Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA038668

[Submit comment/correction]

Sequence	AA038668
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA038668
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	CGCCGGTATCTCGGTATACGTATCTCGCTCTCACGGCTCCTCTCCGCCAC CCGACCCATGACGCCGCCGCTAGCCGCCATTGTGCGGCTCGCCACCGTCT CCCGCGCCTTGATCCTTGCGCTCTCCCTGCTCGCTCGCCTACTCTTCCGC CCCTACGACACCTCGGCCTCCCTCCACCCGCCCTGCCTCTCCTCCCCATC ATTCCCCTCTGCCCCCTCCTCTTATAATTCCACCGCCGCCGCCATCTCGT CCTTGGCCGTATGGGACGGCGTCCACTTCTCCCGCTCGGCCGAGTGCGGC TACGAGTACGAGCAGTCGTTCGCCTTCCTCCCCCTCCTCCCCGCCTCAAT GGCTCTCCTCTCCCGAACCCGTAAGTCACCTCGCATCATCTTCTCTTTTG TCGAGGTGTCTGCTTGATCTGATCTGGTGTTGCGTTTGTCTGACTTGCCT TTCTCCCAAGTGTTCGCGCCCCTGGTGCCGGTGCTGGGGTACAGGGCCGT GCTCGTGATCTCCGGGCATATTTTGAACAATGTGGCGTTCGTTGCCGCCG CGGCCTACTTCTACAGGTGACAGGCCTTCTCCAGCAACGCAAGTTTGGTT TCAATCTCGTTCAGTGTAATCAGGATTTATATATTTAAGTCATGTTAGCC TTTAACTGCTGTCTTAGGTTCTGTGTTTGACAGATAGGAACCCAAGTCAA CTTAAGGGTGTACGAGAGAGCATGCTGTGTCTAATTCATTTTATTGGAGT TGTGCCGGTAGAGAATTTTCAGGCTGTTAGAGCGTATGTGTTGTTTGGTT GATGCATATAATTTTCTACTAATGTTGGTTCATTTGATCATTGAGGTACT TGGTGTTTGCTACTGTCTTGGTATCCATCGGAGTAACAGGATGTCTTGGT ATCCATCGGAGTAACAGGATTGTATTGTTTATAGTGTTAGAGTAGCTGCA GTGAAAAATCTGCCATCAGTTTCAAGTTGTAGTGCACTCATTTCATGTGC AGGATGACAAACTATACTAGTTTATAAATGTTTCCCTTTGCCTAGCATTT TCAATATGGCTAAACTGATTATCTATTCTGATTCTTGCAGATTATCTGTA CTCATCTTGAAGGACTCAGGAGCAGCCTACCGAGCGTCTGTTCTTTTTTG CTTCAATCCTGCTTCCGTGTTCTACTCATCACTGTAGTTATCATTCTCTT TATGCCACAACTAGAAAAACAAAATCACGTATTAACCATGAATTAACATC AACATGTTTCTTTTTTGTTGTTTTGGCAGATATTCAGAAAGTCTTTATGC ACTATTTTCGCTCGGAGGGCTGTTCTACATGCTTTCCGGTGCCAATAACA TTGCAATGATAATGCTCGCTCTCTCTGGCTCCGCTAGGTCAAATGGAGCA CTTAATGCTGGTTATTTCTGTTTTCAGGCTTTGCTACAAGCATATGATGC TGCTATCCAGAAGAAAAGGCCCATAGTAAGTTTTACTTTGGACTTTTATG AACTTTTCTATTGTTCTGCACGGTGCTTATTATAACTAGCTGACATGAAG AGGCTACATGATTGAAGGGGATGTGATGCATCCCCATTCATGGTCATATG CACACTTTCATGGATTTTCACTAGGAAATTTGAAAAGATTCTCAAAAAGT