Query (optional)   in Class  

GrainGenes Sequence Report: Ta.1531.2.S1_x_at

[Submit comment/correction]

Sequence
BE423600
Contig
Ta.1531.2.S1_a_at
Ta.1531.2.S1_x_at
NSFT03P2_Contig17958
Tracefile
[ Download ]
[ View ]
External Databases
Data at GenBank
Data at EMBL
Data at DDBJ
TIGR Gene Index
TC285037
NCBI UniGene
Ta.1531
DB Remark
Locus Source: Triticum aestivum (bread wheat)
UniGene title 'Transcribed locus, moderately similar to NP_001051862.1 Os03g0843300 [Oryza sativa (japonica cultivar-group)]'
Keyword
EST
Germplasm
CHEYENNE
Species
Triticum aestivum
Cultivar
Cheyenne
Clone Library
Wheat endosperm cDNA library
Tissue
Endosperm
Developmental Stage
5 to 30 days post anthesis seed
Data Source
genbankRelease 135, Apr 15 2003
genbankUpdated Nov 2006
Title
WHE0072_H08_O16ZS Wheat endosperm cDNA library Triticum aestivum cDNA clone WHE0072_H08_O16, mRNA sequence.
Other Name
WHE0072_H08_O16ZS  [ wEST-mySQL (obsolete) ]
Strain
lab_host E. coli SOLR
DNA Library
TA001E1X
Clone
WHE0072_H08_O16
Probe
[Wcl853ct1717cn2301]
{SpCl-285}
Remark
DB_xref: taxon:4565
Feature: source: mol_type = 'mRNA';
Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; Sequence have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20; Seq primer: Stratagene SK primer.
Note: Vector: Lambda ZAP II, excised phagemid; Site_1: EcoRI; Seeds collected, endosperm isolated, and RNA prepared by Susan Altenbach. Library constructed by Stratagene, Inc. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab.
DNA
atacacagctggatgagttgccgcgaagaacactgagcaccgaaacataa
aaacgcggacgatgttgggatgatgccatcaacaaagataccataagcta
gagtaaagagttcagctggatcctccctggctccctgcttgactttctgg
tatgttcagtaacagcacttcactcctcgtcatcgtcgtcgtccttcttg
aggcgagtggttccgccgaccttgtcgatgggcagcttcatgttgccaaa
gggtgtgtcgacatcgatcttgcccttgatgctgtacccagttcccctgc
ccctgatcatgtcccagacggcagatcccangtccttgggcctgaaggtg
aatgggatctgcatcttggtgatcccctgcttctcgatcctggtggactc
ggtgagctccgcctccaccacgctgtcgtcgccgagccacatctggtact
gcagc

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.