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GrainGenes Sequence Report: AA031113

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Sequence
AA031113
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA031113
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
TTTCTAAATAAAGAGAGTAGAAGGGGTGAAAACTGCAATACAAAAGCTTG
TAGCGGAGACGGTAAAAACTACAATTTTCTCCATGTGCTGTGTTACGTGC
GCAGAGGATGTGGAGGAACACGGCAAGATAAAATCTGGGCCACCATGATC
CGACCTTCCAAATGGAATCGAGCGATTGGCCACGGCTCGTCGTCCCCTCA
CCACCACCAGTCCCCCCTCCCCTTGGCAGCTTCACTCCCTCTCCACAAAC
TCGGAGCCCCAAAGTTCTAGAAGCAACGAAACGCAGCCTTACAACACCTC
CCCTCCGGCCACAGCTCCCAGTTGCCCAACGCATTCTCCTTCCGCAAGCC
CGCTTGAGCTCGGACCAGTCGACTCGGGGTTCATGCCCATGGCGCTCCTC
TCCGCCACCTCCGCCGCGAAGACGCACCTCTTCTGCTGCCACGAGGAGCA
CCCGGCACCGCACCACCAGAGCGGCGGCGGCGGCGGCCTCCTCCTCTCGG
CCCCGCAGAGGCAGAGGGCGGCCCGCGGCGCCAGGCTGGTGGCGGCCAAC
GCGGCCGCCGCCGCCGAGACGGCGCCGGCGCCGACGACGAGCGGCGGTGG
CGGCAGGAAGCCGAGGGTGCTGGTGGCTGGCGGCGGCATCGGCGGCCTGG
TGTTCGCGCTGGCGGCGAGGCGGAAGGGGTACGACGTGACGGTTTTCGAG
CGGGACATCAGCGCGGTGCGCGGGGAAGGGCAGTACCGCGGGCCCATCCA
GATCCAGAGCAACGCGCTGGCGGCCCTGGAGGCCATCGACATGTCCGTGG
CCGAGGAGGTCATGCGCGAGGGCTGCGTCACCGGCGACCGCATCAACGGC
CTCGTCGACGGCATCTCCGGCTCCTGGTACGCCGACTCGAGTACTCGACC
GCCGTGCTTGCTTGCTTAAATAGTTTGACATCGTGCTCTCCTGCTCTGCT
TCTTTGGCCTTTGCCGGTGTGTAGTGAACTGCTCCTAATCAGGGCTAGTA
GTAATAATTGTGTAAAGTGCCGTCACGTAACCAGACGGCGGGGTACGGGA
GGACGCACCGAAAACATGTCCATTTCCCCGTCCGGGTAGCTGCTCGACAC
AGCGCCTCCCACGGAAAGCCGCCCCACCCAGCAGGGCACAGAGGAAAGAA
GCCCGACATAGTTGCTTGGATAATTGGTTGACCACCTCCGCGCGTCGCCT
TTCCATTCGCCCAGCCAGGTGCTCTGCCCGTCGCCGCGCCGAGCAGCGGC
CGCCACGTACCCCGACCGCCCAGACGCACCGAGGGACGGGCACCAATCCT
CGAGCGCACGTACCTGTTTCGCTTTCGCCACCACTACCACTGTCCGTCCA
AGAGCGACGTGCACCGCCGACTCGGCCCAGAAATCCCTCCGTTTCAGTGC
CCGGTGCGCGTGTTCCTCGTGTCGGCCCCCGTAAAATTCGTTATCCCGGC
GCGATTCCGCCCAATGAAACCATTTCTGCGCGTGTTCGCGAGTACCGGAG
CCCCGCCACCCCCATGTGTTTCTCCTTGGCCAGTTGCCGCCCCATCCCGA
