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GrainGenes Sequence Report: AA015888

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Sequence
AA015888
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA015888
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
ATGTTCTCGTGTAGGAGGATTTTCTGGCTGGGCGATATGAACTACCGGAT
CGACGTGCCGTACGACAGAGCGCACGGCCTGGTCGCAGCCATGGACTGGT
CTCAGCTGGCCGAGAAAGATCAGGTGCCTGAAGAATCACTTCCAGTCTTT
TTCTTATTGAACTGCTACTAATTACTAAACGATTCTGCATCTGAATTTGG
TTTCTTTTCTTCAGCTGAAGCGGGAGCTGAGGAGGGTGGGGTGTTCGACG
GCTGGAGCGAGGGGGCACTGGAGTTCGCGCCGACGTACAGGTACGAGATC
GGGTCGGGCTACAGTATTCAGAGGCACTCTAAAGTGCCTCCAATAGTTAA
ATTAGTGTTACAATTAAGTTTTTGAGGCACTAAAAAAGTGCTGGGGACGG
TCGTGTAGGTAAAAGTTTTTTGAGGCAGTTTTAAAAAGTGCCTCTAATCA
TAGTTAATTGAGGCACTATGACTAATGCCTCTAAATCCTAGCCAATTGAG
GCATTATGACTAGTGCCTCAAAAACCAACTTAAGGCACAAATTAGAGTGC
CTCTAAACCCAACTTTTTGAGGCACTATGCATAGTGCCTCAAAAAACCAG
CTTTTTGAGGCACTATGCATAGTGCCTAAAAAACCCAACTTTTTGAGGCA
CTATCCATAGTGCCTCAAAAAACCAGCTTTTTGAGGCACTATCCATAGTG
CCTCTAAAACCAAGCTTTTTGAGGCACTATCCATAGTGCCTTAAAAAACC
AGCTTTTTGAGGCACTATCCATAGTGCCTCTAAAACCTAGCTTTTTGAGG
CACTATCCATAGTGCCTCTAAAACCCAACTTTTTGAGGCACCATGGATAG
TGCCTCTAAATCCTAGCCAAAAGCAAATGTGTACTACAGTGACATATCTG
TAGCAGCATATTACAGTCATATCTTACAGTCATATTACAGTGGCCTGCAT
GTGATGGCTAACATATATTACAAACCACATTACAAACCACATTATAGTCA
TATCTTACAGTAACATTACAAACCACATATATTACAAACCACATTATAGT
CATATCTTACAGTCATATTTTACAGTCATATCTTACATTTGTTCACAGCC
ATATCTTACAGTCATATCCCACAACCATTGTTCACAGCCATATCTTACAA
CTGAGACCATGCAATATCATCAGCTGCTTGGCAATCCCTTGTGTGAGCTG
TCTGAGTTTGAGACCATGCAATATCATCAGTCTGCATTTTTAAGATTTGT
CAGTGTAATCCCTTGTCTGAGCTAGTTCAACAGTTCAACATTTTCAACAA
AAAGAAGCAGCTAGTTGAACAGAAGGAGCAGCTAGTTCAACAATAGTATG
CATTGTTCAGACTAGTTTAGGAGTTTACTTACCTTGTGTGGTACTGAATC
TGTAGCAGCAGGAGAAGCATCTTGCTTCTGTACTCTTGATCTTGGTTTCT
TTTCTCTAACTTTTGTCTGGCTCATGTCTGGTTCATCCAGAATCTGCACA
TTTTTTAGTTTATAGTGTTGTCAGTGTAATATTCTGATCAACTGTAATAG
