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GrainGenes Sequence Report: BE423792

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Sequence
BE423792
Contig
NSFT03P2_Contig13448
Tracefile
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External Databases
Data at GenBank
Data at EMBL
Data at DDBJ
TIGR Gene Index
TC334724
wEST map position
BE423792
NCBI UniGene
Ta.30946
DB Remark
Locus Source: Triticum aestivum (bread wheat)
UniGene title 'Transcribed locus, strongly similar to NP_001053182.1 Os04g0493100 [Oryza sativa (japonica cultivar-group)]'
Keyword
EST
Germplasm
CHEYENNE
Species
Triticum aestivum
Cultivar
Cheyenne
Chromosome
2AL
2DL
Clone Library
Wheat endosperm cDNA library
Tissue
Endosperm
Developmental Stage
5 to 30 days post anthesis seed
Data Source
genbankRelease 135, Apr 15 2003
genbankUpdated Nov 2006
Title
WHE0074_E07_J14ZS Wheat endosperm cDNA library Triticum aestivum cDNA clone WHE0074_E07_J14, mRNA sequence.
Other Name
WHE0074_E07_J14ZS  [ wEST-mySQL (obsolete) ]
Strain
lab_host E. coli SOLR
DNA Library
TA001E1X
Clone
WHE0074_E07_J14
Probe
[Wcl760ct1604cn2177]
{SpCl-1370}
WHE0074_E07_J14
Remark
DB_xref: taxon:4565
Feature: source: mol_type = 'mRNA';
Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; Sequence have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20; Seq primer: Stratagene SK primer.
Note: Vector: Lambda ZAP II, excised phagemid; Site_1: EcoRI; Seeds collected, endosperm isolated, and RNA prepared by Susan Altenbach. Library constructed by Stratagene, Inc. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab.
DNA Homology
TaAffx.117198.1.S1_at287WHE2AFFY
[ Show all 7 ]
DNA
gcggcccctctctccccactccttccttaaaccccccataagccttgttc
ctttcccttctctctagctactcttgcagcctcgctcctcttctccagca
ggcctctccggctccaaacacgaacggtgaggaggcgccggagcaagctg
ccgtcgcggcgcgccactgccggtggagtcgagtctcgaagccggagtag
tggagatagagcttctgccccctctcggcggcgttgatcctctgcaggaa
aaaaggggcgaacgtacgcgtagccagcagcagtagcgggggaggaagat
gatgatgactcaagtggccaaccacagcaagaggaaccacaccgacagct
acttcagcgggaagcagcagcagcagcagcagcaggccggcgccaccacc
accagcggcggctcggaggagttcgcgggcatggggtccaagaagccgag
gaacgccagcccccggggcagcggcggccccatttctccc

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