Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA001624

[Submit comment/correction]

Sequence	AA001624
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA001624
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	CCCGCCCCCTCCATTTCGACCAAAACCAAACCAAACCCTCGCCTCGCCGC CATGGCCGGCGGCGCCGCTCCCCTCTCCACCGCCCGCGGCGGGTACCGCC TCAGCGCCCTCAACGACGACCTCCTCCAAGAAATCATCACCTGCCTCCCC GTCATGGAAGCCGCCCGCACCGTCGTCCTCGCCAAGCGCTGGCGCTACCT CTGGCGCTCCGCCCCGCTCTTCCTCGACGATGGGGACCTCCCCGAGCCCG CGCGCGATGCCGTAGTCCCCCGAGTACTTGCCGAGCACCAAGGCCAGTTC TGCTCCGTCAGCCTCGCCGACTGCAGGCCCACCTCCCTGGACCGAGAGCT CCCCGGGTGGCCGCTCCTCCTCGTCGACAAGCAAACCCAGAGGCTCCATC TCAACAACCGTTTACCCCGGAACCAGATCGACATCTCGCCGCACATCCCC GCCGACATCCTCCGCTGCGGCTCGCTCGAGGAGCTCTTGCTGGGATTCTG GACGTTCCCCGTCGACCTCTCCCACGGCGTCGGCATCTTTCTTCCCAACC TCCTGGAGCTCACCTTGATAATGGTTGTCATAAGCGACGAAGTCCTCGAG CACCTGATCACTGCCTGCACCGCTCTGGAGACCCTAGAGTTCACCAGCAT AACACCAAAGCGCGTCCATCTCCGCAGCCAAAGCCTCCGATGCGCGCTCG TTGGGCTATCCAGGGTGGAAGACTTCGCGGTGGTGGACGCGCCACTCCTG GAGCGGCTCGTCTTGTATCCGCCGGGTACTGCTGTGAGGGTCAAGATTGG TCATGCAACCAACCTGCGGGTGCTCGGCCACCTGGATACAAGAGTTCATC GGCTGCAGATCCGGGACATCGTGATCCAGGTACGGCCATACTGCTATCTC CCTCTCAACATTGATCCATTCAGCATGTTCTCCTCCGTGGATCATAAATC AGTCAATGAGTTGTGATAATATTGGTTTTGCTGCACCTCATTGCAGTATC TCAAAATTATTCCATCCACATACATTGATCCATCCATATCATGATATTTT CTATGATCATGGAAGACTTGATGAGTAATGATGCCTACCTGTCTTGGTAG TCCGGATTGCAGCCTAACACAATGGCGAGCACAAGCACTGTGATTCCAAG CGTCAAGATACTGGCTGTGACGGTGAATTTCGGTGTCCTCTGGGAGGTCA AGATGCTGGCCAGCTTCCTCAGATGCTTTCCCAACATTATCACCCTGCAC ATCGAGGTAGCTGCAATTTCCTTCACTCAGTTGATCATCATTCTTCAACG GCATCACCAATTTTTAGCAGCATGATCCATAATATGCATGTAGCTGAACG GTTCACACTCATTTTTTGCAGTCTGCCCTGCATAATCCGTCTGTATCTGC CAGTGCTATTGAGCCCAGTGGGGAGCACCATGCCAAGTTCTGGCAGGAGG TCGGTCCGGTTGAATGCTTGAGATCACACGTTCTCGGGAAGATGGTCATC CACAAATTCCGAGGCGATCAGAACGAATTCGAATTCCTCAAGTTCGTCGC CACGAATGCCCAGGGGCTGCAGTCTCTGCATGTTGTGTTGCAAGAAGGAA ATACTTCTTCGGCTGACAAGGTGAATGAGGCAAAAGGTAAATTGCAGGAT