TTTACAACTGTAACTTGCCTTGTCTGGTAATTGCGAATCTGTTGTAGCTA
TAGCAGCACGAGCAGCAGTTTGCTTCGGTACTCTTGATCTTGGTTTCTTG
ATCTTTGTTTCCTGGCTCATGACTTGTTCATCCACAAGCTGCACATTTTT
TCATGTGTTAGTACATGAAACAGTTCAGATATTGCTGGAGCAAAAGCAGT
ACATGTAACATACCTTTTCATGCATTTGAGACTATGTGTTAGCAGAAGCA
GTAGCAGTAGCAGCAGTTTGTTTCTGGTTTCTGAAATTTGGTTTCTTCAC
TCTACCTTTTGCCTGGATCATGACTGGTTCCTCCATAATTACTTTGCTGA
CTGGTTCATCCAGAAGCTACACATTTTTTCATGTATTAGTATATGAAACA
GTTCAGATATTGCTGGAGCAGAAGCAATATATGTAACATACCTTTTCATT
CATTTGAGACTCTGTGTTAGCAGAAGCAGTAGCAGTAGCAGAAGCATAAA
CAGCAGAAGGATTTTCTTCAAGAGTTGTTCCTTGTGCACCAGTACCCTGC
TGAGTCAATATGTTAGTAGGAGCAAAAGCATAAAAAATACTGCTGAGTGA
TAACTTCTGAGTTCTATAATCATACTGCACATGCCTGTTCAGTAGGAGCA
AATTTCTTATTAGCTCCTGGCTTCCCTGGCACCTTGACTGAGTTTTGTCT
ATTAATTTTGTTTTGCAGATTTTTTTCATATAAATCTCTTAATGTAACCT
GCACATATTTAAGAAATACTGAGTAGGAGCACCTTGACTGAGTAGGAGCA
GATTTTTTTCATACAAAGTTTAAGAAATACTAACATGATTCCTTGGCCAT
GGAATGCACTTAGCTTGCGCATTTCCCATCCTTGTCATTCTCCCAAGTGG
TCTAGGCAGTACGGTTGTATCACGGTAGACAATGTTGACCATGACCTCCA
CATAATCACTTAGTGGATCTCCATCTAAACCAACTGCATTTATATCTGCA
GTTTGAATTGTTCCAAGAGCTGCAAGGTTAGAAGAATTTGGTGAAGTCAA
GACAACTTCCATTCCTCTACTTATTCTGGGCTTTGGGATGGTGTTGCAAA
TGTTTGACTTCTTCATCTCTTGAGCTTTCTCTAGTTTAATTTTCTTTATC
ATAGCAACCTGCATTTAGTTAAATTCCTAGTCAGCAAGAGTTACAACGTA
CAAGAAAAAACACACGTACAAGGATTTCTTATTGACACATGTACAAGCAG
TAGTTATTTTACCTCAGCAGTTTCATTCTTCGCAAGATTAACTTCATTTC
CAATCTTTTCTTCTACCCTTTGCCTTTTCCTTTTCTTGTCATCTACTGCT
TTCTTCTCCTCCTGACCACTGTTCTTCATCTTGTCAAATCCTTCTGATTC
TTCAACAAGAGGTTCTTCAATATGTTCTTTGATTCTCTTCTGTGATGTTT
GAAATAGCTCCATCATCTGACAATACTTCTCTTCTAGCTTATCACTTCTG
GCTACCAAACTTGACTGAGTTTCTACAAGCTTCTCTACAACACCCCTGAG
ATTTTTGTTTTCCTGTGTAACATCATGTAGAGCAGATAGAGCCAGCGCCA
ACTTCTCACTGTTCCTTCCACCAACAGTGAGCCCTAATCCATGATTACTT
GACTTCTTAGCCTTTGGGAACAATGTTGAATACAAATCTTCCTCATTTGC
TTCCTCATGTATCAAGTTTGGGTTGTCCACAAACTTCACATTTATCTCTT
CCTGTTTGCAACATTACAAAGAATGAGGAACATGTAATGGATATTTGCAA
GATTGACTCAAACCGAAGATAAACAAAAGAAGTTACAACATTGAATCCAT