TCAATTGTAGTTGTGAACTTTGTGTACATGCAAACAGTTGTGCAAAAATA TGATTATATGTGCTCTGTGCAGTAGGACGGAAGATGGTGCTCATATTGCA AATGCTAGTGCAATCATTTTCCCTTTGTTTTGTATATGCACATATGATCA AAATTGTCCACGAAATTTGCATGTACAGGTCTTTCACCTGTTTTACCAAT ATGATATTTTTTGACTTTCCTGAAATTCCTGATTCAAAGCGACCAAAATG CATACAAATGTCTGAGCATTAGTCATATATCTTCTACATGGCCTTATATG TTACTTTGTTCTATCTGTGCAAATGTTTTGTCTGGCTACATAAGACGTTG TTAGGGAAACTGTGTGTATCTAACGACATTACATTTTTCCTTTGGCCCTA GTTGGCAGTGCAGGCCCTTATCACTGGATTTTTGCGCTCCACTTTTATAT TTCTACCGTTCTTTGCTTTCCAAGCTTATGGATATTTTAATATATGTCTA CATGGGAACACAGATGAGCTGAGGCCATGGTGCAAAGCAAAATTGCCCCT TCTGTATAGTTTTATCCAGAGCCACTACTGGTAATTATTTCTATCTGAGC TTTACCAGCATTAGCTTCATAATTTATCAAATCTGACCATTGTTGTGCAT AGTATTATTGATTGTAATGTCTTCTTCTGCAGATAGTATTCTATTTTGTG TCGCAACTCATATATAAATGCCATTATATCCTTAAAAAAGAGTTCTGTTC TGTTTTTTTTTGTGGACTTAACAAGTGCTCTTGTGAGTATTAGTCGCCAT TTCTCTTATACAGTACAACCATGAAAATTCCACATTAATCTTTGTGGACT GTGATTTACCTGTTCCTTCATCCTTGTGTTCTATTTCATCAATAGTGTAT GCTACATCCATGCCCACTTCCAAAAGATTATTAAAAAAGGGCCTCTGAGA TCACGGAACTTCAATTGGAATGTCATCCCAACTCCGCAATGTGACCTCTC CAATATCGATGGTCCCTTCACGGAGGAGGAAGTGAAGACCGCGGTGGACA ATACCGCTAGTGACAAGGCACCGGGACCAGATGGTTTCACCGGGGCTTTC TTCAAAGCTTGTTGGAGCACCATAAAAGATGACATATTGGCGGTGGTTAA CCAATTCGCAAGCCTCCAATCAAACAACCTCCATTGGCTCAAGTCCGCAA ATATTGCCCTCATACCCAAAGAAGAGGGGTCCGAAGATGTCATCGACTTT AGGCCAATTAGCCTCATCCATGCTATCTCCAAGCTCATTTCAAAAATGAT AGCCGCGTGTCTCGCCCCACACATGAACAAGCTAGTCTCAAACGCCCAAA GTGCTTTTATCAAGAAAAGAAGTATTCATGACAATTTTTTGTATGTAAGG AACCTTGCTAGGAAGCTCCACAAATCAAGATCTCCAACACTACTCTTCAA GCTCAACATCAAGAAGGCCTTCGATTCGGTCCGATGGGACTACTTAATGG ATATGTTGCGACACTTGGGCTTCCCTAGTAAATTTAGAGATTGGATCTTG GTGCTACTTCGTACTGCTACTTCGAGAGTCCTTCTTAATGGTGTTGCTGG TGACCCTATCAAGCATGGAAGATGATTAAGACAAGGATACCCCTATCTCC ACTTCTTTCGTTTTGGCTATTGACCCGCTTCATCACATCCTTCGTAAAAC CACGGATCAAGGTCACCTCCACAAGCTCCGCGGGCGTGCACCCATGGTGA GGACCTCACTCTATGCCGACGATGCCGCCATCTTCTGAAGCCTCTCAAAA ACGATATTGACTTCCTTGCCGCCACGCTTGACAACTTTGGAGAGGTTATC AGACTTGTGACGAATTGCGCAAAAAGCCAAGTGGCGCCTATTCGATGTGA