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GrainGenes Sequence Report: AA039843

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Sequence
AA039843
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA039843
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
CTTGACGCTGATCACCAACATCCAGTGTGCAAGCTTTTCTATCAAACATG
ACATATAAGTTAACTTGATCAAGACTCATACTGGACTATCATCAAAAAAT
GCTACATTATGTTTTGGTTGCATCAGGATAGTATTACCTGAATCTAGGCA
CTAATGTCCATAGGTGGGAAAGACTGGTAGAAAAGTCTGTACGAACCACT
GAAAAAATGGGTGGGGAAAACTATTTTAGTCAGGTTGGTTGGGATAAAGC
TTGCAAAAATAACCTGTCTTTTTGCCTATGCTTATTCATTGTTGGGGGTC
AGGTTTTGTTGGTCAGGCACTGAAAAGCCTTAATAGGTCCTACCTATGCT
GCAGTAAATTTCCAAGTTCTCTTAGTGCTTACTGTCTTTCAAAACCACAT
ACATCTTTCTTTAGCTTATGGGTTTATAGAAATGCTTCGTATCTATAGTT
TGAAATATTCCTGCCCATGGTTTTCTTTTAATTATGAAGCAGATATACTT
TTTTAAAATACTAGCAAATACATTATTCATCTATTTTTTCCATGCATGGC
AATGTGATGAAGTTAGAATTTTTTCATGTATTTCATCCAGATTCCAGTGG
AGTAGCAGAGATATTATTGTCCAGAGGGGCCAATGTTGACCCTATGTGCG
AACTGGGAACCCCGCTACATTTAGCTGCTGAATGTGGAAACGTGCAAATG
CTGGACATGCTGTTGCGGTATCAGGCAAATGTAATAATTTCCTTCTTTCC
ATATTTGGTATGCCCTTTCCGGTCAATATTGTTGTGTGCAGTATCTTATC
CATGATAGCTGAGAAGTCCTGGCCAGGAGGAGCTCGGTTAGGCCCTTAAT
GTCCTTATCTTCATTTTCCCTCAAGGGACCTTCCCATTACCGCTTACTTG
GTGAATCAATGCTATTTTTACCTCATTGACTGACTGAGCCAGACACTGCT
CTGTTTTTTCTGCCCGCTCTAGTCTTGTGTCTATTTACGTTCTGTTCTTC
TTTCACCATGCATTATACTTTTGTTCATGGGCCATTGGATCTTCCCTTCC
TTAAAGTGTATAACATTCTCTATGACTGCCTGATAGCAGTCAGATCAAGT
TCCACTTTAATCTACTGTACCTATGTTAGCCTACAGAACTGCTTAGCTGC
TAGTCATTCTGAGTGCTGGACTGTTGGTGCTGGGTAGTTTGCGCACAGAT
TTACTCGCACATTAATGAGCATGAAGTATAGATGACAATGAGTAACATCC
ATATAACCTTAAATTACCTTGTTTCCGTTCACATGCTGTTTGAGTGTTCA
TCTGAACCATGTAGTGGAAAGTGGAAACAGTTGCAGAATGGCCAGTATTT
TTTTTGGAAAAACATAATTGATAAAGCATTATGGTTAACTTTTGTAAGGA
AATTTGACTAAAATACACCAAATGCTGTTTTTTGGTAATGCTTTTATTTG
TTCTGTTAAATAGTTGCATAAAGAGCTGATAGTTTACTGTTCGACATTAG
CTATTGTGTTATTGTTTCTGTACAAGTGATGTGTTGTTTGCCTTTTCTCC
