Query (optional)   in Class  

GrainGenes Sequence Report: AA004376

[Submit comment/correction]

Sequence
AA004376
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA004376
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
CGCGCTCTTTCCTCCGTAAGCGAGGTGGTACTAATACAATCAAGCCAGCG
CGGGGGAGCAACAAACCGACTCGATGAATTAGAAGCAATTGGGCTGCCCT
CCAGCTATACTAGTTGGGCCGTCCATTCCCCCAACCCACGAAAACTCGAC
AGCCCAGCAGCCAGGTGAACCTGGAGTCTCCTCCTCTGCGCTGCTGCGCT
TCTTCTTCTTCCTCCGCTTCCCGCAACCCGCTGCCATCTGCGCCCGTGGG
AGAGAGCGGCTACCTGCGGGATGAAGACGAGGTCGCAGGCGAGCCCGAAG
CCCCTCAATACCGTCAGGCTGCCCCCCGTGGCGAGCCCCAGGACGAAGCC
TAGGCCGGAGACGCGGAAGAAGGGGACCCTCGACGACCTCCGCCGCCCCA
AGAAGCCCCCCACCGCCTTCTTCTATTTCATGTATGTATGCACTCGCGTC
TTTCTCCGCCTCGAAATCTCAAACTGAGATTGCAACTGAATCTCATATCT
ACTAACTGGCGACTGCTCAATCAATTGGGGATGCGGTATCAGGGGTTTTC
GGCTGGGCTGCTGGCTCGCTCTATCGCACTAGTTAGGCTAGTTTCCTTGT
GGTTCGAGGGAGGCCTGTTGAGAATTTTATCTCAGTGGTGCATTTGTTTG
TTCCCCAGCTGGTGGCTGGACTCACTGTTGTCGCTCGTGTAGCCATGTTT
TTTTTTGTTTTCACAAAGTAGTTTTGCAGTCATGTTTGAACCTACGTTTT
TGTAAATTGCATCTGTTTGTGTCTGTATTCGTGATGGTAGGAGCTTACTT
GAATGTATCCAGTGAAAGTGATGCCAAAATTTCCTGAACCCTGGTCAGAA
CGGCACCACTCCTTTTCTCATAGGCCAGAGGCAGTTTATTTTGTGATCCC
ATCTTGGAAGTTGAGAACTTGGAGCCTGAAGCCATCGGATTCTGATATGT
CATTAACAAAGTGTTCCAACTCTGCAATGTGCAAAAGGCACTACCTTTAT
TTCTCATTTGATTGGCATATATCTGACATGGCAATGTTATCAGCTTATCG
TACTCAGTTCACAGTAGCACTGGAAATGGTTGATCGCTGATGCATACAAA
AAATTTATGCTCTGTTGACTTATTCTAATATTGATGGTTCAAAAATATTT
TAAGCACTGAATAACTGCTCCTCACGGAAAAAGATAAAGAATAACTGCAA
TAGGATATTGTAGCTGGACTATCTAATTTTTTTCTGCTTCATCCAATTGT
CATTGTTGAACATATTGATTGCTTGTCCTTTGGATTTTTCACATTGTCTT
AGGCGTAACATAACCACATTTTTCCTGTTGCTCCTCGTGTTGAATGTTAT
CATGCACATGATGATGTGGGTATAATCAATACTCTTGTTTCCATCGTAGA
CTGTTAACCTGAGAACTGGGCTAAACTGATCAACTAAATAATGCACATGT
TGTACAGTATCCGGCAACATTTGAATAATGTGATGTGTTGCCAAAACCTA
CTTCCGGTCTTGTTGGTATTCATAGGTAGTCTGATTTCTTTGCAGTCCTT
