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GrainGenes Sequence Report: BE424017

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Sequence
BE424017
Contig
Ta.28822.1.S1_s_at
NSFT03P2_Contig11059
Tracefile
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External Databases
Data at GenBank
Data at EMBL
Data at DDBJ
TIGR Gene Index
TC296117
DB Remark
Locus Source: Triticum aestivum (bread wheat)
Keyword
EST
Germplasm
CHEYENNE
Species
Triticum aestivum
Cultivar
Cheyenne
Clone Library
Wheat endosperm cDNA library
Tissue
Endosperm
Developmental Stage
5 to 30 days post anthesis seed
Data Source
genbankRelease 135, Apr 15 2003
genbankUpdated Nov 2006
Title
WHE0068_A05_A10ZS Wheat endosperm cDNA library Triticum aestivum cDNA clone WHE0068_A05_A10, mRNA sequence.
Other Name
WHE0068_A05_A10ZS  [ wEST-mySQL (obsolete) ]
Strain
lab_host E. coli SOLR
DNA Library
TA001E1X
Clone
WHE0068_A05_A10
Probe
CFE16
CFE17
Remark
DB_xref: taxon:4565
Feature: source: mol_type = 'mRNA';
Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; Sequence have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20; Seq primer: Stratagene SK primer.
Note: Vector: Lambda ZAP II, excised phagemid; Site_1: EcoRI; Seeds collected, endosperm isolated, and RNA prepared by Susan Altenbach. Library constructed by Stratagene, Inc. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab.
DNA Homology
Ta.28822.2.S1_at412WHE2AFFY
Ta.28822.1.S1_s_at410WHE2AFFY
Ta.28822.1.S1_s_at133WHE2AFFY
Ta.28822.1.S1_s_at72WHE2AFFY
Ta.28822.1.S1_s_at159WHE2AFFY
DNA
cacagctccaataaacacagacatcaacaccgaaatgttaagactacttg
cacaacgcaggaaacaacattagaagttcaatgttctaccctatgagaca
tcaaaccaccacgacacagaagctacataggtcggtgtgtaccagacccg
ctcaatcatcatctagacagcagataaactaagggactgaaacacgacag
caggaaagcagatcatttcttcttcttggccggcggctggtcctcatctt
cctcatcctcctcatcgtcgtcctcgtcatcatcatcgtcgtcctcgcca
tcttcaccatcatcatcgtcatcatcaccatcatcatcgtcgctccccgc
accagcgtcatcgccgttcgcctcagggtcctcgtcctcgtcatcgtcct
caccttcttcacccgagaagtcctccccagcatcagcatcatcatcatca
gcatcaccagtttcatcatcctcgtcttcatcatcatcgtcgtcgtcatc
agaccctgcatccttgttctc

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