Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA006159

[Submit comment/correction]

Sequence	AA006159
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA006159
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	AGAGAAAGTAGCAGTACTACTCCTCATCCCGCTAGTGCTATCTGAGTAGG GAGGGAGAAGGAGCAGGAGAAGAGAGGGAGAGAGAGAGAGGGGCTAGGTC TGGGGAAAGGGCAAGCTAGCGAAGAAGGAAGGAAGGAAGGCAGGAAGGAT GGGCCGTGGTAAGGTGGAGCTGAAGCGGATCGACAACAAGATCAGCCGCC AGGTGACCTTCGCCAAGCGCCGGAACGGGCTGCTGAAGAAGGCGTACGAG CTGTCGGTGCTCTGCGACGCCGAGGTCGCGCTCATCATCTTCTCCACCCG CGGCCGCCTCTTCGAGTTCTCCACCTCATCATGGTATATACCCACGCCGG CCCCCTTTACATACACACATACGTCTAACGGTCCCGTCAATCGATCTCCA CAGAGCTTGTCTTTGTTTTGCCCTAGAAATCAGTCAAGTTCCGTTAGCTG AAAGTTTCTCTGGGTAGTACTGATTTATATACGCCGAAGCCTTTTCTTCT TTGGGGGAATTTTGGTCTTGCAATTGCATGCTTCTGTAGGCTAGCTACTG TCTAGATGTTAGCTCCTCTTCCCCTTTTTTTGCTGTTTTGGGGAAAGATT TGTTGGATCTTTCCATCATCCATCACCCAGGGTGTTTTGCCTCTGCCTTT CCTCTTTTGGTGTTTATCTGTAGGCTACACCGGACTGCCATTTATTTCTT CTCTCCGTGTTGCTCACTGCACGTGTGGATAGATCAGAGAATATAAACCC TGCTAATTAACTCCCAAGCAACCAAGTCAGGATATTTTTGATGATGAGCT ACGACTCTCTTCAGATCTGCACAAATTACCAGTCAAACACCACCAAAGGA AAAAAGATCTGCACAAATACAAGCTATTGAGTACTACTTTTTTCTCTTCT GGGAGGGAAGCAAGCAAGCAATTTAATCGGGAGTAGTATCTTTTTACTTC AACAAAAACTTAATTATTTTTCTTTTAAGCAACCTCATAGCAAGCACTAT GAGGTTTCCATCACATATACTTGCTGTTCCACTGGGGAGTTGTTGCCTGG GGAGATCTGTCCGCCTCTCCAAGTTTCTGTACGTTTCAGTAGATTCTACT GTTCCATTGGGAGCTAGCCATCCCCCCTCCTTCAGATCCCAATTCTACTG TTCCATTGAGCGAGCCCCTCTCTCTCCTCTCCCCACTCCCTATCTTTCTC TCTCTCTCTCTCTCTCTACGTCTTGTCAGCGAGCGCCGTACGTGCACGCG GCCACGGCAGAGGGTAGCCAGCTCGTGCTAGGAGGGGAAAGTAATTGAGA AAATGATATGTATCGATGCGCTCGCTCAGTGCTCAGTGGTTATCCCATGT TGTTCTTCGCATGTGAATCCATAGACGTTTGACAGACGGGTCAAGTACGC GCACGGCCACGGCAGAGGGTAGTGTACTAGCATAGCATCGATTCCTCCAG CAGCAGGAAGGCAAGCGTGAAATGCTTATGGGAACTTCGAAAATACTACA ACGGTCCTGGGTTGGGTACAATATGATTCTAACTTGAACAGTGGAATCGA AAGAAAAAACACTAAACGAAGTTTAAAAAAGTGAAATAAAGTTTTTCATG TAGAGAAAACGCATCTATGTATGTGCATGCCAATTTTCTTACTGAGTACT