GTTTGCAACATTACAAACATGGATACAGGTTTATTGAAGTATTGATAGCT
CAGAATTGTAGCTCAGAACAGTTTATTGAGTTTTCAATATATAATATGTA
TGTGGACATGACAAAATTCAATATATACTACATTATTACTTACAATCTTT
TTCTTGCAAAATTCATCAACTGGTTTCCCATCCTTATTTGTATGTGTAAT
TCTGTAAAGCTGAGCTCTGGATATTTTTCTCCCTTCTTTTATTTCCTGAA
ATTCATGGAAAACTATCATACTGTGATCTTTGAAAATTTTAGATATTCAA
GTATGCAACAAATCCACAATTAACTTACTTCTTGTTCATGTACTACTGCA
AAACTTCTAGTACCAGCTGTATGAACTGCATTTGCTTGACAATTTCTCGT
CTCTTTGTTCTTCATACTTAATGCCTACATTACAGCAAGAAATTATACAT
TAATGCCTATAGTATGAATTAGCACAAGCAGGTTGAAAAAATGGTATATC
CAGCATTGCTACTTTAGTATACCTTAGACTTTGGTGTTCTCCAAAATTTA
CATAGCCAAACCCACTGAGCAGGAGGTATCCTGGATTTGCATCCATTGGC
AATGTTGCTTTTGAGTGACAACTCATCCTTGTAAAATTTTCTCTTTAAAT
AGCACTTGTAATCTTTCCACTTCTTTCTAGCAGATATCAACACCCAGCAC
TTGTAACAATCTGGTATTTCAAAGAAATACTGCAAAAGTGTTTACAGTTA
GGCAACATTAGTAATTTGCAGGCAAAAAACATAGTTCAGAACTACAATCC
AGTTTATTTAAGAGATTTTACCTTAACTGTCTTCCATAGCTTATCTTTTT
CCTATTCAGGAACTTTGCTCCAATTGGTAGCTGCCAAAGAAATTTCTTTT
CCCTTAACTAAAGAAGCAATGAAATTTGTGAGCCTGCAAGTTTTGAACCC
ACAAGGTTGGCCTTTGCTGTTAAATTCCAAACTGATCTTGTTTCTTGGAT
CATACTCTTTCCAGAATCTTTTCAACTTAGTGGGCCCTCTCACAGACTTC
TCTGTTGTTGTCATGTAATAAGTATTTAAATTAACCAATGTGTCATCCAT
TTCACAATATTCAAATAAATTGCCTAAATTAACAAGAGGAGAAGGCAACC
TAAAACTAACCTTCCTGTAACTGTTGATTGATATCACCTTCTTCATTTTC
ATCATGAGTAGTAGCATCACTATCATAATGTTCACTACCATCATCATCCT
CATCCTCATTTTCTACCACATCTATTTCTTCATATATCATGTTGTTCTAA
ATTAAGACAGGAACATAAATCACATATTAGAATGGCATAAATTAGGTGCT
TCATATGCTTTCACATAAATCACATATTAGAATGGCATAAATTAGAATGG
CATAAATTAGAATGGCATAAATTAGATTCTTACTTCTGCTGGTTCTTTGT
ATATTCCTTTTATCCTTGCTTCCTCAAGAAATCTTGTAAAAATTTCTCCA
CTCTTGATTTCTATCTGTGTTGGTGGCACACCAAGTTTCATCAGTTGCAT
GTTAACCTCATTTAGCCTACTTCTCTGACTGTCCATGTTAGCAGTCCCTG
CAGAAGAAACAATAGAACTTTATTACCATGTTCAACAGAATCAAACCAGC
AAACAAAAGAAACAATAGAACTATATCAAAATACCTAGACACAACAACAA
ACCATTCATTATCAATTGGATCTTGCAAATAGTAGACCTGTTTTGCTTGA
CTAGCTAGTATAAATGGCATAGATGAAAGAATTTCCCCTTTGTCTACATG