AGCCTAACAGGGTTGTACGTTTATTCTATGCACCACTGACATTGGCTATC
TTTGCTCCTTCGTTGAAGTGTATGGAACTACTTATTAAGGTGCAGTCACA
TTCCCTTCACAGCATCTACTTACCTTAGTTTTTTCCAAAGGGAGGTCAAC
AAATTTTGTTATGTCATTCCTATAACGAGCACAAATTGCAGCCTATTCTA
GAAACACTATCTTCAACATTATGTGGTATTCAATGTTTCAGGCTGGTGCT
GATGTCAATGCTGGTAGGCCTGTAACTCCATTAATACTAGCTGCAATGGA
TGGCTTAGCTGACTGCATCAAGTGTTTGTTGGAAGCTGGTGCTGATGCCA
ATATTCCCGATGAAGTGAGTTTCTGCACTGCTACTTAGGTTGCTGTCAGT
TTGTCTCTCTAACGGAGCTGCTGAGCTGTCTTATTGTTATACTTCTGAAT
CAACTCTCCTGGAGTGTTAGAAATGAATGGCTGATTATAAATCACACGAT
CTCTGGATTTTATTTTATACATATATGTAATAACATGACTAAATTTAGTC
CATTTGGTAAACATCCGTAAATAATGCCGCATGTTATTTGGTGTTTGTTA
GGTTTGAAAAATTATTGTTTGTTACTAACCTGTTTTATGTGATCCTCTCG
TTTATCTGATTTTTTTTACCTGTGTTACATTAATCCCACTTCTGACGAAA
AAAAGAGAAGAGACTGTTTCTTCAAATGAGAAATTTATTAGCCTGTTAGG
GACCAATACTTACTTTTTAATGCAGTAGAAAAGGTGTGATGTACTGAATA
TTGTGGCATTATGCATATGCTAGAAGATGGATCGTTGCTCTTATCCTGTT
CCTTATTTCAACAGTATGGTGAAATGTTCCTTTTTCGAAATTTTGTATGG
TGAAATGTTTTACTCGCAGACTAAAGTATTGTGAAACATTGCTGTAATAA
GAGCAGTTTAGGGTAAAATGTGCCACACTGAATTCATATGCCTGGTTCAA
TTCAAATAATGATTTATCTAGGTAATACTGAACTTCACATCATCTGTGCT
TTCCACAGAAAAGGAAAGAGCAGAGGAACTAAACATTCATGGACCTGTTT
ATTTTATACACGTATTCTATTATACGTTAATACTTATACTGTACAATCGT
CTATAATTCCTCATATTTGGATCTTACAGCAATATGCTTGAATGTAATAC
CTTTGCCACATTCTTTATCTGTCAAACTGATCCTTGAAATGTTTGTTAAC
AGATTGGTAGAACACCATTGGAAATAGCTGCAATCCAAGGATGGAAGGAT
TGCGTTGAGATCCTTTTTCCTTTCACAACCCGTGTAACCAGATTTGCAGA
CTGGAGCATTGATGGAATAATGCAACATGTGAAATTTGGGAGTTCAGGAG
TATGAATAAAACATCTCCTTTTGTACTTAGTACTCCAGTTGGATTGATGC
CTATGGGTTACACAGATCACTAAAAATGAAATAACTCTCTCTTAAAGATT
TTTCACTGCAATGCACTCTATACAATATTTGACTTCTATTTCCATTTGAT
TTAGGATTATAAAATATGCAAGGAATCTGCTGTAAAAGTCGAAGGGGATG
CTGCATTTCAGGGAAAGGATTATCCTAATGCATCGGCTCTGTACACCAAG
GTAAATTCTGTCGTCCTAATGCATCTACTGCCCAGTGGCTGCATACTAGT
ACATCCTGAGGGCTTGAATAGATACTTGGTTACCTTATCGTATACTCCGT
CCGTGCAAAAATGCAAGGCGTGTAAGATTAGTCAAAAGTCAAATTGTACT
AACTTTGACCATATATTTAGGAAAAAATATGTACATCTACAATATTGAAT