TCCCCAGGCTAGCTAGCTAGCACTAGCACTACCAGCCTGCCTGCCTGCCT
GCCTGCCTGCCGAGAAGATCTTTCCCTTCCTGTAGAAAAGCCAGCCCGCC
TGCGAAAAGCTCCAGGTGCATTTGCAGCTCGAGCGCATGTCCCCTGAGTT
GACCGACTTTGCAGAGGGCAGTCAGTACCGACCACTCTCTGCTCATCCCA
AACATAGCAGCTTCCACTTGCCATGGCAAGCTCAAGCTGCACGCGCGCCT
CGCGCACGGCGATCCCATCCACCTCCTCCCGAGCTCTTCGCACACCCACC
GTCCACCCACGTCGACGCGCGCTTCGCGTTCCTGGCCCCATCAGGTGCGC
GTGTGACCAGCCCATCGACGCGGCAATGCCCGCGCCGGCGCCGGAGCAGC
GCAGGCCGCGCGTGCTGGTGGCCGGCGGCGGGATCGGCGGCCTGGTCTTC
GCGCTCGCCGCCAGGCGGAAGGGCTTCGAGGTGCTCGTGCTGGAGCGGGA
CGTGAGCGCCGTCCGCGGGGAGGGCAGGTACAGGGGGCCCATCCAGCTGC
AGAGCAACGCGCTCGCGGTGCTAGAGGCCATCGACATGCCCGCCGCCGAC
CAGATCATGGACGCCGGCTGCATAACCGGCGACCGCGTCAACGGGATCGT
CGACGGCGTCACCGGCTCCTGGTAATTATAATTAACCGAGGAGTCAAAAG
TCGTTCTAGTGACAGAGCCGGCTGCTTTGCTTCTTACTATATAGGATTCG
TTTGCTTGAGCGTTGCGCCTAGAAATGTTGGAATTTCTCTTTGGCTCTAC
TTCTTTTTAGGGAACTTCTTGTGGACTTTAGCGCGAGAAGAAGACTTTGT
TCTCACTTACAGCAACGGCACTTGGCACAGCCCGATTGGCACATCGTAGC
AGCCCACATTAGAATCGTTAACCATAGACCTACAGTGTCAATGATAGCAA
CACAATTGGATGAACAATTGAAATGTAATCTGTTGCCTACTATTGATGTT
GATTTGTATGTTTCAACAAGTACGAACTTGCGCTTGTTCTACTGCATTTT
TGAATTTGCTTGTTTATCAGCTTTAAGATCACTACTCGTTTGCCGGGCCC
CCGGGGGCATCCATTTGACCGAGTCATGTTGGTATGCAGGTACATCAAGT
TTGATACATTTACACCTGCAGCTGATAGAGGGCTCCCGGTCACAAGGGTC
GTTAGCCGCATGACACTGCAGGAGATTCTTGCTCGTGCCGTCGGGGATGA
TGCTATAATGAACGATTGCCATGTAGTTGATTTTACAGACGATGGCGACA
AGGTGAACGAACAGTTGGGTTTTAGTTGCCGTCTCAGTACAAGATTGGCT
CACAGAACTTTAATGCTTGTATCATTTACCGGAGGAATGCAGGTTACTGC
CATACTGGAGGATGGGCGGAAATTTGAAGGCGATCTTTTGGTTGGTGCGG
ATGGCATATGGTCAAAGGTAAATGTAGTTACTTGCCTTGTCAAAAACCTG
ATTGAGATATCTTTTTTAGGAGCCTTAATTGAGATTTTCTTCAACTCATA
GGTGAGGAAGTCGCTTTTCGGGCAAACAGAAGCGTCTTATTCAGAATACA
CTTGCTACACCGGAATCGCAGACTTTGTGCCTCCGGATATTGACACAGTT
GGGTATGTGACCTAGATCCAACAATGAGTACAGTTGTTTCCTATGTTGTT
AGGACATACTCACGTGCTCATCTTGTTTCTCTGTTGAAGGTACCGCGTGT
TTCTTGGCCACAAACAATATTTCGTATCTTCAGATGTTGGTGCTGGTAAA
