Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA000345

[Submit comment/correction]

Sequence	AA000345
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA000345
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	CTGTGCGTGGCGTGTGGCGTGCATCACGCTTTCCCAATTCAGGCCGCACC GAGAGCTCAACCAAACCCACCACCGGCGCCGCCGCGACGCCATCCGCAGA TCCGATCCCATCTCAAACCCCAGATTGGGAGATTCCACCCGCGCCACGCG CTGCCGGCCGCCCGTCCCGCCTGCCCTTGCCGGCTGGGCAAGCAAGCAAA ACCGATTCTCCCCACCCCGCCCGCGATTCCCGCAACCCTAGAACACCCCG GCCGCCGCGCCGCCCAGATACCCCGACTCCCCCCGCAGAGGAACCTCGAT TCCCCAGCAGCCTCCTATCCTCCCCCGGAGAAGCCCCGAATTCGCAGCCA AGCCCTTCTTCTGCCGGCACTTCGTCGAGCCGTCGCCATGGATCCGCCCC CGCCCTACGACCACCGCCGCGGCGGCGGCGGCCACTACCCCGACCACAGC CACCACCGCGGCCACTACCCCGACCACCAGCAGCATCACCACCACTTCGC GCCGGGAGGAGGCGGCGGCGGCGGCGGTGGCATCGCCCCTGTACGCTCCA GGCACGAGCAGTACGACCCGTACGAGCCCATCCCGCCGCCGTACGGCAAC AACCACCTCCACCACCACCACAACCACCACCATCAGCCCCCGCCACGGGT CCACCACCAGCACCAGCAGCTGCCCCCGCCTCCTCCCCTGCCGCCGCCGC AGCAGCACCGCCCCAGCTATGCACCCCCTCCCCTGCCTCCTCCTCCTGAG GTGTACTCCACCCCACCGCCGCCTCCGCCGCCATACACCCACCCCCACTA CCCCAACCACCAGCGCCACGCTGACGAGGAGATCCGGCGCGCCGCCGGGC ACCACCACCACAACAATCAGCCACCGCACCACTACCAGCATCAGCAGCCA CAGCACCAACACCAACACCAACACCAGCAGCCGCAGCACAATCACCACCA GCAGCCGCATCAGCCGCAGCACAATCACCACCAGCAGCCGCATCAGCCGC AGCACAATCACCACCAGCAGCAGCAGCCTACGTGGAAGGAGGCTGTGGAT GACAGGCGCAGATATGCCCCTGCCCACCAGGAGGCCGAGGATGACAGGCG CAGATATGCCCCTGCCCACCAGGAGGTCGAGGCTGACAGGCGCAGATACA CCCCTGCCCACCAGGAGGCCGAGGCCGACAGGCGCAGATACGCCCCTGCC CACCAGGAGGCCGAGGCTGACAGGCGCAGATACTCCTCCGCCCACCAGGA GGCCGAGGACAGCAGGCGCAGATACTCCTCCGCCCACCAGGAGGCTGAGG ACGACAGGCGCAGATATGCCCCAGCCCACGAGCTCCATCTCTCACCATCC GTACCGCGCAAGAGGCAGCGGTGCGCCTTACATGACGGTGGCGACCTGGA GAGCACCTCCAGTTCCGGCCAGCTGAGGCAGCAGCCCCATCCCAACTATG CTCCAGTTGACAGTTATGTAGATAGGACCTCTGCCCATCCTGGCTACAGC CACGAGAGCCTCTCTACGCACAGCGACAGCAAGGGCAGCAGGAAGGTAGA TATGCCTTTGCGGACGACGCTGTCTGGCTCGCCACGTGCCACGGTTACTG CGCAGCCGAGGCACACCCCGCAGAAGCCCACTGCCCCTAGGAGGCTCTCT