GAAAATCAAATGTATATATATAGCTTACTCAAAAATGATTAAGTTCCAAA TAAACAGTAAGAAAGAAAGCTCAAGATTCAGACTTATTATGTAACTTAGG GGCAGGGTATGTATAATCGGCTTCAGAAGAACCTAAGCTAGGTTCTGAAA ATTCACGTTTAATTGGTGATACTACTGCTATGTGCAGTACTCCAGATAGT ACCGTAGCAATGTTCTCCAGGGAGTAGGGCTTTAGTGCTTTGCTAGAGCA TGCGTCATCATGTCATAATCGTATGCAAGAAAACGGACATGGAGTCAGTC AGAGAATGGGTATTGGACACACACCGGCTGGAGAAGAAGATGCCCCGCCC CGCCCCCCTAAAAGATGCCATGCGTGTAAATGCAAGATGCCATACTAGTA CAATACAATCTGAAACACTACCGTTACAAAGTTTTCTGTTGTGAAAATGG TTCCACAGTCTTTCTGAGTACTCTCTCCGGTGCTTATAAGCATGACGTTT TAGGCATAGTTTTGTTTCAAATTTTAAATCTTTTACCACCGCCAGCATCA TCCTTAGAAATATTTTGATTGGCTGCACAGTTCATATATACGTGTGTGCT TAGTTGTTTCTTAATATTTTGATAATATGCCACTCACCGGTACAGTTTTG TCGTTTAATAAAAACTTTGACCGTCAATTTTGTCAACAAAATACTCCCTC TGTCTCGAATTAGATGAAAGGGATTTTTAATGTATAGATACATGCGAATT TAGACAAATCTCTCACATTTAATTTGAGACAAGGGAGTATGAGATATATG TCGTAAAACTTATACTGTTGGATTCATATTAAAAAGAAGTATACAATGGT ATAATTTTGGGGCATATGTCTCAGATTTTGTTGGCAAAATCGATGGTCAT ACTTATTCTGAAACTACTTGTGTGCCTATTAAAGTGAACCGGAAAGAGTA ATGTTATTAAGTTTTATAATTATATAACACTACTAATTAATGATGATAGT GTATGAGCGAGTAATTAACAATATGAAAACGTGTATATGTGTGTGGTCTG CAGTAGTGTGGCACCGAATAAGAAACGTCTAATATATATGGTGAACACTA TATATTTTTAGAAGGAAGGCTCGGAGTGGGCTCGGTTTTGAATTAGCGAA GCCATAATTGACTAGGAGTTACAACTAGCACACACACACACACAAAACAA TTGAAGACCACAAATGGTACGAGACACAAACAAAACTAATAAACGAAGCA CTACACGAAAGGAGATTGCTTGATTCAGATGAACGAGCCATTGTCTTTTG TTGCATGGAAGCAACGTCGAAGTTATCTTCACCAACAAACCTCCACCGCA CCAACACCGCCGCCCATGGGGGCATACAACCTTGCATGCCCCGAGAATCC AAACGAGGGGGATTCAAATGACACCTCCAAGAAGGAACACATGGCCTATG AGCATCATCATAGCTGGTAGAGTCCAAGGACCTACAAAGATTTTGCCAAT TCCCATCCTCCAACCATAGAACTATACCTAGCCACTAGCCAAACAACCCA TGTCAACCAAAAAAAGTCACAGTTGTCTCCCAAGGCTTGACATCACCTAG AAAGCCCCCTAGGCTGCGGGACGAACCTCAGAACTAGAAGAAACTCGGTG TCTAAGCAACCATACTTATATTGTAGAGGACCATGACGATGGAGAGGTCA CTAGGATCTAAGAGACATTGCAGGGATAGCACACCTACACGAGAACCACG AGAGGGCAAGTTGAGGCGTAGGGGTGGAGTCCCGCAAAGAAGGTAGGAGG GCTTCAAGGCAATACCTTTAGGAAGGGAAAAGACACTCACATGTGTCGTT GTCACCGCCAATGGCCACAACCACACAAGCTTTTCTAGCCCTGACAAACC