Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA042571

[Submit comment/correction]

Sequence	AA042571
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA042571
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	TAGTCTCGTGCTCGCCCCCTGACTCGCTCTTCCTACCTCCGTGGGGCCCG GTGGCCCACCGTAGCTCCAGGGCTCCGTCCCCCATTGCGATGCCTTCCCT TCCCCATTCCATCAGGCTGGTGAGTACGCGACGAATCGATGGCTTGCGAT AGAAAATATCAATCCATGCTCTGCTCCCGTTCCGCACCAAAACAGTTCGG ATTCTCTGCCGTCGCACCATCCCTGCCATCTCCGACCACCTCCTGATCCG TCTTCCTCAAAGTGGCAGCAGGAGATGGAGGCCAGCCGCGAGCGTATAAC CAGTTCCACTTCCCGACGCCATTCAGAGCAGTTCGTCAACATTCGCAAAC CCAGCCAGAGGTTAGTCCACCTTTCTGATGTTCTGTAATTTTCTCCCTTT CTTTCTGTGCTGCTGCTGCTGCTGCTGCTATGGATTCCCATTCAGTATCT TTCCAGTTTATTGCACACCATGTGTTTGTGTGAATGGCTGAGGAGCAGCA CGCTTGATTAACTAACAATGAGATATGGTGTAGGATCCAACTGATCAAGT TAATTAATAATACATATAACTTCACGGTGCAACTGCTTGATGGAACCATC AACGGCTAGGGCTGATCCAAACAAAATGTGTCATGAAATGATTAGTCCTT ATATTTTTTAACCTTGCATAAAGTATATTCAACAATTCTAACCTTGATGG GTTGTTAAATCTTCACAAGCTTGGGGCCAATGCAATTATCACACAGAGTC ACTAGCAATGTGCCAAACTTGAGCCATGGTGAAGAAGATTCCTTTTATTA CCTGGTCTGTAAACTGAACTACAGAAGTGACTGTTTAAACTTCTAGACGA TGTACTCAAATATCATTTTTTTGCAGCATTCTTGCTAAAAAGAAGACCTT CGTGCTTCATGCGCAAACTTTTAATGTGATCAATGGATGTTCTCACTCTG GAAACAAACTTCCCATCCAGGTAAAATTGCTTGGGATGCTAATGATTTAT ATACAGGACATAATCAAGAAGTATGATCAAGGTGCCACAAATTTTGTGGG TGAATTCGAGGAATCTAAAATCCAAAGCTGATCTGTGATTTTTACGTCAA ATAATTATGTGCTGTGGTTTTGTGAATTACTCCTAACATATTGTAGCATA TATTTATCACATGGAACCATCTGTCTGCATATACATGGTTTTATCTTGAA TTAAAATATTATTTACCTACTATAAGAAACGTCAATTTTTTCTTAAAAAA ATACTAATGTGATAGCACATTATAAACTTTTGTTACTCCATTTTTGTATC TTAAACAAAAAATAATGTCACACATTTTTTCTCCGATCCAATGCACAGTG AGGATTTAGATGGTTTCAATATTTGGGATCGAATACCTAAGGCTTAAAGC AATGCGCTCACCTACATTGAGGCCATGTGATTGAAAATTCTGGACCAGGA CAACTTGATAGACCATGTGATTGAAAATTCTGGACCAGGACAACTTGATA GAAGCATACTAATACAAGAGATATGCCTTTCTTTTTTATGTGACCAGCTC TGCATATGAATCACATAGCTGCTTTTCTGATGGCCCCCTCTATATTACAA TTGAAAAATAGAGAAAATAAACTTCCTCTTTTATTACGTACTGGGTTGAA TTTCACTTCTATTTGATTCAGAGAGGTGAGAAACATGTGGTGAAAGAACA CATGACCCATGACCTTTGTCTTCATCCTCTTAGAAGCCTTCTCTATGTGC TAAACTTGATTGAATGTGCTATCTGCCTTCAACTTGAAATTCTAATCTTA