GTGTGGCAGCGGATAGAGGAGAGCCCTGCTTCCGCGGGGCAGCTGCCAAA GGCTGTGCACATTTCCCCGTCCAAGTCGAACAATGGTGGGTCTGCTTCGA AGGAATTGTCCAGCGTGATCTCCGCGGACTGCAAGGCGAAGAGTGCTGGT AGTAATGATGGTGACAGCACTAAAGTAATAAAGAGGGTGTTGTCCTCAGT TCTTGTGAAGCCTTCGCCGGAGTCCAAGGAAAAAGAAAGGGATGTTGAGA AGCTTCCCACGGAGCATGATAATACTCCGAAGAATGTGTCAGGTTCCCCT AGTAAAAGTTTGGGCTTAACTGGTCGTCCTGTGGCTGGTGTGAAGAAAGT GAAGAAGATAGTTATCAAGAAAATAGTTAGGAAGATTGGTGGCAAGGATA CACAAATTAGTAGCACGATTGTCTCTGAGAAGAGGGATACTGTTGATGCC AATGCAAATGCTTCTGAGAGAGAAGAGGGTGAGATCATAACGTCATCGTT GGAAAAGGATATTGTATCTGAACATAATTTGGTTAGCACTAGTGATACAG CTGGAGCCGGTAATGTCCAGAAGGGCGAAAATAATAACTCGATAAATTCA CGCAAAAGGAAAGCTACTTCAGCCATCGAGTCCAAGAAAATTCTTGATCC AGCAAGTCTTAATGGGAGTAAGCATCCTGGAAAAGGAAACAATAGAAGTT CCAGGGATCCAGGTGACACTAATGCTGCTTCAGCCATTAAATCTAGGGAA GCGCTTGCTACAAGGCGCAGTGAGCATTCTGGGAAAAAGGATAGGAACTC CATGGATTCAGGTGTTACGAATGATAATCATCAGAAGGATAATCATCAGA AGGAAGAGGGTGAAATCCTGTCTCTTTCAGGTGAAATGAATGCCACAGTT GCAAGTGATCCTGTGAAAAATTCTGGTAGGTCTGAAGATTCCAGCATGGA AGAGAGCAAGTTTCCTAAGGATACAAGTGAAAACAATACTGTTTCTATCA ATGGAGCTACTGTAAATCATGATGCGACAGAAATTTGTGGAAGTAGGGGT GCTAGGAGGGAAGACAATGACATCTTTATTGACGCAAATGAAGAGGATGT TCGCCCTGTAAGCAATTTCATTGTAGCTCCTAGTACCACAGAATTTATTA TGTGCGAGAGGAAGGGTGCTCAGAAAAATGAGGGTATGATTCTGACTGGT TTGGGTGGAAAGAGTATCTCTTCCTTCGGTGAGACTACAGGAACTCCTAG AACAACAGAAGTTAGCCTGAGACAGGATCCATGGGAGGAAGAAGGTAACA TGCTGACCCATCCAAGTGAAAAGGATTCTGTGTCTATTAGTTGTCAGGGA ACTCTTAACACTATGGAATTTAGCGGCAATGGGAATGTCCAGAATAAGGA AGGTAAAACGCCTATGGAATCAAGCAAAGGTAGTGTGACACACCACGTAA AGGCTTCTAATACAAGGGAACTCGATTTGAATGAGGATACCAGGAACAAA GAGAGCCAAATCCCCATAGAATTTTGTCAAACTAACACTTTCAAAATAAC ACACCACCTGGAAGCTCCTAATAGATCAGAAGCTATTATGAGTATTTTTG TTGGAAGGGAAGTGGGTAAGAGCCTCATGGGGTCAACTGAAAGACATGCC GGGACTACTGGTAATTTTGAGAGCACTCCAGAATTTAGTTTAATTGGTGG TACTGATGATAGCCACATGGAAGATGCTCCTGTGGGAATTGAGGGCAGAG ACTTCTTTAATCTGCCATCTTCCAGAAATGTTGAAAGCAGGAATGTGGCA CCATTAGGTAATGATCGTATAGAGGATTCAGCAGTTGATATTATTTCGAA TAATAGTGAAGCAAGGGGTGCTACAGCTCAGGTAGCAGAACTGATAAATC