CGAACATCAGACACCACCATGATGACGTAGAGAAGACGAAGCTCTGGCAA TAGCTGCATAGCTACCACCCCGAGAATTACAGTTCTCTAGCCCCCGCTAA AACAGTACACATCAAAATAGAGTGCATCCTCCATATTTGACCACAAGGGG CCCTCCTGGTGCTGCCCAACCTAGATTGAAAAGTTGCACCAACAACATCG TATCTTGATGTAACCGCAACCTTTGGCATGAATGCAAAACCAAGGGCCGA TGACTGAAGGAAGGCGCAACAAGCCCACGCACAACCTTCCACGGCTCGGC CCGCCTGCCAAATCTGACAGGGTTCTAGGAGAGCACCCATAGGGAAAGGG CTGCTCGAGGTGTGGTTGCGGACGGACGGGTAGGAGGAGATGGAATGCAG CCATACTAGATCTGGCACACAAATCTAGCCGGGGATGGACCCGGGATACC CTTCAGTCGACCATCGAGCTTCCACACCATTTGGGCTCCATGTTGTGATT AAGATGTAGACCGCCGGCTGCCAAGGACCCTTGAGGCACCCGGCGGCCAT CAAACCAGAGCCCACGATAATGGAATGAACTACGAGAATCCCTCCCCCAC ATCCTGGCCACCGTCAGCCCCAATAGGCTTCGCCCGGCAACGACCTCTAG TGGCGGAGGGGAGGATGGAGGTGGAGAGGAGATACATCGGCTGCTAGGGT TACGCCCCCTCCCCTCGAGTCGCCTTGGCGAGATAGACGAGGGGGTCAAG CTCATAACCCGTCTATGGATTATTCTTTCAGTATGTGAGCGATGTTCGCA TATGCACCGAACACTGCATTTGAGGTGGCATTAATCCAATTACTCCATGA TTTGCAGATTGATGTGCCATAGTTGTAAGCCACTGTTTTTGTTCGTGTTT TTGTAATTCTACAAAACTTTATGTTTTCTCTTTCTGTATGGTTTATGCGG TTGTGTGCATCCTATTTATGCAGAGGCCGGGTATAAACTTTACTCAAAGT AATAAAAGCGCACATTTCTAAAAAAAATAAACCAATTACTCAATCCATTT TCAGAAATAGACGATTGCCTAGAAAGCTTATGTGCAGTCAAATTTATCTA ACTTTGAATAGATGCGGTGATAGTTAAATTTTTTTTTTCATTCTTTGTTT AAAAACTATGGGGTCTAATAGACCCGGGATCCAAACCACCTTACCTCATG TAGTAAATCAATCCACGGGTATGCTATTGGTCTCATTACTTTGGTATAGA AGACCTCTGCCGAAAAAATCCTTTGGATTGAAAATCTACAAAATTTGTAC GGGAGAAAACCATGAATTAAACTGCACGAGGCTTAGGCTACATATTTTCT TGGTAAAATTCATGTACGTAATCAATTTTTTTGTGTTGTATCAACAGCAT GTATAAGACACTTGAGCGGTACCGCAGCTGCAACTACAACTCCCAAGCAA CTGCAACTCCGGAGACTGAACTGGTAACATCTTATCAACACTAATATTTC ATACACATTTCATGCATGTGTAAGCCGTATGTTTTTTTAAACAAATTAAA GAACTTATTGTTGCTGGAAATATGTATATGGGGGGATGATCCAATGCATT TTATGAATTGTGAGGGCTTGGTTATACTTTCATTTTATGGTCAGATCGAT GTTTTCAATCTGGTGAATTAAGAAGTACTCCATTCTTAATTTAATACCAA GGATCATGGTGAATCAAGTATAAAGAGAAAAACATATGAAGAGAAAAACA TATTTCTATCAAATTGATCGATCTGTGGATATGTCTCCTGGCAAGTGATA ATACCCTTATAAACACTGACATATATACGCTCGGTGTATAATATAGCTCT ACCCTATAGTCACGATTTGCATTGATTAATCAGTAGACTGTTCATATTCT