TGCCAATAAGTGAAGATATATGATGGACACTGTACCATGTTTGAGTTCCA ATAATTCATGTTATAACTTGCCATGCTCTTTTCTGCCATCTTCTAACCAC TTGGGTCATTTTTATCATATACCGCGAGACATATTTGTTTACTAAATGGG TCCTTTGCTTCTGGTTATTTGTTCGTGCCTTTAACTTTTTATTACTTGAT GCATTTTTTGGCTGCAGCTAAAGGTACACGAAGATGGACGGTTTTCCATT TACACAACGATCATGGAAACATCGGATCCACTGAAGTATCTGGCTGAAAA CCAGTTGTTGCCTCCTTCCAATCATCAAGCTAACTGACAGGTGCCTTTCA TTGTACGCTAGATCACTTGCATCGATCCTCTATTGCTTCTGTAATCACAC CATCGTGACGGGTTTCTTTTTCTCTTCGTTTTACATTCCTTCTGTATACC CTTGCTATGCTTCTGCAGCTGCTACTATGACATCATGTTATCTTGATTTC TACATCCTTTAACTGAGAATTCTATATTTATAACACTATAAGAATTTGGC ATCATCTCGTTGCTATCTGCCTTCAACAGTATTGGATAATCCTATATAAG GATCATGCTTTTATAACATGTATATCTAGAATAATATCGTCCATTTAACT ATTTTTTGTCTATTTATGTTAAGCCTAAGATTAAGATGTTATGTCCAAAA TACATGTATCTTTATTCACGTGGAACCATAATTCATTCAATCAGTTCAAA ATATCTAAAATATTCGAACCATCCAAGCATCCCCAAGTCCTTGTATCTTT TCTTCATTAGAATGGACGAGCGCGGCAACACACGCCTTTACGTTCTAGTT GATATTGACAATCTAGAAAGGCTGGGGATGTGGGAGTAGCAGGCTTTCTT GGCACATAACAACACAGAACCTGTGGTTATCCTGTGGCCTATCAAGGGTA TAGATGGTCTCCAACGTCACAGTCTTAGGATCGTAGTAGCCTAATGACCT CCCGGTGCTGAGCAAAATATGCCCAATCAGCACATGATAGAATGTACGAT CAGGAAAACTCAATGCCGGCACCACATCCACCATTAGCATCACTGAGGCT GCTGACATACTCCAATCAACGAACCTTTGATAACAAATCAGTGCCATCAG CATAAGTAAACAAATCAACATCTAGAGACTTTTCCTAATATAAGATTCAC CATTCTAGAATAAAAAGTCAACTTCTCTGGACAATTTATAAGAGATATCA TCTACATGTTTAGGCTCCTAAACATTTTTCACAATCTGCAGGTTTAACAC TACTCATGCAAAACAGAACTTACTGGCCTACCAGTAATTGATGATATGTC AGGGCCAAGTTAGAAATCTACTAAATAGTACCACACATACATCTGGTAGA AAAATTTCAGTTCAGATTCATCCTTTCCCAAAGCCTTTACCTACATAATT AGACAAAAAATACATCTTAGATTGAGAATCCAAGATACATGAGTTAAGTC ATGACCTTTAGTTGTCCAGAATTGTGACAATACACATAAAATTGAGAACA AGAATTAAATGCATGCAAATCAAGATATTGGAACAAACGGGAGCAATTTC GTGTTACTGAGGTTCACTAACAAGGACGGTGTGCTGTAGGCCTGTGCGCC GTAATGATGTTGTCCTGCTGGCCGCGACGACGGGATCGAGGCAAATGTCT TGCTGGTCGTGCGACAGAAGGCCTGCATGTGCTGAAGGGTAGAGAAAGTC GGCGTGTCTGAGGCTTCGGCGCAATATCGCGCTAGCTGCCCTGCTAGCCG CACGACTAAAGGGGAGAGAAGGTCGGAGTGGAGGATGACGTGACGTCGGT GGCGTCGATGGAGAGAGGAGAAGCAGCACGATTGCTGGCGAGGGAAAACG GCGACGACTCGCGGCATAGGCAGAGCAGCGGCGGCGTCCTCACGTCTGGC AAAGGAGGAGCGGTAGGAAGCCCAAGAGATTGGCGAAGCACATGGGGAGC TAAGCCGGCAGTACCGATGGCCAGGCCCTAGCCGCACATGCACCCCAAGT