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GrainGenes Sequence Report: Ta.30743.1.S1_at

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Sequence
BE424523
Contig
Ta.30743.1.S1_at
NSFT03P2_Contig16695
Tracefile
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External Databases
Data at GenBank
Data at EMBL
Data at DDBJ
TIGR Gene Index
TC319559
wEST map position
BE424523
NCBI UniGene
Ta.54454
DB Remark
Locus Source: Triticum aestivum (bread wheat)
UniGene title 'Transcribed locus, strongly similar to NP_001054405.1 Os05g0104800 [Oryza sativa (japonica cultivar-group)]'
Keyword
EST
Germplasm
CHEYENNE
Species
Triticum aestivum
Cultivar
Cheyenne
Chromosome
6AS
6DS
Clone Library
Wheat endosperm cDNA library
Tissue
Endosperm
Developmental Stage
5 to 30 days post anthesis seed
Data Source
genbankRelease 135, Apr 15 2003
genbankUpdated Nov 2006
Title
WHE0086_H10_P20ZS Wheat endosperm cDNA library Triticum aestivum cDNA clone WHE0086_H10_P20, mRNA sequence.
Other Name
WHE0086_H10_P20ZS  [ wEST-mySQL (obsolete) ]
Strain
lab_host E. coli SOLR
DNA Library
TA001E1X
Clone
WHE0086_H10_P20
Probe
WHE0086_H10_P20
Remark
DB_xref: taxon:4565
Feature: source: mol_type = 'mRNA';
Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; Sequence have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20; Seq primer: Stratagene SK primer.
Note: Vector: Lambda ZAP II, excised phagemid; Site_1: EcoRI; Seeds collected, endosperm isolated, and RNA prepared by Susan Altenbach. Library constructed by Stratagene, Inc. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab.
DNA Homology
Ta.30743.1.S1_at803WHE2AFFY
Ta.30743.1.S1_at476WHE2AFFY
DNA
acttggataacaggtacaaaaatgcatattctgacaacatattctgatct
ctcattcaagcaaacgaaaaccaagcacagatgctgtcacggcatggagt
tggcagctacccaaacaacacatgaatcacaggacttgggcggcggtgtt
cagcttctcggcgaccgcgatctgagtccgtgtgatgcttgacaggtata
ccagcgcaagattgtcctgaatcttgtcattgaagagcctgtcaaaagat
gctggagacagctttggcatggaggagacggtgtcagcaatgaacctgcc
tatcttgttgtctggtgccacacgagcttccacaacatcatcaacatatt
tgtagatctcgtcaataagagcatatagattttgcattgaagactccatt
ccttccaaatcgttggggagcttctccaccatcgtagatttcagcatttc
aaatccaactttttctgcatcaagcatcttc

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