TTCATAGGGGCCATCTGTCTACTGAGATTGATTTTCCCTTGGTACATACC CTCAAATCTTCATCTGTATCTGGTAACAGCGAGCAGTCTGTTCCTACAGC TTTGACACTTGGTAGTAATTTCTATTTTAGTAACACAGAAAGCGAGAGAC AGCATGAGGAAAAGCATGAGCGGCTGGAAGGACAGAAAGGATTAGATGTT GCCACACCGGCAGAATTTGATAGTCTTGTAAAACAAAGAGGTGTGGCTGA TAATGATTTAATCGGTATAGGTGCTCAAAATTGGCTGACCTTACCGCCGA CAGTCAACGACATTGCTATGTCTCGGCAGTTTCTGACTAACAATGTTACT GTTAGGGAGGATAGGATAGGTTCGGATCAGAGCATGGGTAATGACACTTC TGTTAGTCAGGATCATGATGTTGCACACCATATGGACCAGTGTGGAAGTG TGGATCCTTTCTCTAGTCAGGTTAACAGCATTAATCTATCTGGTGACAAT GTGCCCCGATCAGAGCCACCATCACCCAAAGAGATCAGTGGCAAGGTTGA GAATCATGGTGGGCTAGTTTTCTCAGGTTTGCAATCTGTTAATTCAATAA ATGTTCTAGATCAATATGATCCTCAGATGGTAGATATTCCTGTTGGTAAC CCAAATGAGCCTGCTATTCAAGCTATAGAATCTACTGATGTGATGGATAC AGAGCTAGTTTCTCCTCAGGCATCTGCTGAGCCAGATGCAGGGCTAGTTT CTCCTCAGGTATCTGTTGAGCCTGATGCAGAGCTAGTATCTCCTCAGGTA TCTGCTGAGCCAGATCATACATATGACAGTAATGCTGAAGGTCCCGTGGA TGACTCAAGCACAAAGCAGGCTTTGCTGTCCTCTTGGATTGAATCCATTG TGTCAGAAGCTAAAAAGGAGCATCAACCATGCAAATCTACTCTACCTTCT ATCGTTTTGCCAGACAAGTTATTAGCACCAAAGGAGGATAGCAGGAGAGC AGTATCAGACTTGGATGGAAACCCTGTGGTAAGACCTCCCCTGATGAATC GTACAAGCTCTATGCCTCCCATGGTAGCTCCTAAACAGGTCAATTTGCCC AGTTCATCCCGAGAGCCCCCTCGCTTAAGTTCAAATCCAAGGCACAAGAC ATGGCATCGTGGTGACATGGCACCTTCTACATCTTTTCATGGTTCACAGC CTTCAGGATTACCCCCTAAACAACCACCGAGGAGGAATGACAAAACTTCG AACTCTTATATACGCAAGGGTAACGCTCTTATTAGAAATCCAGCAACAGG AAATCCTCCTCGTTCTTCTTCTAGTCTGGATACTCAGAAGCCTGTGACGC GGAGAAGCATGAACTTTGTCAGGAAAGTTGATTCAAATGGTTCTATAGCA CGTACTAACTTTACAGTTGAAAGACCAAAGACTCCTCCTTTACCACTTCA TGCGAAATCCATCAATTCAACTACAAACCTTTCGGAGCAGTTATCTAAAA CTTTGCCCAAGCAGCATGTTCCTGAAACTGAAAAGCAAGATCCCATTGGG CAATTAAACTCAGGTGTTGAAATCCCACACATTCAAAGTGCACAAATATC TGAACCCTCAGATGCTAGTAAAGTGGTTTATGTTAGACCAAAATCAAATC AACTGGTTGCTGCACAGAGGCAGCACCCCGATGACCCAATTAACAGTTCC ATGGATAAGGTTCTAGCACTGCAGCCACCCACATCCTCTGATTTATATTT CAAGAAAAGGAAAAATCAGATTGTCTTGAGTTCCTCTTCCTCTGATGGTC CGATTACAAAAGAAGCTGCTCCTGCTGAGAGCTTAAATTCAGGTGAGAAT