ACAGTTAGGATTAGCTGTGTGGGCGCATACCCCAAGTACAGTTAGGATTA GCTGTGTGGGCGCGTACGTAGGCGTAGATCAGCGGCGACTGGAGCGGGGG CAGCCAAGGCAATGCGATGGTCTCGAGCAGGCAGGGCGGCGCCGCGGTTG GGAAAAAACGCATCGTGGCACCGGTGTGTAGATGGAAGCGGATCGAGGAA GGAAAGTGGAGGAACACGGCGAGTAATTAGCGGGCAATCAATTAGTATAT ATTATTTCTTACGGAACCGGTAATGGGGCTAGGATTTTTCCTCTGCCAGT GGAGTTTGTTCAGTCAAGGTAAATTACTAAGTGCACACAAGACAACAATT AGATTAATCCTAGCTGTTAGATTGACTTTGGTGGGCCTAATCAAACGATG GCAATGGGTCAGTGTACAATTTTAGGGGTGCGTCTAGAGAAACTAATGTT TGCTCTTTTATTAGTAGTAGAGATTACTTGATGCATTTTTGGTTGCAGCT AAAGGTACACGAAGATGGCCGGCTTTCCATTTACAACGATCATGGAAACA TCGGATCCATTGAAGCATTTGGCTGAGAACCAGTTGTTGCCTCCTTCCAA TCATCAAGCTAACTACCAGGTGCCTTCCATTGTACACTAGATCACTTTCA TCGATCCTTTATTGCTTCTCTAAACACCCCATGGTGACGGGTTTCTTTTT CTCTTAATTTTACAATCCTTGTGTATATGCATGCTGTGCTTCTGCAGCTG CTACTATGGCATCATGTTATCTTGATTTCTGCATCCTTTAACTGAGAATT CTATATTTATAACACTAAGAATTTGGCATCATCTCGTTGCTATCTGCCTT CAACAGTATTGGATAATCCTATATAAGGATCATGCTTTTCTAACAAGTAT CTAATATCGTCCATTTAACTATTTTTTATCTATTTATGGTAAGCTTAAGA TAAAGATGTTATGTCCAAAAAATACATGTATCTGCATTCACGTTGAATCA TAATTCATTCAATCAGTTCAAAATATCTAAAATATTCGAACCATCCAAGC ATTCTCAAGTACTTGTATCTTTCCTTCATTAGAATGGATGGATGATCGTG GCAACACAAGCCTTTACATTCTAGTTGACGTTGACAATCTAGAAAGGCTG GGGATGTGGGAGTAGTAGGCTTTCTTGACACATAATAGCACAGAACCTGT GGTTATCCTGTGGCCTATCGAGGGTATAGATGATCTCCAACGTCACAGTC TTAGGATCGTAGTAGCCTAATGACCGCCCGGTGCTGAGCAAAATACGTCC ATCCACTGGATTGATACCCATCAGTGTGGTTCTGTCGGGACTGTACTCTG GCAAGAACAATCCAAGCTCTATACGATATTCCAGGCTCCAAGCTCGATTG TCCCTCATCATCCATACGTCAATGGTATCTGTGTCCCTGTTTGAACAAGT CACACAAATGGCACCATGGAGCTCTAGGACGGACATGCGCCCATTTTCTT GTTTGCACGGTGGGCCTTGGAGGACCTCAAATTTTCCACCCATAGTGGTG CTGCAAACCACTAGCTCACATGCCGCGGAGGATTCCAGCAGATGCTCAGG CTCTACTATCCAGTAAATCTTGCCTTGAACATATGCAGGTGGGATGTCAG CCACTGGCCTAGATGGAGGGTCAATCTCAAACCATTCCAATTCCTGACTT TGTAGGTATCTCATACTGCACTCCATGATGTAGTCCCCTGTTTCCGAGTC CTTTTTGTAGGAAAGATACACGATCACATGATCACCGATATCTGAGTTGT ACCCTAACCCCAAGGGAATGTGGCCGAAAGGAGACTCTTCTTGATCTCGT AGGAAGGCATGGTAGCCAATGGCAGGATTGCACACAAATTCTGAACCATT GCAGTACCCCAGATTGAGGCCATGGCAAGGCTGTGAACATTGAAACCGTC CAGACGTAGCTTCAGGCAGAAACATGGGGCTGATGCCATCCACGTTAACG