ATTGAAGTTGACTTCAGTTATTCCAAATTCATCTACTCTAATTCCAGTAT
CTTTAACCCATTCACACTTGAATAATACTACACTAGCTGTGTTTGAATAA
TTCAATTCAACTATTTCATGGATCCTGCCACAAATTTGACCATCTCCTAA
TGTGTGATCTACTGAATAACTTAATGTCTTTGTAGTAGTTGAAACTCCAT
CACACTGGGAAGATTTTCCAGTAGAATGGCTTCTTGTGTGGAATGTATAG
CCATTAATCTTGTAGCTGTTGTATTTCTTCACCATCATGAAAGGCTTTTG
TGCTAGTAGAACAACTTCTTGTGGTAGTTCAACTCCTTTATGCATTAAAG
AATGCACATGTTCAATAAACCATTTCAGGAATTGTTGGTGGTGAGCAACT
TCAACTTCTCTTCTACTTTTCCTTCTGTCTGCTTGTAGCATTGTGATATG
CTCATTTGCAAACCTATTAATTTCTGGATAACTAAGCAACACATGCCTTT
GAGCTTGTGTCCATGAAATGTGATCTAGCTCATCTACTTGAAATGCAGAG
AGCTGTCTTCCAATTGTTCTTAAATATATATTAGTGTCTGGACTGCTAGT
TGTGCTATCATCAGTATGCATTGTCTCTTTGTTGGAATTTTCCAGATATC
TTGCACAAAAATCCAAGCTCTCATCAAATATATATCCCTCAGTTATTGAT
GCTTCAGGATGTCTTCTAGTATGTACCATCCCTTTACACTTCCCAACAAA
CATCTCTGTAGACCACATGTTTCTGAATTGCACTGGTCCACCTATCAACA
CTTCACTTGCAAGATGGATGACAAGATGTTCCATTATATCAAAGAATGAT
GGTGGAAAAATCTGCTCTAGCTGACACATTGTTTCAGCAATTTCTTCTTC
CAACTTTTGCATCTCAGTAGGATCTATGACTTTGGAGCAAACTTTCTTGA
AGTACTTGCTAAGATTAATTAGTGGAAGAGCAACAGGGGCAGGCATGGTT
CTACTTATAGCTAAAGGAAATACATCTTCAAAAATTATGTGGCAGTCATG
AGTTTTTAGCCCAACTAATTTTTTCTCATCTAACCTGACCTTCCCATCCA
TGTTTGAAGCATAGTCTACTGGAAACCTTGCATTTTTCACAACTGAGCAG
AATACCTTCTTATTATCTGAATTCATGTAGTGCATTGCTTCAGGCAAGTC
TGGTTTCTCTTGAGTTTCATCAACATGGAGATGTGTTCTGATTTTAAATC
TTTTCATATCCAGTCTTGCTTTCACATTATCTTTGGACCTGTTGTCCACT
TGTAAAATTGTGTGAACAATATTATCAAACACATTCTTCTCTATATACAT
TGAGTCCAAATTATGTCGAACCAGCAAATGTTCCCAATATTCAAGCTGGA
AAAATATGCTTCTCTTCTTGAATGTTGACTCTATAGTGTGCACATCCTCC
AGTACAGTATCTTCCTCCCCTTCATCTCTTTGTCTCTTTTTCTTCTTAGA
CTTTTGTTGTTTCTGTGTTTTCCCATAGATGGTGTGAATGCCTTTTGTCA
TTTCTGAAATCTCATGACCTGATGGCTGAATTGGAGGTTCCCTGTCTTCA
GTTGTGCCATCAAATGAGTCTTTATCCTTCCTAAATGGGTGGTCTGCAGG
TAGAAACATCCTAGTACCCAGGTAGCATGCTTTGTGTCCATGTTTTAAAC
GTTTGGAACATGTACCCAGCAGGCAGTGGGAGCAAACAACAATACTCTCT
CCACTAAGAATTCCCCGGCCTAGCCAGTCACTAATTGTCCATAGCAGTGC
AACATACACCCTGAATTTCCTTCCTACATGAGAATCAAAAGTCCAAAGAC