CTACGGTTTCAAACAGGGATCTCTGGGGTGCTGCTGGTGTTGCCTAAAGA GGGCATCCTTTCGACCTTGCAGAAAGCAACTGATCTTTCTTTCGATGACC CTTTTCGCTTCTGAATGCATGGTTAATTCACCACCTGGTTGATATGGCTG AATGCATGGTTGAGCCACTCCTGTTTGGGAATCGCTGACTGTTCTCTGCG AGATGATGTTGTTTAGTTTGTAGGTATGCCTTCTCTTGAGAGATGGTTGA TTTCAACTTGTACCATGAATGAATGCAAGAGTTAAAGCTAGCCAGAAGTA CCCGAAATACTAGTGTTGTTTTCATCTGTTATGCAATATTCATGTGTTGG TATTATAACAGCCATGTGCTTCTGAATATAGTGCTCTGTTTTGTAGCATG CCTGCGGTGTCATTTGCTTTGCTTCTGTCAATTCAGTTCATTATCATCAG ATGTTTAGGATATGCTGAGCTTGTTTGACATGTTACCTGCCTCTTCTCTG TTCTTTATAGTGACCAGGAGGACCAGGATTTGTTCCATTTTAATTATTGA TGTACATCAGCTTTCGTAGACAGGATCAGGACGACAAACGGTTGGCATCC CCCATGCCGTATGATAGCTCGGCTAGTTAAGTTATTATTGTCGATCAGAA GCTGATCTTCCGTAGCTGTAAGTAAAACTCTCCATGCTCGAAGATGAATC CCTGCGTGAACAATCTACTAGGTATTGTGGTTTTTTAGGGCGTCTGTTGC AAGTGAGTAACTTGGTGCTCGTAACCCTCCTGGTGTTTTCAAGCATCCGA GACGCAAGTTTTCTCTTCTTTAAACTAATGAACTGTTGTAGATTCACTAA TGTATGCAAGGAATATTTTTCTGCACAAGTGGCTCCTGACACCCTGCTAA GTGAAGCTGCACAGATACTGGCAAATGGAAAGGAAGCAAATATAGTACAG TACTGTATATTTTTCTGATGGTGCTGTCTTTGTTCAGGCTTGCTCTTTCC CCACTGATTTTGCTCTCCAGGAGGAAGCACAATACTCTGGTTCTTGCATA ATATTTGTTTCTTTACCGATTGCCAAGTGCTAGCTGGGGTGGCGAAAGCT GTCAACCTTCGTTCTAATCATGGATGCTAGGCCCCTGCTTGCTATTTTCA TGAATGCTACGGCTGCAGAATCAGATAAGGTCTTCAAGATTCGGAGATCC TCCGACAGAAGTAGCTCATGCTCTCGCCAAAAGATATAGTGGTAGAGATC GCCAAAAGATATGTGATTTTCTCTGTAGAAATGCACATGTCCTGTACACT GTTATGTGCTAGTATTGTTTTTGCTAGTTTAACGGTTGCTAGAAATCTTC ACATTGAGCTGCTAACTACTGTAGCAAATCTCACATGTCGAAAATATCTA AGTTTAGCATAATACTACTGCGCCTTTCGCTTTATTGTTAATGTTCAGGT TTTGTTTTTGTTTTTTGAAATGCGGTAGGAGTTATGTTCAGAAGTTTTTC GAAAGCTCACAACGGTCACAAATTAATTCAATGGCTTAAACAAATGACTT ATATTAAGAATATCAAGCAACAATGGCATCTCTTTATTCTCGTAAATCCA CTTCTGATGTCATGTGCATAAGCTCCCTTTACCAAAATAACACATTTTAA ATTGTTAAAAAACTTTTAGAAAAGTGCCCACCGCGTGTTCGTCTTCATAT TCTATGTGCTCACATAAAAGTTTCATGATAACCCCATTGTTTCGTGGGTC GTGTAAAAAAAATCACTTGCAGAGCATTATTTAGTTTTTAAAATATTCTA CGTGCACCAGGCGTATGAACTGCAGTGTTGAATCTGGTGTCAATCTAGTT TTTTTAAATTATATAGTTGATAATTTGTTATCTATCCTGCGTGATGAATT