AAAGAGCCAAAGGAGCGATCCATGACAAACTTGAGCGAAGGGGGTCGGTT GATCGAGTTTGCATGGATGGCGTGAGATCGGATGAAACGATCTGTGGTGA TCAAGGCTTGCCACTCCCTGCACACAAGGCTTAGCTCCACGACTGACCGT GCCGGCAACCACTTGAGGACGTCTGACCAAGCTTTTGTCGACGGTGACGA GAAGACCATCTCCTCGATGGTGCGGCCCACGGGCACAAGACTCTCCTCGA ATAGGGCTGGTGCTGAAAGACGGTGGGAAATGCAGTTTTCCTGTGGCTCG TACAGAACCTCTGGTGTGCCGACATGAGGATCTATGGTAAGCACCTTGCA AGTCCCCGTCCCAAACATAATCTTCTTCTTCCCCTTGTCAACATTGTGCA TCCTAAGTGGAGTGATCCAGGCGGGCGGTTGCAGCATCATGCGCTGAGGT TCCGACCATGCCGATGGATCGATGCAGCAAAACAGCTCCCAGTACTGCTG CGCGTCGTGACCTCTGAGTAGCCATATACGGTACAAGCTGGCCGTCATAT CACCCCCATGGCAGAGACATAGGCACCCGTCGAGCTCTGTCATGACGACC CAGTTGTGCTCATCTGCTGGTGGGAAGGCGGCGGGGGCCGACAGGGAACT AAAAGTCTCGCTGTTGATGTCTAAAGTGATGATGGCACCGTCCAGGCAAA GGAAATGCAGGCGTCCGTTCAAGAACACGGGGTCTCCATCTCCGTCGTCC AGGATGTACGAAGGAGGCTGCTGGGCCGTCGGCCTCCAGTACGCCGCCGT GCCGAGGACAAAGACCTCGCTGCAGGGCGCTGCCCCGGTGGCCTCGTCGA AGCTGAACAGACGCACGACTTTGTACTCATTGCTTGCCGAGCTGTACCCA AGGCCATAGGCTTCATCCTCGTAGCACGGCGGATGGGGCCGAGCTGGCGT TCCTCGCTGCGAGTTCGTCTTTCGTGGCTCTTTCGAGTCGGGGAGACGCA AGATCGCGCCTGTACAAGGGTTGCAGACATAGTGGCCGCGCTGGTCCTCG GGACGCTGGACGTAGACCAGCACGAGGCCGTGCAGAGTCTTGGTACAAAG AAACGGGTTCAACAGATCGTGGCGCGTGAGCTTCTTGATGGCCGGACCGT CGCCGGGCTGCCAAGTGCACAAGTAGCGGTCCGCCGCCGAGGGGTCGCTC GAATGGGTGGCGAAGAAGAACTTGGGCTGGCTGTTGGCTCGCTGGAGATG GAGCTGGATGAATGACGGCGATGAGAGCCTGTGGTTCCACGAGCGCGACA CGCAGCGGCAGCGGGCGGCGGACTTGGCCGGCATGTAGGGGAGGATCTCC GAGAAGAGGATGTCCTCAGGCAACGACCGCCGGTCCTTCTTATTAGAGGC CATGATGGGATAGTTGCTAGGCCGCCGATCAATAGACGATAGATCGGAGC TTCCTACTCTGTTTATCTCCCCACGGTGTTACAAGTTTGCGAGGGTCAAG ACTTCTGCTGGCAGAAGTCCTGAATTTACTAGCTAGACCCACGGCTGATT GCTTCTAATACGACTTAAACACGACTCACTAGTAGTACTAGACATGGACA AGGACAAGTCCTACCTAGTGTCCCGCTAACACACGATACTACCGAACTAC CACATGGAAATCAATTTTTTTTTAACATGGAGGATTTGCCTCATTCAATC TATATACGGAGTAATCTATAGTAACTAGCAGAGTGCCCGTGCGTTGCTAC GGGTTTATTTATACTAAATATTGTGTTGTAGTTTTTTATTATTAAAACGA AATATTTTTCTTAATGGGTCGAGTGACTTAGAGAAGTAGTCTTGTATTGT ATATATGTCAATCATTGTTTGTGGAACTTCTTAGTAATGCGCTACCACTC TTACCCCCTTATCGGAGAACTCTACGCGCCCTTCACTACCTTGTGGATAA TGAGAAGGCGGTCACTCCATAATTTGATGATGTAGCGCATTCCCTCGTGC CGATGTAGCCTTTATCGCCACACTAATAACAATCTTAAATCTAGAGATCT