ATGTTTCATATTCGTGTATTTTAATTGTTTAATTAATCCTCTAATCAGCA
ATATATTTAGGGAATGTCTGAAACAAAGTTTTTTTCCTGCGAGAATCTAG
TTAATTCCTGTGGGGATCAAGAAAAATCCTGCATTATAAATGGGTCCTTG
ATGTTCTCTTTATTTATATGAATTATTTTACTCGCCTGGTTGACAATTTC
CATCTCTCACACTAAATCATTTTACTGAATTTGCCATATTCTCTTGAAGG
GAGGATTTCCGGAAAACATATAAGGAAGAAAATCCAAGTGTAAAATCAAT
GCGGGATGTAAGTTTTCATTGTTTAAATTTTAAGCTTCAGGCTAGCTTCT
TAGTCATGTTGTGATGTAATATACCTTACACTGCAGATAGGAAGGGCATG
CGGAGAGAAATGGAATAAAATGGCATTTGAGGTTGGTATTCTCCCTCTGA
CAGCCTAATGATGATTTTGTTGCAATATGCACATAGTCACTACAAAATTG
TGTCATTTAATCTTGCTACCTGGTAGGAACTTATTGCATTGTAAGGATGG
TGTAGCATGGTTGATTAAGAATGTTTGAAGTAGAGTTGTAGTTTGGCTTC
TTTGATGATTCACTTCTTTTATGATTTTGGTTTTGGATATCAATAGAAGC
TACTTCATTTTCAAATCATTAAGTACAAGCCCTTACCTTGATATTGTATT
CATTTAGTAGCCAGGTTTATTCTACAAGCCCTTCCTTGACTGAGGGGATG
CATTGACCTACATTGTATTGTAACTGTAGAAGTTTCATTATTTGTATACT
CAGAATATATTTGTAGGGTGTCAGCTAAGATTTAGATGGATGATGATAAT
GATACGCTATTGCACAATTTCCATGGTTTAGATGTTGGTTATTAGGTGTC
TCTACTTACTAAATACACTAAAAAAATTGAATCCCTCACCTGTAGACAGT
TCTAGACAGCTGCAGTTACTTCACGTTGATGATCACAGTAACCCATGCAT
CCTTGATTATCTTTTCATAATACCTAGACTATAGGGAAAACAGAAACGGG
TCATTGCTGCAAAGTGTAGAGATCAACCTACTTCTTGGAAGCCTTAGTAC
CTGCCATATGACTCTGGAATTTCTCGTTTGAAAAAATGCATGTTGTCACA
TAATTATGTAGCGTGGTTTATTTTAATGAAAATGACATAACTATGTAGCA
GTTCTAACTTCTCGTTGAATTGTGTAACTTGGTAGAATTGCATAATAGTT
TTCTATGCCTATAAAGGAAAAAAATTATGACTCCTGGACTGAGAAATTAT
GCTTCATACTTAGTCTACTGATGTTAACATTTTCAGCTTGTTTATTGCAC
CAGGAAAAAGTGAAGTACTACGATCTAGCTACGGTAAGGCGTGCCGAGTT
TGAGAAGGCGATGGCTGAATACAACAAGAAAAAGGTGATTTTGTTTTACA
CGCATATTGCACATGTTTTATCTTTTTTTTTTCATGCGTCTGGTCATACT
TAATTCTATTTCTTCATGCAGGTAAATGGTGAATTGTCCGTGGAATAAGA
CTACGAGTAAAAGTGTGCATTGGGTTGTTGTGATGATTCCGCAAGTAACT
ACATGAATCAATCAATTGTACTATATTACATGACAGAATTCTGTAATGAC
CGCTGCTATCTATAGATAGTTGGATTCCTGGTCTTGCAATATTGTAGAGA
TGGTCAGTGTTACATGTTAGATAGATCTCAACGTGACGAAAAGCCCAACG
GCCCGTCACGCCCCTACCTGCGTCCTGATCGGGGGCGCCTAAGCCTATCT
