGATTGTCAAC
ACTGATATGGTTCAGGATGTTTTTGATGCCCTGCTATTTGGTACACTGAA
TGTTGAGTTGCAGGTCTGTCCTATGACACCAACGAGATTGCTCTCAGGGA
TGCATTCTCTCAGCATGGTGATGTTGTCGAAGGTAGTAATCCTTCCGTTC
TGGATCTTCTTGGTGGTGGTTGATCTGTGATTTTTGTTGATCAGGAATTT
ACTTCAGATTGGTGCTTGTGTTTGTGGCAGTGAAAGTAATATGCCATCCG
GTGACGGGGAGATCTAAAGGATATGGTTTCATCAAGTTCTCTTCAGAAAC
TGAAGCAGCTGCAGCATTGGAGAAGATGAGCGATGAGGTAGACTGCGCTA
CATACATCTGTAGATAGATATAGCACAAGTCAATTTGTTGCAGGATACTG
TGCAGCGCTGGGTGTGTTTCTTTTTTCTTTTGCTAACACGGATTTTCCTA
CATGATGGCAATTTTTTGATTTTCAGCTGCTTGATGGTAGGAACATACGG
GTCCAGTATGCAAACCATGGTTGATCTGTTGCTGCTGTTGACACGAAGTA
AGGTGCCTATTTGATGTTGTTTCTGTGATGTTAAATCATTTATTATGCAT
GTTCAACTGTTGGCACCCTTATCTGGTCCCAGGGAAAATAGCTGTGCATC
CAGTAGTATATTATGTATGCTGCAGCAAGCTTGGCTTACTATTTAGAGTG
CCACTGGCTCTTTAAATTAGAGCCTTTTTTTGGCAAATTTATTTAGGGGG
CAGCAGTAAATTTTAGCTTGATTTGAGAAACTTTACCAGCAGGAGAGTTG
TATTTCTTCAAGCACGCATGAACCTGTAGAGATTCACAATGGAGAAATTA
TACTATGAATCATCTCATATTTTACTAAACAAGCCAGTCATGTGATGCAA
GGGAGCCTTCTTTGTTTGTCCTACTGCCTTCAAGGAGCTGTAGGCCTGTA
GCTCAACTAGTATAGGAGTAACACAGAACATGAACCTGAATGTATATGCT
TATATTGTAATTTTTCAAATAGTTACTGTTAAACTGCAGGCCGTCATCAT
AAATTGGACTTTTGGAGTCCCCAGTTAGTAGTTTCATGATGCTCCTGATG
GCTTTCAGCAAAGCGAAACTTGGCTGTAAACCATTCTTTCTATGAAGAGG
GATAAAATAAGAGTACATAATAGATATTTCCACTTAGCAGGCATGATATA
ATCTGAAAACTAAGCAATATAAACAGTACCACATACCCATCTTTTATGCC
AAATTTTGCAGATGGGTGGTTGAAGCGATTGTTCTTATTGAGGAATAAAC
AATCATACAGTTGGGGGTTTCTTCCTTCAGTATGCACCTTAATTTTTGCC
CAACAGTATACTTGCCTCAATCGCATGACTTGGTGCACTAGCTGCTATTG
TTGTTATGAACGTTTCAGTGGTAGAGCTTGATTTGAGGTTGCCACCTATA
GAGGGACTGAACAGTACTAGTCACTAATATGCTTACTACATCTGTTACTG
TGAGCCTTCTCATGTAAATGAGCTCGAAAGGTTATGTGCATATTTATACA
TCTGTTATGAACCTGTGGTTTCAGTTCAGTTTAAACTATGATATCAATGG
TCTTTTAGTTCTCCTATGCAGGTACAAGCTGCCAATCATATATGCTGATG
AAGAAGATGATGATGCTGGAGATTTGGTTGGCAAGCGTGCCCATATGCTG
GTTGTGCAATCGGTAGGATTAGCTGGAGCATTTACTGCTTGGGAGATCAA
ATCTTATTGGAAGATATTATGCTGTGGACGTCACTGCATCATTTTGCCAA
GATGGCATTTTATTTTAAGTTGTATACATTGTTATCCAGAATGCTGAGCT
GAATCATCATGCTTGCTGATTGCAATCACAGTGCATTATTCTCGTTAAAT
TCTTGCAAATATTGCCTCCAGTTTTAACTGAATGTGAAATGTTAGGAACA
ATCTGTGTACATTCTGGTTTCATGCACAATACAGTCTGAACATTGATATG
GTTCAGGATTTTTTTGTTATTTGTTCCACCGACTAGAGCTGCAGGTCTGT
CCTATGACACCAATGTGATTGCTCTCATGGATACATTCTCCCAGTACAGC
GATGTTACTGAAGGTACTGATCTATCTATCAGTTCTGGATCTTCTAGGTG
GTTGATGTGA

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.