CATCCTTCCATAACACTTTCAGTTCATCAACAACTAGCTGCAGGTAAATG
TCTATTTCTTTCCCTGGTGCCTTCCTACCAGGAATAATAACTGACAAAAT
GAAGTTGTTTTCTTTCATGCAACTCTCTGCTGGAAGATTGTATGGAATCA
GTACAATTGGCCAGATGCTGTAAGATAGGTTCATAGTTCTGAATGGATTG
AAACCATCAGTTGCCAGTCCAAACCTAATATTTCTAGCTTCTTTACTGAA
CCACTCATATTTTGCATCAAAATGCTTCCAAGCTGGTGCATCAGCAGGAT
GCCTCATAAGACCATCCTTGATCCTACCATCAACATGCCAACTCATAAGT
GGGGCTGTGTTGCTTGACATGAATAATCTTCTAATTCTCTTCTTCAATGG
GAAATGCCTGACCACCTTTTGAGCAACCTTGCTAAATCTTTTGCCACCAC
CAATTTCCTTCACAATCTTCCATCTGGATGCATTACATACTAGACAGACA
GATGCATTGATATTGTCTCCTCTATATATGATGCAGTCATTAATGCATGC
ATCATATGTGTCATACCCCAGCCCTACAGATTTGATGTACTGTTTGGATT
CATGAAAATTCATAGGGAGAGTTGTATCCTCTGGTAGGACATCCCTAAAT
AGCTGCAGCACATCTTCAAATGTAGTTCTGGTTAATCCCCTGGTGTTCTT
TATGTTCATCAGCTTCACAAGAAATTGCAGTTTTGTAAATTTTTTACATC
CTGCATATAATTCTTGTCTGCCATCATTAACTAACTTTTTGAATGCCTTA
GCTTCTTCATCAGCTTCATCTGTTTCTTCAGAGTCATCATCAGTATCATC
ACTGTCAACTTGTGTATCTGATCCTAAAGAGCTATTGTTGTACATATCAT
GAGAACCCAACATCATCTCATCCATCTCATCACTTCCTAAAGGCAATTCT
ACTGATTCATTGGGTTGTACAGTAGGAATAGCACAATCTACTAATTCCCC
ATGGTATACCCATGTTGTATACCCAGTCATGAATCCTACAGATATTATAT
GGTCTTCAACATCTTCTAAACTTTGCCTAGAGATGTTACAACAAAGTTTG
CATGGGCAGACAATCTTTTGGCTAAAACCAGAATTTGTAGCTGCAAACTG
AATGAAACCCCTAACCCCATCTGCAAACTGTGTACTGGATCTAGCAGCAC
TCATCCAAGTTTTATCCATTGTACAAATAGATGAATAAACTTAGCAACTT
GTTCCTGTGTAACCAATAGCAAGATACTAATTACTATACCAACATTCAAA
CAAACAAACTAGGTAATAACAGGAACAGTTCAGAGTACAGCATATCAGAG
CACATCAGGAACAGTTCAGAGTACAGCATAGCATATCAGAGCACAAGTAA
TAACAGGAACAGAAGAGGAACAGAGCATATCAGAGCAGAGCACAAGTATA
GCATATCAGAGCAGAGCACAAGTAATAACAGGAACAGGTGGTGAATTCCT
AACCTGACAAACCAGCCTCGGCATCATTGCGAGTTATTTGTCGATGAAGA
ATAGATCGACGTGGATCATCATTACGAGTGCCCATTGCATGACGTGGATC
TCGACGGAGAGGTGGTGGACGAGCTCCAGGCGGCGGCGGATCTCGACGGT
GGACGAGCTCGAGGAGGAGGTGGTGGTGGACGAGATCGACGGAGAGGTGG
TGGAGGATCTCGACGAAGAGGTGGTGGTGGACGAGCTCGAGGAGGAGGTG
GTGGTGGACGAGATCGACGGAGAGGTAGTGGAGGATCTCGACGGAGAGGT
GGTGGTGGACGAGCTCGAGGAGGAGGCGGTGGTGGATCTCGACGGAGAGG