GGTTGGTGGGCCCTTGTCGCCGCGCTATATAAAGTGGTGGAGAGCTGGCA
GCGCACGGTACGAAGTTCGCCGCTGTGCACACCCCACCTACACCAATACC
GATCTAGGGTTAGCGCGAGCTGACGGGAAGCACCGCCACCACCACACACC
CACGCCGTCGCCCCCCATTCCCCATGGCCAATGACGGCGGCTCCAACTCC
GGGACCAGTTCCGGGATCCCCTCTGGCTCGTGCTTGTCGAGCCAGGGCGC
AGGTGGTTCTCTCTTCCCTCTCTCCCTCTCCCAGAGTAGTGTCTAGATGC
CAAAGATAGAGTGCTACCGAATAGATCCAGTCTAGTCTATGGCGAAGCTA
AGCTAACAATGGTATCAGAGCCACTAGTGGCTAGATTTGTTCGGTGCAAA
AGAAATTCTAAGGAAAAGACCTAGATCTAAAGAGCGCTTGCCCTATGGCT
GCGCCTTTCCTCTCGATCTAGATGGGCATCCCTTTGGGAGACATCTAGAA
GAAGAAATACTCCTTCGGGGGCAAAGAAAACCCTAGATCTAAGCCCCAAA
AAGCATCCCAAATCAAAGACAGTCCCCAAATCCCAATCCCCATAGATCTA
TCCCCAAAACAAAAATCAAACAAAAAAAAGGAGGGTCGCTCCGGCCATCG
CCGGGAAAGTTCTGCCCCCCCACCTCGGCCACTTGACGACGGTGCACCCA
CCCTCGGGTGGATGCATGCATCGGCAAGGAGCCAAGGGGGAGGCCTCTCT
GGTCTCTGCTGCTCGAAAGGATAGATGAAAAAAAGGGGGGGACCCATCGG
CCCGCCGCCGTGCGCCAGCGATGGGCGCCGCCGCTGCGCCGCTTGACGTC
GGTGCGCCCACCCTCGGGTGGACGCGCAGCCGGCAATAAGGGCAAGGGGG
CGCCATGCTCGTGGGAGAGGGAGGGGGCCGCCGGCTGCGCCGGGCGGCGC
CGTCTCGCCTCAGTCCCCACCGGGCTGCGGACAGGAGGCCGAGAGAGAGG
GAGGGGCCCGCTGGGCGGCGCCGCCTCGCCTCGGGTCGAGCTGCGAGAGG
GGCGTGGGGAGGGAGGGGCTCGCCGCCGGCGGTGTTGCCGGGCGGCGCAG
CCGCCTCACCAAACTCCCACAGCCGCCGCCAGGCAGAGGGGACACGGGGT
GGACGCGAGGGAACGCGGGGTGGACGCGACGCCGCCGTAGAGAGGACGCG
GCGTGGACGCGTGGGGGGAAGTGAGCTAGGGTTCCAGGGGCGGCGACTGC
GGGCGCTTTTATGCCTCCGAGGGGCGCGGGCAGCCGTCCGATCTAGGGTA
GAGGCGCGGACGGCTGTGATCTGGCGCTGCGCGGGCGGCTGGGCTGTTGG
CGGGCCGCGGGACGCTGGCGGGCCATTGGGCCAAGCGGCCAAGACCGTAG
GGCGCTGGCGGGCCGCTGTGGACCGCAAGCGAGCGGGCGCTGGCTAGCTT
AGGCGCGCGCGCGTGCGGCAGCTAGCAGGGCGCGGGCGAGCTGGCCGAGC
AGGCCGTCAGGGTGGGCGGTAGATAGCCGCAGCTGGCGGGCAGGCCGCTG
GGCCACTGCAGGCCGCCCAGGGATTAGGCCTAGTAGGGCGTTCTGAACAG
TTTTTTTTTCTATTTTTCTTTTCAGAAGCTGTTTTATTTGTTTTTGCTTA
GTTTTTAAGCAATTTTTAAACAGTTTTCTCTAGTCATTTTATTTCAAGTA
TATTTTAACTAGAGAATAAAATAAAGGCAGAATTTTTTCTGCAAAGTACA