ATGCAGTGGTATGCATTTCACAAGGAACCTGCTGGTGGTACTGATCCTGA
AAATGGTGAGTGCCCAGAATGGAACTTTTGCGCTAAATTAGTTAAATTGA
ACCTTCCTCGTTATGGTTACGATTCGAATGATGGAAGTAATTTGATATGC
CTTTTGTCCTTACCAATGTTTTATATTGACAGGCAAAAAGAAAAGGTTGC
TCGAGTTATTTAGCGGTTGGTGCGATAATGTCATAGATCTGCTAAATGCA
ACTGACGAGGAAGCAATTCTTCGCCGGGATATATACGACCGGCCACCTAC
TATCAACTGGGGTAAAGGTCGTGTCACCTTGCTTGGTGACTCTGTTCATG
CTATGCAGCCAAATCTGGGCCAAGGTGGCTGCATGGCTATTGAGGTACAG
AATTACTTACTCACCCATAGCTATGTGATATCATCGTCACTATCAGTAAA
TCGGCATGTGGGATGGGTTTCTTCCCTTGGGGTTGTCAGATATAGTACTT
GCTGATCTGAAGTAACTTCTATCACTTGTTTTTACAGGATGGTTACCAGC
TGGCTGTAGAGCTTGAGAAGGCCTGGCAGGAGAGTGTGAAGTCTAGAACT
CCTGTGGATGTTGTTTCCTCCTTGAGGAGGTAACTATTTCTTTCCTTCCG
TTGTAACATGTTAGTTTTATTAGATGGTATTGCTTTTAGCATTCATTGGC
ATACAAGATTATATTTCAATTGAATCCAGCTCCAATTTTTTCCTATTATT
ACATTTAGTTTTTTAGTTGTAGTCCTTAGCAGGTTGACTGATGAGTAATG
GGCACAATTTTCATTTCAATGTTTGGCTGCAGTTATGAGAAGGAGAGAAG
GCTACGTGTTGCTATTATACATGGATTGGCAAGAATGGCTGCAATCATGG
CTACCACTTACAGGCCATATCTGGGTACAGGTCTGGGACCGTTGTCGGTA
CGTCAAGAACTACACAGTTTTGTATTTCTGAACAAATTTAGTTGGATTTT
GCATGTCAGCCAGAATAAACTTGTTGAGTACGCTACCCATGATTTTATTG
AATTTATGAATCAGTATTTTAAATTAAATTACCGGTGTCACAAGAGTATT
ACCGAATAATGCAGACTAAAATTCTATATATGGATATTTGTTACATGTAG
TTTTTGACAACGTTGAGGATTCCGCATCCTGGAAGAGTTGGCGGGAGATT
CTTCATCAAGTTTGGAATGCCTTTGATGCTGAGCTGGGTTTTAGGTGGCA
ACAGGTGATTATTTTGACCTATAACATTCATTTCGATGTCATATGTAAAT
AGTGTTTTTATGGAATCTGTAAAAAAGTACTTGATATGTATTAGTGTTAG
AGGCATCACTACACATAAAAAAGTCTTCCCAATTGTTTCTTCTTAGTCTC
TATATTGATCGTATGGAAATTGGAAATAAAATTTGTATTTGATATACAGC
TCAAAGCTAGAGGGAAGACCATTAAGTTGCCGGCTTTCTGACAAGGTATG
TTCATAGAAGACATGTAAAAAGATAAATGGAGAACTATGTGACCATTTCT
GACATTTTGCATCCAACTGTAGGCAAACGACCAGCTTGGTCAATGGTTTC
AGGATGACGATGCATTGGAACAAGCTATGGGTGGAGAGTACGTTCATTGC
TTGTCCTCTGGTTCCAGTTTGAGTCAAATATGTTCCGTGTGCTCTCAGCA
CCTTTGAAAAGGGTACTTATCTGAGTAACACTATTAACAGGTGGTACCTC
TTCCCTATGAGCTCTGGAGACAACTCTACCTTGCAGCCCATTCGTTTGAT