TGCGTACTGCAAATGGAGTTTAAGTTTACAGTAAACTGCAAACAACTTTT GTGCATTTGCGTAGATGCTGCAATCGACCGGTCTGCTTCGAAAGAGGGTG AGTGTCGTGTCAAATAGGAAATGCCTCTTCTAGAGTTGCTCTTAGAGCAT CTCCAGCAGATGCTCTATATTTTGGCGCTGTAAAACTTGTTTGCAGTGCG TTTTATCCACTTTTAGCGTGCGAGACAGACAACACCTCCACCGAAAACTC TAAAAACATAGCGCGCAAAAGTATCACTTCATCATGCGCTCTAAAATAGA GCACCAAAAACACCTTTTTCCAAATATGTGTGTCAAAAGAAGATAAAAAA GGACCAAAAAAATAGACTGAAAATCAAACACAAATTTGCTAGCATGTTGG AAAAAAAATTGGGTCCTTATCTTCTCTAGCTAGCACATTGGAAAATCGAC GAGCTGAGCAAAATCGATTCATGAGTGTGTGCACCTGCGTCCAAAATCGA TTTATACAGCGCGAGGAGCGCGCGGGCAGGCAGACCGCCGGGCTCCAGCG GCTAGACGGTGTTCCCGGTGGCCGTGTCGGTGGCGGGCGAGCTGTGCGCG AGGCCCCTAAGCTACGCCGTGCGGCTGGTGAAGGAGGCCAAGGGGGAGGT GGACGTGGAGTACATGCGTTCGGTGGCGTTCCCGGGCAGGCGGACCGCGT TTCCGGTGGCCGTGTCAGCGGCAGGCGAGCTGTGCGCGAGGCCCCTGAGC TACGCCGTGCGGCCGGACGCAGGCGGCGGAGCCGGGCGCGAGCGGCGAAG GGACCATGTGCGGCTAGACAGCGGAGGGCCCATCTGCACGAGCGACGGAG TCTACGAAGGCGCGGCGGCCTCGTCGGAGGACCAGCGCGAGGAGCGACGC GAGCAGGTGCGACGGAGCGGCGGAGGGCCCATGTGCAGCTAGACTGCGGC ACGAGCGGCGGAGGGTCCAATCCATCTACGAAGGCGCAGCGGTCTCGTCG GACGACCAGCGCGAGGAGCGACGCGAGCGGAGGACCAGCGCGAGGAGGTG CGACGGAGCGGCGGAGGGCCCATGTGCGGCTAGACCGCGGCACGAGCGGC GGAGGGTCCAATCCATCTACGAAGGCGCGGTGGCCTCGTCGGAGGACCAG CGCGAGGAGCGACGCGAGCGGAGGACCAGCGCGAGGAGGTGCGACGGAGC GGCGGAGGGCCCATGTGCGGCTAGACTGCGGCACGAGCGGCGGAGGGTCC AATCCATCTACGAAGGCGCAGCGGCCTCGTCGGAGGACCAGCGCGAGGAG CGACGCGAGCGGAGGACCAGCGCGAGGAGGTGCGACGGAGCGGCGGAGGG CCCATGTGCGGCTAGACTGCGGCACGAGCGGCGGAGGGTCCAATCCATCT ACGAAGGCGCAACGGCCTCGTCGGAGGACCAGCGCGAGGAGCGACGCGAG CGGAGGACCAGCGCGAGGAGGTGCGACGGAGCGGCGGAGGGCCCATGTGC GGCTAGACTGCGGCACGAGCGGCGAAGGGTCCAATCCATCTACGAAGGCG CATCGGCCTCGTCGGAGGACCAGCGCGAGGAGCGACGCGAGCGGAGGACC AGCGCGAGGAGGTGCGACGGAGCGGCGGAGGGCCCATGTGCGGCTAGACT GCGGCACGAGGGGCGGGGGGGGGGTCCAATCCATCTACGAAGGCGCAGCG GCCTCGTCGGAGGACCAGCGCGAGGAGCGACGCGAGCGGAGGACCAGCGC GAGGAGGTGCGACGGAGCGGCGGAGGGCCCATGTGCGGCTAGACTGCGGC ACGAGCGGCGGAGGGTCCAATCCATCTACGAAGGCGCAACGGCCTCGTCG