AAGTATCATGAAAGTCATTATTAATGTACATGAAAGTCATTATTAATGTT
TCCGCTGCAAATAGTTATTTTAAATTGCAATAATGCAATAAAGTTTGTTT
AAATTTTGTTATAAAGATGTGGCAAAGTAATTAAAGATGATTGTATCCCA
TGTTATTAATTGACCAACGTTATTAATAAGCATGATCATGATCGTTTTCA
TTGAGTATTAAAGGTGCATTTAACTTTATTTCTACCCAACGGTGATGTAA
TTTTAAATAGCACAAACAATTGCATGCTTAATTTATACCAACGTTGTATT
AATGCATACAGTTGTTTTCTTTGGTGATATCACATCTTTTGTGATATTTA
GGAGGTCTCAACCTCATGAGCTGTTTGAAGGACATCCCGCTGCTAAGGGG
GGACAACTACTCCGAATGGAGGAAAAAGATTGATCTGGCGTTTGTATGCG
CCGAAGTGAACTGGGTGGTTGACACCAAGCAACCAGTCAAGCCTGCTGAC
CCTGTGAGGGGCGATGCTGAGGAAAGTGCTGCGTTTGAGAAAAGAAAGAG
GGACCATGCTCCTTTGGAGCTGGCCTACTCGATAGACAATCAAAAGTGGG
TGACGCCAATAAGAAATGTTTGGCTTTTGTAAAGAACACAATTGAGAACG
CCATAGTGGGCTCAATTGGAGAGTGTGCCTCCGTGGGCGAATACCTTGCC
AAGATAAAGAGCCAGTTCAAAGATGTATGCAACCCATCTGTTAAAACAGC
TGGTGACTGAAAAGTACACGAGAGGGCCACATGGAATAAGAGAGCACATC
TTGAGGATGTCAAACATGGCAGCCAAGCTGAAGCCCATGGATGAGGACCT
CAAGCTAAAGCCTGCACTTCTGGTGCACCTTGTGATGGCCTCTCTTCCAC
AGCCATTCGAGAACTTCGTAATAAACTATAACATGTCCCCTGAAAAGTGG
GACATTGAAAAGACCATTGGGATGTGCTCCCAAGAGGAGGAAAGACTGAA
GGCCCTTCACGGTGGTTCCTTGAACTTCGTGAAGGACAATAGGAAGAGGA
GCTTCATCAACAGTAACCATGGTGGCTCACCTTCCAAGCCACATGGCAAG
GGCCCACAGCAGCACCAGTACCAGCACCAGCAGTCCACCCCTGGGGAAAA
AGACCAGTGCCACCACTGTAAAAAGGTTGGCCACTACAAGAAGGATTGTC
CAGTATGGCTGAAGTACACAATGGGCAAAAATGGTAAAGATATAGTCTCT
TTTGTTAATAAATCTTTGTATGAAAAGTTTTCTAGATCTACTTGGTGGAT
TGACTCTGGTGCAACTGTTCATGTTGCCAACTCTTTACAGGGGTTCCATT
CGACAAGGATTTTGCCAAAAAGAGAAAGACTCATTGAAGTGGCGAATGGG
ATTGAAGCAGAAGTGGAGGCTGTTGGCGACATTCCTCTGGAGCTGGCTGA
TGGCTCTTCTCTTTTGCTTAAGGATGTTCTTTTTATTCCTTCAATTCATA
GAAATTTAATAAGTGTGTCATGCTTGGACAAAGATTCTTATGAGTGTTAT
TTTGGACATGGCAAATGTTCCATTTGGTTAAAAGATATTTGTGTGGGTGT
TGCTACCCTATATGACAAGCTATATTTATTATCTTTGCATGAGAAAGTAT
TTTCTGTGTGTGATGTGAATGAACAAGTTCCCTTGTCGAACAAAGAACAA
AAGAAAAGAAAGCGAACTCTTGACTCATCGAAGTTATGGCACTGCAGATT
AGGCCATATTTCGAGGGGAAGAATAGAAAGCCTCGTTAAAAATGACATTC