CAGGGACGAACAGAGGACAGTCTCTATTGGGTAGGTGTACATAACAAGAA
TGTTCCTCTTTATACCGCACTTTGTTTTTTAAGGCATTACTGAATAGATA
AATTGTATGTTTATTTTGCAGTAGCCGACCAGATCCCAGCAAATCCGAGT
CTTCCTTGACGTTGTCTTTGCCACAAGTGAGTAATCAAAACAATGTGGCA
ATTTTGTAGCGTGACCCGTTTCTTACTTGCAACCTTTATAATGTTGTATC
TACATGGCTGCACTCAACAACTTTGATCTGTTGAACTTCATTACAGGTAT
CAGAAATCCACGCTACTATCACATGCAAGAATAAGGCCTTCTATTTGACC
GATCTCGGAAGCGAGCACGGTACATGGTTTAACGAGTAAGTTCTGAAAGC
AGCCTGATTCTATTCTCTCGTGCTAGAATTCTAATATTTACACCTAGATT
CACTCATTTCCATGTGGACTCTGCAGCAATGAAGGTAGACGTTACCGCTT
ACCTCCAAACTTTCCAGTTCGATTCCACCCCTCCGATGCAATTGAGTTTG
GTTCAGATAAGAAGGTAGTCGTCGTGTCTCCTCTCGTTTTGTCCTTAACT
TGGTTTACCTCTCGTCGTGTCTGATGATCAAACTAATGGCCAATTGTCAT
AAAATGCCCATTTCTGCATTCAGAACTCTGACACAATGTGTACAAACTTG
CAGGCAATGTTCCGGGTGAAGGTGCTGAACACTCTCCCATACGAATCAGC
GAGGGGAGGTGGGGAAGTTCTGCAGGCAGCATGAATGGAGACTTCAGTGA
AACCCCTGTCATTAGCCACTGTACAGCATTCAGTAAACAGCCGACATTGC
ATCACAGAAAGGAGATAGCTGCCAAGGAAAGAAAAACGATTTGTAAATTT
TGCACTTCATCCAGATATCATACAGGATTTTGATTAGATTCTGACAAAAC
TACGTTGCAGTTCTATGAAAAAGAACTGAGGTGTACAATAGGGATAGGCA
ATTTTAGACGTTGCCACTGTAATACATTGTTTGCTCTGTTAACACATGTT
CATACTGCAGATAAAAGACATGTTAGTATTGTACCATCAAGGCGGAAGTA
ATTACAACATGAACATAATTGTATAGTATTGTAGTGTTTACACTTGTATA
ATTGTTTTGGACTCTTAAAACTTGTATAGTCTGTAGTACTTACACTTGCT
TGTACTATAATTGTTTTGGGAGAGCGAGACGCCACGCTTGAGAGTTGAGA
CGAGGTTGGGCCAAGGAACTGACAGAGAAGTATCTTCAGCAGTTTATCCT
CCGGATCATAGCAGCGGATAACAGCCACGCGGTGGTCTCCGGCGCGCTCA
CCGTGAAACTTCGCCGCGGCGGTGATCGCCGTCGAGGCGAGGGGATCTGG
GGAGCAACTTCCCATAGTAGCCCCCAGACAGTAGGATTCCACAGCCGTTG
GATCATTCTTCTTTGGCCCAGATTTACGCGGCAGGCATATTACTCCACCG
GTACTGCGGTACACGCCGAGAGTGAGGTGTCTGTCCTCGTAAGCCATGTC
AAACCGCGCCGCGGCCGCCGGCGAAGGCGGCCGCCGCGAGACCCTAGCCA
AGGTCTCCCTCTCATCGGCCTCGGCCGCCGCGGCGGAGGTTTCCACCTTC
CCCATCGACGCCCTCAAGATCCGCCTCCAGCTCCACCGGAGCCCCGGTGG
CGGCGGCGGCGTCTTACGCGTCGCGGGCGAGCTTGTCCGCGACGGGGGCC
TCTACCGGGGCCTCTCCCCCGCTATCCTACGGCACGTCTTCTACACCCCG