CAATATCAATCTTGATGACATTCTCCAAGCCTTCCCGGCTACCCGCACTA CCTTCCCAATGAAGTACCTCGGGCTTCCCTTGTCGGTGACTAGACTTAGA AGAATCCATTTCCAACCACTCGAAGATAGGGTGGCGGCTAAACTCTTTCC TTGGATAGGAAAGCACATTACTATGGCGGGAGGACAACACAAGTGAAAGC GGTCCTTACAAGCATTGTCATTTATTTCATCACCGTTCTTGAAGTCCCTA TTGAGGTCCTAACGAAGATCGATAGTTTGAGAAGAGCATACTTATGGGCG GCTAGTGATAAAGTTACCGGTAGGAAGTGCAAAGTCAATTGGGATCTTGT TTGCAAGCCAAAAGAAAAAGGGGGGCTAGGAATTTTGAACCTAAGAAAAT TTGCCAGTGCTCTTAGGCTAAGATGGCTTTGGCAAGAATGGAAAAACGAG GACAAACCGTGGGTGGGGCTTGGTAACCCTTGTAACTCCAAGGACCATAA CCTCTTTGCGGCGGTGACCAAAGTAACCATTGGGAATGTTAAGAAGACAC TTTCTTGGGAGGCAAGTTGGCTAGACGGAGAGAGACCTAAAGATGTGCTG TAACACCCTCAGAATCGGACCTATGCAAGTTTTAGCGAAACCCGCCACAC CCGCATAGAAACGATCCAAAGGTGCCCACCAAGCACTTTCGTGCGGGTGG AAAACGAAGTAATAACATTACACAACAGTCCTCGATGGGACCCACAGAAC AGATATATACAACAGCGACTCAAAGAGTCAAGAATACAGATATAATATAC GAAGATCCAAATCACCTTGAAAATGATAGAGCGTCCGACTACGGACAAGA TGCAAATGGGGCTAAGAGCCCTGAAGAATAACCAATGGCGTCCATAACCC TGCCCAGGCCAAGCCGGAAGGGTAACCCTGCTAACGACGTCGATCTCAAA AACCTGCTCAAAACAAAAGGGGTGCCGACAAAGGGCAAAGGAAAAAAAGA GGAGCGTCAGTACTGAGGCCAGTACACGGCGAGACTAGAATTCGGCGGTC CTCGCCTACATAGGTATGGTGGACTGAAGCGGCAGCGGCAGCATACACTG AATACCCTATAGAGACTCGATACAACTGGCGGCAATCAGAGAGGGGTAAG AAGGACCTACTCGGAACCAAGCTGATACTATCATCAAACAAACCCATCCT GACGTCTCCCCCTCGATACCAAACGAGGAAGTCAACCGAGGAACTCACAC AGTTGGCAGTTTTATTTATTCTGTTATCGTTGCAGTAATTACTAGTCAAG TATAGATGATCATCCTGATAAATTAAGCAGTGGGCACTTTTAATTAACCA TTCCGTTGTAGTTGCGACACTTACTAATCAGATACAAATAGCATGAGATA TCCCAAAAACCCAGCAGTTGTTGGTACTTTTATTCAGCCATTCCGTTGTA GTTGCAATACTTACTAGTCAGGTACAATGGTTGCAAGCGACATCCCAAAC AAACAATTGTTGGCAGTTTTATTTAGCCATTCCGTTGTAGTTGCAATATT TACTAGTCATATCAGATACAAGTCAATTTATAACAGTAAACTTTAGTTAT AGTTGTCTATGATCGAGATACTGCGCTCCAAGTCGTCCATAACCGCGGAC ACGGCTTTCAGAAAGTTTTAACCCGGCCGGGGTGCACAAATAGCAACACA CACACGATCAACCTCGGAAAAACCAAATCAAAACCCAACAAGGTCTTCAC GACAGAGCAATCACAAGATTCAGAAATATTTCAGGGGGCCACCCCATTGA GTAGAACCGCAACGAAGTAAGCAAGCTCCGAGACGGACTCAAGGTTTGGG