TTCCTCCGTTAGAGTTCTCAGACATAGAACAATGCATAGATTGCATTAAA
GGAAAGTATGTAAAACAAATTAAAAAGGGTGCAAACCGAAGTATAGCTAC
ACTAGAAATAATCCACACGGATATTTGTGGACCATTTCCGGTGAAAAGTG
TGGATGGCTATGATTCATTCATAACATTCACGGATGATCACTCCCGATAT
GGTTATATTTATCCAATTAAAGAAAGATCTGAAGCATTGGATACATTTAA
AATTTTCAAAGCTGAAGTAGAAAATCAGCATGATAAAATAATTAAGATAG
TTCGGTCCGATCGTGGGGGGGAGTACTACGGTCGGCATACTCCATATGGT
CAAGTACCAGGACCCTTTGCAAGGTTCCTGCAAGAAAATGGAATAGTCGC
CCAGTATTCTATGCCGGGCGAACCTCAGCAAAACGGAGTAGCTGAAAGGC
GTAACCATACCCTTATGGATATGGTGCGCAGCATGATGAGCTATTCCACC
CTTCCATTGGGATTGTGGATGGAGGCGCTTAAAACCGCCATTCACATTCT
CAACAGAGTACCAAGTAAATCGGTGCCCAAAACACCGTATGAATTGTGGA
CAGGCAGAGTCCCCTCTCTACACCACTTAAGGGTCTGGGGGAGCCCAGCT
GAGGCAAAATTTTTCAATCCAAACATTGCAAAGCTAGACCCAAAAACAGT
ATCTTGCCACTTCATTGGCTATCCAGATAAGTCAAAAGGCTATCGTTTCT
ACTATCCTGACAGATACACGAAGTTTGTAGAAACGAGACATGCAATCTTC
TTGGAGGACGAATTGATGAGGGGGAGCACGGTAGCTCGGGAAATTGATCT
TGAGGAGAAGAGGGTGCATGCACCTAATCCGATGACTCAGGAGCCATTTT
TCTCGCTACCTGTTGTGCCACCATCTACAACCCCTGAGGTTGTGATGTCG
GCACCTGTTGTGACTCCACACGTGACAACAATGGGCGAAAGTTCGGAACC
TGTCCATCAGGAGCCACCTGAACCCACTGTTGAGCACGAAAGGGAGCCAG
AACAGCCTCATATTGTAAATGTGCCTGAACCCGAGGCAAGAAATGAGCAA
GAGTCTGATGAACTCAGAAGGTCTAAAAGAGAACGAAGACCAGCCATTTC
CAAAGAAATTTACAAAGTCTACAACGTAGTTCATATGGAGGGCGATCCTA
CCTCATATGAAGAAGCCATGAGTAGCCCTCACTCAGCCAAGTGGGTGGAG
GCAATGGAAGATGAAATGAAATCAATGAGTTCCAACAATGTTTGGGACTT
AGAGAAAATTCCTAAAGGAGCCAAAATAGTAGGATGCAAATGGGTCTACA
AAACAAAGTATGACTCCAATGGGAATGTAGAAAAATACAAAGCTAGACTT
GTGGCAAAAGGCTTTACGCAAAGAGAAGGCGTAGATTACAATGAGACTTT
TTTTCCGGTCTCATGTAAGGACTCCTTCAGAATCATCATGGCACTAGTTG
CACATTTTGATTTAGAGTTGCATCAAATGGATGTTAAGACGACATTTCTA
AATGGAGATTTAGAAGAAAATGTTTACATGAAACAACCCAAGGGTTTTTT
CATGGAGGGGAAGGAACATATGGGATGCCGCCTAAAGAAATCCATTTATG
GGTTAAAGCAAGCCTATGCAGTGGTATTTAAAGTTTAATGATACAATTAA
GAGTTTTGGATTCAAGGAAAATGTTGAGGACAACTGCATTTATGCAAAGT
TCAAAAATGGGAAATATATTTTCCTAATTCTGTATGTGGATGACATCCTG