GAGGACCAGCGCGAGGAGCGACGCGAGCGGAGGACCAGCGCGAGGAGGTG CGACGGAGCGGCGGAGGGCCCATGTGCGGCTAGACTGCGGCACGAGCGGC GGAGGGTCCAATCCATCTACGAAGGCGCAACGGCCTCGTCGGAGGACCAG CGCGAGGAGCGACGCGAGCGGAGGACCAGCGCGAGGAGGTGCGACGGAGC GGCGGAGGGCCCATGTGCGGCTAGACTGCGGCACGAGCGGCGGAGGGTCC AATCCATCTACGAAGGCGCAGCGGCCTCGTCGGAGGACCAGCGCGAGGAG CGACGCGAGTGGAGGACCAGCGCGAGGAGGTGCGACGGAGCGGCGGAGGG CCCATGTGCGGCTAGACTGCGGCACGAGCGGCGGAGGGTCCAATCCATCT ACGAAGGTGCAGCGGCCTCGTCGGAGGACCAACGCGAGGAACGACGCGAG CGGAAGACCAGCGCGAGGAGGTGCGACGCGAGCGGCGGAGTCTTCCGAAG ACGAAGACCATGAAGTTTCCGCGGTAGTTTTTCTTCGCGCGGTCGCGTGG TAATTTGCAGCGTGCGCTAGTCGGCGTCGCAAGTTTGTAGCACAGGATAG CGCAATTTGATGCACGTCTAAAAACTTCTTTGAGCGCGCTAGTATAAAAC GTCTGTTTGAAGCACGATTTAAATAGTCTCGCACGCTAAAATAGTAGCAC AAGCATGTTTTGTTCATTATCATCAGATGATCAGGGTATACTGAGCCTGT GATCCTGGGCTGGATGCTACCTGGGCTAGTGAACTTCTTATTGTCCATCA GGAGTTGATCATCTGCAAGTACAGTTCTCAAAGCTGAAGCACTTCTTGAA CAACCGACTTGGTTTTCTGTTCCAAGTGAGTAACCTGGTGGCTGTCGGAA GCTTAATGAACTGTTGTAATAAGTTCAGTAATCTATGCAAGGAATTCATT CTGAACGAACGGCACCTGACATGCTGCAAGTGGTTCTGTTCTTTCTGGAA TAAGAGCTTTCATGGCCAGAACCAGTACTGTTGATAGGCTCCCCTCGGGA GTTGAGGTGACCAAGCGACATGGGCCGGGGGATGGGTTATGTCCATTATG TGGGGTTCCTGAAACGGGCACCCACATATTGTTCAGCTGTCCCGCGGTCC GGTTTCTGTGAAATTTCATCCGCGAGGCGTTGGGCCCGGATTGGCTGGCC CACGACCTCGGGGAATTCCTAGAAACCCGAGCTAACCAAGCTGGGAGGGA TCGCCGCCTTTTCTGGCTTGTGTTTGCGGCCATGTCATGGTCCCTCTGGA ATATTCGGAATAAGATGGTTATTGAGAAGGTTCTCCCTCGGCGTGCGTCT GACTCTGTTTTCCACTTTCTGGCTTCCCTGCAGCTCTGGTACCCGTTGTG TAGACAGCGGGACAAGGTGAGGTTAGACTCGACTCTGCGCCGGCTCTTGG AGGCGGCTCAGCGGCTCCCCCATAGCTCGACATAGTGTCTTCGGCGTCCA CGATCTCGGCGAATCGTTGGCTCTTGGTTTTTTTCTTTGGACTCTGTCCT AGTTGGGCCGTCTTGTGCTGTGGCCCCAGCATGTGTTGTGTGTGTGGATC TGTACTGTGGTGTTTGGTTGTGGACAGTTGCTTTATTTATAAAGCGGGGC GAAAGCCTATTTCGAGAGAACCAGTACTGTTAGCTCTGCCCGTCAGATTT CCAAAGTGCTCGAATCCTCGGCGTTTGAGCGTTTCAGTAGCACAGTTCTC TGTTGTTTGGACCAAGGGGACTGTTGTAGGTTCACTAAATTATATTTCAA TCATACTACATCAAGGTGATGATCCAAAACACGACATTACAAAGCAACAA AAAATGCCACACTTTCGGCTAATATCCTGGAAACCCAACAACGGTAAAGC