AGCGGATCTCGTCGGAGGAGAGGAGCTCGATCGAGGAAGAGGAGGAGAGG
CGCGTTGTATCTGAAAAAAAGATAGCCAAGGTCAAAGAGAGAAACACAAG
GGTCAGTAACATGAAATGAAAAAATTAAAGGACTAAAATGAAAAAATTAA
AGGACTAAAATGAAAAAATACTGTACTGGAGATATACTATACTTGTGTTA
TTATTGTGCTTTGTTCCCTTCTAGTTTACATTGTTGTCTAGCTAGTGATA
TTTTATTTTAACAGTAATTGTCTAGCTAGTTTATACATAATCATAATCAT
AGTTTAAACATTCATAATCATAATCATAGTTGAATATTGTAAAACTAGAC
ATTGAGATGCAAAACTAAATATTGAACATTTAGATGCAAAACTAAACATT
GAGATGCTAAATATTGAACATTTAGATGCAAAACTAAACTTTTAGATGCA
AAACTAAACATTGTAGTCTAGTTGCCCATGGTCTGAATATTTATGAATTC
AGAACAATGAAGGCCTCCTAGACATAAAATTAAATGATCAACACTAGATA
AACAGAAAATCAAGAAACTGATCAACACTTGAAAAACTGAGAATCATCAA
CACTTGATAACCAACATTACAAACCATTGTTCAACTTACAAACCAACATT
ACAGTAGATGCATTGTTCAGAACACTAGTCCACTAGAACACATTACAACT
TAAAATGAAACACAATTTCTTCAAGGGTCTTCAATCATGTTCTTCAAGGG
TCTTCAATCTCCACAAAATCAAGGCAGATGTGTCCATGCCTTGGGTCTGC
AACAATCAGCAACAGTGATCCCTCTACTATATTTGCCTCCTCCCTAAATT
GCTGCCATCCTATTGTGAATGCAATTCTATCATCTTCATCTTCCATGTGG
TACCATCCTTCAAAGGGCACATCAAATTCCCTAGCCAACAGATTTGAATG
TCCTTGCCATGGGCATCCAACTTCTCTGAATGTTTTTGCAGAAAGGTACT
GGCATAGTAACAACTTGTGTAAGAACTAAGTCTGAAACATTGCATAAAAA
AAGTGAGAAATTAAGTAGTAGATAGTTACCAAAGCATCTAGTTCAACATT
TTCCTGATTATACTTGTGCACCATAAACTGCATCTCATTGACACTTTCAT
AGAATTCTTCCTCAGCTAGTTCTTGCCCTGGTTTTAGAGCCAAAACCTTG
TAGATACCATAATTGATGGTTGCCATGTTCTCCTCACTAATTTCTCTGAT
GTTTGAGAAAATAGTCTTCTGAAGTATAGCTCTAATTTCAGGCATCACAC
AGTAAAGACCTTCTCAAAGTAGTAAACAATGGCAAACTAGTTAACATAGC
AAGTCTTTCAGCTAACATGACATAAAACAGTTAAAATTGTGAAACAGTTT
ACCTCCATCTGCAACAATAGGCTTCTCAACCTTCATATTGTCCACAAATT
CAGACACTGTGATATCAAAATTGTTGGCCTGTTCCACATACCTGAAAGAG
ACAACCTCACCTTGCTGGATATCATATTTCCTAACGAGGGAACTCCAGTA
TGGTCCACAGATGGTAGTTCTTGACACTTCTTTCTCCAGGAAGAAGTCAT
ACACATACCTGTTCCTGCATGTAGCCACCATCCAGTTCTTTAACATTGCA
AATTTTTCAAGTTGTTCCTTGAATTTGCAAGGTACTGCCTGAAATAAAAA
CAAGAGGAATGTTTGTCATTATACACCTCCTTTCCAGATAAAAACAAGAG
ATCCATTGTACTGA

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