CTTGCCAGCAGTGATGTTAGTCTACTACTAGAGACAAAGAAGTTCTTGTC
ATCAAATTTTGACATGAAAGACCTTGGTGAAGCTTCTTATGTTTTGGGCA
TAGAAATTCACCGAGATAGAAAGAATGGAGTGTTAGGACTGTCGCAGAAA
GCATATTGTGAAAATATTCTAAAGAAATACAATATGCATGCGAGTAATGC
AACACATGCTCCCATAGTCAAGGGCGATAGTTTTGGGAAATCCCAATGTC
CAAAGAATCAATATGAGATCGATCAAATGAAGTCAGTACCATATGCTTCG
GCTGTTGGAAGCTTACAGTATGCACAAGTCTGCACTCGCCCTGACTTAGC
ATTTATCACCGGGGTACTCGGTAGATATCAAGAGAATCTAGGCATAGAGC
ACTGGAAGATGGTAAAGAAAGCTTTGCGTTATGTGCAAGGCACAAAAGGC
CTCATGCTAACATATAGAAGATCTGATTTCCTAGAGATAAAAGGGTATTT
AGATACGGATTTTGCGGGAGATAAAGACGACAGGAAGTCCACGACAGGGT
ACGTCTTTACTCTCGCAGGAGGTGCTATTTCGTGGAGAAGCACCAAACAG
TCGATAGTTGCATCATCTACGATATATGCAGAATTTATAGCATGTTATGA
GGCCATGGGACAGGCGTTATGGTTAAAGAAACTTTTGCCCGACTTGAAAG
TGGTTGACTACATCAGCAGGCCACTAAAGATGTACTGTGACAACGAGTCC
GCAGTATTCTATGCTCACAACAACAAGTCGAGTAATGCTACAAAGTCTAT
AGATATAAAGTATTATGTTGTGAAGGACAAAGTCCAGGATCAAACTATAA
GACTCGAGCATATAAGGACAAAGGATATGCTTGCGGATCCGCTAACGAAA
GGCTTACCACCCAATGTGTTCGCCGGCATGGGTTTAACGGGAAGCCTATG
ATTCCTGGACTATAGAGGCCCAAAAGTAACAGGATTTGTTTCAAAACATG
AAGGTATATAGTGGGAGTGGCTGTCTGATTCTATCGGCAATTGAGCTGAG
ACGATGAAACATGCTCTATGTATCGTTCTGTGATGGAATAAGTAAAGAAT
AAAGTTAAAAATAAAGTCGAGATCTAGGGGAAGAATGTTAGATAGATCTC
AACGTGACGAAGCCCAACGGCCCGTCACGCCCCTAACTGCGCCCTGATCG
GGGGCGCCCAACCCTATCTGGTTGGTGGGCCCCCGTCGCCGCGCTATATA
AAGTGGTGGGGAGCTGGCAGCGCATGGTACGGGGTTCGTCGCTGTGCCAA
CACCCTACCTACACCCCTACCGATCTAGGGTTAGCGCGAGCCGACGGGAA
GCACCGCCACCACTGCACACCCACGCCGTCGCCCCCCATTCCCCATGGCC
AATGACAGCGGCTCCAGCTCCAGGACCAGTTCCGGGATCCCCTCTGGCTC
GTGCTTGTCGAGCCAGGGCGCAGGTGGTTCTCTCTTCCCTCTCTCCCTCT
CCCAGACTAGTGTCTAGATGCCAAAGATAGAGTGCTACCGAATAGATCCA
GTCTAGTCTATGGCGAAGCTAAGCTAACATTACACTGACTCCGTGTACTG
GTGCCAGAACATTGTTTTGTGCTGTGTAGCGCGTTGTACGTGTGCTGTTC
TCCCGTGAAATTTCAGTGGCCCTAATCATAACGCAGCCTCTCGCGTATAG
GATGTTTAAGTTT

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.