GGACACATTGAGAAAACATACTTTATGGTGAATCTGTTGATATTGATTCA
GTATTGTTGATGTTCATGTTTTTGTGTATAAACTTGATCAAACTTAGAAG
CCGTTGACTTTTGACTAATCTTAGACGCCTTTTACATTTTGGGATTGAGG
GAGTATTGAAGTTCTCAAGGAAGAAAATAATGATATTTCAAGACACATGC
TGAGATCTGTGTGCTCTACTTCTGAACAAGCTTTTATTTACCACCTTTTA
GGTCCAATTTTCTTCCTGAACTATCTGTACATCTGCAGTGCTGATTCTTG
TGAATTGTTTCTCAATTCTTTAATTTAATATTTAATTAATTTTTTAAGAC
AAGGTGTTTTAGTAGCGTCTTTTACAGCTATCTTTGATATTTTGGTGGGA
TATCATTGACCGCTGCAGGCAATGGAGTCTGATCCTAATGATTCAACCTT
GTATGCAAAGAGGAGCCTCTGCTGGCTGCATATGGGTGAGAAAGACAAAG
CTTTGAATGATGCTAATACCTACAAAGGTATGGATCTGGATTTATCAAGT
TCCTGCCATGAGCAAGCAGCAGCTCTCATACTGACACAGGTACAGTTTTG
GCAAGTTGCAATGACATCGCGTTTTCCATAATCTGCTGTATTCCCTTTAG
CCCTGGCCATGCATTGATTTCTGTGTGTTTAGGAGTATGGCCTTGCATGC
AAAGCTCTCGTTTCTGGCTTGAAATTGAATTTTGGACGAGGTCCGAGTGG
TGAAGTATCTAGGTAATCTCTGCTCTTGTCCTGGTAATGTTTGATAGGAT
AGCTCGAGGTTGTTACTTTATATGTTGTAATCAAATATCGTAAGATCAGT
TAGATACCAGAACATTCTTGCTTTGTTTTACTGTGACATCCACAAATAGT
ATCACTTGTACGCGGCGCCACCATCTGTTCATTGTAGTTTCTCCCATGCT
CATTGATGATGTTGTAACGCAGGGGGGACATGTTGACATCCATCTTCATT
TTTTTTATTACTCCCCCCGTTTCTTATTACTCTGCACGCTTAGGCTCGGT
TAAGGTCAAACTTCGTTATGTTTGACCAATTATATACTCCCTCCGATCCA
AATTAATGGTCTCAACTTTGTCTAGACATGCATGCATCTAGTCTAAATAC
TTAACTTGATTCATACAACTCTAGACAAAGTTGAGTCTTTTAATATGGAC
CGGAGGGAGTAGAAAAATATACGAATTTTTTAATGCAAAATCTATACTAC
TACTAGAAACATAATGAATTATAATTCCATATTATATCAGTTTGATATTT
TATCACATATACTTGGCCAAACGTCTCGTGAAGCTTAACTTTGACCAAGC
CTAACGAGTGCGGAGTAATATGAAAGAGGGAGTGTTAGTTTGCCAAAACA
GATTATATTAGTGAACAGAGGGAGTATCTGTTTTGGTTTTCGGATCACAT
GTCACATAGAATTAGATTGTGCTCTGATTAGTCGTCTGTGTTAGGAATAG
ACAAGTTATATTCCTCTGAGGGCCAAAGGCCACAATATATAGTACATGTA
CAGGGCAAATATGCAGGCAGCCCCCTAACATACGGGGGAAATACAATAAA
TATATACATACATCTAACACCCCCCTCAAACTCATGGTGGATCCACAACA
CTGAGTTTGGAGAGTAAGAAATCATGCTGTGCTCTGGTCTGTGCCTTCGT
GAAGAAATCCGCCAACTGTAAATCTGAAGGCATATACTGAAGCGCAACAA
CCTGAGCCTGCACCTGAGCACGTGTATAGAAAGCATCAACACCAATATGC