TAAACGGCTGTGAACGACTGGGAACCCAAAACTGGGCTTGTCGACACCGC GGAATCGTGTCCCGATCCTAAACAGTACAGGTGCTATCTGTCGCACAATT TAATTAAAGCAGTAAAGCATGGCATAAGTACATGATCGTAAATAAAACCT CAAACTAGTTTGTGGCCCCAAGAAATAAGTATGAATCAAGCTCTGGCTAA GGGGGGCCCATACTCCCCGTATGTGGATAGCGCGATAAATCAAGGAACAT GTATCAAGTACTCGGGGTCCTACGGGACACAAGTGGGCGTTCGGAAACCA AAAATTATCTATCACCCACCGATGCCTCTGCTTACTTACTTTAATTTTAG TTGTTAAACAGGAATTAAAGTGAACGATAAATAAAGCCGAGATCATCTCC AACATCAAACCTGTGGCAATACTCCAACAACTGTGGAACTTGACAACACG CAACAGCACTTGAGCAAGCGACTACGACGCGCAAGTCCAACTATCTACCA AACAACAGGTAATAGGATGTGTCCAAGGCAATATATGGCTGCAAGGGAAT ATCACGGGTACGGAACTAGAGCATCGCAACACAGATAGCAATAGATCAAC AGGAGGGAATAAATACTATAAAAGTAAGATAGGTAGAAAGGGGGAGATGC TCGCCTGAAAACATTGTCGAAGGTTCAACCGAAGATCGGGGCGAAGCTCA CATCAACTCAACGGCATTATCCGCGAAGAAGCAAAACTCTAGAATAAACA CCGGATGCACTATTTAATACTACGGCAAAAGATCGGGCATGATGCATGTA TGATGTATGACATGGCAAGGTGAGATGCAATTAGGTCATATTAAGCGGAA CCGGGGTCCCGACAATTAGATATATGGTTCTAGTTGTTTATCCACCCCGC AAATTAAATGTTGTTTTATCATGGCCAAATAAGGTACCGGGTTCGCTACA CAAATTTTAAATGAGGCCAATATGAGACTAGATTTGCCCGCATATGGGCC CCATATTTAATTATGAGGTGAATCGGCGGAAGGCCCCCAAACCACAGACA AGTTTACATGCATGGCAAGTTTATATGCAACAAGTTTATAAGCAACAAGT TGTGTTATATTATAAAATAGGGTTTTCGGGAAGGGGTTCACACATTGAGG GGTCTCGACGATCTTGGGGTTCCGGGGTTCGGGGTTCGGGGTCGGTCTCG GGGTCCAGGGTTCGACGGATACGTTCTCGGACTCCGGGATCGTTCTCGGA TATCGGGGGTAGTTCTTGTCGCGTCCGGGAAGCAGGACTTGGGTCGGTGT CGGGGCGCGTCGGATTCTTCCGGTCGACGCCGTGGTCTTCGGGTCCGTGT AGGCGGTCATGGCGTCCAAGGTGGCGAACTTGGCGTTCCGTTTAACGACC TTGGCGTCCTTGCCGGAGTTCTCGGTGGCGATGTCGGTCTTGGGTTCGGC ACCGGCGGATCCGGGCGATCTTCAGGCTCGGGTCCTGGCGTGGCCTTGGG TCACCGGGATCGTTCTCCGGGCTTCGGATCCATGAGGTAGAGCCTGGAGT TCCGAGATGGAGTTCTTGTCGAAAGGTGTAGGCCGAAGATCTTGGCGGTG GTCGTGGTTGCTTGTCAACGAGGAGGCATTGTCGCACCAAACTTGCACCG GTTAATCTTTCGAAGATCATGGCGTCTCCCGAAACAGGACTCGTTTTGGA CTTTGACCGCGATATCTTCAGAGTACCAACACACATTACACCGACTCATC ATGGTGCCCGACTGGTCACTGAAGAACTTGACGTTCGGGTACTGAGCTGC AGGGAGCGGGCCTTGGCGAAAACACTCGACGCCTGAGGACGCGCTGGGTG