CTTCGCATCGTCGGCTACGAGCACCTCCGGTCCTCCCTCGCCAGCGGCGG
CCGGGAGGTCGGCCTTCTCGAGAAGGCGATTGCTGGGGGAGTCTCGGGCG
TTGCCGCGCAGGTAACATGTCTCTGAAGATCAGATCCGCCCTGTTACATC
AGATACTCTGATCCTTTGCGCTGAGGCGTGCAAGAGTTTATGTGGGATTA
GTTAACCATAGAAGCTTTTTAGGATAAAAATCATGGAAGTTTTGAATTTT
TGATTTGTGCTAGTCTACTAGGACTCTAGGAGGAGGTAGATTTTATGAAG
TTAGAATATATTCCGAAACTAGCAATATGTTGGATATCATGACGATCTAT
TGAACATCCAATCGTGTTAAATAATCATTATTACTACATCTATGGACAAA
ATTACACTGTTAGACATTTATCTTAGTGTGCTAATAGTCTATAGTTTAGG
TCCGCGTCTCCTTTGCTTAAAAGAAAAACAGCACACACAGCTCCTGCTCA
TTAGTCATTATTGACTTATTGAGAAAAGGCATACATCTTGGGCAACAATA
AATAGATTTTAATCTCCGCCCTTAAATCACAATGCTCACTGTTTGGTTTC
AAAGTGAAACATGCTTGCATTGAAAAATGGAAAACTGCAAAATCATACTG
AAATAGACATCCGGATAGCCAAATTCCTGAGATGGGGTATTTTTTATGGC
CGGTTACAAAATTGTGAATATATCTGAACATTATCATCGATGCTTGATTA
TTCTTTCCCTCGAGTCCAGGACCAAGCAAATATATATGGCCAGCAGTTCA
AAACACTCCTTATCTGATAATTGTATTCCCCAAAAGCATGACATTTGTAG
AATGAAAAAGACATTTAGTGATCAGCATGGCTATCTGTTCGAAGTAGAAC
TGTGGTATATTAACAGTTGCAACTATTTCTTTGCCAAATACATCACTATC
TAACACAATACTTAATGTTCCTACTACTCTGCAGTGCAGGTGCTGGCCAG
CCCTGCTGACCTGATAAAGGTAAGGATGCAAGCAGACAGCAGATTGTTGA
GCCAAGGCATTCAGCCACGGTATACAGGAATCTTAGATGCCTTCACAAAA
ATCATGCGTGCTGAAGGCTTGTTAGGACTTTGGAAGGGGGTTGCTCCTAA
TGCCCAGCGAGCATTTCTCGTCAACATGGGCGAGTTGACCTGCTATGACC
AGGCAAAGCATTTCATCATTCGCAAGCAGATCTGCAACGATAATCTGTAT
GCTCACACATTGGCCTCTGTTGCCTCTGGTCTATGTGCGACTACATTGAG
CTGCCCAGCGGATGTGATCAAAACTAGGATGATGAACCAGGGCCAGGAGG
CAAAAGCTCTATACAGGAATTCTTATGATTGCTTGGTCAAGACCGTCAAG
CACGAGGGTGTAACAGCATTATGGAAGGGTTTCTTACCTACATGGGCCAG
GCTTGGCCCATGGCAGTTTGTGTTCTGGGTTTCCTATGAAAAACTGCGAC
AAGCATCAGGTATTTCGTCATTTTGACAGTGTTGGCTGAGTTTTCATACA
GGAGGCATTCAGATCAAAGAAATTGCTATTTGTGAACTTGTAGTCTGTGG
CTACATATTACATAGTCCATGATCCCTTACGCTTAATTTGGGCTTCTGCT
CATAAATTCGACATTTTGTCATGCTTTTCCTTTTGGGTGCTATTTATGTA
CTACCTATTGTGTTCAACAATTGAAACGGTTGGCCTTTTTGTTGACAACA
TTTTTTTCTGTTCGTG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.