TTGGTAAGCTCATGCTTGACCGGATCACGTGCAACACTAATAGCACCTGT
ACTGTCAGACAAAACCAGACTGGGTGTGGTAATAGAGACCCCAAAATCCG
CAAGTAACCACCGTAACCAGGTCACCTCAGCAGTCAACAAGGCCATCGCA
CGCAACTCAGCCTCAACACTCGAACGGGAAACCGCTGTCTGTTTCTTTGT
CTTCCAAGCAATGAGCGAACCACCAAGAAACACACAGTAAGCAGAAAGTG
AACGGCGATCCGAAGGATCACTCGCCCACGTAGCGTCCGAATAGCACTGG
AGCTGGAGGGAGCTGGAACGAGGAAAGAAAAGGCGACGAGTGATCGTACC
ACGAAGATAACGAAGAACACGGAGAAGATGGCTATAGTGAACAGTGGTAG
GAGCAGAAACAAACTGACTCAGAATATGAACAGGATAAGAGATGTCAGGA
CGAGTGACAGCAAGATAAACAAGGCTCCCAACAAGATGACGATAACGCGT
CGGATCAGGAAGAGGATCACCATCAGTGGGTTGAAGCTTAACATTAAGCT
CCATAGGGGTCTCAACAGTGCGCTCATCCCCAAGAGCAGCACGAGCAAGA
AGATCCTGAATATACTTTTCCTGGGAGATGTAAAAGCCATCAGAAGTGGA
GGAAACCTCAATCCCAAGAAAGTATCGAAGAGGACCAAGATCAGTCATAA
GAAACTGATCACGAAGACGAGCCTTAACAAAGGCGATATACTCAGAATCA
TCACCAGTAATGATCATATCACCAACATAAAGAAGAAGAAGAGTGCGTCC
ACGAGGAGAAGTGTGAACAAACAACGCTGGATCATGAGCACTAGGGGAGA
AACCAGCAGCAGTCACTACAGAAGCAAAACGCTCAAACCAGGCACGAGGG
GCCTGTTTAAGACCATAAAGAGAACGTCGAAGACGACAAACCATCCCCTC
GGGAACGGAATACCCAGGAGGAGGCTGTATATAAACCTCCTCACGCAACT
CACCATTGAGAAAGGCGTTCTGAACATCAAGCTGGGACACAGACCAGTGA
CGAACAGAAGCAACAGCAAGAAGAGTACGCACAGTGGTCATATGAGCCAC
AGGAGCAAAGGTCTCATCATAGTCACGACCATGCTCCTGCTGAAAACCAC
GAGCCACAAGACGCGCTTTATAGCGCTCAAGAGATCCATCAGAGCGGGTC
TTAATCTTATAGACCCACTTACACGTGATAGGACGAACACCAGGAGGAGG
AGAAACAAGATCCCAGGTGCCAGTGCGCTCAAGCGCGGCAAGCTCCTCAG
CCATGGCCAGCTGCCATTCAGGATGATGCTCAGCGTCCCGATAAGAAGTT
GGCTCGGAGGCAACAGAAAGACCATACTGACTGGGAGAGTAACGGTTGGG
GGCACGACGCTGACGAACAGGACGAGTAGAGGGAAGATCATCAGAGGAAG
ACGATGCAGAAGACGACAATGAAGAGGAGGGAATAGAAGAGAAAGACTCC
GGAGAACGAGGAGAACTAGGAGAACTAGACGGAGAAGAAGAGGACGGTGT
CGAAGAAGAGACATCAGGGGGAGGAGATGCGGAAGAAGTCACAATAGGGG
TAGAAGGAGGTGTGTCAGGAAAGAGAAGAAAAGAGATGTCTTCCACCGGG
TAAGTACCAGCGGTGGGACGAGGATAGAAAGGACGCGTCTCATCAAAAGT
AACATCACGAGAGATACGCATCCGACGACCAACAGGGTCCCAACAGCGAT
AGCCCTTATGCTCATCACTGTATCCGAGGAAAACACACTCAACAGACTGA