GACAGAGGGGCGCAAGCGGCGACACGCGATGCAGAGACAGGCCATGGCGG TGGGGTCGAGCACCGGCGGCGGCAAGGCGCTGGCCTGCGGGGGCAACAGC AGGCGGCTCGGAGGAGAAGCGGCCGACGGCGCGGGACGAGGGCGGCTCCG GCGGAACGACGGACGGAGCGGCGCCGGAGAGAGGGCCCGGGGCGATGGCG TCGAGCGGCGGCCGGCCTGGTTGCAGACGTCGGAGCACGCGGCGCGAGGT GGCCGCGGACGGGCGAGGCCGGCGACCTGTCCGAGGAGGCGGCGGCGGGG AAACGCAGAGGAGGCGCGGGGACGGGGCGGAGCTCGGCCGGACGCCGGAG GCGGAGGAGGCGGCGCAGACGGGTGGCCGGCGAGGCGAGCAGGGCCTGGT CCGGCCGGAGCGGAGGCGAGCGGGAGGAGGAGCGCCGCGGCGAGGAAACG CAGAGGACGCGGGCGGCGCGCGCTGAGGCGGCCCGGCGGCGGCGAGGCGC TCGCGAGGCGGAAGGGCGGCGGTGGCAGAGGTGCGGCTCGAGGGGAAAGA GGGCGCGGGAGACGGCGAGGGGAGAGGCGGGTCCGGTGGAAGGCGGAGGC GCGCAGAGCGAGCTCGAGGGAGAGGGGGATGGCGTCGCCGGCGGCGAGCA GAGGAGGGGGCGCGGGGCTAGCAGAGAGGCGGCGGAGGTCGACGGGGAGG TGAGCGGTCGCAGCGGCGAGCGCAGCGGGGAGGAGGGGTCGCCGGCGGCA AGGGGAGCCCGCCGGAGGGGAGGAGGGTGGAAGGCGGTGCAGAGGGAGCG GCTGTGAGGCAGAGAGGGCGAGCGGGAGGGAGGAAGAGGAGAGAGGAGGG AAGGGGCCGAGCGGGTGGGGTCGGGCAGGTGGGCCCGCGGGATGGGGCCC GGGTGTCAGGGAGTGGGTGCGTGCGGCGTGTGAGTGCGTGCTGAGTGTGG GCCTGGGAGAGAGAGCGGCTGTGGGGAGAGAGAGGGGGTTGTGTGGCTGG GCCAGGTGGCAGCGTCTGGATGGTGGGGAGTTTGGGGAGGGTGAGGTGGC ATCTGGTGATTGGCCAGGGTGATGTGGAGGCAAGGGGGGGTAGATTAGGT TGGGTGAACTTAGGATTTAGAGGGGCTGGTTGGTTGGACCGATTATATTT CTGGGGTGGTCGTTCGGGTCATTCGGCCCGTTCGACTGCCCCACTAAAAA TAATGCAATATTTTATTTATTTAGACGGACCGTTTGCAAAACATATTTAG TCAAAACAAAATATTCCGGCGACCCGGGTTTGCGTTTGAATAAAGACGGG GCGTTTAGAAAACAAGAACCGGTTTTTCCGAAAATAATTTTATACAAGCA CATGCAAGATGATGACGATGCCCAAATGCAATGTGGCATGATGACATGAG CATGCGGTCATGATGATGCAATGCACAAAAACAACGCGATTTTCTAGTAG TGGTTTTGCGGGATGCCACATGTGCCCCCCCCCCCCCCCCTTATTTTTGA CATCTCAAAGAAGAAGCGATGCTCGGTGCAACAAGCTCTTCTAAATGACT TTTGGGTCTCACAAACCAACACGCAAGATGGCCTCACCATGCAACATATT GAACAATTCTACAAGCTTTGGGAGAGGCTAGCCAACATCAATTTAGACCA ACACACCCCGGATGATATCACTTGGAAACTAACAAGAGATGGGTGTTACT CGGCTAAATCGGCATACAACATGCAATACTTGGGACAAGTCAACTCCTTG ATGCTGAACATGGTTTGGAAACCTTGGGCGACTCCCAAGTGCAAAACCTT CGCTTGGTTGGTTCTACAAAACCGGGTTTGGACGGTGGATAGACTCACTC GAAGAGGTTGGCCCAATTGTGACCGTTGCAAACTTTGTAGCCAAACACAA