TGGTCACACTGGTGCTGTCGCAGCTGAGGTCTAACGCAAGGGGAGCCAAA TTACCACCTTGCTGATATAGGTTTCGTCCTTACATTGACCTCCTGTATAG GGTGAAGAACATTTATATGTGTGAGTCAACGTCTTCACCTATACATAGCT TTCATGTATTGTCTGCTCTCAGACAAGTAGCGACACGCGCACAACAAGAG TCTGAATCAAGGGGAAGGGGCTTTATTTTGCTGTTGCATGCTTCTTATTG TACAAAGTGCAGTCGTGTTCTCTAAAACCTAACAGCCACATCCTAATATG CTATGATTCCGTACTCTCAATTCAGATAAACCGGGCTTCGGAGTTCAGGC TTTCAGTAAATGGTCAGCACGAGCCACATCGTCTCAGGGTTGCTTTAAGG AGTTTAATGGATTAGGATGACATGCTTAGTTAGCTAGATGCATGGACGGA GTGAACAGATTATCGGCCGTATAAATGCTAGATGCTGCAGCGTTCGCCTT GAGACTGAGAAACTGCAATTCTTCTTTTTCTTCAGTTTCAAATACCATAT GACAACATCATACTAAAATGCAAGTAGAAAAAAGTTACTGCTCTCATCAG GGATGTGGTTGTCGTGACAAATTTTCAGGAAAGGAAGTAGTGCTTCCATT CCCCAGGCTGGCAGCATTTCAGAAAGTGATCAAGTGATTCAGCTTACACA ACATATATGCAGCAAGATCAAACCAAAGCTCGACTTAAATTGCTGGCATC CTCATACAGTGACATGATCCTTCCATGGCTAGCAATTAGCCTCCAGTCCA GGACGTTTTTGTCGCTCTACAGTTAAGAATGAGGACGCACCGTCGCTAGT GTAGAGTACTAATCAAATTGGCTAGAGTTGAAGCAAGAAGATCACCGCGT CGATTGATAGCATATATAGAGGGTTGTAACAAAGCTATGGAGAGCTGAAA CATGGTTGACGTATAATCATATGTGCCAGTGGCTGGGGCTTGCCGCAAGA CCGTGTACACACAAAACTATCTAGCTCCCAGCTACAACATTTTCGCTCTC TATTTCTGAAATTGCAACAGCAAGTACACAATTAAACAATATAGCGACAG TGTCAGTTTTTAACTATGTAGCTGGACAGGTTTTGTTTTGCTAGGCTCTG GTCAGAATATTTTGCTAGACGGTCACGCTGTACATGCTCGGGCGCGCCCT GTACAGATCGATTCAATCAAGGTCACATACCGTACTTGTCTTTTGTAGAA GCGTCTGGCGGATGCCATTTCTCTCTCTTACTTTCCCCTTCCACGCGAAT CCAGAATACGGCGCTGTTTTTCTCCGCCGCCGCCGGCAGCATCCTCGCCG CCAAGCAACACTCCAGCCCTCCATCCTAATCGTCTCTTTTTGGTCTGATC TTCCTTCTGCCTCTTCTCCACTCCCATTTGTTTATCCTTTATCTGATTTC TTCTGGTCAATCGATCCCCAATCGTCCTAATCTTCCTCCCCACCCAAAAA AATCCCCAAAACATTAAATTTCAGAAACACCTAGTAGAACGGAAAGGAAA AGTGTGATATACACCCTGCGGATGCTCCGCCGCCATTGGTTCCCTCCTTC TCCAATAATTTCATCCATCGTAGCAGCTTACCATCCATCTTAGATAACGC GTACGCCTGATCAATCTCCACCCTCGATTTCTTCTGCTTCCGCTGACCAG GTCCGCTGCCGCCGCGCGAGGCTTGGCTGCAAAGGACCAGGAGGGGCTGG GTGGCAGGGGAGGAGGCTAGGGTTTGGGAGGCGGCTAGATTGGGGACACG GGGAGGCTGCTTCGGTGGGGGAATCGGTGGGGGAATCGGCCGCAGAGAGG TCGCTTGGCTGCGCTGGCGAGCGGCAGGGTTAGGGGAGGTCCGCGAGGTC GAGGAGGTGCAGGGTGGGGTGGCCGGCGGCATGGCTGCGTGACTGGGGGC AGCAGACGGGGACGGAGAGGGA

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.