GCGGTCAGTTTGGTGCGTTCGCGAGGAGCAAGTAAAACATAGCAAACACA
ACCAAACAAACGAAGCATGGAGTAATCTGGAGACTGTCCAGAGAGGCGCT
CAAGAGGGATACCACCCTGCAAGGCAGCAGAAGGCTGAATATTGATGAGG
TAAGCCGACGTAGCGACAGCTTCAGCCCAGAAGTGCGGCGGGAGAGAAGA
AGCAATCATCATAGCGCGAGTGGTCTCAAGAAGATGGCGATGCTTACGCT
CAGCAACGCCATTCTGGGCATGTGCGCCAGGACAAGAGAACCGAGCAAGA
GTGCCCTGCTCAGCAAGAACACCTCGCAACATCTGGGAGATATACTCACC
AGCAGAATCAGCACGAAACACACGAATGGGGGTAGAATATTGAGTACGAA
CCATAGCCGCAAAACGCTGATATAAGGAGAGCACCTCACTACGAGAGCGC
ATAAAATACAACCAAGTGTACCGAGAAAAATCATCGATAAATAAAATATA
GTAGCGATGGCCCCCTTTCGAAGCGAAAGGAGCCGGACCCCAAACATCGG
AATGAACTAAATCAAAAGGTCGCTGAGATACAGACGCGCTAGTAGGATAG
GGAAGCTGAATCTGTTTACCCAACCTACAGCCCTGACAATGCAAAGACCC
ATCTCCTGAGACAGACCCCAGAAGACCACGATGAACTAATGACGAGAGGC
GAGAGTCACAGAGGTGACCAAGACGATGATGCCACTGCTGAAAAGAGCTG
GTAGTAGAGGCGACAACCGGAGAAGAACTGGTGGATGAAGTGGCAGCGGA
AGGAACACGAAGCCAGTCTAACTCCCAAAGTCCTGAAGAATCACGGCTGC
GAGGGCCAGCTCCAACCAGGGCCTGGGTGCGACGGTCCTGAACAACACAA
GAATCAGCATCAAGAATGACGCGACAACCAGAGTCAGTAAGCTGGCTAGC
AGAGAACAGATTCATTTTAAGAAGAGGGACATGAGAGATATCAGGAACAA
AAAAAGAAGAAGTAGAAAGGGTGCCCCGACTAGAAACAGGGAGAGAGGTA
CCATCAGCCGTAAAAACACGGACAGGAGAAGGGAGAGAACGAAGAGCGGA
CAAAGAAGAAGACTCAAATGTCATATGAAAAGAAGCTCCAGAATCCAGAT
ACCACGGGGACGTACCTGACTGTGTAGAAGGTGGTGGTCGCACAGTGCCT
GAAGAGTCAGTCACAGAACCAGCAGTGCCCGTCGAAGAAGATCCTGTAGC
AGCAAGCAGACCGCGAAGACTCCTGATAATGTCCTGATCAGAGAGGGCCA
CTGCCGAAGACCCGGAAGGAGCCGACTGTCCACGAGCCTGGTGCTGCTGA
CGTAAACTGGGGTCCCGTGTATAACAGGTGGCCCAAGTGTGACCATCCCT
GTTGCAGTAAGAGCAGTGACGAAGAGAACCACGGCGACCCTGACCACGAG
CCGGCTGGTGCTGACTCGGACCCTGAGGCTGCTGGTGCTGAAACTGACCC
TGACCCTGACCGGGAGGAGTGGGTAGGATCGGCGGCGGCGGTACAGGAGA
CCGTGGCTGAGGCGAGAGAGCAGACGGCAAAGGAGCACCACGAGTAGCAA
GCGCAGATGGAACCGCAAGAAGACCAGCACCACGAAGACGGGTCTCCTCA
GCCCGAAGCTCAGACAACACCTCAGAGAGCGGAACACGACCACGAGCATT
CAGCTGAGCACGCCGGGGCTCAAACTCCTGGCGAAGCCGAGACAGAAACT
CATAGATGCGGTGAAACTCCAAGTCCGAGCGCACAATCTGGCAGCACGAG
CATGTGCCACAAACAGCAGTGCGGAGAGAATCAAGCTGACGCCAGATAGC