AAAGGTGTACAGGTTGCATCCTCGAACAATAGTATCAATGGATTAAAGGG CAGACCACATAAAGGTACTCTATTTTATGACTATATTGTTCCTTGTGGCT TTTCTCTAGACATGTTCTTTAATTTATCAGCACAACATGTCCTAGTACAC AGGAATTATATCAGAACTCTAGACAGTAATGGGAATCTATGTGTCCTTGT CTTATTTTTCGTAAGTACTAATGAACTTTGTCAGCTTATAAGGAACTTTG ACTATCAAAAGATTTAGACATGAGCACTATTTTCCTTAATCTCGTTGAAT GATGACACATTTTGCTCATGGTTTTCATTGTTATTGTTGTTTATTTTTGT TAGCTAGCTTTTTACTCAACGACTTCTTGCATTCTTTCATTTTTATTTTC GCCTTTTGAGGCAGTACAATAACTGTAACTTCATGCTTTAATAAGAAAGC AATGGTAATTCATTAAACCATCATTTGCTCAAACTTTTCTCAATGCAGCT TTCCAGAGAACAAATAATATGGGAACTTTCTCTCACGTGTGGACACTCAG TGGGCAACAACCACAGAGGAAAGGGCATGTGGGTGCTAGTTATGTGAAGG CCTTCCCACGTATACTTCCATGGAAAAGAAAAGTATATTACAAGAATTTT GGAAGCAGTCACACTCAGAATGTGAGCTCCTTACGAATAGTCAGGTAATT AGCGTACTGGCCTGGACTTGTTCCCTTCTTTATTGAGCCATTTCATTTGA TTTGTTTATAGTAAATCTTTCTTTTTTGTCATGTAACAGAAAATTACTGC AAACTAAGAAGAGAGATACGACTTATACTGTCTCAACTAATGGATTCTCT CTACGGAAATCTGCCGTTTCAAGTGTTGGTGGATCAAGTTTGAAATGGTC ACGATCCCTTGAGAAGCGTTCTCAAAAGGTTAACGAGGTAGTTTCATTGA TATTTTTTATACCTAATTTTTCATATTCAGTAACCCATAAGGGTCAGTTG GAGTTACTTTCACCAGATCATTGGTTTTTATGGAAAGTCCAGAATGAGTA TTTTTTGATGATCTGTTTTGTGTTACTGGTCGAAATTTTGTTGTCTCTAC CTCCAATCCAAATTACTCGTCACAGGTTCGTTGAATCTAGACATATGTTA GGCAATATTATGTCTAAAACTGCGACATTTAATTTGGATTGGATGGTGTA ACCAGTTTGTTAGCTCATGCCTAATGATAATGCTGGTTCTTGCCTATATT GTTCTCACTATACATGACTGGGCTGCCAGGACAGTCATGAGAGTAGCCAT GCAACCAAATTTGGAAAATGTGATTTCACTATCCAAATATTAAGACCACA TTGTTGTGTGTACTGGGTACATGGTACATTGACCAAACAAAATAAAGTTA CAACCTGGATTGCAGGAAGCTTCACTGGCCGTTGCTGACGCTGAAAGGAA GAGAGGAGAAAAACGGAAGCGGCAATCTCTCCGTTATACACGAAGAAATG GTATGCGTTAACCTGTTGCCAGTACCGAAGATAGGCATAAGTGCTAAAAT AATATATGTGTGAGATACATAAGTTTAGATGGAAGTTAAGTAATTCTAAC ATGCTCCACCATATTGCAAGACTGCTTCTCAATTGCATTTTTATCACACC ATATTACAAGTCTAAATCTGAGCTACTTACTGGGTGGACATCTGCTGCTG GTCTTAGTTTGTTGAAGCATCACTTGTAGTGATTCTATTTCAAAGTGTAG CGCATGGGCATGCTCTCTTTATTTCATAATTTAAGAACCTTGGCTCATTT GTTAGTAATTACATAGAGCAGTGATTCTAATGTGTAACCTTCATTTTGAA CGTATTACCTTGAATCGCCTTTGTAAGAAAATACTGATCATTTTTATGTC