GAAAACCTGCTAGCCAAGAGGCTGCTGCCGGCAACCAGGGAAAGAGGACT AGAGAGGAAAGTCCTCCTCAGTCGCCATGGTGGCGATACCTCAGAAGGGA TGTCATATTCTCTCATTTGTGGTAATGTTGTTGTGAGTGGTGTTTTGCTA CTTCCGCAATTTCTTAAAATTTTTCATAATCCGAGAAGTGTGCAATTGTA GTGTCATATTATTGTACTAATTTTATTGTACAATTTATATATGGAATGTT AGTCAGTAGCTAAGAAAATGAACCGAGGTAAATCGTGATCAGCTTAGAAA TGGACAACTCCTGCATTTCAACAGTCGTATGGTACTCTCTCCGTCATGAA ATGACTTGAGTTTTTTTTATTTTCCCTTGTATATAAACGTACTTTAGTAT ATAGTACATGCTAATCTAGACCAACCAAAGTCAGCTTATTTTAGGACGGA GAGAGCTGTTAATTTGCAAGCAGTGTACTAGAGGGACCCAACATAACTCA ATCTTTTAGGAGTATTAAGGAATCCGTTATTACAAGAATTTTGGACATGC AACATACTCCCCCGAACGCAGGAGAGGACATGGAAGAGTGGGACGCAGAA GTGGAAGAGGATCCCAGCGGACCCCGACGAGCAAGGAGCAGATTGTCCTA CTCCAGTCCTTCCAGACCATGCAACAGCCGAATCTGGAGGTCTCCGATGC GCCCATCGAGCGCAGTGTTGTAGAGCTGTCGCGCGTGACAGCCGGGTTGA AAGAGCGCGGCCACCATTTCGCCGTAGACGAGCGGTGAGCCTAGGCAGAT CTGGAGGCGCGTCGTGCGGCAGAAGTGGCGTTCCGCCAGCCGAGTGCCCT CATTGCCGCGTTGGAGGTAGAAGATTCGCACCGCTAGAAGATTGCCCTCG TTGTCGCGTAAATGTCAACCAATTGACTGCGAGTGAACACAGTTGCGATG GCACTTCCTGCTGTGGATGCGGCATTTGCTGAGGAAGCCACTACAAACGC CCAAAGTGGAAGAGACGAGGGGCCAAGAGGCGTCCGACCAAGCTCGCATG AACCTTGACCCGTTAAGTAGGCGCAAACTAGCCATCGAGAGGCACCGCCT AGCCAAAGAGGCCATGACGATGTGACAGGCTAGTGGTAACAATGGCACGA GAGCGGAGGAATAAGAAAGCTACGAGGACGAGGCTGGCGGCGAGGGCCAT ACTAGCTATGTCGATGCTGTCGGCGACGCCCAAGCTAGCTATGCCCATGC TGGTGGCCTAGAGGCAATTTAGTTTAGCAACCTCATGTTTATTTACACAT GTATTTATTTAGTTATAAAACTCTATGCTATGAATGAATGAAAAATTGCT ACCACTATGGGGTTATGAATGAAAATTTTATTTTATTTTTAGAATTTTAT TTTTCTTATAAATAATATTTTTCTGTCAGCGTTAGTATTTAATATCTTGA TGAAAACGTTTCGTGGACCGTGAATATTGTTTTTCATATGAATCTTATTT ATCCATCGTTCTTTTAGAAGTAGAGTGAATTTTTTTTTTTTACATATATG AACATCTTTCGTAGACTTTCAAATAGATATCAAAAAATCATCTTATTTGT AAGCAATATTTTTTAACATGATGGCGTATTTTATTTGACAAACATGAATA TTTTTCATAGACATTTTTTTGAAATAGGGTGGTCTACGTGTGCTTAACGG GACATTCCAGGCCAGTATCCACTGGATGGGTTCAGGACTTCAGGGCCGGA AGGGAACTCTTGCAGCTTGCTTAGGCCTTGGTGGCCCAGCTATCCTCGCT GCTCCATTCCTGAAGGCCGAAGCCCTCGCCTCTCTGCTCCACCCCGAATC