GAATCGGCCTCACACCTACTTTTCAAATGTCGTTACTCAATGAGAGTTTG GAACAAGCTGAAAGATTGGCTCGGCCTACAAGACATTAACATCGCAAATT GGCACCATTATAGATCCGTGAAAGAATGGTGGAAAGAGGTGATCCACAAA AGGGGAGCACAAAGGAAGGCTATGTCCTCAATGGCAATGTTGGTCTCTTG GGAAATTTGGAAGGAGAGAAACGCTAGGGTCTCCCGAAACCACTCCATAA CCGTGGAAATGTTAGTCAACAAAATTAAGGAGGAGGTTTCTATGTGATGC CTTGCCGGCGCCAAGGCCATTAGTAGTATAATGCTGCGTGAGTAGTTGGT TTTTGTGTCGTTTTTGTGGCTGCCTTGGTGTCGTTGCCAAGGCTTGGTTC TGTAACACTCTAAAAACTTCTTGTTTAATGAAAATGGCAATTCTTTTGCC ACGTTTCAAAAAAAAAACTGTATGCTATTAGGTTTTCAGGATGCCATGCT TGCTATTGTGGGACCCTTGTTTGTGCTCTGTGCCCCCGTATAGGAAATGG GAAAATCCATAGGCACGCCAGGATTTGAAATATTTGTGCTGCTCTGAACC GTTGGTTAAGAATGTCCATGTCCTATACAATTGTACACAGCCTATACTAC TAAGCTTGCTCTTTGACTAATGGCTACTATCTCTTGACCACTTATGAGTC TCATGTTTGCAGTCAAGCTTTACGTTGTTTTCTATCTTTCTTTACAGGGG AGTTGGTTTCTTGAGATACTTTCAAGTGAAGCAGCTGCCCAACTTTCTGT TAGCTTCACCAGTGCTATCTCTTGCAGTTTATTCTATAGCTCATTACACA AAAATTCTTCACCAACTCTTCCAGTCAAATAACATACACGAGCAAATTAT TGACACTGTTGAGGGGAGGTCAGTTGAAACTTGTGAAAGCACAGATGTAG CCACAGTGCTAAAGAGTGCATTTTCTACTGGACTAAGTAACAAAAAACAA GGTAATATTACATTCTCAGCTGTCAACATATTTTCTCTATCCTGAAAGAT TATTGGACACATCATCAAATTTATATTATTCAACTTTCTTAAAGATGCTG TTTTTTCTGACTTGCTAATATGTAAATTCTATAAAATTAAGTCCAGTGCT TTGAAGTTGGCATAGGAATTCAGAAAGTTTGAAGTGGCCTGTGAAAATGA GAACTGGCATCAACCGAATGGATTTGAATAAAACCGAGTACTTTGAAGCT GGCCTAGAAATTCAGAAAGTTTGAAGTGACCTGTAAAAATGAGAACCGGC ATCAACCGAATGGATTTGAATAAAACCTTTTATATGTACCTAACTCTTCA CTGTTTGAACAGAACGCACTAATGTTAAGAAGAGAAAATCTGCTGCAGCC AGCGCTGCTTCGGCATCTTTGGATGGCAATAGGTTGACCAGTCAAATTAT CAAAGTTGATAAGGATGAGTGCTCCATACTAGTTCTTCCTTTCATTTTAC ATCTGACATTCATGACATTTACTGCCTTCTTCGTGATGCATGTCCAGGTC AGTATAATGCCTGCGCCGTAGAACAGAATGTATTTTTAAGTGCTGCAGAG TCGATTACTCAAGTTTTGTCTGTTCTTTCCTTGGTCTAGGTGTCAACGAG ATTCCTGTCTGCTAGTCCTCCGATCTACTGGACTGCTTCGTGCATTTTGG CTTCTTCAAAGGGCTCTAACAAGAGACGGGGATACTTCATCATTGTTTAC TTCATTGCTTACATTCTACTAGGCAGTTTGCTCTTCCCCAACTTCTACCC GTTCACATGA

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.