ATGTTGGTCGAAAATTGCAGATCAATACTCTCTACCAGCTGCTGGCAATC AATTGAGAAACAACAATCAAGCATCTTCAGATTTGATGAAGTCATTGAGT GGCAATGAGTATGTTTTAACCATGCTATTGCTTGCATGATGCCATCTAAT AATAGAAGTTATTTGCATGTTAGATCTTTGAACTTTTATTTGTTCTCTGA TTGTCTTATGTTGAAACAGATATGTGCGTGTTAGCAAAGGTAACCAACTG GTCAGAAACCCCAAAAAAGTAATCCGTATGCTAGCAAATGAGAAAGTTCG ATGGAGTTTGCACACTGTTAGATCACGCCTGGCAAAGAAACAACAATACT GTCAATTCTTCACTCGGTTTGGCGAGTGCAAGAAGCCTGGGGGCAAGTGT CTTTATATTCATGACCGTGCCAAAGTGACTATTTGCACTAAATTTCTTAA AGGCCTGTGTTCTGATACTAGCTGTAAACTCACTCACAAGGTAAGCCATT TCCTCTTGATTCTACTGCTTATCTTGTATTTGACATTTGTTTCATTGTAA GAGTCTGTTCTGCAGGTCCTTCCGGAAAGAATGCAAGATTGCTCTTATTT TCTTAAAGGTAATTCATTTCATTCACAGTGCCTCATTTTTACATTTTTTC TCCTGAAAGCTTCTTGATCATTTTATTTGTTACTCCGGCAGGCCTCTGTA CCAACACAGCTTGTCCTTATAGGCATGTGAAAGTGAACTCTAATGCTCCT GTCTGTGAAGACTTCCTGAAGGGATACTGTGCAGACGGTGATGAGGTACT TAATGATATTACCGGAGATTTATCAATCTTATTCAAGTATTATTATAGCT AAAGTGGAATTCAGCATTGTCCTAGACAGCTGGTAATAAACTTGTCAAAG AAAAAAAGAATCAGAAGTGAACTATTATGAAAAATGGCCCTCCTTTAAGA ATCATGAAAACTACAATAAGTCCAGTAGGATGGTCTCATGTTCTTCCTCC TGTCAATCAATTACTCCCTCCGTCACATCTATTTTGAGTACTATTATTTA TTTGAAGCTTTAGGTATAATTTAGCACCCAATACTTGTAGTGGCTTTACA ATTAGCTCATCTTCAAAATGGTAAGACACGCATGCTCTTAGTCGTGTAAA CGTGAACTATCTGGTGTGATTTAGTGATGAACTGTTGATAGGTAACCGAA ATGAAGGTTTCATTAGTAGGGTGTCTTCTTTTTTGTTAGAACTTATTTGT GCCGGATAAGCTTGCAGTGCACTTGGTTAGTAAGCATGTTTTGATTGCAA CGGCCTTCAGCTTTTGGACTTTGGGGCTTCCACAGTCTTTTTTATGTTCT GAACCAAGCTCGCTAATCTTTTCATGGTCTTGAATTAATCTCTGTTACAA GCAGTGTCGTAAAAAGCACAGCTATGTATGCCCAGTCTTTGAGGCAACAG GGGAGTGCCCTCAAGAATCTAGGTGCAAACTTCATCACCCCAAGAAGACG ATCAAATCTAAAAGAAGCAGACCAGATACCCCCCAAAACAGCAGTTGGGG ACGGTATTTTGACACCAGCATTGGACATGACAGCGGGACGAGCAAAGTTT CTTCAGATCAAGACGACAGACAGAAACAGCCGCGTGTTTTCTCTGGTGGG GACTTTGTCGACTTCATCACGCTTGACACTGACGGCGATGAAATTGATGC ATTGGACAGCTTACAACTGATGGAATTGGGCTCAGGGGATCTCAGTGCAG AGGCACAGGCTGATAATCTTGATGCACTGATCAAGCCTATTCGGATCATG AGAACAGCGAGAGTG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.