CCTTGCATCGCTGCCATGGCCGACGGCGTCGCCCCCTTCTCCAACGCCGG CTACGACGGAGAGGACCGCATTAGCGCCCTCCACGACGACCTCCTCCGTG CCATCATCTCCCGTCTCCCCGTCACGGACGCCGCCCGCACCGCTGTCCTC GCCTCTCGCTGGCGCCACATCTGGCGCTCCACCCCGCTCGTCCTGCGCGA TGCCGACCTCCCCGGCCTCTCGCGCGCCGCCGCCGTTACCAGAATTCTCT CCGACCACCCGGGTCCCTTCCGCACTGTCCTCCTCCGCCACTGCAGGTTC GCCTACCAGGACCCTGAGCTTGGCGAGTGGGCGCGCCTCCTCGCCGCCAA GGGCGCCCAGGAAGTCGCCTTCGTCAACAGGTCCACCCTGCGCAATCCAG TGCGTCTTCCTACCGACATCCTCCGCTGCTCCTCACTTCGGCACCTCTTC CTAGACTTCTGGATGTTCCCTGCCGACCTTTTCCCGGCGCCGACATCATC CTTCCCCACCTCCAGACTCTCAGTATGACAAGGATTCACACGAGCAACCA GGACCTCGAGCGCTTCATCGCTACCTGCCCCGTTCTGGAGACACTTTTGC TATGCGGCAATAAACCCATGGGCGTCTGTGTTCGCAGCCACAGCCTAATA TGCCTGGTCGTTGGGCTGTCCATGGCGGAGGAGTTCGCCGTGGTGGACGC GCCACTCCTGGAGCGCCTCATGTTGTTGCAGCGGCCTGATGCCAGAGATC TTCCTGCAAAGGTCAGGATTGCTTGTGCATCTAACCTGCGGGTGCTCGGT TTCCTGGAGCCAAATTTTCACAAGCTGCAGATCGGTGAAACCGTCATCGA GGTACAACGACATCTCCATCTCTCTCGCAACTTGCAATTATTCCATCCAT CATCTTCTCCTCTGTGGCCATAAAAGCATCTCAGTGCAGTCTCTCAAAAT TATTCCATCCACATCGATCCATACATCATGATTTTTACTATGATCATAGA ACGCTTGATGACTAATTCAATGTATATGTCCTGGTGCACCACTTTACAGT GTAACACAATGGCTGGCCCAAACATTCTGGTTCGAAGCGTCAAAATACTG GGCGTGATGGTGAATTTTGGTGTCTTTTGGGAGATCAAGATGCTGGCCAG CTTCCTCAGATGCTTTCCCAACGTTGACACGCTGCACATTCAGGTAGCTC CCATTTCCTTCAGTCACTCGATCATTTGCCAATGGTATCATCAATTATTA GGAGCATGATCCATATAAGCAACTGAACTGTTCACGTACTGGTACAAATT TGCAGTCTGCCTTGCGTGATCCATCTGTAACTGCCAATGAACCCAGTGGG AAGCATCATGCCGAGTTCTGGCAGGAGGTCTGTCCGGTTGAATGCTTGAG ATCACACGTTAAGAAGATGGTCATCCACGAATTTCAAGGGACTCAAAACG AATTTGAGTTCCTCAAATTCATTGCCATGAATGCCCAGGAACTGCAGTCC CTGCTGGTTGTGTTGCAAGAAGAAAACTTTTCGTCTGACATGGTGAATGA GATAAAAGACAAATTGCAGTGTCTACGGTTTCGAACAGGGATCACTGGAC TACTGCTGGTGTTGCCTAAAGTGGGCATGTTTCCTTGGTTGCAGAAAGCA GCCGATCTTAATATCGAGGACCCTTTTCACTGCTGAATGCATGGTTTTTT GCCATATGTTTACATGATTGTTCCACTTCTTTTGGGGAATTGCTGAGTGT AGATCATGCTGCTTTGTTTGTAGGCATGCCTTCTTTCGAGATATGGCTGG TTTCAACTGCCATGAATAAGAGTTGAAGCTAGCAGAAGTACCCA

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.