AGCACTCTGAGTATAAAACTCATCAATAGTGGAATCCCCCTGCTGAAGGG
CATGCTCCTGACGAACCACAGACAAGTAAAGAGCATCCCCAGACGGCTGA
TAGCGCTGACGAAGATGGGCCTACTGAGCAGCAACAGTAGGGAGACTCAT
GAACTCAGCAGCATACTGGGGCAGAACACTGGAGGTGAGAACAGCAGCAG
CACGAGCATCCTCATCGACCCACTGAGTGTAGGCAGTCAGAGCGTGGCGA
TAGGACTCGAGATCAGCAGAATATTGCTTGAACTTCAGGTCATAGGCAGC
AACAGCAATATCATCAGCACTCTGAGCAGCATCCTTGGCCTCCTGAGAAG
CATCAGCAGCAAGCACAATCGGTGTCGGAGGCAGAGGTGCCACAGGAGCA
GGGGGGCACGACGGACACGAGACCTCGCCGGAGAGCACACCCCAAAGACG
GAGACCGCGCATGTGAACGCGCATAAAGGCAGCAAAATCAGGGTAATTTG
CGCCATCAAATACCACCGGGTAGCGAGGAATCGCAACATAACTCGATGAA
GAAGACATTTTTTTTTTTAGATCAGATCTAGATCCAGGCGAATTGGACAA
GAATCAGTCGGCGGCAGCCGGCGCGCCAGGCAGGTGGAGGCCCGCGCGCG
TGGCGTCAGGTGGCAGGCGTCAGCAGGGAGCGCGTCAGGTGATGAGTACT
GCGGGCGACGGGGCGTTTGGCAGCCGCGCGCGTGGGAGCAAGGGACCTGC
GCGTGCCTGCGCGTGGGAGCAGCCAACCGCCAGGGAGCAAGGGCTGCACG
TGGAAGCAAGGGCTGCACGTGGAAGCAAGGGCTGCTTCTGATACCAAGCA
CGCCAACCGCCAGGGACCAGCCGTGAACCAGGGGAGCACAGCACGTGGGC
CGGGGACCAGCCGCCAGGAGCGCGTCAGGGAAGTACCGCGCGTGGGGAGC
GCCGGGAGCGCCAGGGAGAACCGCGCCTGCGCGTGGAGGACGGCTAAAAT
AAGCAGAAGATCCGATCCGAGAACGAGGCGAACAACGGCCGAATGCGGCG
GCGGAGAACCGGGGCGGACGACGGCGACGCAACGAGAGGAGAGAACCCTA
AGGCTCTGATACCATGTTAGGAATAGACAAGTTATATTCCTCTGAGGGCC
AAAGGCCACAATATATAGTACATGTACAGGGCAAATATGCAGGCAGCCCC
CTAACATACGGAGGAAATACAATAAATATATACATACATCTAACAGTCTG
TTTATTTACGTTTTCTGCTGAAATTTTCATGAATGACCGTTGATTTAATT
GTATGCCACTATAAAACTTTGGATTAAAACTTGCAGGGAGAAGAATGCGT
GAAGAAAGGTTAGCTGTTACTACCCGGGCATGTCAAACGTCCACTGAAGT
TGTGAGGATTGCGATTTTGTTCGATCCTGCATGTTGACAGTAGTGTGTCT
ATATTTTATGATTAGAGACATAGCATGTAGGCTACTCCTCTGTCTAGAAA
TAGTTAACTTGGATTTGTCTAGATTTGTTGTATCGATCGGGGATGGACCG
CTAGCCATTATATTGTGTGTTAGTAGGAAACAAGAGATATAACGCCTACA
TGTAGGTACTCTCTCCGATCCATAATAAGTGTCACTCATCAAATACTCCT
TCGACCCATATTAGTTGACTTAACTTTGTCTAGATACGAATGCATCTAGA
CAAGATACTTGACTAGATACATATGAATCTCTATCTCTACTATATAATTT
TGCTTAAGGTGGTT

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.