CTTATTCAAACTAGAGCAACTACCAAGAATATTTAAAGCTGAAGACAAGA GTTGAGTTCCTACAGACAACTCAGAGGTATGTAGTCTCTAGCAAACTAAA AAATGTTGGGGGTAAACTATACCATTAATTAATTACCAAGAGTGTCTAAA TTGGTCGCTACAGGAATCTTCTTGGTGAGGACTTGGGCCCCCTTAGCATG AAGGACCTTGAGCAACTTGAGAACCAAATCGAGATATCTCTCAAAAATAT CAGGTCGACAAAGGTAAGACGTGACCAAGTTTATTAAGCATATTTTCATG TATAAACTGTGATTATGTCCTTCACAATTTGAAAGGTTTCGAATACAGAT ACATGCAGCATATATAAAAAATATAAATGTATAAAGTTGTAATATTTAAC ATACAAAATATGATCCTGAAATCCTTATTGTCTATTTCTGTCTACATATG TACAGAGCCAACAGTCACTTGATCAGCTCTTTGAGCTCAAGCGTAAGGTA ACAACTGCATCATTGTTAATGTGCCTTCCTTTGGTATTTACATCTTTCAA CAACTACGACACCAGAATGACTAACCAAAAATATGTGCAGGAACAACAAC TGCAAGATGTTAACAAAGACTTAAGAAGGAAGGTAATACAGTATTATGTG CCATTCATACACATAATCGTTTAGCTAATCCTCATTTGGGCATATTCAGG AGTTCCATACACAATATATGGAAGCTTCAAAAGATGAAAAAATATCTAGG GAAAGTTAGCACTAGCTGGTATATTTCATTCGGGTATTTCGTTTCCAATT ATCTAGTTTTTTTTTTGACAAATTTGAAACATCGGACAACTGAAATTATG TTATGAGTAATAAAAAATTTCCTAGAGACAACACACAATTAGTATAATGG CTTTTGCTTTCAACAGTAGTTTGGATCCATGTATATGCTTGCTAATGGTA ATGCACTCATTAATGCTGAACCACGACAAGTCCCATAGCAGAATAGTTAA AAGAAGGAATATATTTGTTCTGAAAATATGGTTTTTGGAAACTGTATGAA TGGTTGGGGGCGCTATATACTCAAAGAAAGCGTGAGCTCTATATGCATGT TCTCAACTTTTATATCTTTGCTGTACCAGATACAAGAAACTAGTGCAGAA AATGTGCTGCATATGTCGTGCCAGGATGTTGGACCTAGTGGGTCTAGTGG ACATGCTAATCAAGCTAACCAGCAGGAACCTTTTCACTCTGCAGTTTGTG ACCCGACTCTGCATATAGGGTAATTCTTTTTTTCTCTTGAAATATTAATA TACAAGTAGGATATAGTGGCACATAGTAAAGTTTAATGTGAATCAATATT TCTTGTCTAAGCCTTATTTAGCCCAAAGTTTAGAAAAATATGAAATGCAT ATAAAAAATATTTTTGAACAGAATACAGTATATATGAACTGGATGGCCAA CGTGCGAACGCGTAAATTAATTGAATTTTATCTTTGTATTATCAGCGAAC GTTGAAGACTGCCACCCACATACTAGAACGTAGCTTGTACATAAATTAAT TGATTGAAAGAAACCATATCCTTTTAAAATTGTTTGGCTATTAAACTTTT GTGTAATTAGCTATTACAATATCGTGCAGGTATACTCAATCGTACCTGGA TCAGCTGAACAATAAATGAGTGAATGGTTTGGCTGTCGCCTTAGCAGGGA TATCTAGCTTACATTAGCCTATTGTGTACTAATCAAGAGGTCTGTTGTAT GCTATTTTGAATTGAAGAGAAGAACTATCTAAGTGCCGGATGTTAAATGA ACACAGTTTCTCATTTTGAATTATGTATCTACTGAACAGTGCAC

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.